Pregenerated sensors for LINC02245 (Homo sapiens)
Ensembl gene IDs: ENSG00000237638Ensembl transcript IDs: ENST00000449259.1, ENST00000653778.1, ENST00000659575.1, ENST00000666526.1, ENST00000669631.1
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGTTCCTCACATGTGAGCCTCTTCCCCATGGGGCAGCTCACAACATaGCAGCCCATCTCCATCTGTTCGGGCCTCGGTCGCGCCGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: SSSHVSLFPMGQLTT*QPISICSGLGRAAG Trigger: CCCGGCGGCGCGACCGAGGCCCGAACAGATGGAGATGGGCTGCCATGTTGTGAGCTGCCCCATGGGGAAGAGGCTCACATGTGAGGAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653778.1 ENST00000666526.1 |
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| CDS GCA 90 bp | GCTTCTAGGGCTGATCCCCCATGGTGGGGCTGTCCTTTGAGCTCCTaGTCGGACACTGCTGGGATCCAAAGGCCCAGGAGCCAGACTGTA | + |
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Preference number: 5 (lower is better) Translates to: ASRADPPWWGCPLSS*SDTAGIQRPRSQTV Trigger: TACAGTCTGGCTCCTGGGCCTTTGGATCCCAGCAGTGTCCGAGCAGGAGCTCAAAGGACAGCCCCACCATGGGGGATCAGCCCTAGAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS GCA 90 bp | GGAGAGCCTCGTGACTGCGGCACGGCGGCGAGCCGGGAACATCAGTaGGTCCAGAGCAAAATGAACGAATGTACGCATGACTCCTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GEPRDCGTAASREHQ*VQSKMNECTHDSWS Trigger: GCTCCAGGAGTCATGCGTACATTCGTTCATTTTGCTCTGGACGCACTGATGTTCCCGGCTCGCCGCCGTGCCGCAGTCACGAGGCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653778.1 ENST00000666526.1 |
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| CDS TCA 90 bp | GCGGCACGGCGGCGAGCCGGGAACATCAGTGCGTCCAGAGCAAAATaGACGAATGTACGCATGACTCCTGGAGCGACCTTCACGAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: AARRRAGNISASRAK*TNVRMTPGATFTRE Trigger: TTCCCTCGTGAAGGTCGCTCCAGGAGTCATGCGTACATTCGTTCATTTTGCTCTGGACGCACTGATGTTCCCGGCTCGCCGCCGTGCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653778.1 ENST00000666526.1 |
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| CDS TCA 90 bp | GCGAATGTAAACAGAAACACAGTGAAAGGCGTTCGGAGAGCCTCGTaGCTGCGGCACGGCGGCGAGCCGGGAACATCAGTGCGTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: ANVNRNTVKGVRRAS*LRHGGEPGTSVRPE Trigger: CTCTGGACGCACTGATGTTCCCGGCTCGCCGCCGTGCCGCAGTCACGAGGCTCTCCGAACGCCTTTCACTGTGTTTCTGTTTACATTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653778.1 ENST00000666526.1 |
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| CDS GCA 90 bp | CAGCCCATCTCCATCTGTTCGGGCCTCGGTCGCGCCGCCGGGTCTTaGAGACGCGAATGTAAACAGAAACACAGTGAAAGGCGTTCGGAG | + |
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Preference number: 5 (lower is better) Translates to: QPISICSGLGRAAGS*RRECKQKHSERRSE Trigger: CTCCGAACGCCTTTCACTGTGTTTCTGTTTACATTCGCGTCTGCAAGACCCGGCGGCGCGACCGAGGCCCGAACAGATGGAGATGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653778.1 ENST00000666526.1 |
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| CDS CCA 90 bp | TCCCCCATGGTGGGGCTGTCCTTTGAGCTCCTGCTCGGACACTGCTaGGATCCAAAGGCCCAGGAGCCAGACTGTAAATGGAGCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SPMVGLSFELLLGHC*DPKAQEPDCKWSWR Trigger: TCTCCAGCTCCATTTACAGTCTGGCTCCTGGGCCTTTGGATCCCAGCAGTGTCCGAGCAGGAGCTCAAAGGACAGCCCCACCATGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CCA 90 bp | GCGTCCGTTGGAGATGTAGTGACAGCTTCTAGGGCTGATCCCCCATaGTGGGGCTGTCCTTTGAGCTCCTGCTCGGACACTGCTGGGATC | + |
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Preference number: 5 (lower is better) Translates to: ASVGDVVTASRADPP*WGCPLSSCSDTAGI Trigger: GATCCCAGCAGTGTCCGAGCAGGAGCTCAAAGGACAGCCCCACCATGGGGGATCAGCCCTAGAAGCTGTCACTACATCTCCAACGGACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS TCA 90 bp | ATTGCCCTCCACCAAAGGCAGAGCAAGGGGAGCGTTGTTGCTTCTTaGGGACCAGTGGAAAGTCTCCAAGGCAGCCATTGTGGGGGCATC | + |
