Pregenerated sensors for LINC02263 (Homo sapiens)
Ensembl gene IDs: ENSG00000228358Ensembl transcript IDs: ENST00000419264.2, ENST00000420701.6, ENST00000426240.5, ENST00000448804.6, ENST00000654527.1, ENST00000654670.1, ENST00000655627.1, ENST00000655906.1, ENST00000656442.1, ENST00000656637.1, ENST00000658771.1, ENST00000659910.1, ENST00000662639.1, ENST00000666918.1, ENST00000667220.1, ENST00000668339.1, ENST00000668361.1, ENST00000668756.1, ENST00000669946.1, ENST00000670348.1, ENST00000670630.1, ENST00000671671.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TACAAATGTGGTTCTACTGAGGAGGCTGAGGGCAGGAGAATGGCGTaGACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: YKCGSTEEAEGRRMA*TREAELAVSRDHAA Trigger: TGCGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCCTCAGCCTCCTCAGTAGAACCACATTTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670348.1 |
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| CDS GCA 90 bp | GAGAGAGGGAAGTATGCATCTAATGTATCCAGGCTTTTCATAGTCTaGCCGAGGGAGGGACTGGCTTCTGTCTTGCCTCATCTGGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: ERGKYASNVSRLFIV*PREGLASVLPHLEC Trigger: GCACTCCAGATGAGGCAAGACAGAAGCCAGTCCCTCCCTCGGGCAGACTATGAAAAGCCTGGATACATTAGATGCATACTTCCCTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667220.1 ENST00000670348.1 |
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| CDS TCA 90 bp | AACATACCAGAGCAGCAATGTCCAAAGAACCCCGTGCCTGAGTCATaGCCCAAGCATATCTTTCTGCAGAATCCGTATAGAAGGGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: NIPEQQCPKNPVPES*PKHIFLQNPYRRVH Trigger: ATGCACCCTTCTATACGGATTCTGCAGAAAGATATGCTTGGGTCATGACTCAGGCACGGGGTTCTTTGGACATTGCTGCTCTGGTATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669946.1 |
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| CDS GCA 90 bp | ATTGAAGCTCCTAGGAGACTCCTGGCTGCCAGTAGCAAAGTTGACTaGCTCACGAGGAGTTTTGTAAGTAAGAATTCTAGAAGGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: IEAPRRLLAASSKVD*LTRSFVSKNSRRVQ Trigger: CTGCACCCTTCTAGAATTCTTACTTACAAAACTCCTCGTGAGGCAGTCAACTTTGCTACTGGCAGCCAGGAGTCTCCTAGGAGCTTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654527.1 ENST00000656442.1 |
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| CDS TCA 90 bp | GGTTGGCAAGTCCAAAATAAAGCCACTGGCAGATTTGGTATTTGGTaGGGGATCACTCCTCATAGACAGTGCTTTCCCACAATGACCTCA | + |
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Preference number: 5 (lower is better) Translates to: GWQVQNKATGRFGIW*GITPHRQCFPTMTS Trigger: TGAGGTCATTGTGGGAAAGCACTGTCTATGAGGAGTGATCCCTCACCAAATACCAAATCTGCCAGTGGCTTTATTTTGGACTTGCCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS GCA 90 bp | GTCCAAAGAACCCCGTGCCTGAGTCATGACCCAAGCATATCTTTCTaGAGAATCCGTATAGAAGGGTGCATATATTCGCACTTTGACTCT | + |
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Preference number: 5 (lower is better) Translates to: VQRTPCLSHDPSISF*RIRIEGCIYSHFDS Trigger: AGAGTCAAAGTGCGAATATATGCACCCTTCTATACGGATTCTGCAGAAAGATATGCTTGGGTCATGACTCAGGCACGGGGTTCTTTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669946.1 |
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| CDS CCA 90 bp | CAGAGAAGACAGACAGAGAAGCAAGCTAGTCTGCAGGTGAGATCCTaGGCTAAATTACAAGCAGGACTCCTAGTTAAATTTGGATTTCAG | + |
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Preference number: 5 (lower is better) Translates to: QRRQTEKQASLQVRS*AKLQAGLLVKFGFQ Trigger: CTGAAATCCAAATTTAACTAGGAGTCCTGCTTGTAATTTAGCCCAGGATCTCACCTGCAGACTAGCTTGCTTCTCTGTCTGTCTTCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS TCA 90 bp | GCTGATTATGAGAAAGGAATGACAAATGATCTTGGCCTGGAGAGGTaGGTAGGAGTTTGCAAGAAAAATGAGGGATTGGAGGTTACTGTA | + |
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Preference number: 5 (lower is better) Translates to: ADYEKGMTNDLGLER*VGVCKKNEGLEVTV Trigger: TACAGTAACCTCCAATCCCTCATTTTTCTTGCAAACTCCTACTCACCTCTCCAGGCCAAGATCATTTGTCATTCCTTTCTCATAATCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669946.1 |
