Pregenerated sensors for LINC02270 (Homo sapiens)
Ensembl gene IDs: ENSG00000251210Ensembl transcript IDs: ENST00000505386.2, ENST00000515691.5, ENST00000657988.1, ENST00000667212.1, ENST00000667495.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGGGCTCGACTGTCCAAACTTCAGCTACCAGCCCCTGCTGTTCCTTaGCTGATATATTTAACTGTCTGTTCTGCCTGCAAACAGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: RARLSKLQLPAPAVP*LIYLTVCSACKQGR Trigger: CCTGCCCTGTTTGCAGGCAGAACAGACAGTTAAATATATCAGCCAAGGAACAGCAGGGGCTGGTAGCTGAAGTTTGGACAGTCGAGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000505386.2 ENST00000515691.5 ENST00000657988.1 ENST00000667212.1 ENST00000667495.1 |
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| CDS GCA 90 bp | GCAGGTTGCAGGTTTTCTGTTTCATCAGCAGGACTCAACTACGACTaGTGGGCACTGGCAGTTAAATGCCCCAGTGTCCTCTTCGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: AGCRFSVSSAGLNYD*WALAVKCPSVLFVR Trigger: CCTAACGAAGAGGACACTGGGGCATTTAACTGCCAGTGCCCAGCAGTCGTAGTTGAGTCCTGCTGATGAAACAGAAAACCTGCAACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667212.1 |
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| CDS GCA 90 bp | GCCCCTGCTGTTCCTTGGCTGATATATTTAACTGTCTGTTCTGCCTaGAAACAGGGCAGGTTGCAGGTTTTCTGTTTCATCAGCAGGACT | + |
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Preference number: 5 (lower is better) Translates to: APAVPWLIYLTVCSA*KQGRLQVFCFISRT Trigger: AGTCCTGCTGATGAAACAGAAAACCTGCAACCTGCCCTGTTTGCAGGCAGAACAGACAGTTAAATATATCAGCCAAGGAACAGCAGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000505386.2 ENST00000515691.5 ENST00000657988.1 ENST00000667212.1 ENST00000667495.1 |
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| CDS GCA 90 bp | ACCAGCCCCTGCTGTTCCTTGGCTGATATATTTAACTGTCTGTTCTaGCTGCAAACAGGGCAGGTTGCAGGTTTTCTGTTTCATCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TSPCCSLADIFNCLF*LQTGQVAGFLFHQQ Trigger: CTGCTGATGAAACAGAAAACCTGCAACCTGCCCTGTTTGCAGGCAGAACAGACAGTTAAATATATCAGCCAAGGAACAGCAGGGGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000505386.2 ENST00000515691.5 ENST00000657988.1 ENST00000667212.1 ENST00000667495.1 |
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| CDS GCA 90 bp | CCATCATTTACGGGCTCGACTGTCCAAACTTCAGCTACCAGCCCCTaGTGTTCCTTGGCTGATATATTTAACTGTCTGTTCTGCCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: PSFTGSTVQTSATSP*CSLADIFNCLFCLQ Trigger: TTGCAGGCAGAACAGACAGTTAAATATATCAGCCAAGGAACAGCAGGGGCTGGTAGCTGAAGTTTGGACAGTCGAGCCCGTAAATGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000515691.5 ENST00000667212.1 ENST00000667495.1 |
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| CDS GCA 90 bp | AAATCATTTACGGGCTCGACTGTCCAAACTTCAGCTACCAGCCCCTaGTGTTCCTTGGCTGATATATTTAACTGTCTGTTCTGCCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: KSFTGSTVQTSATSP*CSLADIFNCLFCLQ Trigger: TTGCAGGCAGAACAGACAGTTAAATATATCAGCCAAGGAACAGCAGGGGCTGGTAGCTGAAGTTTGGACAGTCGAGCCCGTAAATGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505386.2 ENST00000657988.1 |
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| CDS GCA 90 bp | ATAAGGGAATCCAGGATTTCCCAAACTCTGCCTTATCCACGTGGCTaGTGTTCTTCTCTGTTGATATTCGAGGAAGATATCTGGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: IRESRISQTLPYPRG*CSSLLIFEEDIWNQ Trigger: CTGGTTCCAGATATCTTCCTCGAATATCAACAGAGAAGAACAGCAGCCACGTGGATAAGGCAGAGTTTGGGAAATCCTGGATTCCCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657988.1 |