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Preference number: 5 (lower is better) Translates to: IALHQRQSKGSVVAS*GPVESLQGSHCGGI Trigger: GATGCCCCCACAATGGCTGCCTTGGAGACTTTCCACTGGTCCTCAAGAAGCAACAACGCTCCCCTTGCTCTGCCTTTGGTGGAGGGCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS TCA 90 bp | ATTCCTGAGAATATTCCACCTCAAGGGCTCGCAGGCTTCCCTGGATaGGAATCACCTGGAGGGCCTGTGCAAGGACTGCTACCACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: IPENIPPQGLAGFPG*ESPGGPVQGLLPPA Trigger: GGCTGGTGGTAGCAGTCCTTGCACAGGCCCTCCAGGTGATTCTCATCCAGGGAAGCCTGCGAGCCCTTGAGGTGGAATATTCTCAGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CCA 90 bp | CTCGGACACTGCTGGGATCCAAAGGCCCAGGAGCCAGACTGTAAATaGAGCTGGAGAAGTCCTGACTCTTCTGGCTTGGGGTCTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: LGHCWDPKAQEPDCK*SWRSPDSSGLGSVT Trigger: TGTGACAGACCCCAAGCCAGAAGAGTCAGGACTTCTCCAGCTCCATTTACAGTCTGGCTCCTGGGCCTTTGGATCCCAGCAGTGTCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653778.1 |
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| CDS GCA 90 bp | AGGAGGAATTGCCCTCCACCAAAGGCAGAGCAAGGGGAGCGTTGTTaGTTCTTGAGGACCAGTGGAAAGTCTCCAAGGCAGCCATTGTGG | + |
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Preference number: 5 (lower is better) Translates to: RRNCPPPKAEQGERC*FLRTSGKSPRQPLW Trigger: CCACAATGGCTGCCTTGGAGACTTTCCACTGGTCCTCAAGAAGCAACAACGCTCCCCTTGCTCTGCCTTTGGTGGAGGGCAATTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CCA 90 bp | TGTGAGGTGAACTTCACATTCCCATGGCTCCACATGGCAGAGTCCTaGGAATGGTGGACAAGACCCCAGTTTGGGGGATCTCTGAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: CEVNFTFPWLHMAES*EWWTRPQFGGSLRN Trigger: GTTCCTCAGAGATCCCCCAAACTGGGGTCTTGTCCACCATTCCCAGGACTCTGCCATGTGGAGCCATGGGAATGTGAAGTTCACCTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CCA 90 bp | GCACAATTCCTTCCTGTGGGCCTTCCCTATGCTGGACTCTTCATCTaGAATACTCTCATCCCTCACCTCCACATGTCCAAGGCCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: AQFLPVGLPYAGLFI*NTLIPHLHMSKAQF Trigger: GAACTGGGCCTTGGACATGTGGAGGTGAGGGATGAGAGTATTCCAGATGAAGAGTCCAGCATAGGGAAGGCCCACAGGAAGGAATTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS TCA 90 bp | GCCATCCAGAGGACCTTGAGATTTGGAGACAAGGGCACCACCTTGTaGTTTTACCCTTTCTCCTATGGGCAGGAAGCTCATTCACCTGCC | + |
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Preference number: 5 (lower is better) Translates to: AIQRTLRFGDKGTTL*FYPFSYGQEAHSPA Trigger: GGCAGGTGAATGAGCTTCCTGCCCATAGGAGAAAGGGTAAAATCACAAGGTGGTGCCCTTGTCTCCAAATCTCAAGGTCCTCTGGATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS TCA 90 bp | CAGTTGAAGTTGCCTTCCTCAACATCACTCCACCTCCTTTCTCTATaGGCTCTTCCCATCCAGTGTGGCGTCTTCCAGCAGGCTTTAGGC | + |
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Preference number: 5 (lower is better) Translates to: QLKLPSSTSLHLLSL*ALPIQCGVFQQALG Trigger: GCCTAAAGCCTGCTGGAAGACGCCACACTGGATGGGAAGAGCTCATAGAGAAAGGAGGTGGAGTGATGTTGAGGAAGGCAACTTCAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS GCA 90 bp | GACGATAAACGTGTTGGCAATTCTGGCAGAACAGGGCATCCACCGTaGCCCTCGGAAGGTGGCAGCTGTTCTTTATTGCCTTCTGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: DDKRVGNSGRTGHPP*PSEGGSCSLLPSEN Trigger: ATTCTCAGAAGGCAATAAAGAACAGCTGCCACCTTCCGAGGGGCACGGTGGATGCCCTGTTCTGCCAGAATTGCCAACACGTTTATCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS TCA 90 bp | TATCATGCCAGTTGCCATGGGTCAGGAGTGCAGGCACTGCTTACCTaGCTCTTCTGGCTTGGGGTCTGTCACAAGCTACAAATCAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: YHASCHGSGVQALLT*LFWLGVCHKLQIKV Trigger: CACTTTGATTTGTAGCTTGTGACAGACCCCAAGCCAGAAGAGTCAGGTAAGCAGTGCCTGCACTCCTGACCCATGGCAACTGGCATGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666526.1 |
