Pregenerated sensors for LINC02251 (Homo sapiens)
Ensembl gene IDs: ENSG00000258483Ensembl transcript IDs: ENST00000554798.2, ENST00000649950.1, ENST00000657981.1, ENST00000660238.1, ENST00000661284.1, ENST00000661923.1, ENST00000663386.1, ENST00000671500.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTGAGGGTGAGAGCAAGTCAGTGACCTGCCTTCATGGAAGGGTCTaGATCAGACGTCAGACACGAGTGCTGCTGTCACCACAACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AEGESKSVTCLHGRV*IRRQTRVLLSPQPR Trigger: CCTGGGTTGTGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGGCAGGTCACTGACTTGCTCTCACCCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000554798.2 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 |
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| CDS GCA 90 bp | TGGTCCCTGGTCATTGATAGATGGTTTCCTCTTGCCCTGTTTGTATaGTCTGCGGTCTCCTGTGCCTTGTTGCCATCCAGGGCATGGGGG | + |
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Preference number: 5 (lower is better) Translates to: WSLVIDRWFPLALFV*SAVSCALLPSRAWG Trigger: CCCCCATGCCCTGGATGGCAACAAGGCACAGGAGACCGCAGAGCATACAAACAGGGCAAGAGGAAACCATCTATCAATGACCAGGGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS TCA 90 bp | TCTTACAGTGTTCAATTCATATGGATGAAGGGTTATCTGGGCCCATaGGGGGCTGTCTGCCTGGCCGTGGGTCAGGGTCCCCTGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SYSVQFIWMKGYLGP*GAVCLAVGQGPLSL Trigger: AAGACTCAGGGGACCCTGACCCACGGCCAGGCAGACAGCCCCTCATGGGCCCAGATAACCCTTCATCCATATGAATTGAACACTGTAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 |
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| CDS CCA 90 bp | GTACCGCTCCAGGAATGTGGGGTGTCATTTTTCAAGGCCACTTCATaGAAGGGTCTGCATCAGACGTCAGACACGAGTGCTGCTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: VPLQECGVSFFKATS*KGLHQTSDTSAAVT Trigger: GGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGTGGCCTTGAAAAATGACACCCCACATTCCTGGAGCGGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649950.1 |
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| CDS GCA 90 bp | AGGAATGTGGGGTGTCATTTTTCAAGGCCACTTCATGGAAGGGTCTaGATCAGACGTCAGACACGAGTGCTGCTGTCACCACAACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RNVGCHFSRPLHGRV*IRRQTRVLLSPQPR Trigger: CCTGGGTTGTGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGTGGCCTTGAAAAATGACACCCCACATTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649950.1 |
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| CDS TCA 90 bp | GAGGAAGCTTCAGAGGGGAGGCTGTGCTTCCTCTGGGTGTCAGCCTaGTTCAGTGAGAAGGAAAGGTTAATAGCACCTGCTAAGCCCTTA | + |
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Preference number: 5 (lower is better) Translates to: EEASEGRLCFLWVSA*FSEKERLIAPAKPL Trigger: TAAGGGCTTAGCAGGTGCTATTAACCTTTCCTTCTCACTGAATCAGGCTGACACCCAGAGGAAGCACAGCCTCCCCTCTGAAGCTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 |
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| CDS GCA 90 bp | GAGTGCTCTGGGCCTTGGGAGAACGTGAGCGAGATGTTAGAACTTTaGTTCCTCTGGTCCCTGGTCATTGATAGATGGTTTCCTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: ECSGPWENVSEMLEL*FLWSLVIDRWFPLA Trigger: GGCAAGAGGAAACCATCTATCAATGACCAGGGACCAGAGGAAGCAAAGTTCTAACATCTCGCTCACGTTCTCCCAAGGCCCAGAGCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649950.1 ENST00000657981.1 ENST00000663386.1 |
