RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02269 (Homo sapiens)

Ensembl gene IDs: ENSG00000250708

Ensembl transcript IDs: ENST00000509968.1, ENST00000512263.1, ENST00000654333.1, ENST00000654653.1, ENST00000654916.1, ENST00000655323.1, ENST00000656512.1, ENST00000656853.1, ENST00000659294.1, ENST00000659629.1, ENST00000660497.1, ENST00000660997.1, ENST00000661458.1, ENST00000661951.1, ENST00000664651.1, ENST00000664849.1, ENST00000665324.1, ENST00000665435.1, ENST00000665681.1, ENST00000665923.1, ENST00000667443.1, ENST00000667922.1, ENST00000670652.1, ENST00000670956.1

Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GCCCGCAGTGGAGAGCTGGGCATGCTCCTGATCTCATCGAATACCTaGGGTCGCGAGTTTGAGGCCAGCTTCACCAACAGGGAGAAACCC +
Preference number: 5 (lower is better)
Translates to: ARSGELGMLLISSNT*GREFEASFTNREKP
Trigger: GGGTTTCTCCCTGTTGGTGAAGCTGGCCTCAAACTCGCGACCTCAGGTATTCGATGAGATCAGGAGCATGCCCAGCTCTCCACTGCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656853.1
CDS GCA 90 bp AGGACGGCACGGCAGGGGCTCTGGGAAAGCGCAACAGTTTGGGGGTaGAGGGTGGGTCCTGACTCTGAGTCTTCATGTAGGTTGAATTCC +
Preference number: 5 (lower is better)
Translates to: RTARQGLWESATVWG*RVGPDSESSCRLNS
Trigger: GGAATTCAACCTACATGAAGACTCAGAGTCAGGACCCACCCTGCACCCCCAAACTGTTGCGCTTTCCCAGAGCCCCTGCCGTGCCGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS CCA 90 bp ACTAAAGTTGCAGGGCAGAGAGCTCAGTGCAGAGAGCCCAAGAGCTaGTCAGGGGTGGGAACTAGAAAGTCAGGGAAGGACGGCACGGCA +
Preference number: 5 (lower is better)
Translates to: TKVAGQRAQCREPKS*SGVGTRKSGKDGTA
Trigger: TGCCGTGCCGTCCTTCCCTGACTTTCTAGTTCCCACCCCTGACCAGCTCTTGGGCTCTCTGCACTGAGCTCTCTGCCCTGCAACTTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS TCA 90 bp CTCTCCTCTTACATGAAGCCCGCAGTGGAGAGCTGGGCATGCTCCTaGTCTCATCGAATACCTGAGGTCGCGAGTTTGAGGCCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LSSYMKPAVESWACS*SHRIPEVASLRPAS
Trigger: TGAAGCTGGCCTCAAACTCGCGACCTCAGGTATTCGATGAGATCAGGAGCATGCCCAGCTCTCCACTGCGGGCTTCATGTAAGAGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656853.1
CDS GCA 90 bp GAGAGGCCCATTGTGAGCTGGCAGTCCAGGCCACGTAGGTGTCTATaGTCCACAAGGTTGTTCAGGGACCCAGGCTTCTTCTGTCCTATT +
Preference number: 5 (lower is better)
Translates to: ERPIVSWQSRPRRCL*STRLFRDPGFFCPI
Trigger: AATAGGACAGAAGAAGCCTGGGTCCCTGAACAACCTTGTGGAGCATAGACACCTACGTGGCCTGGACTGCCAGCTCACAATGGGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000509968.1
ENST00000512263.1
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000655323.1
ENST00000656512.1
ENST00000656853.1
ENST00000659294.1
ENST00000659629.1
ENST00000660997.1
ENST00000661458.1
ENST00000661951.1
ENST00000664651.1
ENST00000664849.1
ENST00000665435.1
ENST00000665681.1
ENST00000665923.1
ENST00000667443.1
ENST00000667922.1
ENST00000670652.1
ENST00000670956.1
CDS TCA 90 bp GCTGGGCATGCTCCTGATCTCATCGAATACCTGAGGTCGCGAGTTTaGGGCCAGCTTCACCAACAGGGAGAAACCCCGTCTCTACTACAA +
Preference number: 5 (lower is better)
Translates to: AGHAPDLIEYLRSRV*GQLHQQGETPSLLQ
Trigger: TTGTAGTAGAGACGGGGTTTCTCCCTGTTGGTGAAGCTGGCCTCAAACTCGCGACCTCAGGTATTCGATGAGATCAGGAGCATGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656853.1
CDS CCA 90 bp GGGACTCCATGTTCATTTCATGCCTTTGATCCAGCTGTTAGGAAATaGGCTCTCCCTTCGGAGGAAGCACGAGGTGCCACCTGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GTPCSFHAFDPAVRK*ALPSEEARGATCLQ
