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Pregenerated sensors for LINC02252 (Homo sapiens)

Ensembl gene IDs: ENSG00000261304

Ensembl transcript IDs: ENST00000565706.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TCAGAAGTTACTGGCTGTCTACTTACTGCCATGGCTGCTCCCAGCTaGGCACCCACACACTCAGCCATTCCAGCCCAGTCTCCATATACA +
Preference number: 5 (lower is better)
Translates to: SEVTGCLLTAMAAPS*APTHSAIPAQSPYT
Trigger: TGTATATGGAGACTGGGCTGGAATGGCTGAGTGTGTGGGTGCGCAGCTGGGAGCAGCCATGGCAGTAAGTAGACAGCCAGTAACTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS CCA 90 bp TGCCCTAGTATTTTCCCGATAACCTCGGCCAATAATTGGTTCTTATaGCCCATTCCAAGACACATTGTTGCTATGGCCCTTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: CPSIFPITSANNWFL*PIPRHIVAMALLPT
Trigger: TGTGGGAAGAAGGGCCATAGCAACAATGTGTCTTGGAATGGGCCATAAGAACCAATTATTGGCCGAGGTTATCGGGAAAATACTAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS CCA 90 bp CACAACATATGCCCTAGTATTTTCCCGATAACCTCGGCCAATAATTaGTTCTTATGGCCCATTCCAAGACACATTGTTGCTATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: HNICPSIFPITSANN*FLWPIPRHIVAMAL
Trigger: AAGGGCCATAGCAACAATGTGTCTTGGAATGGGCCATAAGAACCAATTATTGGCCGAGGTTATCGGGAAAATACTAGGGCATATGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS TCA 90 bp TTCGCCTGCTCCTCTGCAACTTCTTTCCAACATCATTTTGTAGGTTaGGCTATTCTGTTTTTGGAAACCTTGCTCTTCAGCATAGCAGTC +
Preference number: 5 (lower is better)
Translates to: FACSSATSFQHHFVG*AILFLETLLFSIAV
Trigger: GACTGCTATGCTGAAGAGCAAGGTTTCCAAAAACAGAATAGCTCAACCTACAAAATGATGTTGGAAAGAAGTTGCAGAGGAGCAGGCGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS GCA 72 bp ATCAGAAGTTACTGGCTGTCTACTTACTGCCATGGCTaGTCCCAGCTGCGCACCCACACACTCAGCCATTCC +
Preference number: 6 (lower is better)
Translates to: IRSYWLSTYCHG*SQLRTHTLSHS
Trigger: GGAATGGCTGAGTGTGTGGGTGCGCAGCTGGGAGCAGCCATGGCAGTAAGTAGACAGCCAGTAACTTCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS CCA 72 bp CAGTCAGGGCAGCATCAGGTATGCAGGTGTCTCCTCTaGGTGCATCCTATAAGCTACTCCTCTTTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: QSGQHQVCRCLL*VHPISYSSFLE
Trigger: TTCCAGGAAAGAGGAGTAGCTTATAGGATGCACCCAGAGGAGACACCTGCATACCTGATGCTGCCCTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS CCA 72 bp ATTTTCCCGATAACCTCGGCCAATAATTGGTTCTTATaGCCCATTCCAAGACACATTGTTGCTATGGCCCTT +
Preference number: 6 (lower is better)
Translates to: IFPITSANNWFL*PIPRHIVAMAL
Trigger: AAGGGCCATAGCAACAATGTGTCTTGGAATGGGCCATAAGAACCAATTATTGGCCGAGGTTATCGGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS CCA 72 bp TGCCCTAGTATTTTCCCGATAACCTCGGCCAATAATTaGTTCTTATGGCCCATTCCAAGACACATTGTTGCT +
Preference number: 6 (lower is better)
Translates to: CPSIFPITSANN*FLWPIPRHIVA
Trigger: AGCAACAATGTGTCTTGGAATGGGCCATAAGAACCAATTATTGGCCGAGGTTATCGGGAAAATACTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS CAA 90 bp CTTCGCCTGCTCCTCTGCAACTTCTTTCCAACATCATTTTGTAGGTaGAGCTATTCTGTTTTTGGAAACCTTGCTCTTCAGCATAGCAGT +
Preference number: 6 (lower is better)
Translates to: LRLLLCNFFPTSFCR*SYSVFGNLALQHSS
Trigger: ACTGCTATGCTGAAGAGCAAGGTTTCCAAAAACAGAATAGCTCAACCTACAAAATGATGTTGGAAAGAAGTTGCAGAGGAGCAGGCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS CAA 72 bp CCAATAATTGGTTCTTATGGCCCATTCCAAGACACATaGTTGCTATGGCCCTTCTTCCCACATCTATTTCTC +
Preference number: 6 (lower is better)
Translates to: PIIGSYGPFQDT*LLWPFFPHLFL
Trigger: GAGAAATAGATGTGGGAAGAAGGGCCATAGCAACAATGTGTCTTGGAATGGGCCATAAGAACCAATTATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS CAA 72 bp CTCCTCTGCAACTTCTTTCCAACATCATTTTGTAGGTaGAGCTATTCTGTTTTTGGAAACCTTGCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LLCNFFPTSFCR*SYSVFGNLALQ
Trigger: CTGAAGAGCAAGGTTTCCAAAAACAGAATAGCTCAACCTACAAAATGATGTTGGAAAGAAGTTGCAGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565706.2
CDS CCA 72 bp TTAATTATTGAAGAGTTGCCAGTTATTGTTTTGAGCTaGAGTCTTAGGATTATGATTGGGGATATTCCTAGA +
Preference number: 6 (lower is better)
Translates to: LIIEELPVIVLS*SLRIMIGDIPR
Trigger: TCTAGGAATATCCCCAATCATAATCCTAAGACTCCAGCTCAAAACAATAACTGGCAACTCTTCAATAATTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565706.2