Pregenerated sensors for LINC02268 (Homo sapiens)
Ensembl gene IDs: ENSG00000248174Ensembl transcript IDs: ENST00000503140.1, ENST00000515444.5, ENST00000656529.1, ENST00000662272.1, ENST00000666320.1, ENST00000670219.1, ENST00000671681.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACCCAGATGAAGAAGACAGGCTTCAGAGGCCAGGTGCCTCCAGCTaGCCTCCTGTACTTCCAGCCACCACAGCTGCATCTCCATCCCCG | + |
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Preference number: 5 (lower is better) Translates to: HPDEEDRLQRPGASS*PPVLPATTAASPSP Trigger: CGGGGATGGAGATGCAGCTGTGGTGGCTGGAAGTACAGGAGGGCAGCTGGAGGCACCTGGCCTCTGAAGCCTGTCTTCTTCATCTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000515444.5 ENST00000671681.1 |
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| CDS TCA 90 bp | GCTATCCCTTCCCTAGCCCCCGACCCTCTGACAGGCCCTGGTGTGTaGTGTTCCCTCCCGGTATTCATGTGTTCTCATTGTTCAACTCCC | + |
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Preference number: 5 (lower is better) Translates to: AIPSLAPDPLTGPGV*CSLPVFMCSHCSTP Trigger: GGGAGTTGAACAATGAGAACACATGAATACCGGGAGGGAACATCACACACCAGGGCCTGTCAGAGGGTCGGGGGCTAGGGAAGGGATAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671681.1 |
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| CDS GCA 90 bp | CCTCCTGTACTTCCAGCCACCACAGCTGCATCTCCATCCCCGCACTaGACTCCAGTGCTCTCCCTTTCATACTCTAGTAAAATCTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: PPVLPATTAASPSPH*TPVLSLSYSSKILA Trigger: AGCTAAGATTTTACTAGAGTATGAAAGGGAGAGCACTGGAGTGCAGTGCGGGGATGGAGATGCAGCTGTGGTGGCTGGAAGTACAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000515444.5 ENST00000671681.1 |
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| CDS TCA 90 bp | AATCCCATTCATCCAGTAGGAACTACCTGGGCAGTTGAAACGATGTaGCAGCTCCATTCTCTCTGTTGTGGACATCTCTACTTAGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: NPIHPVGTTWAVETM*QLHSLCCGHLYLGG Trigger: CCCACCTAAGTAGAGATGTCCACAACAGAGAGAATGGAGCTGTCACATCGTTTCAACTGCCCAGGTAGTTCCTACTGGATGAATGGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503140.1 ENST00000662272.1 ENST00000666320.1 ENST00000670219.1 ENST00000671681.1 |
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| CDS GCA 90 bp | CTGAATTCCCAATCTTTCCGTGCCTCTCACACCACACTCAGTAATTaGCTGTTGCTTTTACTTACACAGACACTCCTAATCACTGACTTC | + |
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Preference number: 5 (lower is better) Translates to: LNSQSFRASHTTLSN*LLLLLTQTLLITDF Trigger: GAAGTCAGTGATTAGGAGTGTCTGTGTAAGTAAAAGCAACAGGCAATTACTGAGTGTGGTGTGAGAGGCACGGAAAGATTGGGAATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000503140.1 ENST00000515444.5 ENST00000662272.1 ENST00000666320.1 ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 90 bp | GTAATGGGATTGCTCGGTCAAATGGCATTTCTGGTTCTAGATCCTTaGGGAATCTCCACACAGTCTTCCACAATTGCTGAACTAATTTAC | + |
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Preference number: 5 (lower is better) Translates to: VMGLLGQMAFLVLDP*GISTQSSTIAELIY Trigger: GTAAATTAGTTCAGCAATTGTGGAAGACTGTGTGGAGATTCCTCAAGGATCTAGAACCAGAAATGCCATTTGACCGAGCAATCCCATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 90 bp | CGATCATTGATGGGCATTTGCATTGGTTCCAAGTCTTTGCTATTGTaGACAGTGCTGCAATCAACATACAGGTGGATGTGTCTCTATAGT | + |
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Preference number: 5 (lower is better) Translates to: RSLMGICIGSKSLLL*TVLQSTYRWMCLYS Trigger: ACTATAGAGACACATCCACCTGTATGTTGATTGCAGCACTGTTCACAATAGCAAAGACTTGGAACCAATGCAAATGCCCATCAATGATCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 90 bp | GGTTCTAGATCCTTGAGGAATCTCCACACAGTCTTCCACAATTGCTaGACTAATTTACACTCCTACCAACAGTGTAAAAGCATTCCTATC | + |
