Pregenerated sensors for LINC02279 (Homo sapiens)
Ensembl gene IDs: ENSG00000258933Ensembl transcript IDs: ENST00000553435.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCTTGGCCTTGTCTCAGCAGACACTGCCTAGCAGCCTCAGGGTGTaGCCCGAGGCAGACAGCCTGATTGTCATCACTCATCAGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: ALALSQQTLPSSLRV*PEADSLIVITHQQA Trigger: CGCCTGCTGATGAGTGATGACAATCAGGCTGTCTGCCTCGGGCCACACCCTGAGGCTGCTAGGCAGTGTCTGCTGAGACAAGGCCAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 90 bp | CCTGGTGCATATTTCAGAGTTGAAATGAAAGGCAAGAGGTGGGCTTaGCGAGGACCGGATAACCCCGGAGGAACTTCGCCAGTAGTCACG | + |
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Preference number: 5 (lower is better) Translates to: PGAYFRVEMKGKRWA*RGPDNPGGTSPVVT Trigger: CGTGACTACTGGCGAAGTTCCTCCGGGGTTATCCGGTCCTCGCCAAGCCCACCTCTTGCCTTTCATTTCAACTCTGAAATATGCACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 90 bp | AATTTGCCTGGTGCATATTTCAGAGTTGAAATGAAAGGCAAGAGGTaGGCTTGGCGAGGACCGGATAACCCCGGAGGAACTTCGCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: NLPGAYFRVEMKGKR*AWRGPDNPGGTSPV Trigger: TACTGGCGAAGTTCCTCCGGGGTTATCCGGTCCTCGCCAAGCCCACCTCTTGCCTTTCATTTCAACTCTGAAATATGCACCAGGCAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS TCA 90 bp | GTCAATGTTTGTGGAATTTGCCTGGTGCATATTTCAGAGTTGAAATaGAAGGCAAGAGGTGGGCTTGGCGAGGACCGGATAACCCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: VNVCGICLVHISELK*KARGGLGEDRITPE Trigger: CTCCGGGGTTATCCGGTCCTCGCCAAGCCCACCTCTTGCCTTTCATTTCAACTCTGAAATATGCACCAGGCAAATTCCACAAACATTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS TCA 90 bp | GTCAGTACTATAGCACTGAGGCTGAGCCTCGAAGCCATCAAATCATaGATTGGCAACTGCAGGTCACACCATTTCCCCATCTCTTCAATA | + |
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Preference number: 5 (lower is better) Translates to: VSTIALRLSLEAIKS*IGNCRSHHFPISSI Trigger: TATTGAAGAGATGGGGAAATGGTGTGACCTGCAGTTGCCAATTCATGATTTGATGGCTTCGAGGCTCAGCCTCAGTGCTATAGTACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 90 bp | ATAAAGTGGCCTCTGAGGATTACAGTAGGGTTAAATGAGGAAATGTaGACCAATTCCTCAACATGGTTCTGGACCTTGGCAAGGGTTCCG | + |
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Preference number: 5 (lower is better) Translates to: IKWPLRITVGLNEEM*TNSSTWFWTLARVP Trigger: CGGAACCCTTGCCAAGGTCCAGAACCATGTTGAGGAATTGGTCCACATTTCCTCATTTAACCCTACTGTAATCCTCAGAGGCCACTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 90 bp | CCTCAACATGGTTCTGGACCTTGGCAAGGGTTCCGTCAATGTTTGTaGAATTTGCCTGGTGCATATTTCAGAGTTGAAATGAAAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: PQHGSGPWQGFRQCL*NLPGAYFRVEMKGK Trigger: CTTGCCTTTCATTTCAACTCTGAAATATGCACCAGGCAAATTCCACAAACATTGACGGAACCCTTGCCAAGGTCCAGAACCATGTTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 90 bp | GTCCTCTTCACTCCTCTGGATTTCTATAAAATGGAAATGATAAAGTaGCCTCTGAGGATTACAGTAGGGTTAAATGAGGAAATGTGGACC | + |
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Preference number: 5 (lower is better) Translates to: VLFTPLDFYKMEMIK*PLRITVGLNEEMWT Trigger: GGTCCACATTTCCTCATTTAACCCTACTGTAATCCTCAGAGGCCACTTTATCATTTCCATTTTATAGAAATCCAGAGGAGTGAAGAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CAA 90 bp | CAGGCCCCCAGTGGGTCTGCCCAGAGCGAGCAGCCCGCCTTGGCCTaGTCTCAGCAGACACTGCCTAGCAGCCTCAGGGTGTGGCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: QAPSGSAQSEQPALA*SQQTLPSSLRVWPE Trigger: CTCGGGCCACACCCTGAGGCTGCTAGGCAGTGTCTGCTGAGACAAGGCCAAGGCGGGCTGCTCGCTCTGGGCAGACCCACTGGGGGCCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CAA 90 bp | GCTCCACAGGCCCCCAGTGGGTCTGCCCAGAGCGAGCAGCCCGCCTaGGCCTTGTCTCAGCAGACACTGCCTAGCAGCCTCAGGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: APQAPSGSAQSEQPA*ALSQQTLPSSLRVW Trigger: CCACACCCTGAGGCTGCTAGGCAGTGTCTGCTGAGACAAGGCCAAGGCGGGCTGCTCGCTCTGGGCAGACCCACTGGGGGCCTGTGGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CAA 72 bp | GCCCCCAGTGGGTCTGCCCAGAGCGAGCAGCCCGCCTaGGCCTTGTCTCAGCAGACACTGCCTAGCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: APSGSAQSEQPA*ALSQQTLPSSL Trigger: GAGGCTGCTAGGCAGTGTCTGCTGAGACAAGGCCAAGGCGGGCTGCTCGCTCTGGGCAGACCCACTGGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS GCA 72 bp | GCGAGCAGCCCGCCTTGGCCTTGTCTCAGCAGACACTaGCTAGCAGCCTCAGGGTGTGGCCCGAGGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: ASSPPWPCLSRH*LAASGCGPRQT Trigger: TGTCTGCCTCGGGCCACACCCTGAGGCTGCTAGGCAGTGTCTGCTGAGACAAGGCCAAGGCGGGCTGCTCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS GCA 72 bp | CTGACTGCAGACAGCTCCACAGGCCCCCAGTGGGTCTaGCCAGAGCGAGCAGCCCGCCTTGGCCTTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LTADSSTGPQWV*PERAARLGLVS Trigger: TGAGACAAGGCCAAGGCGGGCTGCTCGCTCTGGGCAGACCCACTGGGGGCCTGTGGAGCTGTCTGCAGTCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CAA 72 bp | AGTGGGTCTGCCCAGAGCGAGCAGCCCGCCTTGGCCTaGTCTCAGCAGACACTGCCTAGCAGCCTCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SGSAQSEQPALA*SQQTLPSSLRV Trigger: CACCCTGAGGCTGCTAGGCAGTGTCTGCTGAGACAAGGCCAAGGCGGGCTGCTCGCTCTGGGCAGACCCACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 72 bp | TTGTCTCAGCAGACACTGCCTAGCAGCCTCAGGGTGTaGCCCGAGGCAGACAGCCTGATTGTCATCACTCAT | + |
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Preference number: 6 (lower is better) Translates to: LSQQTLPSSLRV*PEADSLIVITH Trigger: ATGAGTGATGACAATCAGGCTGTCTGCCTCGGGCCACACCCTGAGGCTGCTAGGCAGTGTCTGCTGAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 72 bp | TATTTCAGAGTTGAAATGAAAGGCAAGAGGTGGGCTTaGCGAGGACCGGATAACCCCGGAGGAACTTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: YFRVEMKGKRWA*RGPDNPGGTSP Trigger: TGGCGAAGTTCCTCCGGGGTTATCCGGTCCTCGCCAAGCCCACCTCTTGCCTTTCATTTCAACTCTGAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 72 bp | GGTGCATATTTCAGAGTTGAAATGAAAGGCAAGAGGTaGGCTTGGCGAGGACCGGATAACCCCGGAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: GAYFRVEMKGKR*AWRGPDNPGGT Trigger: AGTTCCTCCGGGGTTATCCGGTCCTCGCCAAGCCCACCTCTTGCCTTTCATTTCAACTCTGAAATATGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS GCA 72 bp | TCCTCCCAGGGAGACTCCTCTCTAGGGAGACGTGCCTaGAGGAAGATGAAAATGGGAGATTTCTTGATGACT | + |
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Preference number: 6 (lower is better) Translates to: SSQGDSSLGRRA*RKMKMGDFLMT Trigger: AGTCATCAAGAAATCTCCCATTTTCATCTTCCTGCAGGCACGTCTCCCTAGAGAGGAGTCTCCCTGGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS TCA 72 bp | ATAGCACTGAGGCTGAGCCTCGAAGCCATCAAATCATaGATTGGCAACTGCAGGTCACACCATTTCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: IALRLSLEAIKS*IGNCRSHHFPI Trigger: GATGGGGAAATGGTGTGACCTGCAGTTGCCAATTCATGATTTGATGGCTTCGAGGCTCAGCCTCAGTGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 72 bp | ACTGAGGCTGAGCCTCGAAGCCATCAAATCATGAATTaGCAACTGCAGGTCACACCATTTCCCCATCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TEAEPRSHQIMN*QLQVTPFPHLF Trigger: GAAGAGATGGGGAAATGGTGTGACCTGCAGTTGCCAATTCATGATTTGATGGCTTCGAGGCTCAGCCTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS TCA 72 bp | TGTGGAATTTGCCTGGTGCATATTTCAGAGTTGAAATaGAAGGCAAGAGGTGGGCTTGGCGAGGACCGGATA | + |
