Pregenerated sensors for LINC02254 (Homo sapiens)
Ensembl gene IDs: ENSG00000259664Ensembl transcript IDs: ENST00000558621.2, ENST00000653612.1, ENST00000653998.1, ENST00000655922.1, ENST00000656917.1, ENST00000657749.1, ENST00000658159.1, ENST00000658446.1, ENST00000658901.1, ENST00000662202.1, ENST00000668613.1, ENST00000669932.1, ENST00000671366.1
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACAGCTGTTTCTGACAGCTCCCTGATTTGCCAGTGCTGTGTTGGCTaGCGGCACAGGAGGCCCGTTCTGTATTCTGCTGCTGGCACCGGG | + |
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Preference number: 5 (lower is better) Translates to: TAVSDSSLICQCCVG*RHRRPVLYSAAGTG Trigger: CCCGGTGCCAGCAGCAGAATACAGAACGGGCCTCCTGTGCCGGCAGCCAACACAGCACTGGCAAATCAGGGAGCTGTCAGAAACAGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658901.1 |
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| CDS CCA 90 bp | ATTAACCAGCACCTGGCTGCTGAAGCTAGAGCCCCAGCTCTCCTTTaGAGCACTCAGGCCACTTCCTTCCCGCTCAAGACAGGTCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: INQHLAAEARAPALL*STQATSFPLKTGQW Trigger: CCACTGACCTGTCTTGAGCGGGAAGGAAGTGGCCTGAGTGCTCCAAAGGAGAGCTGGGGCTCTAGCTTCAGCAGCCAGGTGCTGGTTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS TCA 90 bp | GAGGCCCGTTCTGTATTCTGCTGCTGGCACCGGGGGATATGCAAATaGACACATGAATCAGTTGTCACCACCACAGACACTGTGCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: EARSVFCCWHRGICK*THESVVTTTDTVQG Trigger: TCCCTGCACAGTGTCTGTGGTGGTGACAACTGATTCATGTGTTCATTTGCATATCCCCCGGTGCCAGCAGCAGAATACAGAACGGGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658901.1 |
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| CDS CCA 90 bp | ACTAGGAGTAAGAAACCCTTTCTTCCAGTCCAATTAACCAGCACCTaGCTGCTGAAGCTAGAGCCCCAGCTCTCCTTTGGAGCACTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TRSKKPFLPVQLTST*LLKLEPQLSFGALR Trigger: CCTGAGTGCTCCAAAGGAGAGCTGGGGCTCTAGCTTCAGCAGCCAGGTGCTGGTTAATTGGACTGGAAGAAAGGGTTTCTTACTCCTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS TCA 90 bp | TTCTGTATTCTGCTGCTGGCACCGGGGGATATGCAAATGAACACATaGATCAGTTGTCACCACCACAGACACTGTGCAGGGAGACGATCA | + |
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Preference number: 5 (lower is better) Translates to: FCILLLAPGDMQMNT*ISCHHHRHCAGRRS Trigger: TGATCGTCTCCCTGCACAGTGTCTGTGGTGGTGACAACTGATTCATGTGTTCATTTGCATATCCCCCGGTGCCAGCAGCAGAATACAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658901.1 |
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| CDS TCA 90 bp | TTGCTAGTACTGGTCCTGAGTGTGACTAATAAGGCTGCTCGTCTATaGCAGAGTGGGAATGGCACCACTAAGAGTGAAAGGAGGCGATTC | + |
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Preference number: 5 (lower is better) Translates to: LLVLVLSVTNKAARL*QSGNGTTKSERRRF Trigger: GAATCGCCTCCTTTCACTCTTAGTGGTGCCATTCCCACTCTGTCATAGACGAGCAGCCTTATTAGTCACACTCAGGACCAGTACTAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS CCA 90 bp | TGCTTTGTGCTACAGGATGCAGTGCCAAGACAAATCATCAGGTCTTaGGGTGAATGTTTAGTTATCATGGATGATGCGTGCCGTCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: CFVLQDAVPRQIIRS*GECLVIMDDACRRP Trigger: TGGCCGACGGCACGCATCATCCATGATAACTAAACATTCACCCCAAGACCTGATGATTTGTCTTGGCACTGCATCCTGTAGCACAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS GCA 90 bp | TCACTCCTGTTTCTTTTCCAACTTCTAGGGGCTGCTTGTGTTCCTTaGCTCCTGGCCATTCTCTCCAAAGACAGCAGCATCTTCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: SLLFLFQLLGAACVP*LLAILSKDSSIFKS Trigger: AGATTTGAAGATGCTGCTGTCTTTGGAGAGAATGGCCAGGAGGCAAGGAACACAAGCAGCCCCTAGAAGTTGGAAAAGAAACAGGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000653612.1 ENST00000657749.1 ENST00000658159.1 ENST00000662202.1 |
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| CDS GCA 90 bp | TATGCAAATGAACACATGAATCAGTTGTCACCACCACAGACACTGTaGAGGGAGACGATCAGAATGTGTGGGGAGCTTAGTTGGCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: YANEHMNQLSPPQTL*RETIRMCGELSWLQ Trigger: TTGCAGCCAACTAAGCTCCCCACACATTCTGATCGTCTCCCTGCACAGTGTCTGTGGTGGTGACAACTGATTCATGTGTTCATTTGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658901.1 |
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| CDS CCA 90 bp | ACGTCCGTCTCCAAAACCGCCAACTTTGCTTCTTCCACTACCGCTTaGCTCCCTGTAGTCAATCTGCATGTGATTCCTATTAAAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: TSVSKTANFASSTTA*LPVVNLHVIPIKIL Trigger: CAGGATTTTAATAGGAATCACATGCAGATTGACTACAGGGAGCCAAGCGGTAGTGGAAGAAGCAAAGTTGGCGGTTTTGGAGACGGACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000558621.2 ENST00000653612.1 ENST00000653998.1 ENST00000655922.1 ENST00000656917.1 ENST00000657749.1 ENST00000658159.1 ENST00000658446.1 ENST00000658901.1 ENST00000662202.1 ENST00000668613.1 ENST00000671366.1 |
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| CDS TCA 90 bp | CCTGGCCATTCTCTCCAAAGACAGCAGCATCTTCAAATCTGTCTTTaGTTCCGCTTCCATTATCGCATCTTCTCTAGCTCGACATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: PGHSLQRQQHLQICL*FRFHYRIFSSSTSV Trigger: CACAGATGTCGAGCTAGAGAAGATGCGATAATGGAAGCGGAATCAAAGACAGATTTGAAGATGCTGCTGTCTTTGGAGAGAATGGCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653612.1 ENST00000668613.1 |