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| CDS GCA 90 bp | AACTCCCTGATATCCTGGCATGTAACACCTCTGTGGCCCTTTTGGTaGCTAGCATGCCTAGCACCATACCTGGCACATACAAGTCTACAG | + |
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Preference number: 5 (lower is better) Translates to: NSLISWHVTPLWPFW*LACLAPYLAHTSLQ Trigger: CTGTAGACTTGTATGTGCCAGGTATGGTGCTAGGCATGCTAGGCACCAAAAGGGCCACAGAGGTGTTACATGCCAGGATATCAGGGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS GCA 90 bp | ACGAGACCTCTGAAGTCCTTCCTGATTGATGATTGTCAATCAGATTaGTCTGGCAGAGAGATGAGCTGCTGCTGGGTCCGAGATGCGGAA | + |
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Preference number: 5 (lower is better) Translates to: TRPLKSFLIDDCQSD*SGREMSCCWVRDAE Trigger: TTCCGCATCTCGGACCCAGCAGCAGCTCATCTCTCTGCCAGAGCAATCTGATTGACAATCATCAATCAGGAAGGACTTCAGAGGTCTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS CCA 90 bp | CACTATGTCATGAACTCCCTGATATCCTGGCATGTAACACCTCTGTaGCCCTTTTGGTGCCTAGCATGCCTAGCACCATACCTGGCACAT | + |
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Preference number: 5 (lower is better) Translates to: HYVMNSLISWHVTPL*PFWCLACLAPYLAH Trigger: ATGTGCCAGGTATGGTGCTAGGCATGCTAGGCACCAAAAGGGCCACAGAGGTGTTACATGCCAGGATATCAGGGAGTTCATGACATAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CCA 90 bp | AACATCACTCCACCTCCTTTCTCTATGAGCTCTTCCCATCCAGTGTaGCGTCTTCCAGCAGGCTTTAGGCTTTTTACTAGGCCCCTAGGT | + |
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Preference number: 5 (lower is better) Translates to: NITPPPFSMSSSHPV*RLPAGFRLFTRPLG Trigger: ACCTAGGGGCCTAGTAAAAAGCCTAAAGCCTGCTGGAAGACGCCACACTGGATGGGAAGAGCTCATAGAGAAAGGAGGTGGAGTGATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS TCA 90 bp | TCATATGGTTGTCAGCAGGATTCAGTTCCTCATAGGCTATTGGACTaGGGGTCTCAGTTCTTCACTGGCTGTTTTCTGGAGGCCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: SYGCQQDSVPHRLLD*GSQFFTGCFLEASL Trigger: GAGGGAGGCCTCCAGAAAACAGCCAGTGAAGAACTGAGACCCTCAGTCCAATAGCCTATGAGGAACTGAATCCTGCTGACAACCATATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653778.1 ENST00000666526.1 ENST00000669631.1 |
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| CDS TCA 90 bp | GACACAGATGGCTGTCATGGTTCTAAGTGTCCAGTTCAAATAAGGTaGCATCCAGCAGAGGAAGACAGGCCAGAATTGCATTGTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: DTDGCHGSKCPVQIR*HPAEEDRPELHCGP Trigger: GGGCCCACAATGCAATTCTGGCCTGTCTTCCTCTGCTGGATGTCACCTTATTTGAACTGGACACTTAGAACCATGACAGCCATCTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS GCA 90 bp | AAGAGAGCAGGAAATGAAATGCATGTGACTTGTGTTCCAGGAGCTTaGTGTCTGCAGGGGAGGTGTATGAGAAGTGTCTGCAGAGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: KRAGNEMHVTCVPGA*CLQGRCMRSVCRAS Trigger: TGAGGCTCTGCAGACACTTCTCATACACCTCCCCTGCAGACAGCAAGCTCCTGGAACACAAGTCACATGCATTTCATTTCCTGCTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CCA 90 bp | ATGAACTCCCTGATATCCTGGCATGTAACACCTCTGTGGCCCTTTTaGTGCCTAGCATGCCTAGCACCATACCTGGCACATACAAGTCTA | + |