Trigger: CTGGAGACAGGTGGCACCTCGTGCTTCCTCCGAAGGGAGAGCCCATTTCCTAACAGCTGGATCAAAGGCATGAAATGAACATGGAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000509968.1
ENST00000512263.1
ENST00000655323.1
ENST00000660997.1
ENST00000661951.1
ENST00000664651.1
ENST00000664849.1
ENST00000665681.1
ENST00000665923.1
ENST00000667922.1
CDS CCA 90 bp ACAAGAGGGAAGTTTCCTTCTCTCACAGAGAGGCCCATTGTGAGCTaGCAGTCCAGGCCACGTAGGTGTCTATGCTCCACAAGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: TRGKFPSLTERPIVS*QSRPRRCLCSTRLF
Trigger: GAACAACCTTGTGGAGCATAGACACCTACGTGGCCTGGACTGCCAGCTCACAATGGGCCTCTCTGTGAGAGAAGGAAACTTCCCTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000509968.1
ENST00000512263.1
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000655323.1
ENST00000656512.1
ENST00000656853.1
ENST00000659294.1
ENST00000659629.1
ENST00000660997.1
ENST00000661458.1
ENST00000661951.1
ENST00000664651.1
ENST00000664849.1
ENST00000665435.1
ENST00000665681.1
ENST00000665923.1
ENST00000667443.1
ENST00000667922.1
ENST00000670652.1
ENST00000670956.1
CDS TCA 90 bp CTTAAACAAGAGGGAAGTTTCCTTCTCTCACAGAGAGGCCCATTGTaGGCTGGCAGTCCAGGCCACGTAGGTGTCTATGCTCCACAAGGT +
Preference number: 5 (lower is better)
Translates to: LKQEGSFLLSQRGPL*AGSPGHVGVYAPQG
Trigger: ACCTTGTGGAGCATAGACACCTACGTGGCCTGGACTGCCAGCTCACAATGGGCCTCTCTGTGAGAGAAGGAAACTTCCCTCTTGTTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000509968.1
ENST00000512263.1
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000655323.1
ENST00000656512.1
ENST00000656853.1
ENST00000659294.1
ENST00000659629.1
ENST00000660997.1
ENST00000661458.1
ENST00000661951.1
ENST00000664651.1
ENST00000664849.1
ENST00000665435.1
ENST00000665681.1
ENST00000665923.1
ENST00000667443.1
ENST00000667922.1
ENST00000670652.1
ENST00000670956.1
CDS CCA 90 bp GCCCCCAAGACACAGACGCTAGCATCATGCCATTTCATCTGGGATTaGCACCTTGTATGTTCCCAATTTGTCCCCAGAGACAGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: APKTQTLASCHFIWD*HLVCSQFVPRDSKQ
Trigger: CTGCTTACTGTCTCTGGGGACAAATTGGGAACATACAAGGTGCCAATCCCAGATGAAATGGCATGATGCTAGCGTCTGTGTCTTGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS GCA 90 bp CAGCGCTTTATCATTCCTCAGTACAAGGAAAGATGTTCTAGCACATaGATGTCCACTTCACGGCGAGCAGCTGTTCTGAACAAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: QRFIIPQYKERCSST*MSTSRRAAVLNKGQ
Trigger: CTGGCCCTTGTTCAGAACAGCTGCTCGCCGTGAAGTGGACATGCATGTGCTAGAACATCTTTCCTTGTACTGAGGAATGATAAAGCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS CCA 90 bp TTCAGAGCCCCCAAGACACAGACGCTAGCATCATGCCATTTCATCTaGGATTGGCACCTTGTATGTTCCCAATTTGTCCCCAGAGACAGT +
Preference number: 5 (lower is better)
Translates to: FRAPKTQTLASCHFI*DWHLVCSQFVPRDS
Trigger: ACTGTCTCTGGGGACAAATTGGGAACATACAAGGTGCCAATCCCAGATGAAATGGCATGATGCTAGCGTCTGTGTCTTGGGGGCTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS GCA 90 bp AGACCTGGAGTATTCAGAGCCCCCAAGACACAGACGCTAGCATCATaGCATTTCATCTGGGATTGGCACCTTGTATGTTCCCAATTTGTC +
Preference number: 5 (lower is better)
Translates to: RPGVFRAPKTQTLAS*HFIWDWHLVCSQFV
Trigger: GACAAATTGGGAACATACAAGGTGCCAATCCCAGATGAAATGGCATGATGCTAGCGTCTGTGTCTTGGGGGCTCTGAATACTCCAGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS TCA 90 bp CTGTACAAGAATAATGCAATACATTATCATGGCTCTCCTCTTACATaGAGCCCGCAGTGGAGAGCTGGGCATGCTCCTGATCTCATCGAA +