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Preference number: 5 (lower is better) Translates to: GSRSLRNLHTVFHNC*TNLHSYQQCKSIPI Trigger: GATAGGAATGCTTTTACACTGTTGGTAGGAGTGTAAATTAGTTCAGCAATTGTGGAAGACTGTGTGGAGATTCCTCAAGGATCTAGAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS CCA 90 bp | TCATGTGTTCTCATTGTTCAACTCCCACTTATGAGTGAGAACATGTaGTGTTTGGCATTCTGTTCCTGTATTAGTTTGCAGAGAATGATG | + |
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Preference number: 5 (lower is better) Translates to: SCVLIVQLPLMSENM*CLAFCSCISLQRMM Trigger: CATCATTCTCTGCAAACTAATACAGGAACAGAATGCCAAACACCACATGTTCTCACTCATAAGTGGGAGTTGAACAATGAGAACACATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 90 bp | TCTCTTCATTGCTTTCTGAAGGAGTCTTATCAATGTAACAAGAACTaGAATTGTGACTGGTCCTTGTTGTCGTTTACAGTACAGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: SLHCFLKESYQCNKN*NCDWSLLSFTVQRS Trigger: AGATCTCTGTACTGTAAACGACAACAAGGACCAGTCACAATTTCAGTTCTTGTTACATTGATAAGACTCCTTCAGAAAGCAATGAAGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515444.5 |
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| CDS CCA 90 bp | TTCTGTGAAGAAAGAGCTATGATGACTAAATGTAATGCCTTAGGATaGGTGGGATTACTTGAGAAAAGCTTTTATTGGAAGAGTACTAGT | + |
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Preference number: 5 (lower is better) Translates to: FCEERAMMTKCNALG*VGLLEKSFYWKSTS Trigger: ACTAGTACTCTTCCAATAAAAGCTTTTCTCAAGTAATCCCACCCATCCTAAGGCATTACATTTAGTCATCATAGCTCTTTCTTCACAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670219.1 |
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| CDS GCA 72 bp | GAAGAAGACAGGCTTCAGAGGCCAGGTGCCTCCAGCTaGCCTCCTGTACTTCCAGCCACCACAGCTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: EEDRLQRPGASS*PPVLPATTAAS Trigger: AGATGCAGCTGTGGTGGCTGGAAGTACAGGAGGGCAGCTGGAGGCACCTGGCCTCTGAAGCCTGTCTTCTTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515444.5 ENST00000671681.1 |
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| CDS CCA 72 bp | TATCCCTTCCCTAGCCCCCGACCCTCTGACAGGCCCTaGTGTGTGATGTTCCCTCCCGGTATTCATGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: YPFPSPRPSDRP*CVMFPPGIHVF Trigger: GAACACATGAATACCGGGAGGGAACATCACACACCAGGGCCTGTCAGAGGGTCGGGGGCTAGGGAAGGGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671681.1 |
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| CDS TCA 72 bp | TCCCTAGCCCCCGACCCTCTGACAGGCCCTGGTGTGTaGTGTTCCCTCCCGGTATTCATGTGTTCTCATTGT | + |
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Preference number: 6 (lower is better) Translates to: SLAPDPLTGPGV*CSLPVFMCSHC Trigger: ACAATGAGAACACATGAATACCGGGAGGGAACATCACACACCAGGGCCTGTCAGAGGGTCGGGGGCTAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671681.1 |
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| CDS GCA 72 bp | CTTCCAGCCACCACAGCTGCATCTCCATCCCCGCACTaGACTCCAGTGCTCTCCCTTTCATACTCTAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: LPATTAASPSPH*TPVLSLSYSSK Trigger: TTTACTAGAGTATGAAAGGGAGAGCACTGGAGTGCAGTGCGGGGATGGAGATGCAGCTGTGGTGGCTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000515444.5 ENST00000671681.1 |
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| CDS TCA 72 bp | CATCCAGTAGGAACTACCTGGGCAGTTGAAACGATGTaGCAGCTCCATTCTCTCTGTTGTGGACATCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: HPVGTTWAVETM*QLHSLCCGHLY Trigger: GTAGAGATGTCCACAACAGAGAGAATGGAGCTGTCACATCGTTTCAACTGCCCAGGTAGTTCCTACTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503140.1 ENST00000662272.1 ENST00000666320.1 ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 72 bp | CCCAAGACTTTGGGAGGCAATGATGGGAGGATCACTTaGGGCAAGGAGTTTAAAACCAGCCTGGTCAACATA | + |