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| CDS GCA 90 bp | GGAGAATGGGGCAATGCACACTTTAGACCCATCTTCTCAGTGGCTTaGAAGCAAGGGTCTTTAAAGGTATGGGTAACTTTCAAGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GEWGNAHFRPIFSVA*KQGSLKVWVTFKKA Trigger: TGCCTTCTTGAAAGTTACCCATACCTTTAAAGACCCTTGCTTGCAAGCCACTGAGAAGATGGGTCTAAAGTGTGCATTGCCCCATTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000653612.1 ENST00000653998.1 ENST00000655922.1 ENST00000657749.1 ENST00000658159.1 ENST00000662202.1 |
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| CDS TCA 90 bp | CCTGGCCATTCTCTCCAAAGACAGCAGCATCTTCAAATCTGTCTTTaGTTCCGCTTCCATTATCGCATCTTCTCTAGCTCTTCTAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: PGHSLQRQQHLQICL*FRFHYRIFSSSSRE Trigger: TTCCCTAGAAGAGCTAGAGAAGATGCGATAATGGAAGCGGAATCAAAGACAGATTTGAAGATGCTGCTGTCTTTGGAGAGAATGGCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000558621.2 ENST00000653998.1 ENST00000658159.1 ENST00000662202.1 |
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| CDS TCA 90 bp | CCTGGCCATTCTCTCCAAAGACAGCAGCATCTTCAAATCTGTCTTTaGTTCCGCTTCCATTATCGCATCTTCTCTAGCTCTTCGACATCT | + |
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Preference number: 5 (lower is better) Translates to: PGHSLQRQQHLQICL*FRFHYRIFSSSSTS Trigger: AGATGTCGAAGAGCTAGAGAAGATGCGATAATGGAAGCGGAATCAAAGACAGATTTGAAGATGCTGCTGTCTTTGGAGAGAATGGCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656917.1 ENST00000657749.1 |
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| CDS GCA 90 bp | AATAAGGAGAATCTTTTCCAACTTCTAGGGGCTGCTTGTGTTCCTTaGCTCCTGGCCATTCTCTCCAAAGACAGCAGCATCTTCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: NKENLFQLLGAACVP*LLAILSKDSSIFKS Trigger: AGATTTGAAGATGCTGCTGTCTTTGGAGAGAATGGCCAGGAGGCAAGGAACACAAGCAGCCCCTAGAAGTTGGAAAAGATTCTCCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653998.1 |
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| CDS CCA 90 bp | AGCTGCTGGCAAGGCTGTAGAGAAATAGGAACACTTTTACATGGTTaGTGGAGGTGTAAATTAGTTTGGCCATTGTGGAAGACAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SCWQGCREIGTLLHG*WRCKLVWPLWKTVR Trigger: CCTCACTGTCTTCCACAATGGCCAAACTAATTTACACCTCCACCAACCATGTAAAAGTGTTCCTATTTCTCTACAGCCTTGCCAGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS CCA 90 bp | CACCCAAGAGTACTAGCATTGGCGTTGTACATCATGATCACCTTATaGGGGTTGCTTATGCTAGTAGGATCTGATTGGCTCACACTAATT | + |
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Preference number: 5 (lower is better) Translates to: HPRVLALALYIMITL*GLLMLVGSDWLTLI Trigger: AATTAGTGTGAGCCAATCAGATCCTACTAGCATAAGCAACCCCCATAAGGTGATCATGATGTACAACGCCAATGCTAGTACTCTTGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS CCA 90 bp | GGCCTGATCAGGCTCACTCCCGAGAGTCAAAGGCTGCGTATTGTATaGATGCAGAGGATAAAAGTTCAAAGTTTCCAGCTAAATGTATTT | + |
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Preference number: 5 (lower is better) Translates to: GLIRLTPESQRLRIV*MQRIKVQSFQLNVF Trigger: AAATACATTTAGCTGGAAACTTTGAACTTTTATCCTCTGCATCCATACAATACGCAGCCTTTGACTCTCGGGAGTGAGCCTGATCAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669932.1 |
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| CDS CCA 90 bp | GTATTACTGGTTTCCCTCAGGTTCATCTTTCCGAGGCAGTTTATATaGAGCAACCTCTTAGCATTAGGAATCATTCCAGGTTTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: VLLVSLRFIFPRQFI*SNLLALGIIPGFFF Trigger: GAAGAAGAAACCTGGAATGATTCCTAATGCTAAGAGGTTGCTCCATATAAACTGCCTCGGAAAGATGAACCTGAGGGAAACCAGTAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658446.1 |
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| CDS TCA 90 bp | CCTCTTAACAATGAACAAGCCCGGATTTCTCCTCTCCTTCCACAATaGCATATGTTCATTAAGCAGCACTATGTATGCACAAGTGCATAT | + |
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Preference number: 5 (lower is better) Translates to: PLNNEQARISPLLPQ*HMFIKQHYVCTSAY Trigger: ATATGCACTTGTGCATACATAGTGCTGCTTAATGAACATATGTCATTGTGGAAGGAGAGGAGAAATCCGGGCTTGTTCATTGTTAAGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS TCA 90 bp | ATCGTCAAAATTCAGATAGAAACCGAAATCCCCAATCCACTCTATTaGCTCACTGACATTATCACAAAGGGAGTGTGTGATGACCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: IVKIQIETEIPNPLY*LTDIITKGVCDDPS Trigger: TGAAGGGTCATCACACACTCCCTTTGTGATAATGTCAGTGAGTCAATAGAGTGGATTGGGGATTTCGGTTTCTATCTGAATTTTGACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS TCA 90 bp | AGTTCTAGATCCCTGAGGAATTGCCACACTAACTTTCACAATGGTTaGACTAGTTTACAGTCCCACCAACAGTGTAAAGGTGTTCCTATT | + |
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Preference number: 5 (lower is better) Translates to: SSRSLRNCHTNFHNG*TSLQSHQQCKGVPI Trigger: AATAGGAACACCTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGAAAGTTAGTGTGGCAATTCCTCAGGGATCTAGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658446.1 |