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| CDS GCA 90 bp | CAAGGCCACTTCATGGAAGGGTCTGCATCAGACGTCAGACACGAGTaGTGCTGTCACCACAACCCAGGTTTTACTTTGCCTGGTATCATC | + |
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Preference number: 5 (lower is better) Translates to: QGHFMEGSASDVRHE*CCHHNPGFTLPGII Trigger: GATGATACCAGGCAAAGTAAAACCTGGGTTGTGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGTGGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649950.1 |
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| CDS GCA 90 bp | CCTGCCTTCATGGAAGGGTCTGCATCAGACGTCAGACACGAGTGCTaGTGTCACCACAACCCAGGTTTTACTTTGCCTGGTATCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: PAFMEGSASDVRHEC*CHHNPGFTLPGIIS Trigger: AGAGATGATACCAGGCAAAGTAAAACCTGGGTTGTGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 |
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| CDS GCA 90 bp | GTGTCAGCCTTCATGGAAGGGTCTGCATCAGACGTCAGACACGAGTaGTGCTGTCACCACAACCCAGGTTTTACTTTGCCTGGTATCATC | + |
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Preference number: 5 (lower is better) Translates to: VSAFMEGSASDVRHE*CCHHNPGFTLPGII Trigger: GATGATACCAGGCAAAGTAAAACCTGGGTTGTGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGGCTGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663386.1 ENST00000671500.1 |
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| CDS CCA 90 bp | CTTCATTCTGCTCACTCTGGTGGCTCCAGTACCGCTCCAGGAATGTaGGGTGTCATTTTTCAAGGCCACTTCATGGAAGGGTCTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: LHSAHSGGSSTAPGM*GVIFQGHFMEGSAS Trigger: TGATGCAGACCCTTCCATGAAGTGGCCTTGAAAAATGACACCCCACATTCCTGGAGCGGTACTGGAGCCACCAGAGTGAGCAGAATGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649950.1 |
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| CDS GCA 90 bp | TTGACCTCTGGGCCTTGGGAGAACGTGAGCGAGATGTTAGAACTTTaGTTCCTCTGGTCCCTGGTCATTGATAGATGGTTTCCTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: LTSGPWENVSEMLEL*FLWSLVIDRWFPLA Trigger: GGCAAGAGGAAACCATCTATCAATGACCAGGGACCAGAGGAAGCAAAGTTCTAACATCTCGCTCACGTTCTCCCAAGGCCCAGAGGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554798.2 |
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| CDS GCA 90 bp | CCTGCCTTCATGGAAGGGTCTGCATCAGACGTCAGACACGAGTGCTaGTGTCACCACAACCCAGGTTTTACTTTGCCTGGTATCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: PAFMEGSASDVRHEC*CHHNPGFTLPGIIF Trigger: AAAGATGATACCAGGCAAAGTAAAACCTGGGTTGTGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554798.2 ENST00000657981.1 |
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| CDS GCA 90 bp | GGCCACTTCATGGAAGGGTCTGCATCAGACGTCAGACACGAGTGCTaGTGTCACCACAACCCAGGTTTTACTTTGCCTGGTATCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: GHFMEGSASDVRHEC*CHHNPGFTLPGIIF Trigger: AAAGATGATACCAGGCAAAGTAAAACCTGGGTTGTGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649950.1 |
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| CDS GCA 90 bp | TCAGCCTTCATGGAAGGGTCTGCATCAGACGTCAGACACGAGTGCTaGTGTCACCACAACCCAGGTTTTACTTTGCCTGGTATCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: SAFMEGSASDVRHEC*CHHNPGFTLPGIIS Trigger: AGAGATGATACCAGGCAAAGTAAAACCTGGGTTGTGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671500.1 |