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| CDS GCA 90 bp | AGTCATGACCCAAGCATATCTTTCTGCAGAATCCGTATAGAAGGGTaGATATATTCGCACTTTGACTCTTCTATCCATGAGTATCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SHDPSISFCRIRIEG*IYSHFDSSIHEYQP Trigger: AGGCTGATACTCATGGATAGAAGAGTCAAAGTGCGAATATATGCACCCTTCTATACGGATTCTGCAGAAAGATATGCTTGGGTCATGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000419264.2 ENST00000420701.6 ENST00000426240.5 ENST00000448804.6 ENST00000654527.1 ENST00000654670.1 ENST00000655906.1 ENST00000656442.1 ENST00000656637.1 ENST00000658771.1 ENST00000659910.1 ENST00000662639.1 ENST00000666918.1 ENST00000667220.1 ENST00000668339.1 ENST00000668361.1 ENST00000668756.1 ENST00000669946.1 ENST00000670348.1 ENST00000671671.1 |
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| CDS GCA 90 bp | CATTTACCATTTCTCAACCTTTCTAACTATTTCTGTGAGTGTGAGTaGGTGTGTGTGTGTGCGTGCCTATGTGTCTTCATTTCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: HLPFLNLSNYFCECE*VCVCACLCVFISLS Trigger: AGAGAGAGAAATGAAGACACATAGGCACGCACACACACACACGCACTCACACTCACAGAAATAGTTAGAAAGGTTGAGAAATGGTAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669946.1 |
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| CDS TCA 90 bp | AAAACTCAGCTTCCAGTGAAATCATCTTGTCTTGTAACATCTCCCTaGAGGAAAAAGAGAGAGGGAAGTATGCATCTAATGTATCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: KTQLPVKSSCLVTSP*RKKREGSMHLMYPG Trigger: GCCTGGATACATTAGATGCATACTTCCCTCTCTCTTTTTCCTTCAGGGAGATGTTACAAGACAAGATGATTTCACTGGAAGCTGAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000656637.1 ENST00000658771.1 ENST00000667220.1 ENST00000670348.1 |
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| CDS GCA 90 bp | AAGAGGAAGAAATATACCCTGAGTCATGACCCAAGCATATCTTTCTaGAGAATCCGTATAGAAGGGTGCATATATTCGCACTTTGACTCT | + |
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Preference number: 5 (lower is better) Translates to: KRKKYTLSHDPSISF*RIRIEGCIYSHFDS Trigger: AGAGTCAAAGTGCGAATATATGCACCCTTCTATACGGATTCTGCAGAAAGATATGCTTGGGTCATGACTCAGGGTATATTTCTTCCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654670.1 ENST00000656442.1 ENST00000656637.1 ENST00000667220.1 ENST00000668756.1 |
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| CDS TCA 90 bp | ATGCTTTACCAAAGACAAAGTTTCATAGGAAATTCACCTGAGTCATaGCCCAAGCATATCTTTCTGCAGAATCCGTATAGAAGGGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: MLYQRQSFIGNSPES*PKHIFLQNPYRRVH Trigger: ATGCACCCTTCTATACGGATTCTGCAGAAAGATATGCTTGGGTCATGACTCAGGTGAATTTCCTATGAAACTTTGTCTTTGGTAAAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000420701.6 ENST00000448804.6 ENST00000654527.1 ENST00000658771.1 ENST00000659910.1 ENST00000668339.1 ENST00000668361.1 ENST00000670348.1 ENST00000671671.1 |
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| CDS GCA 90 bp | TCTGTGGCTATTCTACAAAATGATCCAGTCAATGGGGATACTTTCTaGCAATTATATTGGTCACTATGGAAGAAGGATGTCTTAGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SVAILQNDPVNGDTF*QLYWSLWKKDVLVH Trigger: ATGGACTAAGACATCCTTCTTCCATAGTGACCAATATAATTGGCAGAAAGTATCCCCATTGACTGGATCATTTTGTAGAATAGCCACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS TCA 90 bp | TTAAGGGAACTAGCTCTATCTTTCTTGCTGTTAAATGTACACATATaGGTGAATTCCACATCCAGACAATGGAATGCAGGTAGAAGTAAT | + |
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Preference number: 5 (lower is better) Translates to: LRELALSFLLLNVHI*VNSTSRQWNAGRSN Trigger: ATTACTTCTACCTGCATTCCATTGTCTGGATGTGGAATTCACTCATATGTGTACATTTAACAGCAAGAAAGATAGAGCTAGTTCCCTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655906.1 |
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| CDS CCA 90 bp | TCTTTACTAGCAAGGCCACTCCCAAACTTACCATATATATATATATaGAACAGCCAAGAATGGGATGCTTTACCAAAGACAAAGTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SLLARPLPNLPYIYI*NSQEWDALPKTKFH Trigger: ATGAAACTTTGTCTTTGGTAAAGCATCCCATTCTTGGCTGTTCCATATATATATATATGGTAAGTTTGGGAGTGGCCTTGCTAGTAAAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000420701.6 ENST00000448804.6 ENST00000654527.1 ENST00000668339.1 ENST00000668361.1 |
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| CDS GCA 90 bp | GTGCGCATATGTATTGTGTGTTTATTCAGTAAGGTCAGAATATTCTaGAACAACCCATTAATAGTTTGTATTCATTTCCACTCTCCTAAC | + |
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Preference number: 5 (lower is better) Translates to: VRICIVCLFSKVRIF*NNPLIVCIHFHSPN Trigger: GTTAGGAGAGTGGAAATGAATACAAACTATTAATGGGTTGTTGCAGAATATTCTGACCTTACTGAATAAACACACAATACATATGCGCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000659910.1 ENST00000667220.1 ENST00000668756.1 ENST00000670348.1 ENST00000670630.1 ENST00000671671.1 |