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Preference number: 5 (lower is better) Translates to: MNSLISWHVTPLWPF*CLACLAPYLAHTSL Trigger: TAGACTTGTATGTGCCAGGTATGGTGCTAGGCATGCTAGGCACCAAAAGGGCCACAGAGGTGTTACATGCCAGGATATCAGGGAGTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CCA 90 bp | AGCCAGACTGTAAATGGAGCTGGAGAAGTCCTGACTCTTCTGGCTTaGGGTCTGTCACAAGCTACAAATCAAAGTGTCAAGTGGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SQTVNGAGEVLTLLA*GLSQATNQSVKWAA Trigger: TGCAGCCCACTTGACACTTTGATTTGTAGCTTGTGACAGACCCCAAGCCAGAAGAGTCAGGACTTCTCCAGCTCCATTTACAGTCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653778.1 |
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| CDS CCA 90 bp | GCCTTTGGCACAGGAATTAGCTTGGATTTCCTGACTCTTCTGGCTTaGGGTCTGTCACAAGCTACAAATCAAAGTGTCAAGTGGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: AFGTGISLDFLTLLA*GLSQATNQSVKWAA Trigger: TGCAGCCCACTTGACACTTTGATTTGTAGCTTGTGACAGACCCCAAGCCAGAAGAGTCAGGAAATCCAAGCTAATTCCTGTGCCAAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS TCA 90 bp | AGAAATAGCCTATGCCATCAGTTCTTCACATATCTCAGGGATTCCTaGGAATATTCCACCTCAAGGGCTCGCAGGCTTCCCTGGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: RNSLCHQFFTYLRDS*EYSTSRARRLPWMR Trigger: TCTCATCCAGGGAAGCCTGCGAGCCCTTGAGGTGGAATATTCTCAGGAATCCCTGAGATATGTGAAGAACTGATGGCATAGGCTATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS TCA 90 bp | CCTCTCTTAAGCCAGCCTTTGGCACAGGAATTAGCTTGGATTTCCTaGCTCTTCTGGCTTGGGGTCTGTCACAAGCTACAAATCAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: PLLSQPLAQELAWIS*LFWLGVCHKLQIKV Trigger: CACTTTGATTTGTAGCTTGTGACAGACCCCAAGCCAGAAGAGTCAGGAAATCCAAGCTAATTCCTGTGCCAAAGGCTGGCTTAAGAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS CCA 90 bp | CTCATTCATATGGTTGTCAGCAGGATTCAGTTCCTCATAGGCTATTaGACTGAGGGTCTCAGTTCTTCACTGGCTGTTTTCTGGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LIHMVVSRIQFLIGY*TEGLSSSLAVFWRP Trigger: AGGCCTCCAGAAAACAGCCAGTGAAGAACTGAGACCCTCAGTCCAATAGCCTATGAGGAACTGAATCCTGCTGACAACCATATGAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653778.1 ENST00000666526.1 ENST00000669631.1 |
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| CDS TCA 90 bp | GTCACAAGCTACAAATCAAAGTGTCAAGTGGGCTGCAGTCTCACATaGAGGCTTCACTGGGGAAGGATCTGCTTCCAAGCTCATTCATAT | + |
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Preference number: 5 (lower is better) Translates to: VTSYKSKCQVGCSLT*RLHWGRICFQAHSY Trigger: ATATGAATGAGCTTGGAAGCAGATCCTTCCCCAGTGAAGCCTTCATGTGAGACTGCAGCCCACTTGACACTTTGATTTGTAGCTTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653778.1 ENST00000666526.1 ENST00000669631.1 |
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| CDS CCA 90 bp | GGAAATGCCTCTAAGACAGCATTAATACAGCACAATTCCTTCCTGTaGGCCTTCCCTATGCTGGACTCTTCATCTGGAATACTCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: GNASKTALIQHNSFL*AFPMLDSSSGILSS Trigger: GGATGAGAGTATTCCAGATGAAGAGTCCAGCATAGGGAAGGCCCACAGGAAGGAATTGTGCTGTATTAATGCTGTCTTAGAGGCATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CCA 90 bp | TTTGCCATCATGCCCTTAAAGAAGTCCATATTCAACATGTCAGCTTaGTTCTCTGGCTCACTCCCTCATAGACACAGATGGCTGTCATGG | + |
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Preference number: 5 (lower is better) Translates to: FAIMPLKKSIFNMSA*FSGSLPHRHRWLSW Trigger: CCATGACAGCCATCTGTGTCTATGAGGGAGTGAGCCAGAGAACCAAGCTGACATGTTGAATATGGACTTCTTTAAGGGCATGATGGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS TCA 90 bp | CCTGGTCAGCTTGGGGTCTATAGAATGGTTGAGGTAATTTTTGGATaGTTTCTTGGGAGAGTGCTATGCTGTAAGCCTACAAGAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PGQLGVYRMVEVIFG*FLGRVLCCKPTRGK Trigger: CTTTCCTCTTGTAGGCTTACAGCATAGCACTCTCCCAAGAAATCATCCAAAAATTACCTCAACCATTCTATAGACCCCAAGCTGACCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS TCA 90 bp | CCTGGCACATACAAGTCTACAGCTGATAGTTGCCCATTTATTCATTaGTCCTTGCTTTCAACATGTATTGAGAGCCCATGTTGGGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: PGTYKSTADSCPFIH*SLLSTCIESPCWVV Trigger: TACCACCCAACATGGGCTCTCAATACATGTTGAAAGCAAGGATCAATGAATAAATGGGCAACTATCAGCTGTAGACTTGTATGTGCCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS GCA 90 bp | GTAACCACTGCTAACAGTTTAACAAACGTCTTTCTGCACCTTTTCTaGTGCTCACACAAACATACACAGAGGCTTCATCATAAAAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: VTTANSLTNVFLHLF*CSHKHTQRLHHKSS Trigger: TGAGCTTTTATGATGAAGCCTCTGTGTATGTTTGTGTGAGCAGCAGAAAAGGTGCAGAAAGACGTTTGTTAAACTGTTAGCAGTGGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS TCA 90 bp | ACAGAAACCCTTTCAATACTCTCTCTCTCTCTCTCTGAAGTAATTTaGGTATCTGTGTCTGGCAATGGAAATGCCTCTAAGACAGCATTA | + |
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Preference number: 5 (lower is better) Translates to: TETLSILSLSLSEVI*VSVSGNGNASKTAL Trigger: TAATGCTGTCTTAGAGGCATTTCCATTGCCAGACACAGATACTCAAATTACTTCAGAGAGAGAGAGAGAGAGTATTGAAAGGGTTTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS GCA 90 bp | TGTTCTTTATTGCCTTCTGAGAATCCAAAACGACTGTTGCCAGATTaGCTGCTTCTCCAAAAGAGTTTGAAATCTGGAGTTGCATGTAAA | + |
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Preference number: 5 (lower is better) Translates to: CSLLPSENPKRLLPD*LLLQKSLKSGVACK Trigger: TTTACATGCAACTCCAGATTTCAAACTCTTTTGGAGAAGCAGGCAATCTGGCAACAGTCGTTTTGGATTCTCAGAAGGCAATAAAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CCA 72 bp | GAGGGTCCAGGCCGTCACTCGCCGGCTAGGTGGCTGTaGCAAGTCTCTGTAGTAAAGGGGCCACGAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: EGPGRHSPARWL*QVSVVKGPRDL Trigger: GAGGTCTCGTGGCCCCTTTACTACAGAGACTTGCCACAGCCACCTAGCCGGCGAGTGACGGCCTGGACCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS CCA 72 bp | TCAAGGGCTCGCAGGCTTCCCTGGATGAGAATCACCTaGAGGGCCTGTGCAAGGACTGCTACCACCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SRARRLPWMRIT*RACARTATTSP Trigger: GGGGCTGGTGGTAGCAGTCCTTGCACAGGCCCTCCAGGTGATTCTCATCCAGGGAAGCCTGCGAGCCCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CCA 72 bp | CATGTGAGCCTCTTCCCCATGGGGCAGCTCACAACATaGCAGCCCATCTCCATCTGTTCGGGCCTCGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: HVSLFPMGQLTT*QPISICSGLGR Trigger: GCGACCGAGGCCCGAACAGATGGAGATGGGCTGCCATGTTGTGAGCTGCCCCATGGGGAAGAGGCTCACATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653778.1 ENST00000666526.1 |
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| CDS CCA 72 bp | AATGGGGAGGGTCCAGGCCGTCACTCGCCGGCTAGGTaGCTGTGGCAAGTCTCTGTAGTAAAGGGGCCACGA | + |
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Preference number: 6 (lower is better) Translates to: NGEGPGRHSPAR*LWQVSVVKGPR Trigger: TCGTGGCCCCTTTACTACAGAGACTTGCCACAGCCACCTAGCCGGCGAGTGACGGCCTGGACCCTCCCCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS CAA 90 bp | GTAGTGACAGCTTCTAGGGCTGATCCCCCATGGTGGGGCTGTCCTTaGAGCTCCTGCTCGGACACTGCTGGGATCCAAAGGCCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VVTASRADPPWWGCP*SSCSDTAGIQRPRS Trigger: GCTCCTGGGCCTTTGGATCCCAGCAGTGTCCGAGCAGGAGCTCAAAGGACAGCCCCACCATGGGGGATCAGCCCTAGAAGCTGTCACTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS TCA 72 bp | AACAGAAACACAGTGAAAGGCGTTCGGAGAGCCTCGTaGCTGCGGCACGGCGGCGAGCCGGGAACATCAGTG | + |
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Preference number: 6 (lower is better) Translates to: NRNTVKGVRRAS*LRHGGEPGTSV Trigger: CACTGATGTTCCCGGCTCGCCGCCGTGCCGCAGTCACGAGGCTCTCCGAACGCCTTTCACTGTGTTTCTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653778.1 ENST00000666526.1 |
