Pregenerated sensors for LINC02247 (Homo sapiens)
Ensembl gene IDs: ENSG00000223729Ensembl transcript IDs: ENST00000417135.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGGCCTCGCCTGGGCGGCTCCTCGGCCTTCCCTGGCCGGCGCACTaGAGCTTTGTCCACCCAGCGCCAGAGAGGGCTCCAGCGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RASPGRLLGLPWPAH*SFVHPAPERAPAGG Trigger: CCCGCCCGCTGGAGCCCTCTCTGGCGCTGGGTGGACAAAGCTGCAGTGCGCCGGCCAGGGAAGGCCGAGGAGCCGCCCAGGCGAGGCCCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CCA 90 bp | CACCAGGCAGCTCGGGCCTCGCCTGGGCGGCTCCTCGGCCTTCCCTaGCCGGCGCACTGCAGCTTTGTCCACCCAGCGCCAGAGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HQAARASPGRLLGLP*PAHCSFVHPAPERA Trigger: AGCCCTCTCTGGCGCTGGGTGGACAAAGCTGCAGTGCGCCGGCCAGGGAAGGCCGAGGAGCCGCCCAGGCGAGGCCCGAGCTGCCTGGTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CCA 90 bp | GGCCTGGGGTCCACACAGATGCCACCAGGCAGCTCGGGCCTCGCCTaGGCGGCTCCTCGGCCTTCCCTGGCCGGCGCACTGCAGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLGSTQMPPGSSGLA*AAPRPSLAGALQLC Trigger: ACAAAGCTGCAGTGCGCCGGCCAGGGAAGGCCGAGGAGCCGCCCAGGCGAGGCCCGAGCTGCCTGGTGGCATCTGTGTGGACCCCAGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS GCA 90 bp | TGTCCACCCAGCGCCAGAGAGGGCTCCAGCGGGCGGGGCTGGGGCTaGGCTTTGCATCCGGAACAGACACGCTGCCTGCCTGTGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: CPPSAREGSSGRGWG*ALHPEQTRCLPVAT Trigger: GGTGGCCACAGGCAGGCAGCGTGTCTGTTCCGGATGCAAAGCGCAGCCCCAGCCCCGCCCGCTGGAGCCCTCTCTGGCGCTGGGTGGACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS TCA 90 bp | CCTGCCTGTGGCCACCTCTCCTTCCCAGCCTGGCCGCAGCTGCGATaGACTCCTGGTGAACGTGGAGGGCTTCATAGGGCTGGCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PACGHLSFPAWPQLR*TPGERGGLHRAGFP Trigger: GGGGAAGCCAGCCCTATGAAGCCCTCCACGTTCACCAGGAGTTCATCGCAGCTGCGGCCAGGCTGGGAAGGAGAGGTGGCCACAGGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CCA 90 bp | CAGTTTGCTCCATCCACTGAGCTGGCTCAGGGAGCTCCTGCCGAGTaGGTGGTCCCCTTTCCCGGGCCACCTGTGAGGAATGTGAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QFAPSTELAQGAPAE*VVPFPGPPVRNVSW Trigger: CCAACTCACATTCCTCACAGGTGGCCCGGGAAAGGGGACCACCCACTCGGCAGGAGCTCCCTGAGCCAGCTCAGTGGATGGAGCAAACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS TCA 90 bp | GGGGGCTGGTCCGGGGCTGTCTCTTGCTCCGTCTGGGCATCACTTTaGTTTCCAAGTCAGTTTGCTCCATCCACTGAGCTGGCTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGWSGAVSCSVWASL*FPSQFAPSTELAQG Trigger: TCCCTGAGCCAGCTCAGTGGATGGAGCAAACTGACTTGGAAATCAAAGTGATGCCCAGACGGAGCAAGAGACAGCCCCGGACCAGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CAA 90 bp | CGCCTGGGCGGCTCCTCGGCCTTCCCTGGCCGGCGCACTGCAGCTTaGTCCACCCAGCGCCAGAGAGGGCTCCAGCGGGCGGGGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLGGSSAFPGRRTAA*STQRQRGLQRAGLG Trigger: CCCCAGCCCCGCCCGCTGGAGCCCTCTCTGGCGCTGGGTGGACAAAGCTGCAGTGCGCCGGCCAGGGAAGGCCGAGGAGCCGCCCAGGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CCA 72 bp | GCTCGGGCCTCGCCTGGGCGGCTCCTCGGCCTTCCCTaGCCGGCGCACTGCAGCTTTGTCCACCCAGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ARASPGRLLGLP*PAHCSFVHPAP Trigger: TGGCGCTGGGTGGACAAAGCTGCAGTGCGCCGGCCAGGGAAGGCCGAGGAGCCGCCCAGGCGAGGCCCGAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CCA 