Pregenerated sensors for LINC02265 (Homo sapiens)
Ensembl gene IDs: ENSG00000249241Ensembl transcript IDs: ENST00000510551.1
Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | AGGACCAGCTCATCCAAGAATCAGCTGGAAGTCCAGACCAAGGTGTaGGCAGGGCTGGTTTCCCCCAAGGCCTTTCTTCTTGGCTTGCAG | + |
Preference number: 5 (lower is better) Translates to: RTSSSKNQLEVQTKV*AGLVSPKAFLLGLQ Trigger: CTGCAAGCCAAGAAGAAAGGCCTTGGGGGAAACCAGCCCTGCCCACACCTTGGTCTGGACTTCCAGCTGATTCTTGGATGAGCTGGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510551.1 |
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CDS CCA 90 bp | TACAATCCGTCTTGTAAAGCCTTGCAACGGCCTCAATTACAGCCCTaGATTCTCAGCAGAGGCACAGAGTGGGGGTTTTTGCTTGATTCT | + |
Preference number: 5 (lower is better) Translates to: YNPSCKALQRPQLQP*ILSRGTEWGFLLDS Trigger: AGAATCAAGCAAAAACCCCCACTCTGTGCCTCTGCTGAGAATCCAGGGCTGTAATTGAGGCCGTTGCAAGGCTTTACAAGACGGATTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000510551.1 |
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CDS CCA 72 bp | TCTTGTAAAGCCTTGCAACGGCCTCAATTACAGCCCTaGATTCTCAGCAGAGGCACAGAGTGGGGGTTTTTG | + |
Preference number: 6 (lower is better) Translates to: SCKALQRPQLQP*ILSRGTEWGFL Trigger: CAAAAACCCCCACTCTGTGCCTCTGCTGAGAATCCAGGGCTGTAATTGAGGCCGTTGCAAGGCTTTACAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000510551.1 |
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CDS CAA 72 bp | GCCTTTCTTCTTGGCTTGCAGATGGCTGTCTTCTCTTaGTGTCCTTACAGGGTCTCCTCTGTGCATGTCTGG | + |
Preference number: 6 (lower is better) Translates to: AFLLGLQMAVFS*CPYRVSSVHVW Trigger: CCAGACATGCACAGAGGAGACCCTGTAAGGACACAAAGAGAAGACAGCCATCTGCAAGCCAAGAAGAAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510551.1 |
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CDS CAA 90 bp | AGGCAATCTTTTCACATCCTGAGCTACAATCCGTCTTGTAAAGCCTaGCAACGGCCTCAATTACAGCCCTGGATTCTCAGCAGAGGCACA | + |
Preference number: 6 (lower is better) Translates to: RQSFHILSYNPSCKA*QRPQLQPWILSRGT Trigger: TGTGCCTCTGCTGAGAATCCAGGGCTGTAATTGAGGCCGTTGCAAGGCTTTACAAGACGGATTGTAGCTCAGGATGTGAAAAGATTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510551.1 |
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CDS CAA 72 bp | TTTCACATCCTGAGCTACAATCCGTCTTGTAAAGCCTaGCAACGGCCTCAATTACAGCCCTGGATTCTCAGC | + |
Preference number: 6 (lower is better) Translates to: FHILSYNPSCKA*QRPQLQPWILS Trigger: GCTGAGAATCCAGGGCTGTAATTGAGGCCGTTGCAAGGCTTTACAAGACGGATTGTAGCTCAGGATGTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510551.1 |
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CDS CAA 72 bp | TGGCAAAGCTTATTTTTCCTTAGCAGGAGTCTGCTTTaGCAAAGGTTCGTCTCTTACATTTTCTTTCAGACA | + |
Preference number: 6 (lower is better) Translates to: WQSLFFLSRSLL*QRFVSYIFFQT Trigger: TGTCTGAAAGAAAATGTAAGAGACGAACCTTTGCAAAAGCAGACTCCTGCTAAGGAAAAATAAGCTTTGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510551.1 |