Pregenerated sensors for LINC02266 (Homo sapiens)
Ensembl gene IDs: ENSG00000272727Ensembl transcript IDs: ENST00000610239.2, ENST00000654926.1, ENST00000659559.1, ENST00000659879.1, ENST00000660722.1, ENST00000664112.1, ENST00000667468.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATTCACTTTCAGTCAGGCTCTTCATGGGTCAGGACTGCAGGCAGCTaGCTGGGCTTCCTCACTTGCCTGTTGGCAGGAAGCCTTAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: IHFQSGSSWVRTAGS*LGFLTCLLAGSLSS Trigger: AGAGCTAAGGCTTCCTGCCAACAGGCAAGTGAGGAAGCCCAGTCAGCTGCCTGCAGTCCTGACCCATGAAGAGCCTGACTGAAAGTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS GCA 90 bp | TCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTGGAACTGCTaGAGCCATCGTGCAACCATCAGGAGAGCCAATCTTCAGGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: SIWDLFVSRWDIWNC*SHRATIRRANLQGC Trigger: ACAACCCTGAAGATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664112.1 |
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| CDS GCA 90 bp | TCTTCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTGGAACTaGTGCAGCCATCGTGCAACCATCAGGAGAGCCAATCTTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: SSIWDLFVSRWDIWN*CSHRATIRRANLQG Trigger: ACCCTGAAGATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664112.1 |
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| CDS GCA 90 bp | TCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTGGAACTGCTaGAGCCATCGTGCAACCATCAGGAGAGCCAATGGTCACAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SIWDLFVSRWDIWNC*SHRATIRRANGHSS Trigger: AGAACTGTGACCATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667468.1 |
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| CDS GCA 90 bp | TCTTCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTGGAACTaGTGCAGCCATCGTGCAACCATCAGGAGAGCCAATGGTCACAGT | + |
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Preference number: 5 (lower is better) Translates to: SSIWDLFVSRWDIWN*CSHRATIRRANGHS Trigger: ACTGTGACCATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667468.1 |
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| CDS CCA 90 bp | ACTGTCTCAGAGTTTTTGTGGGCAGGAATTCAGGATGGGCCTTGCTaGGTTGTCCTAGCTCAGGGTTGCTCATTCACTTTCAGTCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TVSEFLWAGIQDGPC*VVLAQGCSFTFSQA Trigger: AGCCTGACTGAAAGTGAATGAGCAACCCTGAGCTAGGACAACCCAGCAAGGCCCATCCTGAATTCCTGCCCACAAAAACTCTGAGACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS CCA 90 bp | ATGGCATCTTCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTaGAACTGCTGCAGCCATCGTGCAACCATCAGGAGAGCCAATGGT | + |
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Preference number: 5 (lower is better) Translates to: MASSIWDLFVSRWDI*NCCSHRATIRRANG Trigger: ACCATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGAAGATGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667468.1 |
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| CDS GCA 90 bp | TCTTTTTGTGTCTCGATGGGACATCTGGAACTGCTGCAGCCATCGTaGAACCATCAGGAGAGCCAATGGTCACAGTTCTTTCTGGACAAC | + |
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Preference number: 5 (lower is better) Translates to: SFCVSMGHLELLQPS*NHQESQWSQFFLDN Trigger: GTTGTCCAGAAAGAACTGTGACCATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667468.1 |
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| CDS CCA 90 bp | ATGGCATCTTCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTaGAACTGCTGCAGCCATCGTGCAACCATCAGGAGAGCCAATCTT | + |