Preference number: 5 (lower is better)
Translates to: LYKNNAIHYHGSPLT*SPQWRAGHAPDLIE
Trigger: TTCGATGAGATCAGGAGCATGCCCAGCTCTCCACTGCGGGCTTCATGTAAGAGGAGAGCCATGATAATGTATTGCATTATTCTTGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656853.1
CDS TCA 90 bp TCCTGTAACTTCAAAGCCCATGATTGTTCCTGTTTTGGGAAGCTATaGGGTCAGGGGAAGGTAATACAGGATGCGATACATTGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: SCNFKAHDCSCFGKL*GQGKVIQDAIHCLP
Trigger: AGGAAGGCAATGTATCGCATCCTGTATTACCTTCCCCTGACCTCATAGCTTCCCAAAACAGGAACAATCATGGGCTTTGAAGTTACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654333.1
CDS TCA 90 bp TTGTTGGATTCAAATATGTCCATATGGCCGCCAGCCATGTTCTATTaGAGTGGTTTGCCTGTTAGTGCTCAGCTTGTAGAAGCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LLDSNMSIWPPAMFY*SGLPVSAQLVEAFS
Trigger: GCTGAAGGCTTCTACAAGCTGAGCACTAACAGGCAAACCACTTCAATAGAACATGGCTGGCGGCCATATGGACATATTTGAATCCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656512.1
CDS TCA 90 bp TCCTGTAACTTCAAAGCCCATGATTGTTCCTGTTTTGGGAAGCTATaGGGTCAGGGGAAGGTAATACAGGATGCGATACATTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: SCNFKAHDCSCFGKL*GQGKVIQDAIHCLP
Trigger: TGGAAGGCAATGTATCGCATCCTGTATTACCTTCCCCTGACCTCATAGCTTCCCAAAACAGGAACAATCATGGGCTTTGAAGTTACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000670652.1
CDS TCA 90 bp TCTTCATTCTTCAAAGCCCATGATTGTTCCTGTTTTGGGAAGCTATaGGGTCAGGGGAAGGTAATACAGGATGCGATACATTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: SSFFKAHDCSCFGKL*GQGKVIQDAIHCLP
Trigger: TGGAAGGCAATGTATCGCATCCTGTATTACCTTCCCCTGACCTCATAGCTTCCCAAAACAGGAACAATCATGGGCTTTGAAGAATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664849.1
CDS TCA 90 bp GCTTTACTACTAGTTTTACTACTAGGACATTCTGAGTGGAGATATTaGTCTCCTCAGTCCTCAGGGGCAGAACCAGACCTGGAGTATTCA +
Preference number: 5 (lower is better)
Translates to: ALLLVLLLGHSEWRY*SPQSSGAEPDLEYS
Trigger: TGAATACTCCAGGTCTGGTTCTGCCCCTGAGGACTGAGGAGATCAATATCTCCACTCAGAATGTCCTAGTAGTAAAACTAGTAGTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS TCA 90 bp TCCTGTAACTTCAAAGCCCATGATTGTTCCTGTTTTGGGAAGCTATaGGGTCAGGGGAAGGTAATACAGGATGCGATACATTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SCNFKAHDCSCFGKL*GQGKVIQDAIHCLL
Trigger: AAGAAGGCAATGTATCGCATCCTGTATTACCTTCCCCTGACCTCATAGCTTCCCAAAACAGGAACAATCATGGGCTTTGAAGTTACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667443.1
CDS CCA 90 bp AATCTGGCCACTCTCCGTGCATCTAGAGTCCTAAGAGGAATTTGCTaGTCGACTGAACTGTCCACAGTTATCCAACAAACACTTATTGTA +
Preference number: 5 (lower is better)
Translates to: NLATLRASRVLRGIC*STELSTVIQQTLIV
Trigger: TACAATAAGTGTTTGTTGGATAACTGTGGACAGTTCAGTCGACCAGCAAATTCCTCTTAGGACTCTAGATGCACGGAGAGTGGCCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000654333.1
ENST00000659294.1
CDS CCA 90 bp GCTATATTCTGTAGCAGTCGCTGTCAAAGTATTCTTCCCCACCAGTaGCATCAACATCTCCTGGACACTTCTCACAAATGCAGATTCTTA +
Preference number: 5 (lower is better)
Translates to: AIFCSSRCQSILPHQ*HQHLLDTSHKCRFL
Trigger: TAAGAATCTGCATTTGTGAGAAGTGTCCAGGAGATGTTGATGCCACTGGTGGGGAAGAATACTTTGACAGCGACTGCTACAGAATATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS TCA 90 bp CCTGGAATGGCACATTCAAAACTTGCCACAAGCAGCTTTCTTTGCTaGATTAATTGTTGGATTCAAATATGTCCATATGGCCGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: PGMAHSKLATSSFLC*INCWIQICPYGRQP