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| CDS GCA 72 bp | GGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTaGAGTGAGCCGAGATCACGCCGCAGCACTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GQENGVNPGGGA*SEPRSRRSTPA Trigger: GGCTGGAGTGCTGCGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670348.1 |
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| CDS TCA 72 bp | AGAGACTTATTGCTGGTGGGTATTCTTGAAGAGTCCTaGGGTGGCACCAGGGCATCACGTGGTGGAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: RDLLLVGILEES*GGTRASRGGKC Trigger: GCACTTTCCACCACGTGATGCCCTGGTGCCACCTCAGGACTCTTCAAGAATACCCACCAGCAATAAGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS GCA 72 bp | AAAGGAGTGGGTGGCTTACTGCATCCAACATGGCTGTaGAAGAAAGCGGAGAAGGTGCAGAACCTGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: KGVGGLLHPTWL*KKAEKVQNLRL Trigger: AAGCCTCAGGTTCTGCACCTTCTCCGCTTTCTTGCACAGCCATGTTGGATGCAGTAAGCCACCCACTCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667220.1 |
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| CDS TCA 72 bp | GCCTGGGCTCTTATCTGGAGTCCTGGGAATGTCAGATaGCCATCAGGTGATGGTCAGGCAGTTGTTAAACTG | + |
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Preference number: 6 (lower is better) Translates to: AWALIWSPGNVR*PSGDGQAVVKL Trigger: CAGTTTAACAACTGCCTGACCATCACCTGATGGTCATCTGACATTCCCAGGACTCCAGATAAGAGCCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654527.1 ENST00000654670.1 ENST00000655906.1 ENST00000656442.1 ENST00000666918.1 ENST00000668339.1 |
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| CDS CCA 72 bp | GGATGTATTGAGCTATTGAAGCTCCTAGGAGACTCCTaGCTGCCAGTAGCAAAGTTGACTGCCTCACGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GCIELLKLLGDS*LPVAKLTASRG Trigger: TCCTCGTGAGGCAGTCAACTTTGCTACTGGCAGCCAGGAGTCTCCTAGGAGCTTCAATAGCTCAATACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654527.1 ENST00000656442.1 |
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| CDS CAA 72 bp | ACTCCAGGTCTGACAAGGTCAAAATCAAGGTGTCCTTaGGCCTGGGCTCTTATCTGGAGTCCTGGGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: TPGLTRSKSRCP*AWALIWSPGNV Trigger: GACATTCCCAGGACTCCAGATAAGAGCCCAGGCCAAAGGACACCTTGATTTTGACCTTGTCAGACCTGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000654527.1 ENST00000654670.1 ENST00000655906.1 ENST00000656442.1 ENST00000666918.1 ENST00000668339.1 |
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| CDS TCA 72 bp | GATCAGCAGCTTCCTGATAAGATCTCAGGAGTCGGATaGGAGGGCTCACACATGCGCACTAAGAGGCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: DQQLPDKISGVG*EGSHMRTKRQN Trigger: ATTTTGCCTCTTAGTGCGCATGTGTGAGCCCTCTCATCCGACTCCTGAGATCTTATCAGGAAGCTGCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654670.1 ENST00000668339.1 |
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| CDS TCA 72 bp | CATACCAGAGCAGCAATGTCCAAAGAACCCCGTGCCTaGGTCATGACCCAAGCATATCTTTCTGCAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: HTRAAMSKEPRA*VMTQAYLSAES Trigger: GGATTCTGCAGAAAGATATGCTTGGGTCATGACTCAGGCACGGGGTTCTTTGGACATTGCTGCTCTGGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669946.1 |
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| CDS CAA 72 bp | GGTCAAAATCAAGGTGTCCTTTGGCCTGGGCTCTTATaGGGAATGTCAGATGACCATCAGGTGATGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GQNQGVLWPGLL*GMSDDHQVMVR Trigger: CCTGACCATCACCTGATGGTCATCTGACATTCCCAATAAGAGCCCAGGCCAAAGGACACCTTGATTTTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420701.6 ENST00000426240.5 |
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| CDS TCA 72 bp | TGTCCTTTGGCCTGGGCTCTTATTGGGAATGTCAGATaGCCATCAGGTGATGGTCAGGCAGTTGTTAAACTG | + |
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Preference number: 6 (lower is better) Translates to: CPLAWALIGNVR*PSGDGQAVVKL Trigger: CAGTTTAACAACTGCCTGACCATCACCTGATGGTCATCTGACATTCCCAATAAGAGCCCAGGCCAAAGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420701.6 ENST00000426240.5 |
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| CDS TCA 72 bp | GAGCAGCAATGTCCAAAGAACCCCGTGCCTGAGTCATaGCCCAAGCATATCTTTCTGCAGAATCCGTATAGA | + |
