Pregenerated sensors for LINC02275 (Homo sapiens)
Ensembl gene IDs: ENSG00000248319Ensembl transcript IDs: ENST00000508313.2, ENST00000657085.1, ENST00000665818.1, ENST00000669558.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCCGTCTGGTGGGACACTTGGTATCATGTGCCCTTCCCGCTCCATaGCTTGGAATGGAATTTGTGCTGGCCGTTAACGTTCTTGAATGC | + |
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Preference number: 5 (lower is better) Translates to: GRLVGHLVSCALPAP*LGMEFVLAVNVLEC Trigger: GCATTCAAGAACGTTAACGGCCAGCACAAATTCCATTCCAAGCCATGGAGCGGGAAGGGCACATGATACCAAGTGTCCCACCAGACGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS CCA 90 bp | TCCCGAGGTGTATTAGTTAGCAAGATGGCCGTCTGGTGGGACACTTaGTATCATGTGCCCTTCCCGCTCCATGGCTTGGAATGGAATTTG | + |
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Preference number: 5 (lower is better) Translates to: SRGVLVSKMAVWWDT*YHVPFPLHGLEWNL Trigger: CAAATTCCATTCCAAGCCATGGAGCGGGAAGGGCACATGATACCAAGTGTCCCACCAGACGGCCATCTTGCTAACTAATACACCTCGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS TCA 90 bp | CTTTCTTCCTGGATGAACAGGAACAACTCTGGGAGCCGCTTGCAGTaGCACGATGCAGCTGTGTGTATACCTGGATGCCATATGGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LSSWMNRNNSGSRLQ*HDAAVCIPGCHMGN Trigger: GTTTCCCATATGGCATCCAGGTATACACACAGCTGCATCGTGTCACTGCAAGCGGCTCCCAGAGTTGTTCCTGTTCATCCAGGAAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508313.2 ENST00000669558.1 |
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| CDS TCA 90 bp | CCCTTTGCTGACTCTCTTTTCGGACTCAGCCTGCCTGCACCTAGGTaGAATAAACAGCCTTGTTGCTCACACAAAGCCTGTTTGGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: PFADSLFGLSLPAPR*NKQPCCSHKACLVV Trigger: GACCACCAAACAGGCTTTGTGTGAGCAACAAGGCTGTTTATTTCACCTAGGTGCAGGCAGGCTGAGTCCGAAAAGAGAGTCAGCAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS GCA 90 bp | CTGGATGAACAGGAACAACTCTGGGAGCCGCTTGCAGTGACACGATaGAGCTGTGTGTATACCTGGATGCCATATGGGAAACTGCAAATT | + |
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Preference number: 5 (lower is better) Translates to: LDEQEQLWEPLAVTR*SCVYTWMPYGKLQI Trigger: AATTTGCAGTTTCCCATATGGCATCCAGGTATACACACAGCTGCATCGTGTCACTGCAAGCGGCTCCCAGAGTTGTTCCTGTTCATCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508313.2 ENST00000669558.1 |
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| CDS CCA 90 bp | TATAGCCTGGAAGCCTGCCCCACCCCACGAGTTGTCCCGCTGTTCTaGACCAAGCCAATATATTTCTTAATGTATCTGATTGATGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: YSLEACPTPRVVPLF*TKPIYFLMYLIDVS Trigger: TGAGACATCAATCAGATACATTAAGAAATATATTGGCTTGGTCCAGAACAGCGGGACAACTCGTGGGGTGGGGCAGGCTTCCAGGCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS TCA 90 bp | ACAACCAGCCACAAACTGGTGCTTATGATGATGGTGTCTTGTAAATaGACAACAAAGAGCAGGGACCACTCGACCTTCTTACTGCATGCC | + |
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Preference number: 5 (lower is better) Translates to: TTSHKLVLMMMVSCK*TTKSRDHSTFLLHA Trigger: GGCATGCAGTAAGAAGGTCGAGTGGTCCCTGCTCTTTGTTGTTCATTTACAAGACACCATCATCATAAGCACCAGTTTGTGGCTGGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CCA 90 bp | CACCTAGGTGAAATAAACAGCCTTGTTGCTCACACAAAGCCTGTTTaGTGGTCTCTTCACACAGACGTGCGTGACAGTCACAAACTTATG | + |