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Preference number: 5 (lower is better) Translates to: MASSIWDLFVSRWDI*NCCSHRATIRRANL Trigger: AAGATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGAAGATGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000654926.1 ENST00000659559.1 ENST00000664112.1 |
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| CDS GCA 90 bp | TTTACTGTCTCAGAGTTTTTGTGGGCAGGAATTCAGGATGGGCCTTaGTGGGTTGTCCTAGCTCAGGGTTGCTCATTCACTTTCAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: FTVSEFLWAGIQDGP*WVVLAQGCSFTFSQ Trigger: CTGACTGAAAGTGAATGAGCAACCCTGAGCTAGGACAACCCAGCAAGGCCCATCCTGAATTCCTGCCCACAAAAACTCTGAGACAGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS GCA 90 bp | TCTTCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTGGAACTaGTGCAGCCATCGTGCAACCATCAGGAGAGCCAATCTTCATAAG | + |
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Preference number: 5 (lower is better) Translates to: SSIWDLFVSRWDIWN*CSHRATIRRANLHK Trigger: CTTATGAAGATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659559.1 |
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| CDS CCA 90 bp | ATGGCATCTTCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTaGAACTGCTGCAGCCATCGTGCAACCATCAGGAGAGCCAATAAT | + |
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Preference number: 5 (lower is better) Translates to: MASSIWDLFVSRWDI*NCCSHRATIRRANN Trigger: ATTATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGAAGATGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000610239.2 ENST00000659879.1 ENST00000660722.1 |
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| CDS GCA 90 bp | TCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTGGAACTGCTaGAGCCATCGTGCAACCATCAGGAGAGCCAATAATTCAATCAGA | + |
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Preference number: 5 (lower is better) Translates to: SIWDLFVSRWDIWNC*SHRATIRRANNSIR Trigger: TCTGATTGAATTATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000610239.2 ENST00000659879.1 ENST00000660722.1 |
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| CDS GCA 90 bp | TCTTCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTGGAACTaGTGCAGCCATCGTGCAACCATCAGGAGAGCCAATAATTCAATC | + |
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Preference number: 5 (lower is better) Translates to: SSIWDLFVSRWDIWN*CSHRATIRRANNSI Trigger: GATTGAATTATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000610239.2 ENST00000659879.1 ENST00000660722.1 |
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| CDS GCA 90 bp | TCCATCTGGGATCTTTTTGTGTCTCGATGGGACATCTGGAACTGCTaGAGCCATCGTGCAACCATCAGGAGAGCCAATCTTCATAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: SIWDLFVSRWDIWNC*SHRATIRRANLHKF Trigger: AAACTTATGAAGATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659559.1 |
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| CDS CCA 90 bp | ACGAACATTTACTGTCTCAGAGTTTTTGTGGGCAGGAATTCAGGATaGGCCTTGCTGGGTTGTCCTAGCTCAGGGTTGCTCATTCACTTT | + |
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Preference number: 5 (lower is better) Translates to: TNIYCLRVFVGRNSG*ALLGCPSSGLLIHF Trigger: AAAGTGAATGAGCAACCCTGAGCTAGGACAACCCAGCAAGGCCCATCCTGAATTCCTGCCCACAAAAACTCTGAGACAGTAAATGTTCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS TCA 72 bp | CAGTCAGGCTCTTCATGGGTCAGGACTGCAGGCAGCTaGCTGGGCTTCCTCACTTGCCTGTTGGCAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: QSGSSWVRTAGS*LGFLTCLLAGS Trigger: GCTTCCTGCCAACAGGCAAGTGAGGAAGCCCAGTCAGCTGCCTGCAGTCCTGACCCATGAAGAGCCTGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS CCA 72 bp | CAGGCTCTTCATGGGTCAGGACTGCAGGCAGCTGACTaGGCTTCCTCACTTGCCTGTTGGCAGGAAGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: QALHGSGLQAAD*ASSLACWQEAL Trigger: TAAGGCTTCCTGCCAACAGGCAAGTGAGGAAGCCCAGTCAGCTGCCTGCAGTCCTGACCCATGAAGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS CAA 90 bp | GGCAGGAATTCAGGATGGGCCTTGCTGGGTTGTCCTAGCTCAGGGTaGCTCATTCACTTTCAGTCAGGCTCTTCATGGGTCAGGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: GRNSGWALLGCPSSG*LIHFQSGSSWVRTA Trigger: TGCAGTCCTGACCCATGAAGAGCCTGACTGAAAGTGAATGAGCAACCCTGAGCTAGGACAACCCAGCAAGGCCCATCCTGAATTCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS GCA 72 bp | GTCTCGATGGGACATCTGGAACTGCTGCAGCCATCGTaGAACCATCAGGAGAGCCAATCTTTAGGAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VSMGHLELLQPS*NHQESQSLGAP Trigger: TGGAGCTCCTAAAGATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654926.1 |
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| CDS CAA 72 bp | TCAGGATGGGCCTTGCTGGGTTGTCCTAGCTCAGGGTaGCTCATTCACTTTCAGTCAGGCTCTTCATGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SGWALLGCPSSG*LIHFQSGSSWV Trigger: GACCCATGAAGAGCCTGACTGAAAGTGAATGAGCAACCCTGAGCTAGGACAACCCAGCAAGGCCCATCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS GCA 72 bp | GTCTCGATGGGACATCTGGAACTGCTGCAGCCATCGTaGAACCATCAGGAGAGCCAATGGTCACAGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VSMGHLELLQPS*NHQESQWSQFF Trigger: AAAGAACTGTGACCATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667468.1 |
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| CDS CCA 72 bp | CTCTCGCCACGTGGGCCTTTCCATTGGCTGTTTGAGTaGCATGGCACTCTTAAAAAGAGGCACATAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LSPRGPFHWLFE*HGTLKKRHIGG Trigger: TCCTCCTATGTGCCTCTTTTTAAGAGTGCCATGCCACTCAAACAGCCAATGGAAAGGCCCACGTGGCGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610239.2 |
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| CDS CCA 72 bp | TACTGTCTCAGAGTTTTTGTGGGCAGGAATTCAGGATaGGCCTTGCTGGGTTGTCCTAGCTCAGGGTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: YCLRVFVGRNSG*ALLGCPSSGLL Trigger: GAGCAACCCTGAGCTAGGACAACCCAGCAAGGCCCATCCTGAATTCCTGCCCACAAAAACTCTGAGACAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS CAA 72 bp | CTCAGAGTTTTTGTGGGCAGGAATTCAGGATGGGCCTaGCTGGGTTGTCCTAGCTCAGGGTTGCTCATTCAC | + |
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Preference number: 6 (lower is better) Translates to: LRVFVGRNSGWA*LGCPSSGLLIH Trigger: GTGAATGAGCAACCCTGAGCTAGGACAACCCAGCAAGGCCCATCCTGAATTCCTGCCCACAAAAACTCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS GCA 72 bp | TGGGATCTTTTTGTGTCTCGATGGGACATCTGGAACTaGTGCAGCCATCGTGCAACCATCAGGAGAGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: WDLFVSRWDIWN*CSHRATIRRAN Trigger: ATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS GCA 72 bp | TCAGAGTTTTTGTGGGCAGGAATTCAGGATGGGCCTTaGTGGGTTGTCCTAGCTCAGGGTTGCTCATTCACT | + |
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Preference number: 6 (lower is better) Translates to: SEFLWAGIQDGP*WVVLAQGCSFT Trigger: AGTGAATGAGCAACCCTGAGCTAGGACAACCCAGCAAGGCCCATCCTGAATTCCTGCCCACAAAAACTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS GCA 72 bp | GATCTTTTTGTGTCTCGATGGGACATCTGGAACTGCTaGAGCCATCGTGCAACCATCAGGAGAGCCAATGGT | + |
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Preference number: 6 (lower is better) Translates to: DLFVSRWDIWNC*SHRATIRRANG Trigger: ACCATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667468.1 |