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Preference number: 6 (lower is better) Translates to: EQQCPKNPVPES*PKHIFLQNPYR Trigger: TCTATACGGATTCTGCAGAAAGATATGCTTGGGTCATGACTCAGGCACGGGGTTCTTTGGACATTGCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669946.1 |
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| CDS GCA 72 bp | AAGTATGCATCTAATGTATCCAGGCTTTTCATAGTCTaGCCGAGGGAGGGACTGGCTTCTGTCTTGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: KYASNVSRLFIV*PREGLASVLPH Trigger: ATGAGGCAAGACAGAAGCCAGTCCCTCCCTCGGGCAGACTATGAAAAGCCTGGATACATTAGATGCATACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667220.1 ENST00000670348.1 |
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| CDS GCA 72 bp | ACCCCGTGCCTGAGTCATGACCCAAGCATATCTTTCTaGAGAATCCGTATAGAAGGGTGCATATATTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: TPCLSHDPSISF*RIRIEGCIYSH Trigger: GTGCGAATATATGCACCCTTCTATACGGATTCTGCAGAAAGATATGCTTGGGTCATGACTCAGGCACGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669946.1 |
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| CDS GCA 72 bp | ACAACATACCAGAGCAGCAATGTCCAAAGAACCCCGTaGCTGAGTCATGACCCAAGCATATCTTTCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TTYQSSNVQRTP*LSHDPSISFCR Trigger: TCTGCAGAAAGATATGCTTGGGTCATGACTCAGGCACGGGGTTCTTTGGACATTGCTGCTCTGGTATGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669946.1 |
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| CDS CAA 90 bp | GGAGTCCTGGGAATGTCAGATGACCATCAGGTGATGGTCAGGCAGTaGTTAAACTGTCTCTCTAAAGTAATCATTGGTTGCAGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GVLGMSDDHQVMVRQ*LNCLSKVIIGCSWC Trigger: GCACCAGCTGCAACCAATGATTACTTTAGAGAGACAGTTTAACAACTGCCTGACCATCACCTGATGGTCATCTGACATTCCCAGGACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654527.1 ENST00000654670.1 ENST00000655906.1 ENST00000656442.1 ENST00000666918.1 ENST00000668339.1 |
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| CDS CAA 90 bp | GCATTTCCCCAAAGCTGGCAAAACTCAGCTTCCAGTGAAATCATCTaGTCTTGTAACATCTCCCTCACCCTTAGTACTGATGGAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: AFPQSWQNSASSEII*SCNISLTLSTDGTG Trigger: GCCTGTTCCATCAGTACTAAGGGTGAGGGAGATGTTACAAGACAAGATGATTTCACTGGAAGCTGAGTTTTGCCAGCTTTGGGGAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659910.1 ENST00000662639.1 ENST00000668756.1 |
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| CDS GCA 72 bp | ACAGCTAGGAACAAAGAAAACAGGCAGGCATCTTGCTaGATTAGACACAACTCTGCAAGACTGGATGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: TARNKENRQASC*IRHNSARLDEG Trigger: GCCTTCATCCAGTCTTGCAGAGTTGTGTCTAATGCAGCAAGATGCCTGCCTGTTTTCTTTGTTCCTAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655627.1 ENST00000659910.1 ENST00000668756.1 |
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| CDS CAA 72 bp | TCTCCCTTTCTCTGTTTTTCTGGATGTATTGAGCTATaGAAGCTCCTAGGAGACTCCTGGCTGCCAGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: SPFLCFSGCIEL*KLLGDSWLPVA Trigger: TGCTACTGGCAGCCAGGAGTCTCCTAGGAGCTTCAATAGCTCAATACATCCAGAAAAACAGAGAAAGGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654527.1 ENST00000656442.1 |
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| CDS CAA 90 bp | GCATTTCCCCAAAGCTGGCAAAACTCAGCTTCCAGTGAAATCATCTaGTCTTGTAACATCTCCTGCATCCAACATGGCTGTGCAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: AFPQSWQNSASSEII*SCNISCIQHGCARK Trigger: CTTTCTTGCACAGCCATGTTGGATGCAGGAGATGTTACAAGACAAGATGATTTCACTGGAAGCTGAGTTTTGCCAGCTTTGGGGAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655627.1 ENST00000669946.1 ENST00000670630.1 ENST00000671671.1 |
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| CDS CAA 90 bp | GCATTTCCCCAAAGCTGGCAAAACTCAGCTTCCAGTGAAATCATCTaGTCTTGTAACATCTCCCAGTCTGAATGTTCCAAGGAGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: AFPQSWQNSASSEII*SCNISQSECSKEVM Trigger: CATGACCTCCTTGGAACATTCAGACTGGGAGATGTTACAAGACAAGATGATTTCACTGGAAGCTGAGTTTTGCCAGCTTTGGGGAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668361.1 |
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| CDS TCA 72 bp | GTCCAAAATAAAGCCACTGGCAGATTTGGTATTTGGTaGGGGATCACTCCTCATAGACAGTGCTTTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: VQNKATGRFGIW*GITPHRQCFPT Trigger: TGTGGGAAAGCACTGTCTATGAGGAGTGATCCCTCACCAAATACCAAATCTGCCAGTGGCTTTATTTTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS CAA 72 bp | GAGGTTGGCAAGTCCAAAATAAAGCCACTGGCAGATTaGGTATTTGGTGAGGGATCACTCCTCATAGACAGT | + |