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Preference number: 5 (lower is better) Translates to: HLGEINSLVAHTKPV*WSLHTDVRDSHKLM Trigger: CATAAGTTTGTGACTGTCACGCACGTCTGTGTGAAGAGACCACCAAACAGGCTTTGTGTGAGCAACAAGGCTGTTTATTTCACCTAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS GCA 90 bp | CTTGTAAATGAACAACAAAGAGCAGGGACCACTCGACCTTCTTACTaGATGCCTTCTTTGTCTCAGAGAACCAGTGAGGTTCATTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LVNEQQRAGTTRPSY*MPSLSQRTSEVHLL Trigger: GAGCAAATGAACCTCACTGGTTCTCTGAGACAAAGAAGGCATGCAGTAAGAAGGTCGAGTGGTCCCTGCTCTTTGTTGTTCATTTACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CCA 90 bp | CTAGGTGAAATAAACAGCCTTGTTGCTCACACAAAGCCTGTTTGGTaGTCTCTTCACACAGACGTGCGTGACAGTCACAAACTTATGATT | + |
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Preference number: 5 (lower is better) Translates to: LGEINSLVAHTKPVW*SLHTDVRDSHKLMI Trigger: AATCATAAGTTTGTGACTGTCACGCACGTCTGTGTGAAGAGACCACCAAACAGGCTTTGTGTGAGCAACAAGGCTGTTTATTTCACCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS TCA 90 bp | ATGGAATTTGTGCTGGCCGTTAACGTTCTTGAATGCATTTCCCTCTaGGCTTGGATAGAGGGTAAGACAGCCAAATGGAAACATCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: MEFVLAVNVLECISL*AWIEGKTAKWKHLL Trigger: AAGAAGATGTTTCCATTTGGCTGTCTTACCCTCTATCCAAGCTCAGAGGGAAATGCATTCAAGAACGTTAACGGCCAGCACAAATTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS TCA 90 bp | CTGATGACATTTCACCATTGTGATTTGTTCCTGCCCCACCTTAACTaGGCGATTAACCTTGTGAAATTCCTTTTCCTGACTCAGAACCTC | + |
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Preference number: 5 (lower is better) Translates to: LMTFHHCDLFLPHLN*AINLVKFLFLTQNL Trigger: GAGGTTCTGAGTCAGGAAAAGGAATTTCACAAGGTTAATCGCTCAGTTAAGGTGGGGCAGGAACAAATCACAATGGTGAAATGTCATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS TCA 90 bp | TTTTATTGTGTTACTGACCCATCACATATGCTCAGGCTTCCAAGCTaGGAACGTGCCAAACTATTAACCAAAATAATACGTCTGGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: FYCVTDPSHMLRLPS*ERAKLLTKIIRLAP Trigger: GGGAGCCAGACGTATTATTTTGGTTAATAGTTTGGCACGTTCTCAGCTTGGAAGCCTGAGCATATGTGATGGGTCAGTAACACAATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS TCA 90 bp | TATGCATCCAGATGGCCTGAAGCAAGTGAAGAATCACAAAAGAAGTaGAAATGGCCAGTTCTTGCATTAACTGATGACATTTCACCATTG | + |
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Preference number: 5 (lower is better) Translates to: YASRWPEASEESQKK*KWPVLALTDDISPL Trigger: CAATGGTGAAATGTCATCAGTTAATGCAAGAACTGGCCATTTTCACTTCTTTTGTGATTCTTCACTTGCTTCAGGCCATCTGGATGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS GCA 90 bp | ATATTTTACAGCTTGACTCTTTTCAGCGACAATAATTGTGCTAAGTaGTTCAGGCATATTATCCCATTCATTCTCACAACTCCCTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: IFYSLTLFSDNNCAK*FRHIIPFILTTPLS Trigger: TGACAAGGGAGTTGTGAGAATGAATGGGATAATATGCCTGAAGCACTTAGCACAATTATTGTCGCTGAAAAGAGTCAAGCTGTAAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS GCA 72 bp | AACCTGAACATGAAATTGACCTATAGCCTGGAAGCCTaGCCCACCCCACGAGTTGTCCCGCTGTTCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: NLNMKLTYSLEA*PTPRVVPLFWT Trigger: GGTCCAGAACAGCGGGACAACTCGTGGGGTGGGGCAGGCTTCCAGGCTATAGGTCAATTTCATGTTCAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CCA 72 bp | TCCCGAGGTGTATTAGTTAGCAAGATGGCCGTCTGGTaGGACACTTGGTATCATGTGCCCTTCCCGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SRGVLVSKMAVW*DTWYHVPFPLH Trigger: ATGGAGCGGGAAGGGCACATGATACCAAGTGTCCCACCAGACGGCCATCTTGCTAACTAATACACCTCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS TCA 72 bp | TGGATGAACAGGAACAACTCTGGGAGCCGCTTGCAGTaGCACGATGCAGCTGTGTGTATACCTGGATGCCAT | + |
