Pregenerated sensors for LINC02261 (Homo sapiens)
Ensembl gene IDs: ENSG00000249699Ensembl transcript IDs: ENST00000512873.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTCAGGGGCAGCACCGGACCTGATGCAGGAAGATCTGTCTGGCAGTaGAGGAAGCTTCAGATGAATTTTCTTAAGTGGGTGAGTGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: VRGSTGPDAGRSVWQ*RKLQMNFLKWVSGW Trigger: CCAACCACTCACCCACTTAAGAAAATTCATCTGAAGCTTCCTCCACTGCCAGACAGATCTTCCTGCATCAGGTCCGGTGCTGCCCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS CCA 90 bp | TTTCATGTCAGGGGCAGCACCGGACCTGATGCAGGAAGATCTGTCTaGCAGTGGAGGAAGCTTCAGATGAATTTTCTTAAGTGGGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: FHVRGSTGPDAGRSV*QWRKLQMNFLKWVS Trigger: ACTCACCCACTTAAGAAAATTCATCTGAAGCTTCCTCCACTGCCAGACAGATCTTCCTGCATCAGGTCCGGTGCTGCCCCTGACATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS TCA 90 bp | AGAGTTGAGGTTCAAATGGGCTCCTCAAGGCCAAGTCTCTCTGTTTaGACAGCTTTCCACCGACCTTTGTCCTCATCACAGGTGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: RVEVQMGSSRPSLSV*TAFHRPLSSSQVIS Trigger: AGAGATCACCTGTGATGAGGACAAAGGTCGGTGGAAAGCTGTTCAAACAGAGAGACTTGGCCTTGAGGAGCCCATTTGAACCTCAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS TCA 90 bp | TCTCTGTTTGAACAGCTTTCCACCGACCTTTGTCCTCATCACAGGTaGTCTCTTGTAAACGTGTCACCAAACTCCATGTGCAGAGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: SLFEQLSTDLCPHHR*SLVNVSPNSMCRAK Trigger: TTTTGCTCTGCACATGGAGTTTGGTGACACGTTTACAAGAGATCACCTGTGATGAGGACAAAGGTCGGTGGAAAGCTGTTCAAACAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS TCA 90 bp | AGCAAGGAGTGGCCAGTTCATGAAGGGCATGGCATGCCATGTACATaGGTTAAGATTATGACCTTAAAAATGGGGAGTTCTGAAGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SKEWPVHEGHGMPCT*VKIMTLKMGSSEVE Trigger: CTCCACTTCAGAACTCCCCATTTTTAAGGTCATAATCTTAACTCATGTACATGGCATGCCATGCCCTTCATGAACTGGCCACTCCTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS CCA 90 bp | GTTTGCTATGCCCTTTTGGTCATCGGTAGATTGATTTTCATGTTCTaGCTACACAGACAGTTAGCAAAGCTGAGCATTGTTTCTTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: VCYALLVIGRLIFMF*LHRQLAKLSIVSCF Trigger: AAAGCAAGAAACAATGCTCAGCTTTGCTAACTGTCTGTGTAGCCAGAACATGAAAATCAATCTACCGATGACCAAAAGGGCATAGCAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS TCA 90 bp | AAGAGGGAATCCTCTCTAACTCATTTTATGAGGCCAGCATCATCCTaGTACCAAAGCCTTTCAATTCTTCAGAGTGTTTCAATGTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: KRESSLTHFMRPASS*YQSLSILQSVSMSR Trigger: TCTAGACATTGAAACACTCTGAAGAATTGAAAGGCTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAGTTAGAGAGGATTCCCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS TCA 72 bp | GTTCAAATGGGCTCCTCAAGGCCAAGTCTCTCTGTTTaGACAGCTTTCCACCGACCTTTGTCCTCATCACAG | + |
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Preference number: 6 (lower is better) Translates to: VQMGSSRPSLSV*TAFHRPLSSSQ Trigger: CTGTGATGAGGACAAAGGTCGGTGGAAAGCTGTTCAAACAGAGAGACTTGGCCTTGAGGAGCCCATTTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS CAA 72 bp | GGTTCAAATGGGCTCCTCAAGGCCAAGTCTCTCTGTTaGAACAGCTTTCCACCGACCTTTGTCCTCATCACA | + |
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Preference number: 6 (lower is better) Translates to: GSNGLLKAKSLC*NSFPPTFVLIT Trigger: TGTGATGAGGACAAAGGTCGGTGGAAAGCTGTTCAAACAGAGAGACTTGGCCTTGAGGAGCCCATTTGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS TCA 72 bp | GAACAGCTTTCCACCGACCTTTGTCCTCATCACAGGTaGTCTCTTGTAAACGTGTCACCAAACTCCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: EQLSTDLCPHHR*SLVNVSPNSMC Trigger: GCACATGGAGTTTGGTGACACGTTTACAAGAGATCACCTGTGATGAGGACAAAGGTCGGTGGAAAGCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS CCA 72 bp | AAGCTTCAGATGAATTTTCTTAAGTGGGTGAGTGGTTaGCTTGATCCCAGCCCTTCTCCACCTCAGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: KLQMNFLKWVSG*LDPSPSPPQDS Trigger: AGAGTCCTGAGGTGGAGAAGGGCTGGGATCAAGCCAACCACTCACCCACTTAAGAAAATTCATCTGAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS TCA 72 bp | CAATTAGCCAACACAGTCAATGAACAGGTCAAGAGTTaGGGTTCAAATGGGCTCCTCAAGGCCAAGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: QLANTVNEQVKS*GSNGLLKAKSL Trigger: GAGAGACTTGGCCTTGAGGAGCCCATTTGAACCTCAACTCTTGACCTGTTCATTGACTGTGTTGGCTAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS CAA 90 bp | GCCAAAAACACCCAACTCCACAGGGATGTTGTTTGCTATGCCCTTTaGGTCATCGGTAGATTGATTTTCATGTTCTGGCTACACAGACAG | + |