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| CDS GCA 90 bp | ATCATCTCTGGGCCTTGGGAGAACGTGAGCGAGATGTTAGAACTTTaGTTCCTCTGGTCCCTGGTCATTGATAGATGGTTTCCTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: IISGPWENVSEMLEL*FLWSLVIDRWFPLA Trigger: GGCAAGAGGAAACCATCTATCAATGACCAGGGACCAGAGGAAGCAAAGTTCTAACATCTCGCTCACGTTCTCCCAAGGCCCAGAGATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000671500.1 |
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| CDS GCA 90 bp | TCAGCCTTCATGGAAGGGTCTGCATCAGACGTCAGACACGAGTGCTaGTGTCACCACAACCCAGGTTTTACTTTGCCTGGTATCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: SAFMEGSASDVRHEC*CHHNPGFTLPGIIF Trigger: AAAGATGATACCAGGCAAAGTAAAACCTGGGTTGTGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663386.1 |
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| CDS CCA 90 bp | GAGATGTTAGAACTTTGCTTCCTCTGGTCCCTGGTCATTGATAGATaGTTTCCTCTTGCCCTGTTTGTATGCTCTGCGGTCTCCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: EMLELCFLWSLVIDR*FPLALFVCSAVSCA Trigger: GGCACAGGAGACCGCAGAGCATACAAACAGGGCAAGAGGAAACCATCTATCAATGACCAGGGACCAGAGGAAGCAAAGTTCTAACATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS CCA 90 bp | GGGCCTTGGGAGAACGTGAGCGAGATGTTAGAACTTTGCTTCCTCTaGTCCCTGGTCATTGATAGATGGTTTCCTCTTGCCCTGTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: GPWENVSEMLELCFL*SLVIDRWFPLALFV Trigger: TACAAACAGGGCAAGAGGAAACCATCTATCAATGACCAGGGACCAGAGGAAGCAAAGTTCTAACATCTCGCTCACGTTCTCCCAAGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS TCA 90 bp | AAGGTTTTGTTAAGTCGAGCCGTTTCTGCTGTGCCAGTTTTATGGTaGGGTGTCCAGCTTTCCCTCCAATCACACTTCCCATTGGTATGT | + |
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Preference number: 5 (lower is better) Translates to: KVLLSRAVSAVPVLW*GVQLSLQSHFPLVC Trigger: ACATACCAATGGGAAGTGTGATTGGAGGGAAAGCTGGACACCTCACCATAAAACTGGCACAGCAGAAACGGCTCGACTTAACAAAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000554798.2 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS GCA 90 bp | CATAAAGATGCAGCACTGTGCCCACTGCCCAGAAGAGTGAACAAATaGTTGTTTCTCAGTAAACTTTATGGCATAAAGCAGAGGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: HKDAALCPLPRRVNK*LFLSKLYGIKQRSQ Trigger: CTGGGACCTCTGCTTTATGCCATAAAGTTTACTGAGAAACAAGCATTTGTTCACTCTTCTGGGCAGTGGGCACAGTGCTGCATCTTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 |
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| CDS CCA 90 bp | CATTGTTTAGAAATACATGCATTCCTGCTTCTTCTCAAAGTGCATTaGTATCCACCAAGAAGAGGAGTGCTCTGGGCCTTGGGAGAACGT | + |
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Preference number: 5 (lower is better) Translates to: HCLEIHAFLLLLKVH*YPPRRGVLWALGER Trigger: ACGTTCTCCCAAGGCCCAGAGCACTCCTCTTCTTGGTGGATACCAATGCACTTTGAGAAGAAGCAGGAATGCATGTATTTCTAAACAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649950.1 ENST00000657981.1 ENST00000663386.1 |
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| CDS TCA 90 bp | ACCAAGAAGAGGAGTGCTGGTTTTGATTCCCATGGTAATACATTCTaGTCAGATCCTTGTCAACAAGTCTGTCCCTTTCGTTTGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: TKKRSAGFDSHGNTF*SDPCQQVCPFRLHS Trigger: GCTGTGCAAACGAAAGGGACAGACTTGTTGACAAGGATCTGATCAGAATGTATTACCATGGGAATCAAAACCAGCACTCCTCTTCTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554798.2 |