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| CDS TCA 90 bp | GTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTaGGGAATTGCCACACTAACTTTCACAATGGTTGAACTAGTTTAC | + |
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Preference number: 5 (lower is better) Translates to: VMGWLGQMVFLVLDP*GIATLTFTMVELVY Trigger: GTAAACTAGTTCAACCATTGTGAAAGTTAGTGTGGCAATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658446.1 |
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| CDS GCA 90 bp | TTTATTTTCACTTTGTGGCATTCATTAGATTTCAGTTCAGGAAAGTaGAATCTGTTCCTCGCCAATCACCAACAGAAACCCCAGTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: FIFTLWHSLDFSSGK*NLFLANHQQKPQFH Trigger: GTGGAACTGGGGTTTCTGTTGGTGATTGGCGAGGAACAGATTGCACTTTCCTGAACTGAAATCTAATGAATGCCACAAAGTGAAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658901.1 |
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| CDS CCA 90 bp | TTTGCAAATCACTTGAACCTGCTGTTATCATTTAAACAGCAGCAGTaGGAAATCGTGCACATTCAAAGCAACACTGCATTCATGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: FANHLNLLLSFKQQQ*EIVHIQSNTAFMTG Trigger: TCCTGTCATGAATGCAGTGTTGCTTTGAATGTGCACGATTTCCCACTGCTGCTGTTTAAATGATAACAGCAGGTTCAAGTGATTTGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669932.1 |
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| CDS CCA 90 bp | ACACTTTTACATGGTTGGTGGAGGTGTAAATTAGTTTGGCCATTGTaGAAGACAGTGAGGCAATTCCTCAAGGATCTAGAACCAGAAATA | + |
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Preference number: 5 (lower is better) Translates to: TLLHGWWRCKLVWPL*KTVRQFLKDLEPEI Trigger: TATTTCTGGTTCTAGATCCTTGAGGAATTGCCTCACTGTCTTCCACAATGGCCAAACTAATTTACACCTCCACCAACCATGTAAAAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS CCA 90 bp | GAAATAGGAACACTTTTACATGGTTGGTGGAGGTGTAAATTAGTTTaGCCATTGTGGAAGACAGTGAGGCAATTCCTCAAGGATCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: EIGTLLHGWWRCKLV*PLWKTVRQFLKDLE Trigger: TTCTAGATCCTTGAGGAATTGCCTCACTGTCTTCCACAATGGCCAAACTAATTTACACCTCCACCAACCATGTAAAAGTGTTCCTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS CCA 90 bp | ATCATGATCACCTTATGGGGGTTGCTTATGCTAGTAGGATCTGATTaGCTCACACTAATTCTATTCCCTGTCTATGTCTATTGTAGAACT | + |
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Preference number: 5 (lower is better) Translates to: IMITLWGLLMLVGSD*LTLILFPVYVYCRT Trigger: AGTTCTACAATAGACATAGACAGGGAATAGAATTAGTGTGAGCCAATCAGATCCTACTAGCATAAGCAACCCCCATAAGGTGATCATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS TCA 90 bp | GTTCCCCCTTATCACTCCTGTTTCTGCATTCTTTCCATACTAATATaGACCATCAGCACCTCAAGGATGAAATCATCAGCATTTTACATT | + |
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Preference number: 5 (lower is better) Translates to: VPPYHSCFCILSILI*TISTSRMKSSAFYI Trigger: AATGTAAAATGCTGATGATTTCATCCTTGAGGTGCTGATGGTTCATATTAGTATGGAAAGAATGCAGAAACAGGAGTGATAAGGGGGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653998.1 |
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| CDS TCA 90 bp | AAGATTTTTCTAGAAACAATCATCTTGAAATCATCTACTCTTTCATaGTCTCACAGGGAAGACCCCAAGGCCAGATTTCCTGGAGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: KIFLETIILKSSTLS*SHREDPKARFPGED Trigger: ATCTTCTCCAGGAAATCTGGCCTTGGGGTCTTCCCTGTGAGATCATGAAAGAGTAGATGATTTCAAGATGATTGTTTCTAGAAAAATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669932.1 |
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| CDS CCA 90 bp | AAAAAGAAAGAAAGAATAAAAGATAGAAAGGACAGGCATAACCACTaGTTTCTGTTGCTTTGTGCTACAGGATGCAGTGCCAAGACAAAT | + |
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Preference number: 5 (lower is better) Translates to: KKKERIKDRKDRHNH*FLLLCATGCSAKTN Trigger: ATTTGTCTTGGCACTGCATCCTGTAGCACAAAGCAACAGAAACCAGTGGTTATGCCTGTCCTTTCTATCTTTTATTCTTTCTTTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS TCA 90 bp | ACAGGCACTTCTCAAAAGAAGACACCTACGCAGACAACAAACATATaGAAAGAAACTCATCATCACTGGTCATTAAAGAAATGTAAATCA | + |
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Preference number: 5 (lower is better) Translates to: TGTSQKKTPTQTTNI*KETHHHWSLKKCKS Trigger: TGATTTACATTTCTTTAATGACCAGTGATGATGAGTTTCTTTTCATATGTTTGTTGTCTGCGTAGGTGTCTTCTTTTGAGAAGTGCCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS GCA 72 bp | TGGACAGCTGTTTCTGACAGCTCCCTGATTTGCCAGTaGTGTGTTGGCTGCCGGCACAGGAGGCCCGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: WTAVSDSSLICQ*CVGCRHRRPVL Trigger: CAGAACGGGCCTCCTGTGCCGGCAGCCAACACAGCACTGGCAAATCAGGGAGCTGTCAGAAACAGCTGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658901.1 |
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| CDS CCA 72 bp | CACCTGGCTGCTGAAGCTAGAGCCCCAGCTCTCCTTTaGAGCACTCAGGCCACTTCCTTCCCGCTCAAGACA | + |
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Preference number: 6 (lower is better) Translates to: HLAAEARAPALL*STQATSFPLKT Trigger: TGTCTTGAGCGGGAAGGAAGTGGCCTGAGTGCTCCAAAGGAGAGCTGGGGCTCTAGCTTCAGCAGCCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS CAA 72 bp | GGCACCGGGGGATATGCAAATGAACACATGAATCAGTaGTCACCACCACAGACACTGTGCAGGGAGACGATC | + |