Trigger: TGGCTGGCGGCCATATGGACATATTTGAATCCAACAATTAATTCAGCAAAGAAAGCTGCTTGTGGCAAGTTTTGAATGTGCCATTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000656512.1
ENST00000659294.1
ENST00000659629.1
ENST00000661458.1
CDS TCA 90 bp CTATTTCAACAAGCCTTAACAGGGATCCTGACACACACTGAAGTTTaGGAAACCCTGGCCCAGAGCTTTACTACTAGTTTTACTACTAGG +
Preference number: 5 (lower is better)
Translates to: LFQQALTGILTHTEV*ETLAQSFTTSFTTR
Trigger: CCTAGTAGTAAAACTAGTAGTAAAGCTCTGGGCCAGGGTTTCTCAAACTTCAGTGTGTGTCAGGATCCCTGTTAAGGCTTGTTGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS TCA 90 bp TCTTCATTCTTCAAAGCCCATGATTGTTCCTGTTTTGGGAAGCTATaGGGTCAGGGGAAGGTAATACAGGATGCGATACATTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SSFFKAHDCSCFGKL*GQGKVIQDAIHCLL
Trigger: AAGAAGGCAATGTATCGCATCCTGTATTACCTTCCCCTGACCTCATAGCTTCCCAAAACAGGAACAATCATGGGCTTTGAAGAATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667922.1
CDS GCA 90 bp ATTAATCTGGCCACTCTCCGTGCATCTAGAGTCCTAAGAGGAATTTaGTGGTCGACTGAACTGTCCACAGTTATCCAACAAACACTTATT +
Preference number: 5 (lower is better)
Translates to: INLATLRASRVLRGI*WSTELSTVIQQTLI
Trigger: AATAAGTGTTTGTTGGATAACTGTGGACAGTTCAGTCGACCAGCAAATTCCTCTTAGGACTCTAGATGCACGGAGAGTGGCCAGATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000654333.1
ENST00000659294.1
CDS TCA 90 bp ATTCTTTACTTCAAAGCCCATGATTGTTCCTGTTTTGGGAAGCTATaGGGTCAGGGGAAGGTAATACAGGATGCGATACATTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: ILYFKAHDCSCFGKL*GQGKVIQDAIHCLL
Trigger: AAGAAGGCAATGTATCGCATCCTGTATTACCTTCCCCTGACCTCATAGCTTCCCAAAACAGGAACAATCATGGGCTTTGAAGTAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509968.1
ENST00000655323.1
ENST00000660997.1
CDS GCA 90 bp CCTTATTCATTAGGGTATAGACCAAGAGATTCTCAAAAGCACAGTTaGTTAAACAAGAGGGAAGTTTCCTTCTCTCACAGAGAGGCCCAT +
Preference number: 5 (lower is better)
Translates to: PYSLGYRPRDSQKHS*LNKREVSFSHREAH
Trigger: ATGGGCCTCTCTGTGAGAGAAGGAAACTTCCCTCTTGTTTAAGCAACTGTGCTTTTGAGAATCTCTTGGTCTATACCCTAATGAATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000512263.1
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000655323.1
ENST00000656512.1
ENST00000656853.1
ENST00000659294.1
ENST00000659629.1
ENST00000660997.1
ENST00000661458.1
ENST00000661951.1
ENST00000664651.1
ENST00000664849.1
ENST00000665435.1
ENST00000665681.1
ENST00000665923.1
ENST00000667443.1
ENST00000667922.1
ENST00000670652.1
ENST00000670956.1
CDS TCA 90 bp AGGATGCGATACATTGCCTTCTTTTTGTTTGTAGAAAGGGCATGGTaGGAACACCCCGGTCAAGAGATGTGTTTAAGAAGTGTGATTAAT +
Preference number: 5 (lower is better)
Translates to: RMRYIAFFLFVERAW*EHPGQEMCLRSVIN
Trigger: ATTAATCACACTTCTTAAACACATCTCTTGACCGGGGTGTTCTCACCATGCCCTTTCTACAAACAAAAAGAAGGCAATGTATCGCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509968.1
ENST00000667443.1
CDS TCA 90 bp AATCTATTTCCTAATAGGAGGGCAGCATGTAGAGAGCCAATGGGTTaGGGCAAGTCTCTGGAAATTTCAGTTTTAGAGGGTGATTTTCTT +
Preference number: 5 (lower is better)
Translates to: NLFPNRRAACREPMG*GKSLEISVLEGDFL
Trigger: AAGAAAATCACCCTCTAAAACTGAAATTTCCAGAGACTTGCCTCAACCCATTGGCTCTCTACATGCTGCCCTCCTATTAGGAAATAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656853.1