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| CDS GCA 72 bp | TTCCTTCAGTCCAAGGGTCACGGTCCGGGGCCACTGTaGTGTTGTTGGCTCTCTCCCCCGGTGTTCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: FLQSKGHGPGPL*CCWLSPPVFLE Trigger: TTCCAGGAACACCGGGGGAGAGAGCCAACAACAGCACAGTGGCCCCGGACCGTGACCCTTGGACTGAAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS GCA 72 bp | CAGGCTTCCCTGGATGAGAATCACCTGGAGGGCCTGTaGAAGGACTGCTACCACCAGCCCCTGGGGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: QASLDENHLEGL*KDCYHQPLGVL Trigger: AAGAACCCCCAGGGGCTGGTGGTAGCAGTCCTTGCACAGGCCCTCCAGGTGATTCTCATCCAGGGAAGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS GCA 72 bp | CGTGACTGCGGCACGGCGGCGAGCCGGGAACATCAGTaGGTCCAGAGCAAAATGAACGAATGTACGCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: RDCGTAASREHQ*VQSKMNECTHD Trigger: GTCATGCGTACATTCGTTCATTTTGCTCTGGACGCACTGATGTTCCCGGCTCGCCGCCGTGCCGCAGTCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653778.1 ENST00000666526.1 |
||
| CDS TCA 72 bp | GTGGAAAGTCTCCAAGGCAGCCATTGTGGGGGCATCTaGAATCCCACCCAATATAGCCGGGCTGGTAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VESLQGSHCGGI*NPTQYSRAGRG Trigger: GCCCCTACCAGCCCGGCTATATTGGGTGGGATTTCAGATGCCCCCACAATGGCTGCCTTGGAGACTTTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS GCA 72 bp | ATGGTGGGGCTGTCCTTTGAGCTCCTGCTCGGACACTaGTGGGATCCAAAGGCCCAGGAGCCAGACTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: MVGLSFELLLGH*WDPKAQEPDCK Trigger: TTTACAGTCTGGCTCCTGGGCCTTTGGATCCCAGCAGTGTCCGAGCAGGAGCTCAAAGGACAGCCCCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CCA 72 bp | GATGTAGTGACAGCTTCTAGGGCTGATCCCCCATGGTaGGGCTGTCCTTTGAGCTCCTGCTCGGACACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DVVTASRADPPW*GCPLSSCSDTA Trigger: AGCAGTGTCCGAGCAGGAGCTCAAAGGACAGCCCCACCATGGGGGATCAGCCCTAGAAGCTGTCACTACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CCA 72 bp | GGAGATGTAGTGACAGCTTCTAGGGCTGATCCCCCATaGTGGGGCTGTCCTTTGAGCTCCTGCTCGGACACT | + |
|
Preference number: 6 (lower is better) Translates to: GDVVTASRADPP*WGCPLSSCSDT Trigger: AGTGTCCGAGCAGGAGCTCAAAGGACAGCCCCACCATGGGGGATCAGCCCTAGAAGCTGTCACTACATCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS TCA 72 bp | CGGCGAGCCGGGAACATCAGTGCGTCCAGAGCAAAATaGACGAATGTACGCATGACTCCTGGAGCGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RRAGNISASRAK*TNVRMTPGATF Trigger: GAAGGTCGCTCCAGGAGTCATGCGTACATTCGTTCATTTTGCTCTGGACGCACTGATGTTCCCGGCTCGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653778.1 ENST00000666526.1 |
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| CDS CAA 90 bp | AATTGCCCTCCACCAAAGGCAGAGCAAGGGGAGCGTTGTTGCTTCTaGAGGACCAGTGGAAAGTCTCCAAGGCAGCCATTGTGGGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: NCPPPKAEQGERCCF*RTSGKSPRQPLWGH Trigger: ATGCCCCCACAATGGCTGCCTTGGAGACTTTCCACTGGTCCTCAAGAAGCAACAACGCTCCCCTTGCTCTGCCTTTGGTGGAGGGCAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CAA 90 bp | GAGGAGGAATTGCCCTCCACCAAAGGCAGAGCAAGGGGAGCGTTGTaGCTTCTTGAGGACCAGTGGAAAGTCTCCAAGGCAGCCATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: EEELPSTKGRARGAL*LLEDQWKVSKAAIV Trigger: CACAATGGCTGCCTTGGAGACTTTCCACTGGTCCTCAAGAAGCAACAACGCTCCCCTTGCTCTGCCTTTGGTGGAGGGCAATTCCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
||