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Preference number: 6 (lower is better) Translates to: EVGKSKIKPLAD*VFGEGSLLIDS Trigger: ACTGTCTATGAGGAGTGATCCCTCACCAAATACCAAATCTGCCAGTGGCTTTATTTTGGACTTGCCAACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS CAA 90 bp | CTCTTATTGGGAATGTCAGATGACCATCAGGTGATGGTCAGGCAGTaGTTAAACTGTCTCTCTAAAGTAATCATTGGTTGCAGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LLLGMSDDHQVMVRQ*LNCLSKVIIGCSWC Trigger: GCACCAGCTGCAACCAATGATTACTTTAGAGAGACAGTTTAACAACTGCCTGACCATCACCTGATGGTCATCTGACATTCCCAATAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420701.6 ENST00000426240.5 |
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| CDS TCA 72 bp | GAGAAAGGAATGACAAATGATCTTGGCCTGGAGAGGTaGGTAGGAGTTTGCAAGAAAAATGAGGGATTGGAG | + |
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Preference number: 6 (lower is better) Translates to: EKGMTNDLGLER*VGVCKKNEGLE Trigger: CTCCAATCCCTCATTTTTCTTGCAAACTCCTACTCACCTCTCCAGGCCAAGATCATTTGTCATTCCTTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669946.1 |
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| CDS CCA 72 bp | CAGACAGAGAAGCAAGCTAGTCTGCAGGTGAGATCCTaGGCTAAATTACAAGCAGGACTCCTAGTTAAATTT | + |
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Preference number: 6 (lower is better) Translates to: QTEKQASLQVRS*AKLQAGLLVKF Trigger: AAATTTAACTAGGAGTCCTGCTTGTAATTTAGCCCAGGATCTCACCTGCAGACTAGCTTGCTTCTCTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS CAA 72 bp | CAAAGCTGGCAAAACTCAGCTTCCAGTGAAATCATCTaGTCTTGTAACATCTCCTGCATCCAACATGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: QSWQNSASSEII*SCNISCIQHGC Trigger: ACAGCCATGTTGGATGCAGGAGATGTTACAAGACAAGATGATTTCACTGGAAGCTGAGTTTTGCCAGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655627.1 ENST00000669946.1 ENST00000670630.1 ENST00000671671.1 |
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| CDS TCA 72 bp | TCAAAAATACACTGGCTTCCCGTTTTCTCCTGCCAGTaGCTTTCATTGGCTGAACTCAACCAGAAGACTAAT | + |
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Preference number: 6 (lower is better) Translates to: SKIHWLPVFSCQ*LSLAELNQKTN Trigger: ATTAGTCTTCTGGTTGAGTTCAGCCAATGAAAGTCACTGGCAGGAGAAAACGGGAAGCCAGTGTATTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS GCA 72 bp | CCAAATTGTCTGAGTCATGACCCAAGCATATCTTTCTaGAGAATCCGTATAGAAGGGTGCATATATTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: PNCLSHDPSISF*RIRIEGCIYSH Trigger: GTGCGAATATATGCACCCTTCTATACGGATTCTGCAGAAAGATATGCTTGGGTCATGACTCAGACAATTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426240.5 ENST00000655906.1 ENST00000662639.1 |
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| CDS GCA 72 bp | ATCAGGAATACAGAAATAATGAAAGCTATAATGAGGTaGCCTAGAGGTGGCAACACTAGAAGCTGTTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: IRNTEIMKAIMR*PRGGNTRSCCH Trigger: GTGGCAACAGCTTCTAGTGTTGCCACCTCTAGGGCACCTCATTATAGCTTTCATTATTTCTGTATTCCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS GCA 72 bp | TTTCTCAACCTTTCTAACTATTTCTGTGAGTGTGAGTaGGTGTGTGTGTGTGCGTGCCTATGTGTCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: FLNLSNYFCECE*VCVCACLCVFI Trigger: AATGAAGACACATAGGCACGCACACACACACACGCACTCACACTCACAGAAATAGTTAGAAAGGTTGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669946.1 |
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| CDS CCA 72 bp | AGAGGAGTGAAATATGCCTTCAACATTCTGGCCATTTaGTGTGTTATCCAAGGAACTAGTTTCTCTCTCACC | + |
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Preference number: 6 (lower is better) Translates to: RGVKYAFNILAI*CVIQGTSFSLT Trigger: GGTGAGAGAGAAACTAGTTCCTTGGATAACACACCAAATGGCCAGAATGTTGAAGGCATATTTCACTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655627.1 ENST00000670630.1 |
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| CDS CCA 72 bp | GAAGAAATATACCCTGCATCAGCATTTCCCCAAAGCTaGCAAAACTCAGCTTCCAGTGAAATCATCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: EEIYPASAFPQS*QNSASSEIILS Trigger: AGACAAGATGATTTCACTGGAAGCTGAGTTTTGCCAGCTTTGGGGAAATGCTGATGCAGGGTATATTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670630.1 |