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Preference number: 6 (lower is better) Translates to: PKTLGGNDGRIT*GKEFKTSLVNI Trigger: TATGTTGACCAGGCTGGTTTTAAACTCCTTGCCTCAAGTGATCCTCCCATCATTGCCTCCCAAAGTCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515444.5 |
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| CDS CAA 90 bp | TGTGAAACTGTTTCTCAGGTCATGATGCTTCTTAGGTCTTTATCCTaGCAGCAGGAAGTCCTTCCTGACTCCAGCAGATCTCACCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: CETVSQVMMLLRSLS*QQEVLPDSSRSHPD Trigger: ATCTGGGTGAGATCTGCTGGAGTCAGGAAGGACTTCCTGCTGCAAGGATAAAGACCTAAGAAGCATCATGACCTGAGAAACAGTTTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515444.5 |
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| CDS TCA 72 bp | TGCCAAGAGTGGCCTGTGAAACTGTTTCTCAGGTCATaGTGCTTCTTAGGTCTTTATCCTTGCAGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: CQEWPVKLFLRS*CFLGLYPCSRK Trigger: CTTCCTGCTGCAAGGATAAAGACCTAAGAAGCATCATGACCTGAGAAACAGTTTCACAGGCCACTCTTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515444.5 |
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| CDS CAA 90 bp | TCCCAATCTTTCCGTGCCTCTCACACCACACTCAGTAATTGCCTGTaGCTTTTACTTACACAGACACTCCTAATCACTGACTTCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SQSFRASHTTLSNCL*LLLTQTLLITDFSF Trigger: AAAGCTGAAGTCAGTGATTAGGAGTGTCTGTGTAAGTAAAAGCAACAGGCAATTACTGAGTGTGGTGTGAGAGGCACGGAAAGATTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000503140.1 ENST00000515444.5 ENST00000662272.1 ENST00000666320.1 ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 72 bp | TTGCTCGGTCAAATGGCATTTCTGGTTCTAGATCCTTaGGGAATCTCCACACAGTCTTCCACAATTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LLGQMAFLVLDP*GISTQSSTIAE Trigger: TTCAGCAATTGTGGAAGACTGTGTGGAGATTCCTCAAGGATCTAGAACCAGAAATGCCATTTGACCGAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS GCA 72 bp | CAATCTTTCCGTGCCTCTCACACCACACTCAGTAATTaGCTGTTGCTTTTACTTACACAGACACTCCTAATC | + |
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Preference number: 6 (lower is better) Translates to: QSFRASHTTLSN*LLLLLTQTLLI Trigger: GATTAGGAGTGTCTGTGTAAGTAAAAGCAACAGGCAATTACTGAGTGTGGTGTGAGAGGCACGGAAAGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000503140.1 ENST00000515444.5 ENST00000662272.1 ENST00000666320.1 ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 72 bp | ATGGGCATTTGCATTGGTTCCAAGTCTTTGCTATTGTaGACAGTGCTGCAATCAACATACAGGTGGATGTGT | + |
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Preference number: 6 (lower is better) Translates to: MGICIGSKSLLL*TVLQSTYRWMC Trigger: ACACATCCACCTGTATGTTGATTGCAGCACTGTTCACAATAGCAAAGACTTGGAACCAATGCAAATGCCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 72 bp | GTTTGGCATTCTGTTCCTGTATTAGTTTGCAGAGAATaGTGGTTTCCAGCTTCATCCATATCCCTGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: VWHSVPVLVCRE*WFPASSISLQR Trigger: CCTTTGCAGGGATATGGATGAAGCTGGAAACCATCATTCTCTGCAAACTAATACAGGAACAGAATGCCAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS CCA 72 bp | GTTGCTTTAGTCATTTGCCCATGTCTGTGTCCTCAATaGTATTGCCTAGGTATTCTTCTAGGGTTTCTATGG | + |
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Preference number: 6 (lower is better) Translates to: VALVICPCLCPQ*YCLGILLGFLW Trigger: CCATAGAAACCCTAGAAGAATACCTAGGCAATACCATTGAGGACACAGACATGGGCAAATGACTAAAGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656529.1 ENST00000670219.1 ENST00000671681.1 |
