Pregenerated sensors for LINC02262 (Homo sapiens)
Ensembl gene IDs: ENSG00000224932Ensembl transcript IDs: ENST00000416680.1, ENST00000653017.1, ENST00000657433.1, ENST00000662581.1, ENST00000666459.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACTCTGTTGTTGTGCAGTGGTGACCTCATTTCCAAAATGTGCTCCTaGTTCAGAATTTCTATTTCACCTCCAGCAACCATACCCACATTC | + |
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Preference number: 5 (lower is better) Translates to: TLLLCSGDLISKMCS*FRISISPPATIPTF Trigger: GAATGTGGGTATGGTTGCTGGAGGTGAAATAGAAATTCTGAACCAGGAGCACATTTTGGAAATGAGGTCACCACTGCACAACAACAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416680.1 ENST00000653017.1 ENST00000666459.1 |
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| CDS GCA 90 bp | AGATGGAGTAATAGGCACTGCACATACACCGCTGCCTCAATAGCGTaGAGTAAGGCAGACTATATCTTAAGGAGTTTCCAAAAGAAGATT | + |
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Preference number: 5 (lower is better) Translates to: RWSNRHCTYTAASIA*SKADYILRSFQKKI Trigger: AATCTTCTTTTGGAAACTCCTTAAGATATAGTCTGCCTTACTGCACGCTATTGAGGCAGCGGTGTATGTGCAGTGCCTATTACTCCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657433.1 ENST00000662581.1 |
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| CDS TCA 90 bp | CGGTTTCAGGACACAGACTTCTTTTACTCTGTTGTTGTGCAGTGGTaGCCTCATTTCCAAAATGTGCTCCTGGTTCAGAATTTCTATTTC | + |
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Preference number: 5 (lower is better) Translates to: RFQDTDFFYSVVVQW*PHFQNVLLVQNFYF Trigger: GAAATAGAAATTCTGAACCAGGAGCACATTTTGGAAATGAGGTCACCACTGCACAACAACAGAGTAAAAGAAGTCTGTGTCCTGAAACCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416680.1 ENST00000653017.1 ENST00000666459.1 |
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| CDS TCA 90 bp | TTGCTGACTGTCACCCAAGAGGCTTCACTGAGTGAAATTCTTCATTaGATTTTCTACTCTAGACTAGCTCTGAGCCTAGCAGTCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LLTVTQEASLSEILH*IFYSRLALSLAVLK Trigger: TTTCAAGACTGCTAGGCTCAGAGCTAGTCTAGAGTAGAAAATTCAATGAAGAATTTCACTCAGTGAAGCCTCTTGGGTGACAGTCAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653017.1 ENST00000666459.1 |
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| CDS GCA 90 bp | TTCACCTCCAGCAACCATACCCACATTCCAACCAACTCAATAGCGTaGAGTAAGGCAGACTATATCTTAAGGAGTTTCCAAAAGAAGATT | + |
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Preference number: 5 (lower is better) Translates to: FTSSNHTHIPTNSIA*SKADYILRSFQKKI Trigger: AATCTTCTTTTGGAAACTCCTTAAGATATAGTCTGCCTTACTGCACGCTATTGAGTTGGTTGGAATGTGGGTATGGTTGCTGGAGGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666459.1 |
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| CDS CCA 90 bp | AAAATATCAAAAGACAATGGTGAGTTCTTCCATTTCTTGTCAAGATaGAGTAATAGGCACTGCACATACACCGCTGCCTCAATAGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: KISKDNGEFFHFLSR*SNRHCTYTAASIAC Trigger: GCACGCTATTGAGGCAGCGGTGTATGTGCAGTGCCTATTACTCCATCTTGACAAGAAATGGAAGAACTCACCATTGTCTTTTGATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657433.1 ENST00000662581.1 |
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| CDS CCA 90 bp | AATTTCTTTCTGTCTCTTGTTAAAATAAGGCAGGAGCTACAGGACTaGAATGGTGTTTCTCGGTTTCAGGACACAGACTTCTTTTACTCT | + |
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Preference number: 5 (lower is better) Translates to: NFFLSLVKIRQELQD*NGVSRFQDTDFFYS Trigger: AGAGTAAAAGAAGTCTGTGTCCTGAAACCGAGAAACACCATTCCAGTCCTGTAGCTCCTGCCTTATTTTAACAAGAGACAGAAAGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416680.1 ENST00000653017.1 ENST00000666459.1 |