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Preference number: 6 (lower is better) Translates to: GTGGYANEHMNQ*SPPQTLCRETI Trigger: GATCGTCTCCCTGCACAGTGTCTGTGGTGGTGACAACTGATTCATGTGTTCATTTGCATATCCCCCGGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658901.1 |
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| CDS CAA 90 bp | TCTGCTGCTGGCACCGGGGGATATGCAAATGAACACATGAATCAGTaGTCACCACCACAGACACTGTGCAGGGAGACGATCAGAATGTGT | + |
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Preference number: 6 (lower is better) Translates to: SAAGTGGYANEHMNQ*SPPQTLCRETIRMC Trigger: ACACATTCTGATCGTCTCCCTGCACAGTGTCTGTGGTGGTGACAACTGATTCATGTGTTCATTTGCATATCCCCCGGTGCCAGCAGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658901.1 |
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| CDS CCA 72 bp | AAGAAACCCTTTCTTCCAGTCCAATTAACCAGCACCTaGCTGCTGAAGCTAGAGCCCCAGCTCTCCTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: KKPFLPVQLTST*LLKLEPQLSFG Trigger: TCCAAAGGAGAGCTGGGGCTCTAGCTTCAGCAGCCAGGTGCTGGTTAATTGGACTGGAAGAAAGGGTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS TCA 72 bp | TTAGTTATCATGGATGATGCGTGCCGTCGGCCACAGTaGCAGATTGTTGCTAGTACTGGTCCTGAGTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LVIMDDACRRPQ*QIVASTGPECD Trigger: GTCACACTCAGGACCAGTACTAGCAACAATCTGTCACTGTGGCCGACGGCACGCATCATCCATGATAACTAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS GCA 72 bp | GAACACATGAATCAGTTGTCACCACCACAGACACTGTaGAGGGAGACGATCAGAATGTGTGGGGAGCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: EHMNQLSPPQTL*RETIRMCGELS Trigger: ACTAAGCTCCCCACACATTCTGATCGTCTCCCTGCACAGTGTCTGTGGTGGTGACAACTGATTCATGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658901.1 |
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| CDS CAA 72 bp | AAACCTTTTCCAACTTCTAGGGGCTGCTTGTGTTCCTaGCCTCCTGGCCATTCTCTCCAAAGACAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: KPFPTSRGCLCS*PPGHSLQRQQH Trigger: ATGCTGCTGTCTTTGGAGAGAATGGCCAGGAGGCAAGGAACACAAGCAGCCCCTAGAAGTTGGAAAAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000558621.2 ENST00000656917.1 ENST00000668613.1 |
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| CDS CAA 72 bp | TCATGGATGATGCGTGCCGTCGGCCACAGTGACAGATaGTTGCTAGTACTGGTCCTGAGTGTGACTAATAAG | + |
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Preference number: 6 (lower is better) Translates to: SWMMRAVGHSDR*LLVLVLSVTNK Trigger: CTTATTAGTCACACTCAGGACCAGTACTAGCAACAATCTGTCACTGTGGCCGACGGCACGCATCATCCATGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS CAA 72 bp | GAATCTTTTCCAACTTCTAGGGGCTGCTTGTGTTCCTaGCCTCCTGGCCATTCTCTCCAAAGACAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ESFPTSRGCLCS*PPGHSLQRQQH Trigger: ATGCTGCTGTCTTTGGAGAGAATGGCCAGGAGGCAAGGAACACAAGCAGCCCCTAGAAGTTGGAAAAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653998.1 |
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| CDS CAA 72 bp | GTTTCTTTTCCAACTTCTAGGGGCTGCTTGTGTTCCTaGCCTCCTGGCCATTCTCTCCAAAGACAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: VSFPTSRGCLCS*PPGHSLQRQQH Trigger: ATGCTGCTGTCTTTGGAGAGAATGGCCAGGAGGCAAGGAACACAAGCAGCCCCTAGAAGTTGGAAAAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000653612.1 ENST00000657749.1 ENST00000658159.1 ENST00000662202.1 |
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| CDS TCA 72 bp | GAACAAAGTAACCAGTTTTCTCCAGCAGGCCAGAAGTaGGTCCCCCGCTCTTTGTGTACACACATGTTGATC | + |
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Preference number: 6 (lower is better) Translates to: EQSNQFSPAGQK*VPRSLCTHMLI Trigger: GATCAACATGTGTGTACACAAAGAGCGGGGGACTCACTTCTGGCCTGCTGGAGAAAACTGGTTACTTTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658446.1 |
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| CDS TCA 72 bp | TCTGTATTCTGCTGCTGGCACCGGGGGATATGCAAATaGACACATGAATCAGTTGTCACCACCACAGACACT | + |
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Preference number: 6 (lower is better) Translates to: SVFCCWHRGICK*THESVVTTTDT Trigger: AGTGTCTGTGGTGGTGACAACTGATTCATGTGTTCATTTGCATATCCCCCGGTGCCAGCAGCAGAATACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658901.1 |
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| CDS TCA 72 bp | ATATCTGGTAGTCTAGGGCTCGTGTGTACTTCCCTTTaGGTTACTGCAGGTGATAGAAACCCTACCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: ISGSLGLVCTSL*VTAGDRNPTSL Trigger: CAGGGAGGTAGGGTTTCTATCACCTGCAGTAACTCAAAGGGAAGTACACACGAGCCCTAGACTACCAGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS GCA 72 bp | CTTATCACTCCTGTTTCTTTTCCAACTTCTAGGGGCTaGTTGTGTTCCTTGCCTCCTGGCCATTCTCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LITPVSFPTSRG*LCSLPPGHSLQ Trigger: TTGGAGAGAATGGCCAGGAGGCAAGGAACACAAGCAGCCCCTAGAAGTTGGAAAAGAAACAGGAGTGATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000653612.1 ENST00000657749.1 ENST00000658159.1 ENST00000662202.1 |