| CDS TCA 72 bp | AATATTCCACCTCAAGGGCTCGCAGGCTTCCCTGGATaGGAATCACCTGGAGGGCCTGTGCAAGGACTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: NIPPQGLAGFPG*ESPGGPVQGLL Trigger: TAGCAGTCCTTGCACAGGCCCTCCAGGTGATTCTCATCCAGGGAAGCCTGCGAGCCCTTGAGGTGGAATATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS TCA 72 bp | TCAGTGCGTCCAGAGCAAAATGAACGAATGTACGCATaGCTCCTGGAGCGACCTTCACGAGGGAAAGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SVRPEQNERMYA*LLERPSRGKAR Trigger: GCGCGCTTTCCCTCGTGAAGGTCGCTCCAGGAGTCATGCGTACATTCGTTCATTTTGCTCTGGACGCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653778.1 ENST00000666526.1 |
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| CDS GCA 72 bp | ATCATGCCAGTTGCCATGGGTCAGGAGTGCAGGCACTaGTTACCTGACTCTTCTGGCTTGGGGTCTGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: IMPVAMGQECRH*LPDSSGLGSVT Trigger: TGTGACAGACCCCAAGCCAGAAGAGTCAGGTAAGCAGTGCCTGCACTCCTGACCCATGGCAACTGGCATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666526.1 |
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| CDS CAA 72 bp | CCACCAAAGGCAGAGCAAGGGGAGCGTTGTTGCTTCTaGAGGACCAGTGGAAAGTCTCCAAGGCAGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: PPKAEQGERCCF*RTSGKSPRQPL Trigger: CAATGGCTGCCTTGGAGACTTTCCACTGGTCCTCAAGAAGCAACAACGCTCCCCTTGCTCTGCCTTTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
||
| CDS CAA 90 bp | AGAGAGGAGGAATTGCCCTCCACCAAAGGCAGAGCAAGGGGAGCGTaGTTGCTTCTTGAGGACCAGTGGAAAGTCTCCAAGGCAGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: REEELPSTKGRARGA*LLLEDQWKVSKAAI Trigger: AATGGCTGCCTTGGAGACTTTCCACTGGTCCTCAAGAAGCAACAACGCTCCCCTTGCTCTGCCTTTGGTGGAGGGCAATTCCTCCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
||
| CDS CAA 90 bp | GCCATGGGTCAGGAGTGCAGGCACTGCTTACCTGACTCTTCTGGCTaGGGGTCTGTCACAAGCTACAAATCAAAGTGTCAAGTGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AMGQECRHCLPDSSG*GSVTSYKSKCQVGC Trigger: GCAGCCCACTTGACACTTTGATTTGTAGCTTGTGACAGACCCCAAGCCAGAAGAGTCAGGTAAGCAGTGCCTGCACTCCTGACCCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666526.1 |
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| CDS TCA 72 bp | TCAGGACAGGCCAGAGAGCATTTAGGACCGGCAACATaGACAGACACGGCTCTCTGGTGCTACAGTAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGQAREHLGPAT*TDTALWCYSSE Trigger: CTCACTACTGTAGCACCAGAGAGCCGTGTCTGTTCATGTTGCCGGTCCTAAATGCTCTCTGGCCTGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659575.1 |
||
| CDS TCA 72 bp | AGTTGCCATGGGTCAGGAGTGCAGGCACTGCTTACCTaGCTCTTCTGGCTTGGGGTCTGTCACAAGCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: SCHGSGVQALLT*LFWLGVCHKLQ Trigger: TTGTAGCTTGTGACAGACCCCAAGCCAGAAGAGTCAGGTAAGCAGTGCCTGCACTCCTGACCCATGGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666526.1 |
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| CDS CCA 72 bp | AACTTCACATTCCCATGGCTCCACATGGCAGAGTCCTaGGAATGGTGGACAAGACCCCAGTTTGGGGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: NFTFPWLHMAES*EWWTRPQFGGS Trigger: AGATCCCCCAAACTGGGGTCTTGTCCACCATTCCCAGGACTCTGCCATGTGGAGCCATGGGAATGTGAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CAA 72 bp | CCTGATATCCTGGCATGTAACACCTCTGTGGCCCTTTaGGTGCCTAGCATGCCTAGCACCATACCTGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: PDILACNTSVAL*VPSMPSTIPGT Trigger: TGTGCCAGGTATGGTGCTAGGCATGCTAGGCACCAAAAGGGCCACAGAGGTGTTACATGCCAGGATATCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449259.1 |
||
| CDS TCA 72 bp | GGTGATGCCGATGCTGCTGGCCCAGGGATTACACTTTaGGAACCACAGTTGTGGAGGTATTCACAGAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: GDADAAGPGITL*EPQLWRYSQKP Trigger: GGGTTTCTGTGAATACCTCCACAACTGTGGTTCTCAAAGTGTAATCCCTGGGCCAGCAGCATCGGCATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
||