CDS CCA 90 bp TCTTTGCAATCTTCTCCTCATTTATCATCAAAGCACTACCTGGAATaGCACATTCAAAACTTGCCACAAGCAGCTTTCTTTGCTGAATTA +
Preference number: 5 (lower is better)
Translates to: SLQSSPHLSSKHYLE*HIQNLPQAAFFAEL
Trigger: TAATTCAGCAAAGAAAGCTGCTTGTGGCAAGTTTTGAATGTGCCATTCCAGGTAGTGCTTTGATGATAAATGAGGAGAAGATTGCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000656512.1
ENST00000659294.1
ENST00000659629.1
ENST00000661458.1
CDS CCA 72 bp ACGGCACGGCAGGGGCTCTGGGAAAGCGCAACAGTTTaGGGGTGCAGGGTGGGTCCTGACTCTGAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: TARQGLWESATV*GCRVGPDSESS
Trigger: TGAAGACTCAGAGTCAGGACCCACCCTGCACCCCCAAACTGTTGCGCTTTCCCAGAGCCCCTGCCGTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS CCA 72 bp CTAGAAAGTCAGGGAAGGACGGCACGGCAGGGGCTCTaGGAAAGCGCAACAGTTTGGGGGTGCAGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: LESQGRTARQGL*ESATVWGCRVG
Trigger: ACCCACCCTGCACCCCCAAACTGTTGCGCTTTCCCAGAGCCCCTGCCGTGCCGTCCTTCCCTGACTTTCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS GCA 72 bp CGGCAGGGGCTCTGGGAAAGCGCAACAGTTTGGGGGTaGAGGGTGGGTCCTGACTCTGAGTCTTCATGTAGG +
Preference number: 6 (lower is better)
Translates to: RQGLWESATVWG*RVGPDSESSCR
Trigger: CCTACATGAAGACTCAGAGTCAGGACCCACCCTGCACCCCCAAACTGTTGCGCTTTCCCAGAGCCCCTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS TCA 72 bp AACCCCTTGAGGAAACAAAGGCACCTTGGGGGCCATTaGGAACTCCTGACGAAGAGGGCTCAGCTGCCAGAC +
Preference number: 6 (lower is better)
Translates to: NPLRKQRHLGGH*ELLTKRAQLPD
Trigger: GTCTGGCAGCTGAGCCCTCTTCGTCAGGAGTTCTCAATGGCCCCCAAGGTGCCTTTGTTTCCTCAAGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000664849.1
CDS TCA 72 bp GGAGAGCTGGGCATGCTCCTGATCTCATCGAATACCTaGGGTCGCGAGTTTGAGGCCAGCTTCACCAACAGG +
Preference number: 6 (lower is better)
Translates to: GELGMLLISSNT*GREFEASFTNR
Trigger: CCTGTTGGTGAAGCTGGCCTCAAACTCGCGACCTCAGGTATTCGATGAGATCAGGAGCATGCCCAGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656853.1
CDS TCA 72 bp GCTCCTGATCTCATCGAATACCTGAGGTCGCGAGTTTaGGGCCAGCTTCACCAACAGGGAGAAACCCCGTCT +
Preference number: 6 (lower is better)
Translates to: APDLIEYLRSRV*GQLHQQGETPS
Trigger: AGACGGGGTTTCTCCCTGTTGGTGAAGCTGGCCTCAAACTCGCGACCTCAGGTATTCGATGAGATCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656853.1
CDS TCA 72 bp TACATGAAGCCCGCAGTGGAGAGCTGGGCATGCTCCTaGTCTCATCGAATACCTGAGGTCGCGAGTTTGAGG +
Preference number: 6 (lower is better)
Translates to: YMKPAVESWACS*SHRIPEVASLR
Trigger: CCTCAAACTCGCGACCTCAGGTATTCGATGAGATCAGGAGCATGCCCAGCTCTCCACTGCGGGCTTCATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656853.1
CDS CAA 72 bp AAACCCCTTGAGGAAACAAAGGCACCTTGGGGGCCATaGAGAACTCCTGACGAAGAGGGCTCAGCTGCCAGA +
Preference number: 6 (lower is better)
Translates to: KPLEETKAPWGP*RTPDEEGSAAR
Trigger: TCTGGCAGCTGAGCCCTCTTCGTCAGGAGTTCTCAATGGCCCCCAAGGTGCCTTTGTTTCCTCAAGGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000664849.1
CDS CCA 72 bp AAGTTTCCTTCTCTCACAGAGAGGCCCATTGTGAGCTaGCAGTCCAGGCCACGTAGGTGTCTATGCTCCACA +
Preference number: 6 (lower is better)
Translates to: KFPSLTERPIVS*QSRPRRCLCST
Trigger: TGTGGAGCATAGACACCTACGTGGCCTGGACTGCCAGCTCACAATGGGCCTCTCTGTGAGAGAAGGAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000509968.1
ENST00000512263.1