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| CDS CAA 72 bp | GGAATGTCAGATGACCATCAGGTGATGGTCAGGCAGTaGTTAAACTGTCTCTCTAAAGTAATCATTGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: GMSDDHQVMVRQ*LNCLSKVIIGC Trigger: GCAACCAATGATTACTTTAGAGAGACAGTTTAACAACTGCCTGACCATCACCTGATGGTCATCTGACATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000420701.6 ENST00000426240.5 ENST00000654527.1 ENST00000654670.1 ENST00000655906.1 ENST00000656442.1 ENST00000666918.1 ENST00000668339.1 |
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| CDS CAA 72 bp | CAAAGCTGGCAAAACTCAGCTTCCAGTGAAATCATCTaGTCTTGTAACATCTCCCTCTGCTCTTTGATTCAG | + |
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Preference number: 6 (lower is better) Translates to: QSWQNSASSEII*SCNISLCSLIQ Trigger: CTGAATCAAAGAGCAGAGGGAGATGTTACAAGACAAGATGATTTCACTGGAAGCTGAGTTTTGCCAGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654527.1 ENST00000656442.1 |
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| CDS CAA 72 bp | CAAAGCTGGCAAAACTCAGCTTCCAGTGAAATCATCTaGTCTTGTAACATCTCCCTCACCCTTAGTACTGAT | + |
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Preference number: 6 (lower is better) Translates to: QSWQNSASSEII*SCNISLTLSTD Trigger: ATCAGTACTAAGGGTGAGGGAGATGTTACAAGACAAGATGATTTCACTGGAAGCTGAGTTTTGCCAGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659910.1 ENST00000662639.1 ENST00000668756.1 |
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| CDS CAA 72 bp | CAAAGCTGGCAAAACTCAGCTTCCAGTGAAATCATCTaGTCTTGTAACATCTCCCAGTCTGAATGTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: QSWQNSASSEII*SCNISQSECSK Trigger: CTTGGAACATTCAGACTGGGAGATGTTACAAGACAAGATGATTTCACTGGAAGCTGAGTTTTGCCAGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668361.1 |
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| CDS TCA 72 bp | GGATTTCAGGTAACAACTATTGCCACTAAGAGATCATaGGTGTCAAAAATACACTGGCTTCCCGTTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GFQVTTIATKRS*VSKIHWLPVFS Trigger: GGAGAAAACGGGAAGCCAGTGTATTTTTGACACTCATGATCTCTTAGTGGCAATAGTTGTTACCTGAAATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS GCA 72 bp | CCAAGCATATCTTTCTGCAGAATCCGTATAGAAGGGTaGATATATTCGCACTTTGACTCTTCTATCCATGAG | + |
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Preference number: 6 (lower is better) Translates to: PSISFCRIRIEG*IYSHFDSSIHE Trigger: CTCATGGATAGAAGAGTCAAAGTGCGAATATATGCACCCTTCTATACGGATTCTGCAGAAAGATATGCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000419264.2 ENST00000420701.6 ENST00000426240.5 ENST00000448804.6 ENST00000654527.1 ENST00000654670.1 ENST00000655906.1 ENST00000656442.1 ENST00000656637.1 ENST00000658771.1 ENST00000659910.1 ENST00000662639.1 ENST00000666918.1 ENST00000667220.1 ENST00000668339.1 ENST00000668361.1 ENST00000668756.1 ENST00000669946.1 ENST00000670348.1 ENST00000671671.1 |
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| CDS GCA 72 bp | AAATATACCCTGAGTCATGACCCAAGCATATCTTTCTaGAGAATCCGTATAGAAGGGTGCATATATTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: KYTLSHDPSISF*RIRIEGCIYSH Trigger: GTGCGAATATATGCACCCTTCTATACGGATTCTGCAGAAAGATATGCTTGGGTCATGACTCAGGGTATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654670.1 ENST00000656442.1 ENST00000656637.1 ENST00000667220.1 ENST00000668756.1 |
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| CDS CAA 72 bp | GAAATCATCTTGTCTTGTAACATCTCCCTCTGCTCTTaGATTCAGAAACTTCCCTCTCTCTCTCTAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: EIILSCNISLCS*IQKLPSLSLTS Trigger: AGAGGTTAGAGAGAGAGAGGGAAGTTTCTGAATCAAAGAGCAGAGGGAGATGTTACAAGACAAGATGATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654527.1 ENST00000656442.1 |
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| CDS CAA 72 bp | CAAAGCTGGCAAAACTCAGCTTCCAGTGAAATCATCTaGTCTTGTAACATCTCCCTGAAGGAAAAAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: QSWQNSASSEII*SCNISLKEKER Trigger: TCTCTCTTTTTCCTTCAGGGAGATGTTACAAGACAAGATGATTTCACTGGAAGCTGAGTTTTGCCAGCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000656637.1 ENST00000658771.1 ENST00000667220.1 ENST00000670348.1 |