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| CDS CCA 72 bp | GAGTTTTTGTGGGCAGGAATTCAGGATGGGCCTTGCTaGGTTGTCCTAGCTCAGGGTTGCTCATTCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: EFLWAGIQDGPC*VVLAQGCSFTF Trigger: GAAAGTGAATGAGCAACCCTGAGCTAGGACAACCCAGCAAGGCCCATCCTGAATTCCTGCCCACAAAAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS CAA 72 bp | CATAGGAGGAGATGGCATCTTCCATCTGGGATCTTTTaGTGTCTCGATGGGACATCTGGAACTGCTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: HRRRWHLPSGIF*CLDGTSGTAAA Trigger: GGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATCCCAGATGGAAGATGCCATCTCCTCCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS GCA 72 bp | GATCTTTTTGTGTCTCGATGGGACATCTGGAACTGCTaGAGCCATCGTGCAACCATCAGGAGAGCCAATCTT | + |
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Preference number: 6 (lower is better) Translates to: DLFVSRWDIWNC*SHRATIRRANL Trigger: AAGATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000654926.1 ENST00000659559.1 ENST00000664112.1 |
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| CDS GCA 72 bp | GATCTTTTTGTGTCTCGATGGGACATCTGGAACTGCTaGAGCCATCGTGCAACCATCAGGAGAGCCAATAAT | + |
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Preference number: 6 (lower is better) Translates to: DLFVSRWDIWNC*SHRATIRRANN Trigger: ATTATTGGCTCTCCTGATGGTTGCACGATGGCTGCAGCAGTTCCAGATGTCCCATCGAGACACAAAAAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000610239.2 ENST00000659879.1 ENST00000660722.1 |
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| CDS CAA 90 bp | ATTTACTGTCTCAGAGTTTTTGTGGGCAGGAATTCAGGATGGGCCTaGCTGGGTTGTCCTAGCTCAGGGTTGCTCATTCACTTTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: IYCLRVFVGRNSGWA*LGCPSSGLLIHFQS Trigger: TGACTGAAAGTGAATGAGCAACCCTGAGCTAGGACAACCCAGCAAGGCCCATCCTGAATTCCTGCCCACAAAAACTCTGAGACAGTAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS CCA 72 bp | GCAACCATCAGGAGAGCCAATGGTCACAGTTCTTTCTaGACAACTTCTGGTAGTGATGCATCTCATAAGATT | + |
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Preference number: 6 (lower is better) Translates to: ATIRRANGHSSF*TTSGSDASHKI Trigger: AATCTTATGAGATGCATCACTACCAGAAGTTGTCCAGAAAGAACTGTGACCATTGGCTCTCCTGATGGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667468.1 |
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| CDS CAA 72 bp | GGTTTAAAACAACGAACATTTACTGTCTCAGAGTTTTaGTGGGCAGGAATTCAGGATGGGCCTTGCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GLKQRTFTVSEF*WAGIQDGPCWV Trigger: AACCCAGCAAGGCCCATCCTGAATTCCTGCCCACAAAAACTCTGAGACAGTAAATGTTCGTTGTTTTAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS CAA 90 bp | AAACTTTGTGGTTTAAAACAACGAACATTTACTGTCTCAGAGTTTTaGTGGGCAGGAATTCAGGATGGGCCTTGCTGGGTTGTCCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: KLCGLKQRTFTVSEF*WAGIQDGPCWVVLA Trigger: AGCTAGGACAACCCAGCAAGGCCCATCCTGAATTCCTGCCCACAAAAACTCTGAGACAGTAAATGTTCGTTGTTTTAAACCACAAAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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| CDS TCA 72 bp | ACAATTTCCATATACAGAATGACTATTCAAGTTCCCTaGAGGAATACTGCAGTCCCAATTGGTTACCTAATT | + |
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Preference number: 6 (lower is better) Translates to: TISIYRMTIQVP*RNTAVPIGYLI Trigger: AATTAGGTAACCAATTGGGACTGCAGTATTCCTTCAGGGAACTTGAATAGTCATTCTGTATATGGAAATTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000610239.2 ENST00000654926.1 ENST00000659559.1 ENST00000659879.1 ENST00000660722.1 ENST00000664112.1 ENST00000667468.1 |
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