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000655323.1
ENST00000656512.1
ENST00000656853.1
ENST00000659294.1
ENST00000659629.1
ENST00000660997.1
ENST00000661458.1
ENST00000661951.1
ENST00000664651.1
ENST00000664849.1
ENST00000665435.1
ENST00000665681.1
ENST00000665923.1
ENST00000667443.1
ENST00000667922.1
ENST00000670652.1
ENST00000670956.1
CDS CCA 72 bp TGTTCATTTCATGCCTTTGATCCAGCTGTTAGGAAATaGGCTCTCCCTTCGGAGGAAGCACGAGGTGCCACC +
Preference number: 6 (lower is better)
Translates to: CSFHAFDPAVRK*ALPSEEARGAT
Trigger: GGTGGCACCTCGTGCTTCCTCCGAAGGGAGAGCCCATTTCCTAACAGCTGGATCAAAGGCATGAAATGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000509968.1
ENST00000512263.1
ENST00000655323.1
ENST00000660997.1
ENST00000661951.1
ENST00000664651.1
ENST00000664849.1
ENST00000665681.1
ENST00000665923.1
ENST00000667922.1
CDS CAA 72 bp AGGGAGCTGATGAAGCTTGTATCCCATGTACTAAAGTaGCAGGGCAGAGAGCTCAGTGCAGAGAGCCCAAGA +
Preference number: 6 (lower is better)
Translates to: RELMKLVSHVLK*QGRELSAESPR
Trigger: TCTTGGGCTCTCTGCACTGAGCTCTCTGCCCTGCAACTTTAGTACATGGGATACAAGCTTCATCAGCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS GCA 72 bp TGGGAAGCTATGAGGTCAGGGGAAGGTAATACAGGATaGGATACATTGCCTTCCACAGCTGAGGATGCTATG +
Preference number: 6 (lower is better)
Translates to: WEAMRSGEGNTG*DTLPSTAEDAM
Trigger: CATAGCATCCTCAGCTGTGGAAGGCAATGTATCGCATCCTGTATTACCTTCCCCTGACCTCATAGCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664849.1
ENST00000670652.1
CDS GCA 72 bp GTATTCAGAGCCCCCAAGACACAGACGCTAGCATCATaGCATTTCATCTGGGATTGGCACCTTGTATGTTCC +
Preference number: 6 (lower is better)
Translates to: VFRAPKTQTLAS*HFIWDWHLVCS
Trigger: GGAACATACAAGGTGCCAATCCCAGATGAAATGGCATGATGCTAGCGTCTGTGTCTTGGGGGCTCTGAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS GCA 72 bp CAGTGGCATCAACATCTCCTGGACACTTCTCACAAATaGAGATTCTTAAGCAGCACCCCAGGCCTACCCATT +
Preference number: 6 (lower is better)
Translates to: QWHQHLLDTSHK*RFLSSTPGLPI
Trigger: AATGGGTAGGCCTGGGGTGCTGCTTAAGAATCTGCATTTGTGAGAAGTGTCCAGGAGATGTTGATGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS CAA 90 bp CATCATGCCATTTCATCTGGGATTGGCACCTTGTATGTTCCCAATTaGTCCCCAGAGACAGTAAGCAGGATGGGCATCATCCAGCGCTTT +
Preference number: 6 (lower is better)
Translates to: HHAISSGIGTLYVPN*SPETVSRMGIIQRF
Trigger: AAAGCGCTGGATGATGCCCATCCTGCTTACTGTCTCTGGGGACAAATTGGGAACATACAAGGTGCCAATCCCAGATGAAATGGCATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS GCA 72 bp GCCACTCTCCGTGCATCTAGAGTCCTAAGAGGAATTTaGTGGTCGACTGAACTGTCCACAGTTATCCAACAA +
Preference number: 6 (lower is better)
Translates to: ATLRASRVLRGI*WSTELSTVIQQ
Trigger: TTGTTGGATAACTGTGGACAGTTCAGTCGACCAGCAAATTCCTCTTAGGACTCTAGATGCACGGAGAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000654333.1
ENST00000659294.1
CDS CCA 72 bp TGTAGCAGTCGCTGTCAAAGTATTCTTCCCCACCAGTaGCATCAACATCTCCTGGACACTTCTCACAAATGC +
Preference number: 6 (lower is better)
Translates to: CSSRCQSILPHQ*HQHLLDTSHKC
Trigger: GCATTTGTGAGAAGTGTCCAGGAGATGTTGATGCCACTGGTGGGGAAGAATACTTTGACAGCGACTGCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS CAA 72 bp CTTCATCTTCAGGGACTCCATGTTCATTTCATGCCTTaGATCCAGCTGTTAGGAAATGGGCTCTCCCTTCGG +
Preference number: 6 (lower is better)
Translates to: LHLQGLHVHFMP*IQLLGNGLSLR