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| CDS TCA 72 bp | GCTTTACCAAAGACAAAGTTTCATAGGAAATTCACCTaGGTCATGACCCAAGCATATCTTTCTGCAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: ALPKTKFHRKFT*VMTQAYLSAES Trigger: GGATTCTGCAGAAAGATATGCTTGGGTCATGACTCAGGTGAATTTCCTATGAAACTTTGTCTTTGGTAAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000420701.6 ENST00000448804.6 ENST00000654527.1 ENST00000658771.1 ENST00000659910.1 ENST00000668339.1 ENST00000668361.1 ENST00000670348.1 ENST00000671671.1 |
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| CDS CCA 72 bp | GCAAGGCCACTCCCAAACTTACCATATATATATATATaGAACAGCCAAGAATGGGATGCTTTACCAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: ARPLPNLPYIYI*NSQEWDALPKT Trigger: TGTCTTTGGTAAAGCATCCCATTCTTGGCTGTTCCATATATATATATATGGTAAGTTTGGGAGTGGCCTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000420701.6 ENST00000448804.6 ENST00000654527.1 ENST00000668339.1 ENST00000668361.1 |
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| CDS CAA 72 bp | AACTGGGATGAGATGATATCTCCGAGTAGTTTTGATTaGCATTTCCCCATGGCACATGTACAACTATGTAAC | + |
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Preference number: 6 (lower is better) Translates to: NWDEMISPSSFD*HFPMAHVQLCN Trigger: GTTACATAGTTGTACATGTGCCATGGGGAAATGCAAATCAAAACTACTCGGAGATATCATCTCATCCCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658771.1 |
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| CDS CAA 72 bp | TACAGATATCTCTTCAATATACTGATGCCCTTTCTTTaGGATATATCCAGCAGTGGGATTGCTGGTGCATGT | + |
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Preference number: 6 (lower is better) Translates to: YRYLFNILMPFL*DISSSGIAGAC Trigger: ACATGCACCAGCAATCCCACTGCTGGATATATCCAAAAGAAAGGGCATCAGTATATTGAAGAGATATCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658771.1 |
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| CDS CAA 72 bp | CCAGTCACTTTCATCACTGATGTTTGGGTATGGAGCTaGTGGCATCATTGTTGTGTGAATCAAGTATATTTG | + |
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Preference number: 6 (lower is better) Translates to: PVTFITDVWVWS*WHHCCVNQVYL Trigger: CAAATATACTTGATTCACACAACAATGATGCCACAAGCTCCATACCCAAACATCAGTGATGAAAGTGACTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS TCA 72 bp | TTAACCAGGGCAATCATCTGTGGCTATTCTACAAAATaGTCCAGTCAATGGGGATACTTTCTGCCAATTATA | + |
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Preference number: 6 (lower is better) Translates to: LTRAIICGYSTK*SSQWGYFLPII Trigger: TATAATTGGCAGAAAGTATCCCCATTGACTGGATCATTTTGTAGAATAGCCACAGATGATTGCCCTGGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS TCA 72 bp | CTAGCTCTATCTTTCTTGCTGTTAAATGTACACATATaGGTGAATTCCACATCCAGACAATGGAATGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LALSFLLLNVHI*VNSTSRQWNAG Trigger: ACCTGCATTCCATTGTCTGGATGTGGAATTCACTCATATGTGTACATTTAACAGCAAGAAAGATAGAGCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655906.1 |
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| CDS CCA 72 bp | TTTTATAATTCTCCTACTAGAGATCTTTCACCTCCTTaGTTAAGCCATAAATATCCAGGTGTCACACACTCC | + |
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Preference number: 6 (lower is better) Translates to: FYNSPTRDLSPP*LSHKYPGVTHS Trigger: GGAGTGTGTGACACCTGGATATTTATGGCTTAACCAAGGAGGTGAAAGATCTCTAGTAGGAGAATTATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654670.1 |
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| CDS CCA 72 bp | AATGGGGATACTTTCTGCCAATTATATTGGTCACTATaGAAGAAGGATGTCTTAGTCCATTCTTGCTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: NGDTFCQLYWSL*KKDVLVHSCCY Trigger: ATAGCAGCAAGAATGGACTAAGACATCCTTCTTCCATAGTGACCAATATAATTGGCAGAAAGTATCCCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS CAA 90 bp | ACATTCCAACCAATGGTGTACAAGGGTTTCCTTTTCTCCACATCCTaGCTAGCATTTGTTATTGCCTATCTTTTATACAAGAGATTTGGA | + |
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Preference number: 6 (lower is better) Translates to: TFQPMVYKGFLFSTS*LAFVIAYLLYKRFG Trigger: TCCAAATCTCTTGTATAAAAGATAGGCAATAACAAATGCTAGCAAGGATGTGGAGAAAAGGAAACCCTTGTACACCATTGGTTGGAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658771.1 |
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| CDS TCA 72 bp | TGTCTTTCTGTGCCTGGCTTATTTCACTTAACAGTATaGTCTTCAATTCCATCTATGTTGTTGCGAATGACT | + |
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Preference number: 6 (lower is better) Translates to: CLSVPGLFHLTV*SSIPSMLLRMT Trigger: AGTCATTCGCAACAACATAGATGGAATTGAAGATCATACTGTTAAGTGAAATAAGCCAGGCACAGAAAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658771.1 |