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Preference number: 6 (lower is better) Translates to: CGICLVHISELK*KARGGLGEDRI Trigger: TATCCGGTCCTCGCCAAGCCCACCTCTTGCCTTTCATTTCAACTCTGAAATATGCACCAGGCAAATTCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CAA 90 bp | CATGGTTCTGGACCTTGGCAAGGGTTCCGTCAATGTTTGTGGAATTaGCCTGGTGCATATTTCAGAGTTGAAATGAAAGGCAAGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: HGSGPWQGFRQCLWN*PGAYFRVEMKGKRW Trigger: CCACCTCTTGCCTTTCATTTCAACTCTGAAATATGCACCAGGCAAATTCCACAAACATTGACGGAACCCTTGCCAAGGTCCAGAACCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CAA 72 bp | GAAATGTGGACCAATTCCTCAACATGGTTCTGGACCTaGGCAAGGGTTCCGTCAATGTTTGTGGAATTTGCC | + |
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Preference number: 6 (lower is better) Translates to: EMWTNSSTWFWT*ARVPSMFVEFA Trigger: GGCAAATTCCACAAACATTGACGGAACCCTTGCCAAGGTCCAGAACCATGTTGAGGAATTGGTCCACATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 72 bp | AAATGTGGACCAATTCCTCAACATGGTTCTGGACCTTaGCAAGGGTTCCGTCAATGTTTGTGGAATTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KCGPIPQHGSGP*QGFRQCLWNLP Trigger: AGGCAAATTCCACAAACATTGACGGAACCCTTGCCAAGGTCCAGAACCATGTTGAGGAATTGGTCCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 72 bp | GGGTTAAATGAGGAAATGTGGACCAATTCCTCAACATaGTTCTGGACCTTGGCAAGGGTTCCGTCAATGTTT | + |
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Preference number: 6 (lower is better) Translates to: GLNEEMWTNSST*FWTLARVPSMF Trigger: AAACATTGACGGAACCCTTGCCAAGGTCCAGAACCATGTTGAGGAATTGGTCCACATTTCCTCATTTAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 72 bp | CCTCTGAGGATTACAGTAGGGTTAAATGAGGAAATGTaGACCAATTCCTCAACATGGTTCTGGACCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PLRITVGLNEEM*TNSSTWFWTLA Trigger: TGCCAAGGTCCAGAACCATGTTGAGGAATTGGTCCACATTTCCTCATTTAACCCTACTGTAATCCTCAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CAA 72 bp | GGACCTTGGCAAGGGTTCCGTCAATGTTTGTGGAATTaGCCTGGTGCATATTTCAGAGTTGAAATGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GPWQGFRQCLWN*PGAYFRVEMKG Trigger: GCCTTTCATTTCAACTCTGAAATATGCACCAGGCAAATTCCACAAACATTGACGGAACCCTTGCCAAGGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CAA 72 bp | CATGGTTCTGGACCTTGGCAAGGGTTCCGTCAATGTTaGTGGAATTTGCCTGGTGCATATTTCAGAGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: HGSGPWQGFRQC*WNLPGAYFRVE Trigger: TTCAACTCTGAAATATGCACCAGGCAAATTCCACAAACATTGACGGAACCCTTGCCAAGGTCCAGAACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CAA 90 bp | ATTCCTCAACATGGTTCTGGACCTTGGCAAGGGTTCCGTCAATGTTaGTGGAATTTGCCTGGTGCATATTTCAGAGTTGAAATGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: IPQHGSGPWQGFRQC*WNLPGAYFRVEMKG Trigger: GCCTTTCATTTCAACTCTGAAATATGCACCAGGCAAATTCCACAAACATTGACGGAACCCTTGCCAAGGTCCAGAACCATGTTGAGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS TCA 72 bp | GATAAAGTGGCCTCTGAGGATTACAGTAGGGTTAAATaGGGAAATGTGGACCAATTCCTCAACATGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: DKVASEDYSRVK*GNVDQFLNMVL Trigger: CAGAACCATGTTGAGGAATTGGTCCACATTTCCTCATTTAACCCTACTGTAATCCTCAGAGGCCACTTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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| CDS CCA 72 bp | ACTCCTCTGGATTTCTATAAAATGGAAATGATAAAGTaGCCTCTGAGGATTACAGTAGGGTTAAATGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TPLDFYKMEMIK*PLRITVGLNEE Trigger: TTCCTCATTTAACCCTACTGTAATCCTCAGAGGCCACTTTATCATTTCCATTTTATAGAAATCCAGAGGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553435.1 |
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