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Preference number: 6 (lower is better) Translates to: WMNRNNSGSRLQ*HDAAVCIPGCH Trigger: ATGGCATCCAGGTATACACACAGCTGCATCGTGTCACTGCAAGCGGCTCCCAGAGTTGTTCCTGTTCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508313.2 ENST00000669558.1 |
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| CDS TCA 72 bp | TGGATGAACAGGAACAACTCTGGGAGCCGCTTGCAGTaGCACGATGCAGCTGTGTGTATACCTGGATGCCTA | + |
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Preference number: 6 (lower is better) Translates to: WMNRNNSGSRLQ*HDAAVCIPGCL Trigger: TAGGCATCCAGGTATACACACAGCTGCATCGTGTCACTGCAAGCGGCTCCCAGAGTTGTTCCTGTTCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657085.1 ENST00000665818.1 |
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| CDS GCA 72 bp | CAGGAACAACTCTGGGAGCCGCTTGCAGTGACACGATaGAGCTGTGTGTATACCTGGATGCCATATGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: QEQLWEPLAVTR*SCVYTWMPYGK Trigger: TTTCCCATATGGCATCCAGGTATACACACAGCTGCATCGTGTCACTGCAAGCGGCTCCCAGAGTTGTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508313.2 ENST00000669558.1 |
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| CDS CCA 72 bp | GTGGGACACTTGGTATCATGTGCCCTTCCCGCTCCATaGCTTGGAATGGAATTTGTGCTGGCCGTTAACGTT | + |
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Preference number: 6 (lower is better) Translates to: VGHLVSCALPAP*LGMEFVLAVNV Trigger: AACGTTAACGGCCAGCACAAATTCCATTCCAAGCCATGGAGCGGGAAGGGCACATGATACCAAGTGTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS CCA 72 bp | GTATTAGTTAGCAAGATGGCCGTCTGGTGGGACACTTaGTATCATGTGCCCTTCCCGCTCCATGGCTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VLVSKMAVWWDT*YHVPFPLHGLE Trigger: TTCCAAGCCATGGAGCGGGAAGGGCACATGATACCAAGTGTCCCACCAGACGGCCATCTTGCTAACTAATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS CAA 72 bp | GACACTTGGTATCATGTGCCCTTCCCGCTCCATGGCTaGGAATGGAATTTGTGCTGGCCGTTAACGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: DTWYHVPFPLHG*EWNLCWPLTFL Trigger: CAAGAACGTTAACGGCCAGCACAAATTCCATTCCAAGCCATGGAGCGGGAAGGGCACATGATACCAAGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS CAA 90 bp | GTCTGGTGGGACACTTGGTATCATGTGCCCTTCCCGCTCCATGGCTaGGAATGGAATTTGTGCTGGCCGTTAACGTTCTTGAATGCATTT | + |
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Preference number: 6 (lower is better) Translates to: VWWDTWYHVPFPLHG*EWNLCWPLTFLNAF Trigger: AAATGCATTCAAGAACGTTAACGGCCAGCACAAATTCCATTCCAAGCCATGGAGCGGGAAGGGCACATGATACCAAGTGTCCCACCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS TCA 72 bp | GACTCTCTTTTCGGACTCAGCCTGCCTGCACCTAGGTaGAATAAACAGCCTTGTTGCTCACACAAAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: DSLFGLSLPAPR*NKQPCCSHKAC Trigger: ACAGGCTTTGTGTGAGCAACAAGGCTGTTTATTTCACCTAGGTGCAGGCAGGCTGAGTCCGAAAAGAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CAA 72 bp | AACCTTGGTCTCCAGAATCTTAACCTGAACATGAAATaGACCTATAGCCTGGAAGCCTGCCCCACCCCACGA | + |
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Preference number: 6 (lower is better) Translates to: NLGLQNLNLNMK*TYSLEACPTPR Trigger: TCGTGGGGTGGGGCAGGCTTCCAGGCTATAGGTCAATTTCATGTTCAGGTTAAGATTCTGGAGACCAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CAA 90 bp | ACTTGGTATCATGTGCCCTTCCCGCTCCATGGCTTGGAATGGAATTaGTGCTGGCCGTTAACGTTCTTGAATGCATTTCCCTCTGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: TWYHVPFPLHGLEWN*CWPLTFLNAFPSEL Trigger: AAGCTCAGAGGGAAATGCATTCAAGAACGTTAACGGCCAGCACAAATTCCATTCCAAGCCATGGAGCGGGAAGGGCACATGATACCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS GCA 72 bp | TATCTCCCTTTGCTGACTCTCTTTTCGGACTCAGCCTaGCTGCACCTAGGTGAAATAAACAGCCTTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: YLPLLTLFSDSA*LHLGEINSLVA Trigger: AGCAACAAGGCTGTTTATTTCACCTAGGTGCAGGCAGGCTGAGTCCGAAAAGAGAGTCAGCAAAGGGAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CCA 72 bp | GAAATAAACAGCCTTGTTGCTCACACAAAGCCTGTTTaGTGGTCTCTTCACACAGACGTGCGTGACAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: EINSLVAHTKPV*WSLHTDVRDSH Trigger: GTGACTGTCACGCACGTCTGTGTGAAGAGACCACCAAACAGGCTTTGTGTGAGCAACAAGGCTGTTTATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CCA 72 bp | GAAGCCTGCCCCACCCCACGAGTTGTCCCGCTGTTCTaGACCAAGCCAATATATTTCTTAATGTATCTGATT | + |
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Preference number: 6 (lower is better) Translates to: EACPTPRVVPLF*TKPIYFLMYLI Trigger: AATCAGATACATTAAGAAATATATTGGCTTGGTCCAGAACAGCGGGACAACTCGTGGGGTGGGGCAGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CCA 72 bp | GAATCCCTGCCCTCAATCCATTTGAGTCTAGTGGGATaGGAGCAGACAAGTAGAGAGGTAATATTTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: ESLPSIHLSLVG*EQTSREVIFTR Trigger: CCTGGTAAATATTACCTCTCTACTTGTCTGCTCCCATCCCACTAGACTCAAATGGATTGAGGGCAGGGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CAA 72 bp | GGAATGAATAAAGTGGAATCCCTGCCCTCAATCCATTaGAGTCTAGTGGGATGGGAGCAGACAAGTAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: GMNKVESLPSIH*SLVGWEQTSRE Trigger: CTCTCTACTTGTCTGCTCCCATCCCACTAGACTCAAATGGATTGAGGGCAGGGATTCCACTTTATTCATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS GCA 72 bp | CCCATCACATATGCTCAGGCTTCCAAGCTGAGAACGTaGCAAACTATTAACCAAAATAATACGTCTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PITYAQASKLRT*QTINQNNTSGS Trigger: GGAGCCAGACGTATTATTTTGGTTAATAGTTTGGCACGTTCTCAGCTTGGAAGCCTGAGCATATGTGATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS GCA 72 bp | CCCGTTACTTTTATTGTGTTACTGACCCATCACATATaGTCAGGCTTCCAAGCTGAGAACGTGCCAAACTAT | + |
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Preference number: 6 (lower is better) Translates to: PVTFIVLLTHHI*SGFQAENVPNY Trigger: ATAGTTTGGCACGTTCTCAGCTTGGAAGCCTGAGCATATGTGATGGGTCAGTAACACAATAAAAGTAACGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS TCA 72 bp | TCCACAGATCTCCTGTTCCTTTGGGTCTTCATTTTCTaGAAGTTCCCGTGTCACATAATACCTTCCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: STDLLFLWVFIF*KFPCHIIPSIH Trigger: ATGGATGGAAGGTATTATGTGACACGGGAACTTTCAGAAAATGAAGACCCAAAGGAACAGGAGATCTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508313.2 ENST00000665818.1 |
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| CDS TCA 72 bp | GAAAGAAATGCTTCCCCGTTACTTTTATTGTGTTACTaGCCCATCACATATGCTCAGGCTTCCAAGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ERNASPLLLLCY*PITYAQASKLR Trigger: TCTCAGCTTGGAAGCCTGAGCATATGTGATGGGTCAGTAACACAATAAAAGTAACGGGGAAGCATTTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS CAA 72 bp | AGTCTAGCACCTTTTAAAGGTCTGAATAGGAAACGTTaGTCTTCTGTTGTCTCTAAGGGCAGCCACTATGAG | + |
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Preference number: 6 (lower is better) Translates to: SLAPFKGLNRKR*SSVVSKGSHYE Trigger: CTCATAGTGGCTGCCCTTAGAGACAACAGAAGACAAACGTTTCCTATTCAGACCTTTAAAAGGTGCTAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CAA 90 bp | AAGGATGAAGGAATGAATAAAGTGGAATCCCTGCCCTCAATCCATTaGAGTCTAGTGGGATGGGAGCAGACAAGTAGAGAGGTAATATTT | + |