||
| CDS CAA 72 bp | CTCCAAAACCGCCAACTTTGCTTCTTCCACTACCGCTaGGCTCCCTGTAGTCAATCTGCATGTGATTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: LQNRQLCFFHYR*APCSQSACDSY Trigger: ATAGGAATCACATGCAGATTGACTACAGGGAGCCAAGCGGTAGTGGAAGAAGCAAAGTTGGCGGTTTTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000558621.2 ENST00000653612.1 ENST00000653998.1 ENST00000655922.1 ENST00000656917.1 ENST00000657749.1 ENST00000658159.1 ENST00000658446.1 ENST00000658901.1 ENST00000662202.1 ENST00000668613.1 ENST00000671366.1 |
||
| CDS CAA 72 bp | ATCACTCCTGTTTCTTTTCCAACTTCTAGGGGCTGCTaGTGTTCCTTGCCTCCTGGCCATTCTCTCCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ITPVSFPTSRGC*CSLPPGHSLQR Trigger: TCTTTGGAGAGAATGGCCAGGAGGCAAGGAACACAAGCAGCCCCTAGAAGTTGGAAAAGAAACAGGAGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000653612.1 ENST00000657749.1 ENST00000658159.1 ENST00000662202.1 |
||
| CDS CAA 90 bp | ATCACTCCTGTTTCTTTTCCAACTTCTAGGGGCTGCTTGTGTTCCTaGCCTCCTGGCCATTCTCTCCAAAGACAGCAGCATCTTCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: ITPVSFPTSRGCLCS*PPGHSLQRQQHLQI Trigger: GATTTGAAGATGCTGCTGTCTTTGGAGAGAATGGCCAGGAGGCAAGGAACACAAGCAGCCCCTAGAAGTTGGAAAAGAAACAGGAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000653612.1 ENST00000657749.1 ENST00000658159.1 ENST00000662202.1 |
||
| CDS GCA 72 bp | CCACTGGTTTCTGTTGCTTTGTGCTACAGGATGCAGTaGCAAGACAAATCATCAGGTCTTGGGGTGAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: PLVSVALCYRMQ*QDKSSGLGVNV Trigger: AACATTCACCCCAAGACCTGATGATTTGTCTTGGCACTGCATCCTGTAGCACAAAGCAACAGAAACCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558621.2 |
||
| CDS CCA 72 bp | TCCAAAACCGCCAACTTTGCTTCTTCCACTACCGCTTaGCTCCCTGTAGTCAATCTGCATGTGATTCCTATT | + |
|
Preference number: 6 (lower is better) Translates to: SKTANFASSTTA*LPVVNLHVIPI Trigger: AATAGGAATCACATGCAGATTGACTACAGGGAGCCAAGCGGTAGTGGAAGAAGCAAAGTTGGCGGTTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000558621.2 ENST00000653612.1 ENST00000653998.1 ENST00000655922.1 ENST00000656917.1 ENST00000657749.1 ENST00000658159.1 ENST00000658446.1 ENST00000658901.1 ENST00000662202.1 ENST00000668613.1 ENST00000671366.1 |
||
| CDS CCA 72 bp | AGTCAGTTCACAAGCTTTAGCCACATTGATCAAAGATaGCCAGGTTCCACTCAGCAGAAGGGTCCTCTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SQFTSFSHIDQR*PGSTQQKGPLN Trigger: GTTAAGAGGACCCTTCTGCTGAGTGGAACCTGGCCATCTTTGATCAATGTGGCTAAAGCTTGTGAACTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558621.2 |
||
| CDS CAA 72 bp | GCCAATCACCAACAGAAACCCCAGTTCCACTTTGCCTaGAGAATCCAACATGACATTGTCTACTGTGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ANHQQKPQFHFA*RIQHDIVYCGF Trigger: GAACCCACAGTAGACAATGTCATGTTGGATTCTCAAGGCAAAGTGGAACTGGGGTTTCTGTTGGTGATTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658901.1 |
||
| CDS TCA 72 bp | GAAACCCCAGTTCCACTTTGCCTTGAGAATCCAACATaGCATTGTCTACTGTGGGTTCCATACATCAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ETPVPLCLENPT*HCLLWVPYISG Trigger: ACCACTGATGTATGGAACCCACAGTAGACAATGTCATGTTGGATTCTCAAGGCAAAGTGGAACTGGGGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658901.1 |
||
| CDS CCA 72 bp | GTACTAGCATTGGCGTTGTACATCATGATCACCTTATaGGGGTTGCTTATGCTAGTAGGATCTGATTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VLALALYIMITL*GLLMLVGSDWL Trigger: GAGCCAATCAGATCCTACTAGCATAAGCAACCCCCATAAGGTGATCATGATGTACAACGCCAATGCTAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558621.2 |
||
| CDS CCA 72 bp | AGGCTCACTCCCGAGAGTCAAAGGCTGCGTATTGTATaGATGCAGAGGATAAAAGTTCAAAGTTTCCAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RLTPESQRLRIV*MQRIKVQSFQL Trigger: TAGCTGGAAACTTTGAACTTTTATCCTCTGCATCCATACAATACGCAGCCTTTGACTCTCGGGAGTGAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669932.1 |
||
| CDS CAA 72 bp | GCATTGGCGTTGTACATCATGATCACCTTATGGGGGTaGCTTATGCTAGTAGGATCTGATTGGCTCACACTA | + |
|
Preference number: 6 (lower is better) Translates to: ALALYIMITLWG*LMLVGSDWLTL Trigger: TAGTGTGAGCCAATCAGATCCTACTAGCATAAGCAACCCCCATAAGGTGATCATGATGTACAACGCCAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558621.2 |
||
| CDS TCA 72 bp | TCATTCGTCTCAATGGCCTTAACTTACCGACATCTGTaGAGTCCCTTTTGCAATGTGGGACAACCTGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SFVSMALTYRHL*SPFCNVGQPVH Trigger: ATGAACAGGTTGTCCCACATTGCAAAAGGGACTTCACAGATGTCGGTAAGTTAAGGCCATTGAGACGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000558621.2 ENST00000653998.1 ENST00000658159.1 ENST00000662202.1 |
||
| CDS TCA 72 bp | TCTCTCCAAAGACAGCAGCATCTTCAAATCTGTCTTTaGTTCCGCTTCCATTATCGCATCTTCTCTAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLQRQQHLQICL*FRFHYRIFSSS Trigger: CGAGCTAGAGAAGATGCGATAATGGAAGCGGAATCAAAGACAGATTTGAAGATGCTGCTGTCTTTGGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653612.1 ENST00000668613.1 |
||