72 bp | TCCACACAGATGCCACCAGGCAGCTCGGGCCTCGCCTaGGCGGCTCCTCGGCCTTCCCTGGCCGGCGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: STQMPPGSSGLA*AAPRPSLAGAL Trigger: CAGTGCGCCGGCCAGGGAAGGCCGAGGAGCCGCCCAGGCGAGGCCCGAGCTGCCTGGTGGCATCTGTGTGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CAA 72 bp | GGCTCCTCGGCCTTCCCTGGCCGGCGCACTGCAGCTTaGTCCACCCAGCGCCAGAGAGGGCTCCAGCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GSSAFPGRRTAA*STQRQRGLQRA Trigger: CGCCCGCTGGAGCCCTCTCTGGCGCTGGGTGGACAAAGCTGCAGTGCGCCGGCCAGGGAAGGCCGAGGAGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS GCA 72 bp | CCTGGGCGGCTCCTCGGCCTTCCCTGGCCGGCGCACTaGAGCTTTGTCCACCCAGCGCCAGAGAGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PGRLLGLPWPAH*SFVHPAPERAP Trigger: TGGAGCCCTCTCTGGCGCTGGGTGGACAAAGCTGCAGTGCGCCGGCCAGGGAAGGCCGAGGAGCCGCCCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CAA 90 bp | CCCAGCGCCAGAGAGGGCTCCAGCGGGCGGGGCTGGGGCTGCGCTTaGCATCCGGAACAGACACGCTGCCTGCCTGTGGCCACCTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSAREGSSGRGWGCA*HPEQTRCLPVATSP Trigger: AGGAGAGGTGGCCACAGGCAGGCAGCGTGTCTGTTCCGGATGCAAAGCGCAGCCCCAGCCCCGCCCGCTGGAGCCCTCTCTGGCGCTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS GCA 72 bp | AGCGCCAGAGAGGGCTCCAGCGGGCGGGGCTGGGGCTaGGCTTTGCATCCGGAACAGACACGCTGCCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SAREGSSGRGWG*ALHPEQTRCLP Trigger: AGGCAGGCAGCGTGTCTGTTCCGGATGCAAAGCGCAGCCCCAGCCCCGCCCGCTGGAGCCCTCTCTGGCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CCA 72 bp | CCATCCACTGAGCTGGCTCAGGGAGCTCCTGCCGAGTaGGTGGTCCCCTTTCCCGGGCCACCTGTGAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PSTELAQGAPAE*VVPFPGPPVRN Trigger: ATTCCTCACAGGTGGCCCGGGAAAGGGGACCACCCACTCGGCAGGAGCTCCCTGAGCCAGCTCAGTGGATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CCA 72 bp | TGTGAGTTGGAGGTCGAGTGTGCTGAGGCAGTGACATaGCCTGGGGTCCACACAGATGCCACCAGGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CELEVECAEAVT*PGVHTDATRQL Trigger: GAGCTGCCTGGTGGCATCTGTGTGGACCCCAGGCCATGTCACTGCCTCAGCACACTCGACCTCCAACTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CAA 90 bp | CTGTCTCTTGCTCCGTCTGGGCATCACTTTGATTTCCAAGTCAGTTaGCTCCATCCACTGAGCTGGCTCAGGGAGCTCCTGCCGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLAPSGHHFDFQVS*LHPLSWLRELLPSG Trigger: CCCACTCGGCAGGAGCTCCCTGAGCCAGCTCAGTGGATGGAGCAAACTGACTTGGAAATCAAAGTGATGCCCAGACGGAGCAAGAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS CAA 72 bp | GCTCCGTCTGGGCATCACTTTGATTTCCAAGTCAGTTaGCTCCATCCACTGAGCTGGCTCAGGGAGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: APSGHHFDFQVS*LHPLSWLRELL Trigger: CAGGAGCTCCCTGAGCCAGCTCAGTGGATGGAGCAAACTGACTTGGAAATCAAAGTGATGCCCAGACGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||
| CDS TCA 72 bp | TCCGGGGCTGTCTCTTGCTCCGTCTGGGCATCACTTTaGTTTCCAAGTCAGTTTGCTCCATCCACTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGAVSCSVWASL*FPSQFAPSTEL Trigger: CAGCTCAGTGGATGGAGCAAACTGACTTGGAAATCAAAGTGATGCCCAGACGGAGCAAGAGACAGCCCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417135.1 |
||