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Preference number: 6 (lower is better) Translates to: KDEGMNKVESLPSIH*SLVGWEQTSREVIF Trigger: AAATATTACCTCTCTACTTGTCTGCTCCCATCCCACTAGACTCAAATGGATTGAGGGCAGGGATTCCACTTTATTCATTCCTTCATCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS TCA 72 bp | GTTACTGACCCATCACATATGCTCAGGCTTCCAAGCTaGGAACGTGCCAAACTATTAACCAAAATAATACGT | + |
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Preference number: 6 (lower is better) Translates to: VTDPSHMLRLPS*ERAKLLTKIIR Trigger: ACGTATTATTTTGGTTAATAGTTTGGCACGTTCTCAGCTTGGAAGCCTGAGCATATGTGATGGGTCAGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508313.2 ENST00000657085.1 ENST00000665818.1 ENST00000669558.1 |
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| CDS TCA 72 bp | TTTCACCATTGTGATTTGTTCCTGCCCCACCTTAACTaGGCGATTAACCTTGTGAAATTCCTTTTCCTGACT | + |
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Preference number: 6 (lower is better) Translates to: FHHCDLFLPHLN*AINLVKFLFLT Trigger: AGTCAGGAAAAGGAATTTCACAAGGTTAATCGCTCAGTTAAGGTGGGGCAGGAACAAATCACAATGGTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CAA 90 bp | TGGGTTTCAAAATCCTATGCTGGCAGTCAAAAACTTTCTTTCTCTTaGCATTTCTGCAGTAATTCTAATTCTCCCGGAGGCAGGTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: WVSKSYAGSQKLSFS*HFCSNSNSPGGRWN Trigger: ATTCCACCTGCCTCCGGGAGAATTAGAATTACTGCAGAAATGCAAAGAGAAAGAAAGTTTTTGACTGCCAGCATAGGATTTTGAAACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CAA 72 bp | ATTAACAGGCACTTTTGTCTCTTCTGCATTTCTGCATaGGACTCCCCGCATATCTATACCACACATATGTAT | + |
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Preference number: 6 (lower is better) Translates to: INRHFCLFCISA*DSPHIYTTHMY Trigger: ATACATATGTGTGGTATAGATATGCGGGGAGTCCAATGCAGAAATGCAGAAGAGACAAAAGTGCCTGTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000508313.2 ENST00000665818.1 ENST00000669558.1 |
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| CDS TCA 72 bp | CCAATATATTTCTTAATGTATCTGATTGATGTCTCATaGCTTCCTGACCACCTTGGGTACATGTTCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PIYFLMYLIDVS*LPDHLGYMFSG Trigger: TCCTGAGAACATGTACCCAAGGTGGTCAGGAAGTCATGAGACATCAATCAGATACATTAAGAAATATATTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS GCA 72 bp | AGCTTGACTCTTTTCAGCGACAATAATTGTGCTAAGTaGTTCAGGCATATTATCCCATTCATTCTCACAACT | + |
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Preference number: 6 (lower is better) Translates to: SLTLFSDNNCAK*FRHIIPFILTT Trigger: AGTTGTGAGAATGAATGGGATAATATGCCTGAAGCACTTAGCACAATTATTGTCGCTGAAAAGAGTCAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CAA 72 bp | TTGCTGTATTTTGAAATGGCCGTGCAAAGCTGTCCTTaGTGGCAGAAAATTTGCATCTGTAAAGAAACTCTA | + |
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Preference number: 6 (lower is better) Translates to: LLYFEMAVQSCP*WQKICICKETL Trigger: TAGAGTTTCTTTACAGATGCAAATTTTCTGCCACAAAGGACAGCTTTGCACGGCCATTTCAAAATACAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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| CDS CAA 72 bp | AATATTTTATCCCAAAACATGTTTCTTTGCTGTATTTaGAAATGGCCGTGCAAAGCTGTCCTTTGTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: NILSQNMFLCCI*KWPCKAVLCGR Trigger: TCTGCCACAAAGGACAGCTTTGCACGGCCATTTCAAAATACAGCAAAGAAACATGTTTTGGGATAAAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508313.2 |
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