| CDS TCA 72 bp | TCCATTATCGCATCTTCTCTAGCTCTTCGACATCTGTaGAGTCCCTTTTGCAATGTGGGACAACCTGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SIIASSLALRHL*SPFCNVGQPVH Trigger: ATGAACAGGTTGTCCCACATTGCAAAAGGGACTTCACAGATGTCGAAGAGCTAGAGAAGATGCGATAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656917.1 ENST00000657749.1 |
||
| CDS CCA 72 bp | TACATGGAGGTTAGTCATTGCTTTGGTCTAAAAAGGTaGGGTATCTTGAAGCGGAGGCTTACAGGTCATAAG | + |
|
Preference number: 6 (lower is better) Translates to: YMEVSHCFGLKR*GILKRRLTGHK Trigger: CTTATGACCTGTAAGCCTCCGCTTCAAGATACCCCACCTTTTTAGACCAAAGCAATGACTAACCTCCATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000653612.1 ENST00000653998.1 ENST00000655922.1 ENST00000657749.1 ENST00000658159.1 ENST00000662202.1 |
||
| CDS CCA 72 bp | GTTTCCCTCAGGTTCATCTTTCCGAGGCAGTTTATATaGAGCAACCTCTTAGCATTAGGAATCATTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VSLRFIFPRQFI*SNLLALGIIPG Trigger: ACCTGGAATGATTCCTAATGCTAAGAGGTTGCTCCATATAAACTGCCTCGGAAAGATGAACCTGAGGGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658446.1 |
||
| CDS CCA 72 bp | CATGGTTGGTGGAGGTGTAAATTAGTTTGGCCATTGTaGAAGACAGTGAGGCAATTCCTCAAGGATCTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HGWWRCKLVWPL*KTVRQFLKDLE Trigger: TTCTAGATCCTTGAGGAATTGCCTCACTGTCTTCCACAATGGCCAAACTAATTTACACCTCCACCAACCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671366.1 |
||
| CDS CAA 72 bp | TTCAAAGGAGATCTTACAATCTCATCAGTTACCCTCTaGTACAGTTGCAGATGGGGCCATGTACACATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FKGDLTISSVTL*YSCRWGHVHMW Trigger: CCACATGTGTACATGGCCCCATCTGCAACTGTACAAGAGGGTAACTGATGAGATTGTAAGATCTCCTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658446.1 |
||
| CDS CAA 90 bp | CTCTTGGGTCACCTTGGACAAAATGCACTTTTCCTACACCAAACATaGGGTAAATTGTCAGTAAATTCAAGTCATGCAGGCACAGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLGHLGQNALFLHQT*GKLSVNSSHAGTEV Trigger: CACCTCTGTGCCTGCATGACTTGAATTTACTGACAATTTACCCAATGTTTGGTGTAGGAAAAGTGCATTTTGTCCAAGGTGACCCAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669932.1 |
||
| CDS TCA 72 bp | TCTCTCCAAAGACAGCAGCATCTTCAAATCTGTCTTTaGTTCCGCTTCCATTATCGCATCTTCTCTAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLQRQQHLQICL*FRFHYRIFSSS Trigger: AGAGCTAGAGAAGATGCGATAATGGAAGCGGAATCAAAGACAGATTTGAAGATGCTGCTGTCTTTGGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000558621.2 ENST00000653998.1 ENST00000656917.1 ENST00000657749.1 ENST00000658159.1 ENST00000662202.1 |
||
| CDS TCA 72 bp | GATCACCTTATGGGGGTTGCTTATGCTAGTAGGATCTaGTTGGCTCACACTAATTCTATTCCCTGTCTATGT | + |
|
Preference number: 6 (lower is better) Translates to: DHLMGVAYASRI*LAHTNSIPCLC Trigger: ACATAGACAGGGAATAGAATTAGTGTGAGCCAATCAGATCCTACTAGCATAAGCAACCCCCATAAGGTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558621.2 |
||
| CDS GCA 72 bp | ACTTTGTGGCATTCATTAGATTTCAGTTCAGGAAAGTaGAATCTGTTCCTCGCCAATCACCAACAGAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: TLWHSLDFSSGK*NLFLANHQQKP Trigger: GGGTTTCTGTTGGTGATTGGCGAGGAACAGATTGCACTTTCCTGAACTGAAATCTAATGAATGCCACAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658901.1 |
||
| CDS CCA 72 bp | TTCTCAGTGGCTTGCAAGCAAGGGTCTTTAAAGGTATaGGTAACTTTCAAGAAGGCAGAAGTTACAGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: FSVACKQGSLKV*VTFKKAEVTGK Trigger: TTTGCCTGTAACTTCTGCCTTCTTGAAAGTTACCCATACCTTTAAAGACCCTTGCTTGCAAGCCACTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653612.1 ENST00000653998.1 ENST00000655922.1 ENST00000657749.1 ENST00000658159.1 ENST00000662202.1 |
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| CDS CCA 72 bp | CACTTGAACCTGCTGTTATCATTTAAACAGCAGCAGTaGGAAATCGTGCACATTCAAAGCAACACTGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: HLNLLLSFKQQQ*EIVHIQSNTAF Trigger: GAATGCAGTGTTGCTTTGAATGTGCACGATTTCCCACTGCTGCTGTTTAAATGATAACAGCAGGTTCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669932.1 |
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| CDS CCA 72 bp | ACACTTTTACATGGTTGGTGGAGGTGTAAATTAGTTTaGCCATTGTGGAAGACAGTGAGGCAATTCCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TLLHGWWRCKLV*PLWKTVRQFLK Trigger: CTTGAGGAATTGCCTCACTGTCTTCCACAATGGCCAAACTAATTTACACCTCCACCAACCATGTAAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS CAA 72 bp | TCTTCTCTAGCTCTTCTAGGGAAACTTTTGATCACATaGGGCCCAACAGACAATCCAGAATCATTCGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLALLGKLLIT*GPTDNPESFVS Trigger: TGAGACGAATGATTCTGGATTGTCTGTTGGGCCCAATGTGATCAAAAGTTTCCCTAGAAGAGCTAGAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000558621.2 ENST00000653998.1 ENST00000658159.1 ENST00000662202.1 |
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| CDS CAA 72 bp | GTGTCTGAGTATCATAAGCCATCATACAGAGAGTGTTaGCCTGCAAGTAAAGTTGTCCCTTCAAAGGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: VSEYHKPSYREC*PASKVVPSKEI Trigger: GATCTCCTTTGAAGGGACAACTTTACTTGCAGGCAAACACTCTCTGTATGATGGCTTATGATACTCAGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658446.1 |