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| CDS GCA 90 bp | ATAAGGGAATCCAGGATTTCCCAAACTCTGCCTTATCCACGTGGCTaGTGTTCTTCTCTGTTGATATTCGAGGAAGATATCTTACATTTT | + |
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Preference number: 5 (lower is better) Translates to: IRESRISQTLPYPRG*CSSLLIFEEDILHF Trigger: AAAATGTAAGATATCTTCCTCGAATATCAACAGAGAAGAACAGCAGCCACGTGGATAAGGCAGAGTTTGGGAAATCCTGGATTCCCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505386.2 ENST00000667212.1 ENST00000667495.1 |
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| CDS TCA 90 bp | TTTCCCAAACTCTGCCTTATCCACGTGGCTGCTGTTCTTCTCTGTTaGTATTCGAGGAAGATATCTTACATTTTCTTGTGTGATTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: FPKLCLIHVAAVLLC*YSRKISYIFLCDFR Trigger: TCTAAAATCACACAAGAAAATGTAAGATATCTTCCTCGAATATCAACAGAGAAGAACAGCAGCCACGTGGATAAGGCAGAGTTTGGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000505386.2 ENST00000667212.1 ENST00000667495.1 |
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| CDS CCA 72 bp | TTTCATCAGCAGGACTCAACTACGACTGCTGGGCACTaGCAGTTAAATGCCCCAGTGTCCTCTTCGTTAGGC | + |
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Preference number: 6 (lower is better) Translates to: FHQQDSTTTAGH*QLNAPVSSSLG Trigger: GCCTAACGAAGAGGACACTGGGGCATTTAACTGCCAGTGCCCAGCAGTCGTAGTTGAGTCCTGCTGATGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667212.1 |
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| CDS CAA 90 bp | ACGGGCTCGACTGTCCAAACTTCAGCTACCAGCCCCTGCTGTTCCTaGGCTGATATATTTAACTGTCTGTTCTGCCTGCAAACAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: TGSTVQTSATSPCCS*ADIFNCLFCLQTGQ Trigger: CTGCCCTGTTTGCAGGCAGAACAGACAGTTAAATATATCAGCCAAGGAACAGCAGGGGCTGGTAGCTGAAGTTTGGACAGTCGAGCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000505386.2 ENST00000515691.5 ENST00000657988.1 ENST00000667212.1 ENST00000667495.1 |
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| CDS GCA 72 bp | AGGTTTTCTGTTTCATCAGCAGGACTCAACTACGACTaGTGGGCACTGGCAGTTAAATGCCCCAGTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RFSVSSAGLNYD*WALAVKCPSVL Trigger: GAGGACACTGGGGCATTTAACTGCCAGTGCCCAGCAGTCGTAGTTGAGTCCTGCTGATGAAACAGAAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000505386.2 ENST00000515691.5 ENST00000667212.1 |
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| CDS GCA 72 bp | ACGGGCTCGACTGTCCAAACTTCAGCTACCAGCCCCTaGTGTTCCTTGGCTGATATATTTAACTGTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: TGSTVQTSATSP*CSLADIFNCLF Trigger: GAACAGACAGTTAAATATATCAGCCAAGGAACAGCAGGGGCTGGTAGCTGAAGTTTGGACAGTCGAGCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000505386.2 ENST00000515691.5 ENST00000657988.1 ENST00000667212.1 ENST00000667495.1 |
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| CDS TCA 72 bp | CTCTGCCTTATCCACGTGGCTGCTGTTCTTCTCTGTTaGTATTCGAGGAAGATATCTGGAACCAGAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: LCLIHVAAVLLC*YSRKISGTRGW Trigger: CCATCCTCTGGTTCCAGATATCTTCCTCGAATATCAACAGAGAAGAACAGCAGCCACGTGGATAAGGCAGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657988.1 |