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| CDS GCA 90 bp | TGGCAAATGTCTTTGTTAAATAGTCCCTCTGAAGCACAGGTAAAATaGTTTCTGGAGAAACTGAGAATTATATGCAGAGGGGCTGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: WQMSLLNSPSEAQVK*FLEKLRIICRGAEG Trigger: ACCCTCAGCCCCTCTGCATATAATTCTCAGTTTCTCCAGAAAGCATTTTACCTGTGCTTCAGAGGGACTATTTAACAAAGACATTTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000554798.2 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 |
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| CDS GCA 90 bp | AAATATAAGACCAGAAACAAATATAAGTCAATATGGAGAGATCCTTaGGATGAGCACAGAGACTGCAGTAGAGGAAGCTTCAGAGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: KYKTRNKYKSIWRDP*DEHRDCSRGSFRGE Trigger: CTCCCCTCTGAAGCTTCCTCTACTGCAGTCTCTGTGCTCATCGCAAGGATCTCTCCATATTGACTTATATTTGTTTCTGGTCTTATATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000554798.2 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS CCA 90 bp | CGTACTATCCACACACACAGCGATCTATATACAGGAGTCCCTATATaGAGCCTGTTCATGATATTGGCCAGGTTTCTAGTGCAATTATTT | + |
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Preference number: 5 (lower is better) Translates to: RTIHTHSDLYTGVPI*SLFMILARFLVQLF Trigger: AAATAATTGCACTAGAAACCTGGCCAATATCATGAACAGGCTCCATATAGGGACTCCTGTATATAGATCGCTGTGTGTGTGGATAGTACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS CCA 90 bp | CATTGTTTAGAAATACATGCATTCCTGCTTCTTCTCAAAGTGCATTaGTATCCACCAAGAAGAGGAGTGCTGGTTTTGATTCCCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: HCLEIHAFLLLLKVH*YPPRRGVLVLIPMV Trigger: TACCATGGGAATCAAAACCAGCACTCCTCTTCTTGGTGGATACCAATGCACTTTGAGAAGAAGCAGGAATGCATGTATTTCTAAACAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554798.2 |
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| CDS TCA 90 bp | GATACTTCTTATGATATGGATGAACCTGGAAAGCCTCATGCTAAATaGAAGAAGCCAGATACAAAGGGTTGCGTAATGAATGATTCCATC | + |
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Preference number: 5 (lower is better) Translates to: DTSYDMDEPGKPHAK*KKPDTKGCVMNDSI Trigger: GATGGAATCATTCATTACGCAACCCTTTGTATCTGGCTTCTTTCATTTAGCATGAGGCTTTCCAGGTTCATCCATATCATAAGAAGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657981.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS TCA 90 bp | TTGTTTCTCAGTAAACTTTATGGCATAAAGCAGAGGTCCCAGCTATaGGAACTGAAGCTGTGGATATCTTACAGTGTTCAATTCATATGG | + |
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Preference number: 5 (lower is better) Translates to: LFLSKLYGIKQRSQL*ELKLWISYSVQFIW Trigger: CCATATGAATTGAACACTGTAAGATATCCACAGCTTCAGTTCTCATAGCTGGGACCTCTGCTTTATGCCATAAAGTTTACTGAGAAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 |
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| CDS CCA 90 bp | TTTTATGGTGAGGTGTCCAGCTTTCCCTCCAATCACACTTCCCATTaGTATGTTATGAAACAGTTTATGGCCTTCATTAACTTTGATGAT | + |
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Preference number: 5 (lower is better) Translates to: FYGEVSSFPSNHTSH*YVMKQFMAFINFDD Trigger: ATCATCAAAGTTAATGAAGGCCATAAACTGTTTCATAACATACCAATGGGAAGTGTGATTGGAGGGAAAGCTGGACACCTCACCATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000554798.2 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS TCA 90 bp | AGGTGTCCAGCTTTCCCTCCAATCACACTTCCCATTGGTATGTTATaGAACAGTTTATGGCCTTCATTAACTTTGATGATAATAATTAAA | + |