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| CDS CCA 72 bp | GAAAGAGCTATGATGACTAAATGTAATGCCTTAGGATaGGTGGGATTCTTTATCCTTGCAGCAGGAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: ERAMMTKCNALG*VGFFILAAGSP Trigger: AGGACTTCCTGCTGCAAGGATAAAGAATCCCACCCATCCTAAGGCATTACATTTAGTCATCATAGCTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671681.1 |
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| CDS CCA 72 bp | TTCTTTATCCAGCCGATCATTGATGGGCATTTGCATTaGTTCCAAGTCTTTGCTATTGTGAACAGTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: FFIQPIIDGHLH*FQVFAIVNSAA Trigger: TGCAGCACTGTTCACAATAGCAAAGACTTGGAACCAATGCAAATGCCCATCAATGATCGGCTGGATAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 72 bp | TCCTTGAGGAATCTCCACACAGTCTTCCACAATTGCTaGACTAATTTACACTCCTACCAACAGTGTAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SLRNLHTVFHNC*TNLHSYQQCKS Trigger: GCTTTTACACTGTTGGTAGGAGTGTAAATTAGTTCAGCAATTGTGGAAGACTGTGTGGAGATTCCTCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 72 bp | GGTATTCATGTGTTCTCATTGTTCAACTCCCACTTATaGGTGAGAACATGTGGTGTTTGGCATTCTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GIHVFSLFNSHL*VRTCGVWHSVP Trigger: AGGAACAGAATGCCAAACACCACATGTTCTCACTCATAAGTGGGAGTTGAACAATGAGAACACATGAATACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS CCA 72 bp | CTCATTGTTCAACTCCCACTTATGAGTGAGAACATGTaGTGTTTGGCATTCTGTTCCTGTATTAGTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LIVQLPLMSENM*CLAFCSCISLQ Trigger: CTGCAAACTAATACAGGAACAGAATGCCAAACACCACATGTTCTCACTCATAAGTGGGAGTTGAACAATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS CAA 72 bp | GTTCAACTCCCACTTATGAGTGAGAACATGTGGTGTTaGGCATTCTGTTCCTGTATTAGTTTGCAGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: VQLPLMSENMWC*AFCSCISLQRM Trigger: CATTCTCTGCAAACTAATACAGGAACAGAATGCCAAACACCACATGTTCTCACTCATAAGTGGGAGTTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS CAA 90 bp | GTTCTCATTGTTCAACTCCCACTTATGAGTGAGAACATGTGGTGTTaGGCATTCTGTTCCTGTATTAGTTTGCAGAGAATGATGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VLIVQLPLMSENMWC*AFCSCISLQRMMVS Trigger: GGAAACCATCATTCTCTGCAAACTAATACAGGAACAGAATGCCAAACACCACATGTTCTCACTCATAAGTGGGAGTTGAACAATGAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS TCA 72 bp | TTCATGTGTTCTCATTGTTCAACTCCCACTTATGAGTaGGAACATGTGGTGTTTGGCATTCTGTTCCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: FMCSHCSTPTYE*EHVVFGILFLY Trigger: ATACAGGAACAGAATGCCAAACACCACATGTTCTCACTCATAAGTGGGAGTTGAACAATGAGAACACATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS GCA 72 bp | TTTGCATTGGTTCCAAGTCTTTGCTATTGTGAACAGTaGTGCAATCAACATACAGGTGGATGTGTCTCTATA | + |
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Preference number: 6 (lower is better) Translates to: FALVPSLCYCEQ*CNQHTGGCVSI Trigger: TATAGAGACACATCCACCTGTATGTTGATTGCAGCACTGTTCACAATAGCAAAGACTTGGAACCAATGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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| CDS CAA 72 bp | AACATGTGGTGTTTGGCATTCTGTTCCTGTATTAGTTaGCAGAGAATGATGGTTTCCAGCTTCATCCATATC | + |
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Preference number: 6 (lower is better) Translates to: NMWCLAFCSCIS*QRMMVSSFIHI Trigger: GATATGGATGAAGCTGGAAACCATCATTCTCTGCAAACTAATACAGGAACAGAATGCCAAACACCACATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670219.1 ENST00000671681.1 |
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