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Preference number: 6 (lower is better) Translates to: AKNTQLHRDVVCYAL*VIGRLIFMFWLHRQ Trigger: CTGTCTGTGTAGCCAGAACATGAAAATCAATCTACCGATGACCAAAAGGGCATAGCAAACAACATCCCTGTGGAGTTGGGTGTTTTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS GCA 72 bp | CTACACAGACAGTTAGCAAAGCTGAGCATTGTTTCTTaGTTTGCACTGAAGACCCAATTAGCCAACACAGTC | + |
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Preference number: 6 (lower is better) Translates to: LHRQLAKLSIVS*FALKTQLANTV Trigger: GACTGTGTTGGCTAATTGGGTCTTCAGTGCAAAGCAAGAAACAATGCTCAGCTTTGCTAACTGTCTGTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS CAA 72 bp | GCTACACAGACAGTTAGCAAAGCTGAGCATTGTTTCTaGCTTTGCACTGAAGACCCAATTAGCCAACACAGT | + |
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Preference number: 6 (lower is better) Translates to: ATQTVSKAEHCF*LCTEDPISQHS Trigger: ACTGTGTTGGCTAATTGGGTCTTCAGTGCAAAGCAAGAAACAATGCTCAGCTTTGCTAACTGTCTGTGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS TCA 72 bp | TGGCCAGTTCATGAAGGGCATGGCATGCCATGTACATaGGTTAAGATTATGACCTTAAAAATGGGGAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: WPVHEGHGMPCT*VKIMTLKMGSS Trigger: AGAACTCCCCATTTTTAAGGTCATAATCTTAACTCATGTACATGGCATGCCATGCCCTTCATGAACTGGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS CCA 72 bp | TTGTTACACCAACTTGGCATTTCCTCCAGCAATGTATaGGAGTTCCATTTCCTCTCTGTTTTTACCAACACT | + |
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Preference number: 6 (lower is better) Translates to: LLHQLGISSSNV*EFHFLSVFTNT Trigger: AGTGTTGGTAAAAACAGAGAGGAAATGGAACTCCCATACATTGCTGGAGGAAATGCCAAGTTGGTGTAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS CCA 72 bp | TGTCACTATGCATTAGGTTATATTCCCTGGATTTACTaGATTTACTGTTGTCCCCTCAAGTATCCTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CHYALGYIPWIY*IYCCPLKYPQG Trigger: TCCCTGAGGATACTTGAGGGGACAACAGTAAATCCAGTAAATCCAGGGAATATAACCTAATGCATAGTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS TCA 72 bp | TCCTCTCTAACTCATTTTATGAGGCCAGCATCATCCTaGTACCAAAGCCTTTCAATTCTTCAGAGTGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSLTHFMRPASS*YQSLSILQSVS Trigger: TGAAACACTCTGAAGAATTGAAAGGCTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAGTTAGAGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS CAA 72 bp | CACATTGTAAAGTGTGTCGATAGTGCATTCCTTTTATaGCTGGGTAGTATTGTGCTGCATGGATATACGACA | + |
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Preference number: 6 (lower is better) Translates to: HIVKCVDSAFLL*LGSIVLHGYTT Trigger: TGTCGTATATCCATGCAGCACAATACTACCCAGCAATAAAAGGAATGCACTATCGACACACTTTACAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS CAA 72 bp | GTGTCGATAGTGCATTCCTTTTATTGCTGGGTAGTATaGTGCTGCATGGATATACGACAATTTGTTTATTCA | + |
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Preference number: 6 (lower is better) Translates to: VSIVHSFYCWVV*CCMDIRQFVYS Trigger: TGAATAAACAAATTGTCGTATATCCATGCAGCACAATACTACCCAGCAATAAAAGGAATGCACTATCGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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| CDS GCA 72 bp | ATAGTGCATTCCTTTTATTGCTGGGTAGTATTGTGCTaGATGGATATACGACAATTTGTTTATTCATTTACC | + |
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Preference number: 6 (lower is better) Translates to: IVHSFYCWVVLC*MDIRQFVYSFT Trigger: GGTAAATGAATAAACAAATTGTCGTATATCCATGCAGCACAATACTACCCAGCAATAAAAGGAATGCACTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512873.1 |
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