Pregenerated sensors for LINC02278 (Homo sapiens)
Ensembl gene IDs: ENSG00000251635Ensembl transcript IDs: ENST00000512170.1, ENST00000653380.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAGGCTTGCTTTGTAACCAGCTACACTGGGCGTGTCACCTTCTTTaGGCATCACTCATGCCTCGTGTCACCTCTTTCAGGCTGCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GGLLCNQLHWACHLL*ASLMPRVTSFRLLN Trigger: ATTAAGCAGCCTGAAAGAGGTGACACGAGGCATGAGTGATGCCCAAAGAAGGTGACACGCCCAGTGTAGCTGGTTACAAAGCAAGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 90 bp | AAACACATCCAGCTATCAGGAGGCTTGCTTTGTAACCAGCTACACTaGGCGTGTCACCTTCTTTGGGCATCACTCATGCCTCGTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: KHIQLSGGLLCNQLH*ACHLLWASLMPRVT Trigger: GGTGACACGAGGCATGAGTGATGCCCAAAGAAGGTGACACGCCCAGTGTAGCTGGTTACAAAGCAAGCCTCCTGATAGCTGGATGTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 90 bp | AGTGCATTCTGTCCAGTCTGGAGTCTCACAGGCAGGGCCTACATTTaGTTCATCTGTGTATCCCTCCTGCTTGAAGGCTGTCTGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: SAFCPVWSLTGRAYI*FICVSLLLEGCLPH Trigger: ATGTGGCAGACAGCCTTCAAGCAGGAGGGATACACAGATGAACCAAATGTAGGCCCTGCCTGTGAGACTCCAGACTGGACAGAATGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS GCA 90 bp | GTAACCAGCTACACTGGGCGTGTCACCTTCTTTGGGCATCACTCATaGCTCGTGTCACCTCTTTCAGGCTGCTTAATTGACTTGCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VTSYTGRVTFFGHHS*LVSPLSGCLIDLRV Trigger: AACACGCAAGTCAATTAAGCAGCCTGAAAGAGGTGACACGAGGCATGAGTGATGCCCAAAGAAGGTGACACGCCCAGTGTAGCTGGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS GCA 90 bp | GCCATCCTCACAGTCCGACGTGTATTACTGCTATGTGGACTTAAGTaGATTCTGTCCAGTCTGGAGTCTCACAGGCAGGGCCTACATTTG | + |
|
Preference number: 5 (lower is better) Translates to: AILTVRRVLLLCGLK*ILSSLESHRQGLHL Trigger: CAAATGTAGGCCCTGCCTGTGAGACTCCAGACTGGACAGAATGCACTTAAGTCCACATAGCAGTAATACACGTCGGACTGTGAGGATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS GCA 90 bp | GCTCTTCCTTCTGCTCAGCCATCCTCACAGTCCGACGTGTATTACTaGTATGTGGACTTAAGTGCATTCTGTCCAGTCTGGAGTCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ALPSAQPSSQSDVYY*YVDLSAFCPVWSLT Trigger: TGTGAGACTCCAGACTGGACAGAATGCACTTAAGTCCACATAGCAGTAATACACGTCGGACTGTGAGGATGGCTGAGCAGAAGGAAGAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS TCA 90 bp | TGGGCATCACTCATGCCTCGTGTCACCTCTTTCAGGCTGCTTAATTaGCTTGCGTGTTTTGGACCATCTGACTTGGTACTGACTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WASLMPRVTSFRLLN*LACFGPSDLVLTSH Trigger: ATGGGAAGTCAGTACCAAGTCAGATGGTCCAAAACACGCAAGTCAATTAAGCAGCCTGAAAGAGGTGACACGAGGCATGAGTGATGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS TCA 90 bp | AAATCCACGTGTAGCAAGTCATTCCAGACCATTCGTAGTTGGTCCTaGCCTCCTTTCCCTCCTCAGACCTTTCATTCCTTCCATGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KSTCSKSFQTIRSWS*PPFPPQTFHSFHAT Trigger: TGTGGCATGGAAGGAATGAAAGGTCTGAGGAGGGAAAGGAGGTCAGGACCAACTACGAATGGTCTGGAATGACTTGCTACACGTGGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 90 bp | GACGTGTATTACTGCTATGTGGACTTAAGTGCATTCTGTCCAGTCTaGAGTCTCACAGGCAGGGCCTACATTTGGTTCATCTGTGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: DVYYCYVDLSAFCPV*SLTGRAYIWFICVS Trigger: GGATACACAGATGAACCAAATGTAGGCCCTGCCTGTGAGACTCCAGACTGGACAGAATGCACTTAAGTCCACATAGCAGTAATACACGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 90 bp | CTACTTGTTCCCTTCGAGACTTGGTGCAGGCATCAAAACCTTCTATaGCTACCAATATCCTCAATAGGCTGTTTGTTCTTTCTGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLVPFETWCRHQNLL*LPISSIGCLFFLHL Trigger: GAGGTGCAGAAAGAACAAACAGCCTATTGAGGATATTGGTAGCCATAGAAGGTTTTGATGCCTGCACCAAGTCTCGAAGGGAACAAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS TCA 90 bp | TGTTGGACAACATTAAATGCTCTTAAACTGGCCTTCTCCTATTCCTaGTGGACTTTCTTGGGGATTAAGCACTCCATCCCACTTTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: CWTTLNALKLAFSYS*WTFLGIKHSIPLYP Trigger: AGGGTAAAGTGGGATGGAGTGCTTAATCCCCAAGAAAGTCCATCAGGAATAGGAGAAGGCCAGTTTAAGAGCATTTAATGTTGTCCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS TCA 90 bp | TCAGTAGTAGTTTTGTTGGCATTCACAGTCATCAAACACCATAAATaGCCCATGTTCCAGCCATTCAAAGAGTCCCAGTCCAAGGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVVVLLAFTVIKHHK*PMFQPFKESQSKGE Trigger: TTCACCCTTGGACTGGGACTCTTTGAATGGCTGGAACATGGGTCATTTATGGTGTTTGATGACTGTGAATGCCAACAAAACTACTACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS TCA 90 bp | CTATTTATTGGCCCAAACATAAACTCCTTGGTTTCAATGGGACCTTaGGCTGAATATAGAAACGCACAGATCAAAGAGGCTCCAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFIGPNINSLVSMGP*AEYRNAQIKEAPRS Trigger: TGACCTTGGAGCCTCTTTGATCTGTGCGTTTCTATATTCAGCTCAAGGTCCCATTGAAACCAAGGAGTTTATGTTTGGGCCAATAAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 90 bp | AACCATTATTCCCAGAGATTCTGCCATTTCTGTAAGAGGTGGTGGTaGGTAACATCTTCTTTGCTTGCAGACTTCCTCTTATCACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: NHYSQRFCHFCKRWW*VTSSLLADFLLSHF Trigger: AAAATGTGATAAGAGGAAGTCTGCAAGCAAAGAAGATGTTACCCACCACCACCTCTTACAGAAATGGCAGAATCTCTGGGAATAATGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512170.1 ENST00000653380.1 |
||
| CDS CCA 72 bp | CTTTGTAACCAGCTACACTGGGCGTGTCACCTTCTTTaGGCATCACTCATGCCTCGTGTCACCTCTTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LCNQLHWACHLL*ASLMPRVTSFR Trigger: CCTGAAAGAGGTGACACGAGGCATGAGTGATGCCCAAAGAAGGTGACACGCCCAGTGTAGCTGGTTACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 72 bp | TGTCCAGTCTGGAGTCTCACAGGCAGGGCCTACATTTaGTTCATCTGTGTATCCCTCCTGCTTGAAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CPVWSLTGRAYI*FICVSLLLEGC Trigger: ACAGCCTTCAAGCAGGAGGGATACACAGATGAACCAAATGTAGGCCCTGCCTGTGAGACTCCAGACTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS GCA 72 bp | TACACTGGGCGTGTCACCTTCTTTGGGCATCACTCATaGCTCGTGTCACCTCTTTCAGGCTGCTTAATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: YTGRVTFFGHHS*LVSPLSGCLID Trigger: GTCAATTAAGCAGCCTGAAAGAGGTGACACGAGGCATGAGTGATGCCCAAAGAAGGTGACACGCCCAGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS GCA 72 bp | ACAGTCCGACGTGTATTACTGCTATGTGGACTTAAGTaGATTCTGTCCAGTCTGGAGTCTCACAGGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TVRRVLLLCGLK*ILSSLESHRQG Trigger: GCCCTGCCTGTGAGACTCCAGACTGGACAGAATGCACTTAAGTCCACATAGCAGTAATACACGTCGGACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS GCA 72 bp | GGGCATCACTCATGCCTCGTGTCACCTCTTTCAGGCTaGTTAATTGACTTGCGTGTTTTGGACCATCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: GHHSCLVSPLSG*LIDLRVLDHLT Trigger: AGTCAGATGGTCCAAAACACGCAAGTCAATTAAGCAGCCTGAAAGAGGTGACACGAGGCATGAGTGATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 72 bp | CTGTTTATATTGGAGTCTCACAGCGGACACAGACCATaGTCTCATGGAGGCCATTGTCACGATGCTCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LFILESHSGHRP*SHGGHCHDAQL Trigger: CAACTGAGCATCGTGACAATGGCCTCCATGAGACCATGGTCTGTGTCCGCTGTGAGACTCCAATATAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CAA 90 bp | CTACACGTCTCTACTCTCAAATCTCCTTTCCCACTCCTGTTTATATaGGAGTCTCACAGCGGACACAGACCATGGTCTCATGGAGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LHVSTLKSPFPLLFI*ESHSGHRPWSHGGH Trigger: ATGGCCTCCATGAGACCATGGTCTGTGTCCGCTGTGAGACTCCAATATAAACAGGAGTGGGAAAGGAGATTTGAGAGTAGAGACGTGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS TCA 72 bp | CTCATGCCTCGTGTCACCTCTTTCAGGCTGCTTAATTaGCTTGCGTGTTTTGGACCATCTGACTTGGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: LMPRVTSFRLLN*LACFGPSDLVL Trigger: CAGTACCAAGTCAGATGGTCCAAAACACGCAAGTCAATTAAGCAGCCTGAAAGAGGTGACACGAGGCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 72 bp | TACTGCTATGTGGACTTAAGTGCATTCTGTCCAGTCTaGAGTCTCACAGGCAGGGCCTACATTTGGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: YCYVDLSAFCPV*SLTGRAYIWFI Trigger: GATGAACCAAATGTAGGCCCTGCCTGTGAGACTCCAGACTGGACAGAATGCACTTAAGTCCACATAGCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 72 bp | CTACTCTCAAATCTCCTTTCCCACTCCTGTTTATATTaGAGTCTCACAGCGGACACAGACCATGGTCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LLSNLLSHSCLY*SLTADTDHGLM Trigger: CATGAGACCATGGTCTGTGTCCGCTGTGAGACTCCAATATAAACAGGAGTGGGAAAGGAGATTTGAGAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CAA 90 bp | AAGGACTTTACAAGTATTTCAAAACACATCCAGCTATCAGGAGGCTaGCTTTGTAACCAGCTACACTGGGCGTGTCACCTTCTTTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KDFTSISKHIQLSGG*LCNQLHWACHLLWA Trigger: TGCCCAAAGAAGGTGACACGCCCAGTGTAGCTGGTTACAAAGCAAGCCTCCTGATAGCTGGATGTGTTTTGAAATACTTGTAAAGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 72 bp | TCCCAGAGATTCTGCCATTTCTGTAAGAGGTGGTGGTaGGTAACATCTTCTTTGCTTGCAGACTTCCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SQRFCHFCKRWW*VTSSLLADFLL Trigger: TAAGAGGAAGTCTGCAAGCAAAGAAGATGTTACCCACCACCACCTCTTACAGAAATGGCAGAATCTCTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512170.1 ENST00000653380.1 |
||
| CDS CCA 72 bp | TATTCCCAGAGATTCTGCCATTTCTGTAAGAGGTGGTaGTGGGTAACATCTTCTTTGCTTGCAGACTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: YSQRFCHFCKRW*WVTSSLLADFL Trigger: GAGGAAGTCTGCAAGCAAAGAAGATGTTACCCACCACCACCTCTTACAGAAATGGCAGAATCTCTGGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512170.1 ENST00000653380.1 |
||
| CDS CAA 72 bp | TCTACTCTCAAATCTCCTTTCCCACTCCTGTTTATATaGGAGTCTCACAGCGGACACAGACCATGGTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: STLKSPFPLLFI*ESHSGHRPWSH Trigger: ATGAGACCATGGTCTGTGTCCGCTGTGAGACTCCAATATAAACAGGAGTGGGAAAGGAGATTTGAGAGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS TCA 72 bp | GGCCCAAACATAAACTCCTTGGTTTCAATGGGACCTTaGGCTGAATATAGAAACGCACAGATCAAAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPNINSLVSMGP*AEYRNAQIKEA Trigger: AGCCTCTTTGATCTGTGCGTTTCTATATTCAGCTCAAGGTCCCATTGAAACCAAGGAGTTTATGTTTGGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||
| CDS CCA 72 bp | TTAAACTGGCCTTCTCCTATTCCTGATGGACTTTCTTaGGGATTAAGCACTCCATCCCACTTTACCCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LNWPSPIPDGLS*GLSTPSHFTLY Trigger: ATACAGGGTAAAGTGGGATGGAGTGCTTAATCCCCAAGAAAGTCCATCAGGAATAGGAGAAGGCCAGTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512170.1 ENST00000653380.1 |
||
| CDS CAA 72 bp | TTGCAGACTTCCTCTTATCACATTTTGATCTTGAGATaGGTGGATGTCTTCCTGTATCCTCAAAGGACTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LQTSSYHILILR*VDVFLYPQRTY Trigger: ATAAGTCCTTTGAGGATACAGGAAGACATCCACCAATCTCAAGATCAAAATGTGATAAGAGGAAGTCTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512170.1 ENST00000653380.1 |
||
| CDS CAA 72 bp | ACGCACAGATCAAAGAGGCTCCAAGGTCATTCAGTATaGTGCACATTACCATTCTTTATCAATTCAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: THRSKRLQGHSV*CTLPFFINSNF Trigger: GAAGTTTGAATTGATAAAGAATGGTAATGTGCACAATACTGAATGACCTTGGAGCCTCTTTGATCTGTGCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653380.1 |
||