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| CDS CAA 72 bp | TGCATGTGTCTTTCTAGCAGCATGATTTATAGTCCTTaGGGTATATACCCAGTAATGGGATGGCTGGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CMCLSSSMIYSP*GIYPVMGWLGQ Trigger: TTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTAGAAAGACACATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658446.1 |
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| CDS CAA 72 bp | TTACATGGTTGGTGGAGGTGTAAATTAGTTTGGCCATaGTGGAAGACAGTGAGGCAATTCCTCAAGGATCTA | + |
|
Preference number: 6 (lower is better) Translates to: LHGWWRCKLVWP*WKTVRQFLKDL Trigger: TAGATCCTTGAGGAATTGCCTCACTGTCTTCCACAATGGCCAAACTAATTTACACCTCCACCAACCATGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS CAA 90 bp | GAAAGAATAAAAGATAGAAAGGACAGGCATAACCACTGGTTTCTGTaGCTTTGTGCTACAGGATGCAGTGCCAAGACAAATCATCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ERIKDRKDRHNHWFL*LCATGCSAKTNHQV Trigger: GACCTGATGATTTGTCTTGGCACTGCATCCTGTAGCACAAAGCAACAGAAACCAGTGGTTATGCCTGTCCTTTCTATCTTTTATTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558621.2 |
||
| CDS CAA 90 bp | AGAGTACTAGCATTGGCGTTGTACATCATGATCACCTTATGGGGGTaGCTTATGCTAGTAGGATCTGATTGGCTCACACTAATTCTATTC | + |
|
Preference number: 6 (lower is better) Translates to: RVLALALYIMITLWG*LMLVGSDWLTLILF Trigger: GAATAGAATTAGTGTGAGCCAATCAGATCCTACTAGCATAAGCAACCCCCATAAGGTGATCATGATGTACAACGCCAATGCTAGTACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS TCA 72 bp | TGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTaGGGAATTGCCACACTAACTTTCACAATGGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: WLGQMVFLVLDP*GIATLTFTMVE Trigger: TTCAACCATTGTGAAAGTTAGTGTGGCAATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658446.1 |
||
| CDS TCA 72 bp | CTAGAAACAATCATCTTGAAATCATCTACTCTTTCATaGTCTCACAGGGAAGACCCCAAGGCCAGATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LETIILKSSTLS*SHREDPKARFP Trigger: AGGAAATCTGGCCTTGGGGTCTTCCCTGTGAGATCATGAAAGAGTAGATGATTTCAAGATGATTGTTTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669932.1 |
||
| CDS GCA 72 bp | TGTCTGAGTATCATAAGCCATCATACAGAGAGTGTTTaGCTGCAAGTAAAGTTGTCCCTTCAAAGGAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: CLSIISHHTESV*LQVKLSLQRRS Trigger: AGATCTCCTTTGAAGGGACAACTTTACTTGCAGGCAAACACTCTCTGTATGATGGCTTATGATACTCAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658446.1 |
||
| CDS CAA 72 bp | GATTGCAATAAATTATTGCACCCAAGAGTACTAGCATaGGCGTTGTACATCATGATCACCTTATGGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DCNKLLHPRVLA*ALYIMITLWGL Trigger: CAACCCCCATAAGGTGATCATGATGTACAACGCCAATGCTAGTACTCTTGGGTGCAATAATTTATTGCAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558621.2 |
||
| CDS CAA 72 bp | AAATTCTACCACCTAGCATTTTCAAACAGCTCCTGGTaGTTTCCACAAACTCCGTTAATGGACAGCTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KFYHLAFSNSSW*FPQTPLMDSCF Trigger: GAAACAGCTGTCCATTAACGGAGTTTGTGGAAACAACCAGGAGCTGTTTGAAAATGCTAGGTGGTAGAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653998.1 ENST00000658901.1 ENST00000668613.1 |
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| CDS CAA 72 bp | AGATCTTACAATCTCATCAGTTACCCTCTTGTACAGTaGCAGATGGGGCCATGTACACATGTGGATTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSYNLISYPLVQ*QMGPCTHVDLR Trigger: TCTTAAATCCACATGTGTACATGGCCCCATCTGCAACTGTACAAGAGGGTAACTGATGAGATTGTAAGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658446.1 |
||
| CDS CAA 72 bp | ACCTACATAAACGTATTTTGCTACTTTGGTGGATTATaGAGATACACCAACCAAGCAGGGAGGGTGACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TYINVFCYFGGL*RYTNQAGRVTR Trigger: TCTAGTCACCCTCCCTGCTTGGTTGGTGTATCTCAATAATCCACCAAAGTAGCAAAATACGTTTATGTAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658446.1 |
||
| CDS CAA 72 bp | TTCATTACAAGATTACTCAAATCTACAGTCGTGTTCTaGAGCATGAGTTATCTGGTGGCACAGGCCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FITRLLKSTVVF*SMSYLVAQAFS Trigger: TGAGAAGGCCTGTGCCACCAGATAACTCATGCTCAAGAACACGACTGTAGATTTGAGTAATCTTGTAATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671366.1 |
||
| CDS CAA 90 bp | CTTCAAAGGAGATCTTACAATCTCATCAGTTACCCTCTTGTACAGTaGCAGATGGGGCCATGTACACATGTGGATTTAAGAAAATGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LQRRSYNLISYPLVQ*QMGPCTHVDLRKCC Trigger: GCAACATTTTCTTAAATCCACATGTGTACATGGCCCCATCTGCAACTGTACAAGAGGGTAACTGATGAGATTGTAAGATCTCCTTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658446.1 |
||
| CDS CAA 90 bp | CACCTTGGACAAAATGCACTTTTCCTACACCAAACATTGGGTAAATaGTCAGTAAATTCAAGTCATGCAGGCACAGAGGTGAAGAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLGQNALFLHQTLGK*SVNSSHAGTEVKNP Trigger: AGGATTCTTCACCTCTGTGCCTGCATGACTTGAATTTACTGACAATTTACCCAATGTTTGGTGTAGGAAAAGTGCATTTTGTCCAAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669932.1 |
||