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Preference number: 5 (lower is better) Translates to: RCPAFPPITLPIGML*NSLWPSLTLMIIIK Trigger: TTTAATTATTATCATCAAAGTTAATGAAGGCCATAAACTGTTTCATAACATACCAATGGGAAGTGTGATTGGAGGGAAAGCTGGACACCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000554798.2 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS GCA 72 bp | GTGCTTCCTCTGGGTGTCAGCCTTCATGGAAGGGTCTaGATCAGACGTCAGACACGAGTGCTGCTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: VLPLGVSLHGRV*IRRQTRVLLSP Trigger: TGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGGCTGACACCCAGAGGAAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663386.1 ENST00000671500.1 |
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| CDS GCA 72 bp | GAGAGCAAGTCAGTGACCTGCCTTCATGGAAGGGTCTaGATCAGACGTCAGACACGAGTGCTGCTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: ESKSVTCLHGRV*IRRQTRVLLSP Trigger: TGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGGCAGGTCACTGACTTGCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000554798.2 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 |
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| CDS TCA 72 bp | TTATATGCAGAGGGGCTGAGGGTGAGAGCAAGTCAGTaGCCTGCCTTCATGGAAGGGTCTGCATCAGACGTC | + |
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Preference number: 6 (lower is better) Translates to: LYAEGLRVRASQ*PAFMEGSASDV Trigger: GACGTCTGATGCAGACCCTTCCATGAAGGCAGGTCACTGACTTGCTCTCACCCTCAGCCCCTCTGCATATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000554798.2 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 |
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| CDS CAA 90 bp | TCCTCTGGTCCCTGGTCATTGATAGATGGTTTCCTCTTGCCCTGTTaGTATGCTCTGCGGTCTCCTGTGCCTTGTTGCCATCCAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SSGPWSLIDGFLLPC*YALRSPVPCCHPGH Trigger: ATGCCCTGGATGGCAACAAGGCACAGGAGACCGCAGAGCATACAAACAGGGCAAGAGGAAACCATCTATCAATGACCAGGGACCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS GCA 72 bp | GATCAGATCCTTGTCAACAAGTCTGTCCCTTTCGTTTaGACAGCCCTTGACCTCTGGGCCTTGGGAGAACGT | + |
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Preference number: 6 (lower is better) Translates to: DQILVNKSVPFV*TALDLWALGER Trigger: ACGTTCTCCCAAGGCCCAGAGGTCAAGGGCTGTGCAAACGAAAGGGACAGACTTGTTGACAAGGATCTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554798.2 |
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| CDS GCA 72 bp | ATGGAAGGGTCTGCATCAGACGTCAGACACGAGTGCTaGTGTCACCACAACCCAGGTTTTACTTTGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: MEGSASDVRHEC*CHHNPGFTLPG Trigger: ACCAGGCAAAGTAAAACCTGGGTTGTGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS GCA 72 bp | GGGTGTCATTTTTCAAGGCCACTTCATGGAAGGGTCTaGATCAGACGTCAGACACGAGTGCTGCTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: GCHFSRPLHGRV*IRRQTRVLLSP Trigger: TGGTGACAGCAGCACTCGTGTCTGACGTCTGATGCAGACCCTTCCATGAAGTGGCCTTGAAAAATGACACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649950.1 |
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| CDS CAA 72 bp | TGCCTGGCCGTGGGTCAGGGTCCCCTGAGTCTTCCATaGGAGTCCCATGATTTTATGCCTGATTCTAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: CLAVGQGPLSLP*ESHDFMPDSKE Trigger: TTCCTTAGAATCAGGCATAAAATCATGGGACTCCAATGGAAGACTCAGGGGACCCTGACCCACGGCCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 |