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| CDS TCA 72 bp | TACTTTCATTGTGGCAGAAATTATCGAGCTATTGAGTaGATACCTCTCTCTTTTCTTAAGGGAACTAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: YFHCGRNYRAIE*IPLSFLKGTSS Trigger: AGAGCTAGTTCCCTTAAGAAAAGAGAGAGGTATTCACTCAATAGCTCGATAATTTCTGCCACAATGAAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655906.1 |
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| CDS GCA 72 bp | GCAAAATGTGCCAACATCTGGCTTTTAATAATATTATaGCTCTCCAATGACTCCATGAACAAATCACACTTC | + |
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Preference number: 6 (lower is better) Translates to: AKCANIWLLIIL*LSNDSMNKSHF Trigger: GAAGTGTGATTTGTTCATGGAGTCATTGGAGAGGCATAATATTATTAAAAGCCAGATGTTGGCACATTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000659910.1 ENST00000667220.1 ENST00000670348.1 ENST00000671671.1 |
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| CDS GCA 72 bp | ATTCTACAAAATGATCCAGTCAATGGGGATACTTTCTaGCAATTATATTGGTCACTATGGAAGAAGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: ILQNDPVNGDTF*QLYWSLWKKDV Trigger: GACATCCTTCTTCCATAGTGACCAATATAATTGGCAGAAAGTATCCCCATTGACTGGATCATTTTGTAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS CCA 72 bp | ATCATTTTAGAGGCTAAATTCCAATATGTGAACTTTTaGTGGGACACCAACATTCAGACTAAAGCAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: IILEAKFQYVNF*WDTNIQTKARA Trigger: AGCTCTTGCTTTAGTCTGAATGTTGGTGTCCCACCAAAAGTTCACATATTGGAATTTAGCCTCTAAAATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS CAA 72 bp | CAAAGCTGGCAAAACTCAGCTTCCAGTGAAATCATCTaGTCTTGTAACATCTCCAGTTTTGTAAGTAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: QSWQNSASSEII*SCNISSFVSKN Trigger: ATTCTTACTTACAAAACTGGAGATGTTACAAGACAAGATGATTTCACTGGAAGCTGAGTTTTGCCAGCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000419264.2 ENST00000420701.6 ENST00000426240.5 ENST00000448804.6 ENST00000654670.1 ENST00000655906.1 ENST00000666918.1 ENST00000668339.1 |
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| CDS CAA 90 bp | TGTAATGCATATCTTACTTTCATTGTGGCAGAAATTATCGAGCTATaGAGTGAATACCTCTCTCTTTTCTTAAGGGAACTAGCTCTATCT | + |
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Preference number: 6 (lower is better) Translates to: CNAYLTFIVAEIIEL*SEYLSLFLRELALS Trigger: AGATAGAGCTAGTTCCCTTAAGAAAAGAGAGAGGTATTCACTCAATAGCTCGATAATTTCTGCCACAATGAAAGTAAGATATGCATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655906.1 |
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| CDS CCA 72 bp | ATTTTAGAGGCTAAATTCCAATATGTGAACTTTTGGTaGGACACCAACATTCAGACTAAAGCAAGAGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: ILEAKFQYVNFW*DTNIQTKARAK Trigger: TTTAGCTCTTGCTTTAGTCTGAATGTTGGTGTCCCACCAAAAGTTCACATATTGGAATTTAGCCTCTAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS CAA 72 bp | TTAATGTTTCTGCCAGTGTCCTTTGATCAACTCAGATaGTGCATACGTCAAGGACTGTGTTTATTCATAATT | + |
|
Preference number: 6 (lower is better) Translates to: LMFLPVSFDQLR*CIRQGLCLFII Trigger: AATTATGAATAAACACAGTCCTTGACGTATGCACAATCTGAGTTGATCAAAGGACACTGGCAGAAACATTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000659910.1 ENST00000667220.1 ENST00000668756.1 ENST00000670348.1 ENST00000670630.1 ENST00000671671.1 |
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| CDS GCA 72 bp | TCACTATGGAAGAAGGATGTCTTAGTCCATTCTTGCTaGTATAACAAATTACCTTACACAGGACATTTTATA | + |
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Preference number: 6 (lower is better) Translates to: SLWKKDVLVHSC*YNKLPYTGHFI Trigger: TATAAAATGTCCTGTGTAAGGTAATTTGTTATAGCAGCAAGAATGGACTAAGACATCCTTCTTCCATAGTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656637.1 |
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| CDS CAA 72 bp | TATCTTACTTTCATTGTGGCAGAAATTATCGAGCTATaGAGTGAATACCTCTCTCTTTTCTTAAGGGAACTA | + |
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Preference number: 6 (lower is better) Translates to: YLTFIVAEIIEL*SEYLSLFLREL Trigger: TAGTTCCCTTAAGAAAAGAGAGAGGTATTCACTCAATAGCTCGATAATTTCTGCCACAATGAAAGTAAGATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655906.1 |
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