| CDS CAA 90 bp | TATGATTGCAATAAATTATTGCACCCAAGAGTACTAGCATTGGCGTaGTACATCATGATCACCTTATGGGGGTTGCTTATGCTAGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YDCNKLLHPRVLALA*YIMITLWGLLMLVG Trigger: TCCTACTAGCATAAGCAACCCCCATAAGGTGATCATGATGTACAACGCCAATGCTAGTACTCTTGGGTGCAATAATTTATTGCAATCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558621.2 |
||
| CDS CAA 90 bp | AGTATCATAAGCCATCATACAGAGAGTGTTTGCCTGCAAGTAAAGTaGTCCCTTCAAAGGAGATCTTACAATCTCATCAGTTACCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SIISHHTESVCLQVK*SLQRRSYNLISYPL Trigger: AAGAGGGTAACTGATGAGATTGTAAGATCTCCTTTGAAGGGACAACTTTACTTGCAGGCAAACACTCTCTGTATGATGGCTTATGATACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658446.1 |
||
| CDS CAA 90 bp | TTAGTGACTGTGTCTGAGTATCATAAGCCATCATACAGAGAGTGTTaGCCTGCAAGTAAAGTTGTCCCTTCAAAGGAGATCTTACAATCT | + |
|
Preference number: 6 (lower is better) Translates to: LVTVSEYHKPSYREC*PASKVVPSKEILQS Trigger: AGATTGTAAGATCTCCTTTGAAGGGACAACTTTACTTGCAGGCAAACACTCTCTGTATGATGGCTTATGATACTCAGACACAGTCACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658446.1 |
||
| CDS TCA 72 bp | ATTCAGATAGAAACCGAAATCCCCAATCCACTCTATTaGCTCACTGACATTATCACAAAGGGAGTGTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: IQIETEIPNPLY*LTDIITKGVCD Trigger: ATCACACACTCCCTTTGTGATAATGTCAGTGAGTCAATAGAGTGGATTGGGGATTTCGGTTTCTATCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558621.2 |
||
| CDS CCA 72 bp | ATTAAATTCTACCACCTAGCATTTTCAAACAGCTCCTaGTTGTTTCCACAAACTCCGTTAATGGACAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IKFYHLAFSNSS*LFPQTPLMDSC Trigger: ACAGCTGTCCATTAACGGAGTTTGTGGAAACAACCAGGAGCTGTTTGAAAATGCTAGGTGGTAGAATTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653998.1 ENST00000658901.1 ENST00000668613.1 |
||
| CDS CAA 72 bp | AATAAATTATTGCACCCAAGAGTACTAGCATTGGCGTaGTACATCATGATCACCTTATGGGGGTTGCTTATG | + |
|
Preference number: 6 (lower is better) Translates to: NKLLHPRVLALA*YIMITLWGLLM Trigger: CATAAGCAACCCCCATAAGGTGATCATGATGTACAACGCCAATGCTAGTACTCTTGGGTGCAATAATTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558621.2 |
||
| CDS CAA 72 bp | CACCTTGGACAAAATGCACTTTTCCTACACCAAACATaGGGTAAATTGTCAGTAAATTCAAGTCATGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HLGQNALFLHQT*GKLSVNSSHAG Trigger: GCCTGCATGACTTGAATTTACTGACAATTTACCCAATGTTTGGTGTAGGAAAAGTGCATTTTGTCCAAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669932.1 |
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| CDS TCA 72 bp | TATCACTCCTGTTTCTGCATTCTTTCCATACTAATATaGACCATCAGCACCTCAAGGATGAAATCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: YHSCFCILSILI*TISTSRMKSSA Trigger: TGCTGATGATTTCATCCTTGAGGTGCTGATGGTTCATATTAGTATGGAAAGAATGCAGAAACAGGAGTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653998.1 |
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| CDS TCA 72 bp | AAAGATCAGATAGTTTTAGATACGCAGCGCTATTTCTaGGGCCTCTGTTCTCTTCCATTGATCTATATCTCT | + |
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Preference number: 6 (lower is better) Translates to: KDQIVLDTQRYF*GLCSLPLIYIS Trigger: AGAGATATAGATCAATGGAAGAGAACAGAGGCCTCAGAAATAGCGCTGCGTATCTAAAACTATCTGATCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656917.1 ENST00000658446.1 ENST00000658901.1 ENST00000668613.1 |
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| CDS TCA 72 bp | TATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTaGCTTTTTAATGATTACCATTCTAACTGGTATGAG | + |
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Preference number: 6 (lower is better) Translates to: YFSTSSPAPVVS*LFNDYHSNWYE Trigger: CTCATACCAGTTAGAATGGTAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658446.1 |
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| CDS CAA 90 bp | ACATTTTATGATTGCAATAAATTATTGCACCCAAGAGTACTAGCATaGGCGTTGTACATCATGATCACCTTATGGGGGTTGCTTATGCTA | + |
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Preference number: 6 (lower is better) Translates to: TFYDCNKLLHPRVLA*ALYIMITLWGLLML Trigger: TAGCATAAGCAACCCCCATAAGGTGATCATGATGTACAACGCCAATGCTAGTACTCTTGGGTGCAATAATTTATTGCAATCATAAAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558621.2 |
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| CDS TCA 72 bp | CACTGGTCATTAAAGAAATGTAAATCAAAACCGCAATaGGATACCATCTCACACCAGTCAGAATGGCAATTA | + |
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Preference number: 6 (lower is better) Translates to: HWSLKKCKSKPQ*DTISHQSEWQL Trigger: TAATTGCCATTCTGACTGGTGTGAGATGGTATCTCATTGCGGTTTTGATTTACATTTCTTTAATGACCAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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| CDS CCA 72 bp | ACACTTACATTTAAGGGAGCATATCGTAGTGCAAATTaGGTCATCGCAGGAAATATAAAAGCATTATTCCTC | + |
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Preference number: 6 (lower is better) Translates to: TLTFKGAYRSAN*VIAGNIKALFL Trigger: GAGGAATAATGCTTTTATATTTCCTGCGATGACCCAATTTGCACTACGATATGCTCCCTTAAATGTAAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671366.1 |
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