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| CDS CCA 90 bp | AGTATAGTGCATAGTAACTATACCAGGATTCTATCATATTGGCCATaGTATCTTGAGACATTCTCTCCTAAGTTTCTAGAGGTATGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SIVHSNYTRILSYWP*YLETFSPKFLEVWL Trigger: CAGCCATACCTCTAGAAACTTAGGAGAGAATGTCTCAAGATACCATGGCCAATATGATAGAATCCTGGTATAGTTACTATGCACTATACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653017.1 ENST00000666459.1 |
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| CDS TCA 90 bp | CAAACTGCAGATATTCACCAACCTTCCTATACGTGTAGCATACTATaGATGAAGTGTTACTCTTTGTGCGGATGTATAAAATTGCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: QTADIHQPSYTCSIL*MKCYSLCGCIKLPF Trigger: GAAAGGCAATTTTATACATCCGCACAAAGAGTAACACTTCATTCATAGTATGCTACACGTATAGGAAGGTTGGTGAATATCTGCAGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657433.1 ENST00000662581.1 |
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| CDS CCA 90 bp | GCAAATAGTATAGTGCATAGTAACTATACCAGGATTCTATCATATTaGCCATGGTATCTTGAGACATTCTCTCCTAAGTTTCTAGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: ANSIVHSNYTRILSY*PWYLETFSPKFLEV Trigger: TACCTCTAGAAACTTAGGAGAGAATGTCTCAAGATACCATGGCCAATATGATAGAATCCTGGTATAGTTACTATGCACTATACTATTTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653017.1 ENST00000666459.1 |
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| CDS CAA 90 bp | CCACATTCCAACCAACAGATGCCAAGCAGATGTAGCCTCCTGACCTaGGACTCTCCAGCCTCCAGAAATGAAAAGAGCATCAGTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: PHSNQQMPSRCSLLT*DSPASRNEKSISDL Trigger: CAGATCACTGATGCTCTTTTCATTTCTGGAGGCTGGAGAGTCCAAGGTCAGGAGGCTACATCTGCTTGGCATCTGTTGGTTGGAATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416680.1 |
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| CDS GCA 72 bp | GACCTTGGACTCTCCAGCCTCCAGAACTCAATAGCGTaGAGTAAGGCAGACTATATCTTAAGGAGTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: DLGLSSLQNSIA*SKADYILRSFQ Trigger: TTGGAAACTCCTTAAGATATAGTCTGCCTTACTGCACGCTATTGAGTTCTGGAGGCTGGAGAGTCCAAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653017.1 |
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| CDS GCA 72 bp | AATAGGCACTGCACATACACCGCTGCCTCAATAGCGTaGAGTAAGGCAGACTATATCTTAAGGAGTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: NRHCTYTAASIA*SKADYILRSFQ Trigger: TTGGAAACTCCTTAAGATATAGTCTGCCTTACTGCACGCTATTGAGGCAGCGGTGTATGTGCAGTGCCTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657433.1 ENST00000662581.1 |
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| CDS GCA 72 bp | TTCTTCCATTTCTTGTCAAGATGGAGTAATAGGCACTaGACATACACCGCTGCCTCAATAGCGTGCAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: FFHFLSRWSNRH*TYTAASIACSK Trigger: CTTACTGCACGCTATTGAGGCAGCGGTGTATGTGCAGTGCCTATTACTCCATCTTGACAAGAAATGGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657433.1 ENST00000662581.1 |
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| CDS CCA 72 bp | AAAGACAATGGTGAGTTCTTCCATTTCTTGTCAAGATaGAGTAATAGGCACTGCACATACACCGCTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: KDNGEFFHFLSR*SNRHCTYTAAS Trigger: TGAGGCAGCGGTGTATGTGCAGTGCCTATTACTCCATCTTGACAAGAAATGGAAGAACTCACCATTGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657433.1 ENST00000662581.1 |
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| CDS TCA 72 bp | GACACAGACTTCTTTTACTCTGTTGTTGTGCAGTGGTaGCCTCATTTCCAAAATGTGCTCCTGGTTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: DTDFFYSVVVQW*PHFQNVLLVQN Trigger: ATTCTGAACCAGGAGCACATTTTGGAAATGAGGTCACCACTGCACAACAACAGAGTAAAAGAAGTCTGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416680.1 ENST00000653017.1 ENST00000666459.1 |