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| CDS GCA 72 bp | GTCATTGATAGATGGTTTCCTCTTGCCCTGTTTGTATaGTCTGCGGTCTCCTGTGCCTTGTTGCCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VIDRWFPLALFV*SAVSCALLPSR Trigger: CCTGGATGGCAACAAGGCACAGGAGACCGCAGAGCATACAAACAGGGCAAGAGGAAACCATCTATCAATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS CCA 72 bp | GAGGCTTTAAAAACAGCTTCATTCTGCTCACTCTGGTaGCTCCAGTACCGCTCCAGGAATGTGGGGTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: EALKTASFCSLW*LQYRSRNVGCH Trigger: ATGACACCCCACATTCCTGGAGCGGTACTGGAGCCACCAGAGTGAGCAGAATGAAGCTGTTTTTAAAGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649950.1 |
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| CDS CAA 72 bp | CCCTGGTCATTGATAGATGGTTTCCTCTTGCCCTGTTaGTATGCTCTGCGGTCTCCTGTGCCTTGTTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PWSLIDGFLLPC*YALRSPVPCCH Trigger: ATGGCAACAAGGCACAGGAGACCGCAGAGCATACAAACAGGGCAAGAGGAAACCATCTATCAATGACCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS CAA 90 bp | AACTTTGCTTCCTCTGGTCCCTGGTCATTGATAGATGGTTTCCTCTaGCCCTGTTTGTATGCTCTGCGGTCTCCTGTGCCTTGTTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: NFASSGPWSLIDGFL*PCLYALRSPVPCCH Trigger: ATGGCAACAAGGCACAGGAGACCGCAGAGCATACAAACAGGGCAAGAGGAAACCATCTATCAATGACCAGGGACCAGAGGAAGCAAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS TCA 72 bp | TTAAGTCGAGCCGTTTCTGCTGTGCCAGTTTTATGGTaGGGTGTCCAGCTTTCCCTCCAATCACACTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSRAVSAVPVLW*GVQLSLQSHFP Trigger: TGGGAAGTGTGATTGGAGGGAAAGCTGGACACCTCACCATAAAACTGGCACAGCAGAAACGGCTCGACTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000554798.2 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS GCA 72 bp | GGGCCTTGGGAGAACGTGAGCGAGATGTTAGAACTTTaGTTCCTCTGGTCCCTGGTCATTGATAGATGGTTT | + |
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Preference number: 6 (lower is better) Translates to: GPWENVSEMLEL*FLWSLVIDRWF Trigger: AAACCATCTATCAATGACCAGGGACCAGAGGAAGCAAAGTTCTAACATCTCGCTCACGTTCTCCCAAGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS CCA 72 bp | GAACTTTGCTTCCTCTGGTCCCTGGTCATTGATAGATaGTTTCCTCTTGCCCTGTTTGTATGCTCTGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: ELCFLWSLVIDR*FPLALFVCSAV Trigger: GACCGCAGAGCATACAAACAGGGCAAGAGGAAACCATCTATCAATGACCAGGGACCAGAGGAAGCAAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS CCA 72 bp | AATGAGGCTTTAAAAACAGCTTCATTCTGCTCACTCTaGTGGCTCCAGTACCGCTCCAGGAATGTGGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: NEALKTASFCSL*WLQYRSRNVGC Trigger: ACACCCCACATTCCTGGAGCGGTACTGGAGCCACCAGAGTGAGCAGAATGAAGCTGTTTTTAAAGCCTCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649950.1 |
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| CDS TCA 72 bp | AGCTGTGGATATCTTACAGTGTTCAATTCATATGGATaGAGGGTTATCTGGGCCCATGAGGGGCTGTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SCGYLTVFNSYG*RVIWAHEGLSA Trigger: GGCAGACAGCCCCTCATGGGCCCAGATAACCCTTCATCCATATGAATTGAACACTGTAAGATATCCACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 |