Trigger: CCGAAGGGAGAGCCCATTTCCTAACAGCTGGATCAAAGGCATGAAATGAACATGGAGTCCCTGAAGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000509968.1
ENST00000512263.1
ENST00000655323.1
ENST00000660997.1
ENST00000661951.1
ENST00000664651.1
ENST00000664849.1
ENST00000665681.1
ENST00000665923.1
ENST00000667922.1
CDS CAA 72 bp GACACAGACGCTAGCATCATGCCATTTCATCTGGGATaGGCACCTTGTATGTTCCCAATTTGTCCCCAGAGA +
Preference number: 6 (lower is better)
Translates to: DTDASIMPFHLG*APCMFPICPQR
Trigger: TCTCTGGGGACAAATTGGGAACATACAAGGTGCCAATCCCAGATGAAATGGCATGATGCTAGCGTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS TCA 72 bp CTAGTTTTACTACTAGGACATTCTGAGTGGAGATATTaGTCTCCTCAGTCCTCAGGGGCAGAACCAGACCTG +
Preference number: 6 (lower is better)
Translates to: LVLLLGHSEWRY*SPQSSGAEPDL
Trigger: CAGGTCTGGTTCTGCCCCTGAGGACTGAGGAGATCAATATCTCCACTCAGAATGTCCTAGTAGTAAAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS TCA 72 bp AATAATGCAATACATTATCATGGCTCTCCTCTTACATaGAGCCCGCAGTGGAGAGCTGGGCATGCTCCTGAT +
Preference number: 6 (lower is better)
Translates to: NNAIHYHGSPLT*SPQWRAGHAPD
Trigger: ATCAGGAGCATGCCCAGCTCTCCACTGCGGGCTTCATGTAAGAGGAGAGCCATGATAATGTATTGCATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656853.1
CDS TCA 72 bp CCTAATAGGAGGGCAGCATGTAGAGAGCCAATGGGTTaGGGCAAGTCTCTGGAAATTTCAGTTTTAGAGGGT +
Preference number: 6 (lower is better)
Translates to: PNRRAACREPMG*GKSLEISVLEG
Trigger: ACCCTCTAAAACTGAAATTTCCAGAGACTTGCCTCAACCCATTGGCTCTCTACATGCTGCCCTCCTATTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656853.1
CDS GCA 72 bp TGGGAAGCTATGAGGTCAGGGGAAGGTAATACAGGATaGGATACATTGCCTTCCTCTGCTATTCTAGATGTG +
Preference number: 6 (lower is better)
Translates to: WEAMRSGEGNTG*DTLPSSAILDV
Trigger: CACATCTAGAATAGCAGAGGAAGGCAATGTATCGCATCCTGTATTACCTTCCCCTGACCTCATAGCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654333.1
CDS GCA 72 bp TGGGAAGCTATGAGGTCAGGGGAAGGTAATACAGGATaGGATACATTGCCTTCTTCAGTAACACCCATCCAT +
Preference number: 6 (lower is better)
Translates to: WEAMRSGEGNTG*DTLPSSVTPIH
Trigger: ATGGATGGGTGTTACTGAAGAAGGCAATGTATCGCATCCTGTATTACCTTCCCCTGACCTCATAGCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660997.1
ENST00000667922.1
CDS CAA 72 bp ATTTCATCTGGGATTGGCACCTTGTATGTTCCCAATTaGTCCCCAGAGACAGTAAGCAGGATGGGCATCATC +
Preference number: 6 (lower is better)
Translates to: ISSGIGTLYVPN*SPETVSRMGII
Trigger: GATGATGCCCATCCTGCTTACTGTCTCTGGGGACAAATTGGGAACATACAAGGTGCCAATCCCAGATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS CCA 72 bp ACTCTCCGTGCATCTAGAGTCCTAAGAGGAATTTGCTaGTCGACTGAACTGTCCACAGTTATCCAACAAACA +
Preference number: 6 (lower is better)
Translates to: TLRASRVLRGIC*STELSTVIQQT
Trigger: TGTTTGTTGGATAACTGTGGACAGTTCAGTCGACCAGCAAATTCCTCTTAGGACTCTAGATGCACGGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000654333.1
ENST00000659294.1
CDS CCA 72 bp GTTTGTTACATGGACATATTGCATGATGCTGAGGTTTaGGCTTCAGTTGAGCCCCTCACCCAAATAGTGAAC +
Preference number: 6 (lower is better)
Translates to: VCYMDILHDAEV*ASVEPLTQIVN
Trigger: GTTCACTATTTGGGTGAGGGGCTCAACTGAAGCCCAAACCTCAGCATCATGCAATATGTCCATGTAACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS CAA 90 bp CCCAATAGGTGGTTTTTCCACCCTTGCCCATCTCCCTCTTCTTTTTaGGAGTCCTCAGTGTTTATTGTTCCTATCTGTAGGCCCATATAT +