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| CDS GCA 72 bp | AGCAACCATACCCACATTCCAACCAACTCAATAGCGTaGAGTAAGGCAGACTATATCTTAAGGAGTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SNHTHIPTNSIA*SKADYILRSFQ Trigger: TTGGAAACTCCTTAAGATATAGTCTGCCTTACTGCACGCTATTGAGTTGGTTGGAATGTGGGTATGGTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666459.1 |
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| CDS GCA 72 bp | TACATTTATTGCGTTGAGCCACGGAAACTTGGAGATTaGTTCTTATCACAGCATAAATCAGCCTGCTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: YIYCVEPRKLGD*FLSQHKSACCE Trigger: TTCACAGCAGGCTGATTTATGCTGTGATAAGAAGCAATCTCCAAGTTTCCGTGGCTCAACGCAATAAATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416680.1 ENST00000653017.1 ENST00000666459.1 |
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| CDS CAA 72 bp | GTTAGGTATACATTTATTGCGTTGAGCCACGGAAACTaGGAGATTGCTTCTTATCACAGCATAAATCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: VRYTFIALSHGN*EIASYHSINQP Trigger: AGGCTGATTTATGCTGTGATAAGAAGCAATCTCCAAGTTTCCGTGGCTCAACGCAATAAATGTATACCTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416680.1 ENST00000653017.1 ENST00000666459.1 |
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| CDS TCA 72 bp | TCTTTTCTAGTTGAAATTAATACGCGGGACAGTCTGTaGAGAAGACTGCATTTCAGCAATTGTAATGTCACT | + |
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Preference number: 6 (lower is better) Translates to: SFLVEINTRDSL*RRLHFSNCNVT Trigger: AGTGACATTACAATTGCTGAAATGCAGTCTTCTTCACAGACTGTCCCGCGTATTAATTTCAACTAGAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653017.1 ENST00000666459.1 |
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| CDS CCA 72 bp | CATAGTAACTATACCAGGATTCTATCATATTGGCCATaGTATCTTGAGACATTCTCTCCTAAGTTTCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: HSNYTRILSYWP*YLETFSPKFLE Trigger: CTCTAGAAACTTAGGAGAGAATGTCTCAAGATACCATGGCCAATATGATAGAATCCTGGTATAGTTACTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653017.1 ENST00000666459.1 |
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| CDS CAA 72 bp | AAGCACTCGATTGAAAGTATGATCTCTGTTCAAAACTaGTCTTCATCAATTTCTTGCTCTGTGGCTGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: KHSIESMISVQN*SSSISCSVAVK Trigger: TTTCACAGCCACAGAGCAAGAAATTGATGAAGACAAGTTTTGAACAGAGATCATACTTTCAATCGAGTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662581.1 |
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| CDS TCA 72 bp | GATATTCACCAACCTTCCTATACGTGTAGCATACTATaGATGAAGTGTTACTCTTTGTGCGGATGTATAAAA | + |
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Preference number: 6 (lower is better) Translates to: DIHQPSYTCSIL*MKCYSLCGCIK Trigger: TTTTATACATCCGCACAAAGAGTAACACTTCATTCATAGTATGCTACACGTATAGGAAGGTTGGTGAATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657433.1 ENST00000662581.1 |
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| CDS CCA 72 bp | ATAGTGCATAGTAACTATACCAGGATTCTATCATATTaGCCATGGTATCTTGAGACATTCTCTCCTAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: IVHSNYTRILSY*PWYLETFSPKF Trigger: AAACTTAGGAGAGAATGTCTCAAGATACCATGGCCAATATGATAGAATCCTGGTATAGTTACTATGCACTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653017.1 ENST00000666459.1 |
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| CDS TCA 72 bp | GCAGTAAGGTATAGTGAAAGCACTCGATTGAAAGTATaGTCTCTGTTCAAAACTTGTCTTCATCAATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: AVRYSESTRLKV*SLFKTCLHQFL Trigger: AAGAAATTGATGAAGACAAGTTTTGAACAGAGATCATACTTTCAATCGAGTGCTTTCACTATACCTTACTGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662581.1 |
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