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| CDS CCA 72 bp | GAGAACGTGAGCGAGATGTTAGAACTTTGCTTCCTCTaGTCCCTGGTCATTGATAGATGGTTTCCTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: ENVSEMLELCFL*SLVIDRWFPLA Trigger: GGCAAGAGGAAACCATCTATCAATGACCAGGGACCAGAGGAAGCAAAGTTCTAACATCTCGCTCACGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000554798.2 ENST00000649950.1 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS GCA 72 bp | ATCTTTGGGAATGAGGCTTTAAAAACAGCTTCATTCTaGTCACTCTGGTGGCTCCAGTACCGCTCCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: IFGNEALKTASF*SLWWLQYRSRN Trigger: ATTCCTGGAGCGGTACTGGAGCCACCAGAGTGAGCAGAATGAAGCTGTTTTTAAAGCCTCATTCCCAAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649950.1 |
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| CDS CCA 72 bp | GAAATACATGCATTCCTGCTTCTTCTCAAAGTGCATTaGTATCCACCAAGAAGAGGAGTGCTCTGGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: EIHAFLLLLKVH*YPPRRGVLWAL Trigger: CAAGGCCCAGAGCACTCCTCTTCTTGGTGGATACCAATGCACTTTGAGAAGAAGCAGGAATGCATGTATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649950.1 ENST00000657981.1 ENST00000663386.1 |
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| CDS CAA 90 bp | TCATTGTTTAGAAATACATGCATTCCTGCTTCTTCTCAAAGTGCATaGGTATCCACCAAGAAGAGGAGTGCTCTGGGCCTTGGGAGAACG | + |
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Preference number: 6 (lower is better) Translates to: SLFRNTCIPASSQSA*VSTKKRSALGLGRT Trigger: CGTTCTCCCAAGGCCCAGAGCACTCCTCTTCTTGGTGGATACCAATGCACTTTGAGAAGAAGCAGGAATGCATGTATTTCTAAACAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649950.1 ENST00000657981.1 ENST00000663386.1 |
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| CDS CAA 90 bp | AAAGATGCAGCACTGTGCCCACTGCCCAGAAGAGTGAACAAATGCTaGTTTCTCAGTAAACTTTATGGCATAAAGCAGAGGTCCCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: KDAALCPLPRRVNKC*FLSKLYGIKQRSQL Trigger: TAGCTGGGACCTCTGCTTTATGCCATAAAGTTTACTGAGAAACAAGCATTTGTTCACTCTTCTGGGCAGTGGGCACAGTGCTGCATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 |
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| CDS CCA 72 bp | TCTCCAAGTCAGGTCAAATACAGACAATCTTGCATGTaGAGTCTTCCAGAGTATTACCAGACAGGTCTGACG | + |
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Preference number: 6 (lower is better) Translates to: SPSQVKYRQSCM*SLPEYYQTGLT Trigger: CGTCAGACCTGTCTGGTAATACTCTGGAAGACTCCACATGCAAGATTGTCTGTATTTGACCTGACTTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649950.1 |
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| CDS CCA 72 bp | CACACACACAGCGATCTATATACAGGAGTCCCTATATaGAGCCTGTTCATGATATTGGCCAGGTTTCTAGTG | + |
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Preference number: 6 (lower is better) Translates to: HTHSDLYTGVPI*SLFMILARFLV Trigger: CACTAGAAACCTGGCCAATATCATGAACAGGCTCCATATAGGGACTCCTGTATATAGATCGCTGTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS CAA 72 bp | AGAAATACATGCATTCCTGCTTCTTCTCAAAGTGCATaGGTATCCACCAAGAAGAGGAGTGCTCTGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: RNTCIPASSQSA*VSTKKRSALGL Trigger: AAGGCCCAGAGCACTCCTCTTCTTGGTGGATACCAATGCACTTTGAGAAGAAGCAGGAATGCATGTATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649950.1 ENST00000657981.1 ENST00000663386.1 |
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| CDS TCA 72 bp | AGGAGTGCTGGTTTTGATTCCCATGGTAATACATTCTaGTCAGATCCTTGTCAACAAGTCTGTCCCTTTCGT | + |