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| CDS CAA 90 bp | TGGCTGATATATTTAACTGTCTGTTCTGCCTGCAAACAGGGCAGGTaGCAGGTTTTCTGTTTCATCAGCAGGACTCAACTACGACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: WLIYLTVCSACKQGR*QVFCFISRTQLRLL Trigger: CAGCAGTCGTAGTTGAGTCCTGCTGATGAAACAGAAAACCTGCAACCTGCCCTGTTTGCAGGCAGAACAGACAGTTAAATATATCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000505386.2 ENST00000515691.5 ENST00000657988.1 ENST00000667212.1 ENST00000667495.1 |
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| CDS CCA 72 bp | CTGTCCAAACTTCAGCTACCAGCCCCTGCTGTTCCTTaGCTGATATATTTAACTGTCTGTTCTGCCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LSKLQLPAPAVP*LIYLTVCSACK Trigger: TTTGCAGGCAGAACAGACAGTTAAATATATCAGCCAAGGAACAGCAGGGGCTGGTAGCTGAAGTTTGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000505386.2 ENST00000515691.5 ENST00000657988.1 ENST00000667212.1 ENST00000667495.1 |
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| CDS CAA 72 bp | ACTCTGCCTTATCCACGTGGCTGCTGTTCTTCTCTGTaGATATTCGAGGAAGATATCTGGAACCAGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: TLPYPRGCCSSL*IFEEDIWNQRM Trigger: CATCCTCTGGTTCCAGATATCTTCCTCGAATATCAACAGAGAAGAACAGCAGCCACGTGGATAAGGCAGAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657988.1 |
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| CDS GCA 72 bp | TCCAGGATTTCCCAAACTCTGCCTTATCCACGTGGCTaGTGTTCTTCTCTGTTGATATTCGAGGAAGATATC | + |
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Preference number: 6 (lower is better) Translates to: SRISQTLPYPRG*CSSLLIFEEDI Trigger: GATATCTTCCTCGAATATCAACAGAGAAGAACAGCAGCCACGTGGATAAGGCAGAGTTTGGGAAATCCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000505386.2 ENST00000657988.1 ENST00000667212.1 ENST00000667495.1 |
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| CDS TCA 72 bp | CTCTGCCTTATCCACGTGGCTGCTGTTCTTCTCTGTTaGTATTCGAGGAAGATATCTTACATTTTCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LCLIHVAAVLLC*YSRKISYIFLC Trigger: ACACAAGAAAATGTAAGATATCTTCCTCGAATATCAACAGAGAAGAACAGCAGCCACGTGGATAAGGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505386.2 ENST00000667212.1 ENST00000667495.1 |
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| CDS TCA 72 bp | ATTCCATCTGTCACCCTCCTCCATGAAAAATCTAAGTaGTGGGTCCTCTTAGCCCATTTTTCAGAAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: IPSVTLLHEKSK*WVLLAHFSEEK Trigger: TTTCTCTTCTGAAAAATGGGCTAAGAGGACCCATCACTTAGATTTTTCATGGAGGAGGGTGACAGATGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000667212.1 |
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| CDS CAA 72 bp | ACTCTGCCTTATCCACGTGGCTGCTGTTCTTCTCTGTaGATATTCGAGGAAGATATCTTACATTTTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TLPYPRGCCSSL*IFEEDILHFLV Trigger: CACAAGAAAATGTAAGATATCTTCCTCGAATATCAACAGAGAAGAACAGCAGCCACGTGGATAAGGCAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505386.2 ENST00000667212.1 ENST00000667495.1 |
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| CDS TCA 72 bp | TCTTTAAAGACCTTATATCTAAATGTAGTCACATGCTaGGGTATATTCATGACACACATGCTGGGGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: SLKTLYLNVVTC*GIFMTHMLGMR Trigger: CCTCATCCCCAGCATGTGTGTCATGAATATACCTCAGCATGTGACTACATTTAGATATAAGGTCTTTAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667212.1 |
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