Preference number: 6 (lower is better)
Translates to: PNRWFFHPCPSPSSF*ESSVFIVPICRPIY
Trigger: ATATATGGGCCTACAGATAGGAACAATAAACACTGAGGACTCCAAAAAAGAAGAGGGAGATGGGCAAGGGTGGAAAAACCACCTATTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS TCA 72 bp TTCAAAGCCCATGATTGTTCCTGTTTTGGGAAGCTATaGGGTCAGGGGAAGGTAATACAGGATGCGATACAT +
Preference number: 6 (lower is better)
Translates to: FKAHDCSCFGKL*GQGKVIQDAIH
Trigger: ATGTATCGCATCCTGTATTACCTTCCCCTGACCTCATAGCTTCCCAAAACAGGAACAATCATGGGCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000509968.1
ENST00000654333.1
ENST00000655323.1
ENST00000660997.1
ENST00000664849.1
ENST00000667443.1
ENST00000667922.1
ENST00000670652.1
CDS GCA 72 bp TTCTATATTGATTCACTTAGAATAATGGCCTCCAGCTaGATCCATGCTGCCGCAGAGGACATCATTTTGTTT +
Preference number: 6 (lower is better)
Translates to: FYIDSLRIMASS*IHAAAEDIILF
Trigger: AAACAAAATGATGTCCTCTGCGGCAGCATGGATGCAGCTGGAGGCCATTATTCTAAGTGAATCAATATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1
CDS GCA 72 bp TTAGGGTATAGACCAAGAGATTCTCAAAAGCACAGTTaGTTAAACAAGAGGGAAGTTTCCTTCTCTCACAGA +
Preference number: 6 (lower is better)
Translates to: LGYRPRDSQKHS*LNKREVSFSHR
Trigger: TCTGTGAGAGAAGGAAACTTCCCTCTTGTTTAAGCAACTGTGCTTTTGAGAATCTCTTGGTCTATACCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000512263.1
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000655323.1
ENST00000656512.1
ENST00000656853.1
ENST00000659294.1
ENST00000659629.1
ENST00000660997.1
ENST00000661458.1
ENST00000661951.1
ENST00000664651.1
ENST00000664849.1
ENST00000665435.1
ENST00000665681.1
ENST00000665923.1
ENST00000667443.1
ENST00000667922.1
ENST00000670652.1
ENST00000670956.1
CDS CCA 72 bp TCTTCTCCTCATTTATCATCAAAGCACTACCTGGAATaGCACATTCAAAACTTGCCACAAGCAGCTTTCTTT +
Preference number: 6 (lower is better)
Translates to: SSPHLSSKHYLE*HIQNLPQAAFF
Trigger: AAAGAAAGCTGCTTGTGGCAAGTTTTGAATGTGCCATTCCAGGTAGTGCTTTGATGATAAATGAGGAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000656512.1
ENST00000659294.1
ENST00000659629.1
ENST00000661458.1
CDS CAA 72 bp TCATCAAAGCACTACCTGGAATGGCACATTCAAAACTaGCCACAAGCAGCTTTCTTTGCTGAATTAATTGTT +
Preference number: 6 (lower is better)
Translates to: SSKHYLEWHIQN*PQAAFFAELIV
Trigger: AACAATTAATTCAGCAAAGAAAGCTGCTTGTGGCAAGTTTTGAATGTGCCATTCCAGGTAGTGCTTTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000656512.1
ENST00000659294.1
ENST00000659629.1
ENST00000661458.1
CDS CAA 90 bp CCTCATTTATCATCAAAGCACTACCTGGAATGGCACATTCAAAACTaGCCACAAGCAGCTTTCTTTGCTGAATTAATTGTTGGATTCAAA +
Preference number: 6 (lower is better)
Translates to: PHLSSKHYLEWHIQN*PQAAFFAELIVGFK
Trigger: TTTGAATCCAACAATTAATTCAGCAAAGAAAGCTGCTTGTGGCAAGTTTTGAATGTGCCATTCCAGGTAGTGCTTTGATGATAAATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000654333.1
ENST00000654653.1
ENST00000654916.1
ENST00000656512.1
ENST00000659294.1
ENST00000659629.1
ENST00000661458.1
CDS CCA 72 bp TTGTTCCTATCTGTAGGCCCATATATACCCAGTATTTaGCTTCCACTTATAAGTGAAAACATGTGGTATTTG +
Preference number: 6 (lower is better)
Translates to: LFLSVGPYIPSI*LPLISENMWYL
Trigger: CAAATACCACATGTTTTCACTTATAAGTGGAAGCCAAATACTGGGTATATATGGGCCTACAGATAGGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660497.1
ENST00000665324.1