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Preference number: 6 (lower is better) Translates to: RSAGFDSHGNTF*SDPCQQVCPFR Trigger: ACGAAAGGGACAGACTTGTTGACAAGGATCTGATCAGAATGTATTACCATGGGAATCAAAACCAGCACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554798.2 |
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| CDS CAA 90 bp | TCATTGTTTAGAAATACATGCATTCCTGCTTCTTCTCAAAGTGCATaGGTATCCACCAAGAAGAGGAGTGCTGGTTTTGATTCCCATGGT | + |
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Preference number: 6 (lower is better) Translates to: SLFRNTCIPASSQSA*VSTKKRSAGFDSHG Trigger: ACCATGGGAATCAAAACCAGCACTCCTCTTCTTGGTGGATACCAATGCACTTTGAGAAGAAGCAGGAATGCATGTATTTCTAAACAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554798.2 |
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| CDS CAA 90 bp | AGCGATCTATATACAGGAGTCCCTATATGGAGCCTGTTCATGATATaGGCCAGGTTTCTAGTGCAATTATTTCTCTTCCATCTTCTAAGT | + |
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Preference number: 6 (lower is better) Translates to: SDLYTGVPIWSLFMI*ARFLVQLFLFHLLS Trigger: ACTTAGAAGATGGAAGAGAAATAATTGCACTAGAAACCTGGCCAATATCATGAACAGGCTCCATATAGGGACTCCTGTATATAGATCGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS TCA 72 bp | AGTAAACTTTATGGCATAAAGCAGAGGTCCCAGCTATaGGAACTGAAGCTGTGGATATCTTACAGTGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SKLYGIKQRSQL*ELKLWISYSVQ Trigger: TTGAACACTGTAAGATATCCACAGCTTCAGTTCTCATAGCTGGGACCTCTGCTTTATGCCATAAAGTTTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 |
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| CDS TCA 72 bp | TATGATATGGATGAACCTGGAAAGCCTCATGCTAAATaGAAGAAGCCAGATACAAAGGGTTGCGTAATGAAT | + |
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Preference number: 6 (lower is better) Translates to: YDMDEPGKPHAK*KKPDTKGCVMN Trigger: ATTCATTACGCAACCCTTTGTATCTGGCTTCTTTCATTTAGCATGAGGCTTTCCAGGTTCATCCATATCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657981.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS TCA 72 bp | GCTTTCCCTCCAATCACACTTCCCATTGGTATGTTATaGAACAGTTTATGGCCTTCATTAACTTTGATGATA | + |
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Preference number: 6 (lower is better) Translates to: AFPPITLPIGML*NSLWPSLTLMI Trigger: TATCATCAAAGTTAATGAAGGCCATAAACTGTTTCATAACATACCAATGGGAAGTGTGATTGGAGGGAAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000554798.2 ENST00000657981.1 ENST00000660238.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS TCA 72 bp | ATGAAAGAAGCCAGATACAAAGGGTTGCGTAATGAATaGTTCCATCTATATGAAGCATCCAGAATAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: MKEARYKGLRNE*FHLYEASRIGK Trigger: TTTGCCTATTCTGGATGCTTCATATAGATGGAATCATTCATTACGCAACCCTTTGTATCTGGCTTCTTTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657981.1 ENST00000661284.1 ENST00000661923.1 ENST00000663386.1 ENST00000671500.1 |
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| CDS TCA 72 bp | CAAGCAGGTATGTGTACATCCATGTTCATAACAGCATaGTTTACAATTCCAAGAGGTAGAAACAATCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: QAGMCTSMFITA*FTIPRGRNNPN Trigger: ATTTGGATTGTTTCTACCTCTTGGAATTGTAAATCATGCTGTTATGAACATGGATGTACACATACCTGCTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663386.1 |
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