| CDS TCA 72 bp | TTGCCTTCCTCAACATCACTCCACCTCCTTTCTCTATaGGCTCTTCCCATCCAGTGTGGCGTCTTCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPSSTSLHLLSL*ALPIQCGVFQQ Trigger: CTGCTGGAAGACGCCACACTGGATGGGAAGAGCTCATAGAGAAAGGAGGTGGAGTGATGTTGAGGAAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659575.1 |
||
| CDS GCA 72 bp | TTGTTCAGGCCACTGTTAGTCAGGTATACAGTTGTTTaGTGCCAATCCCATTCCACGAGGGTCCGCGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LFRPLLVRYTVV*CQSHSTRVRGF Trigger: GAAGCCGCGGACCCTCGTGGAATGGGATTGGCAGCAAACAACTGTATACCTGACTAACAGTGGCCTGAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS CCA 72 bp | CTGATATCCTGGCATGTAACACCTCTGTGGCCCTTTTaGTGCCTAGCATGCCTAGCACCATACCTGGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: LISWHVTPLWPF*CLACLAPYLAH Trigger: ATGTGCCAGGTATGGTGCTAGGCATGCTAGGCACCAAAAGGGCCACAGAGGTGTTACATGCCAGGATATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CCA 72 bp | CAAGGGCACCACCTTGTGATTTTACCCTTTCTCCTATaGGCAGGAAGCTCATTCACCTGCCGGTGGGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QGHHLVILPFLL*AGSSFTCRWEK Trigger: CTTTTCCCACCGGCAGGTGAATGAGCTTCCTGCCCATAGGAGAAAGGGTAAAATCACAAGGTGGTGCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CCA 72 bp | GCTGAAAGGAAGTGTGAGGTGAACTTCACATTCCCATaGCTCCACATGGCAGAGTCCTGGGAATGGTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: AERKCEVNFTFP*LHMAESWEWWT Trigger: TGTCCACCATTCCCAGGACTCTGCCATGTGGAGCCATGGGAATGTGAAGTTCACCTCACACTTCCTTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CCA 72 bp | CTTCCTGTGGGCCTTCCCTATGCTGGACTCTTCATCTaGAATACTCTCATCCCTCACCTCCACATGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LPVGLPYAGLFI*NTLIPHLHMSK Trigger: CTTGGACATGTGGAGGTGAGGGATGAGAGTATTCCAGATGAAGAGTCCAGCATAGGGAAGGCCCACAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CAA 72 bp | CCACCGTGCCCCTCGGAAGGTGGCAGCTGTTCTTTATaGCCTTCTGAGAATCCAAAACGACTGTTGCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPCPSEGGSCSL*PSENPKRLLPD Trigger: ATCTGGCAACAGTCGTTTTGGATTCTCAGAAGGCAATAAAGAACAGCTGCCACCTTCCGAGGGGCACGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CAA 90 bp | CATGAACTCCCTGATATCCTGGCATGTAACACCTCTGTGGCCCTTTaGGTGCCTAGCATGCCTAGCACCATACCTGGCACATACAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HELPDILACNTSVAL*VPSMPSTIPGTYKS Trigger: AGACTTGTATGTGCCAGGTATGGTGCTAGGCATGCTAGGCACCAAAAGGGCCACAGAGGTGTTACATGCCAGGATATCAGGGAGTTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CAA 90 bp | GAGCCAGACTGTAAATGGAGCTGGAGAAGTCCTGACTCTTCTGGCTaGGGGTCTGTCACAAGCTACAAATCAAAGTGTCAAGTGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EPDCKWSWRSPDSSG*GSVTSYKSKCQVGC Trigger: GCAGCCCACTTGACACTTTGATTTGTAGCTTGTGACAGACCCCAAGCCAGAAGAGTCAGGACTTCTCCAGCTCCATTTACAGTCTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653778.1 |
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| CDS TCA 72 bp | CCCCTCGGAAGGTGGCAGCTGTTCTTTATTGCCTTCTaGGAATCCAAAACGACTGTTGCCAGATTGCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PLGRWQLFFIAF*ESKTTVARLPA Trigger: AGCAGGCAATCTGGCAACAGTCGTTTTGGATTCTCAGAAGGCAATAAAGAACAGCTGCCACCTTCCGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS GCA 72 bp | CACCGTGCCCCTCGGAAGGTGGCAGCTGTTCTTTATTaGCTTCTGAGAATCCAAAACGACTGTTGCCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: HRAPRKVAAVLY*LLRIQNDCCQI Trigger: AATCTGGCAACAGTCGTTTTGGATTCTCAGAAGGCAATAAAGAACAGCTGCCACCTTCCGAGGGGCACGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS GCA 72 bp | ATATCCTGGCATGTAACACCTCTGTGGCCCTTTTGGTaGCTAGCATGCCTAGCACCATACCTGGCACATACA | + |
|
Preference number: 6 (lower is better) Translates to: ISWHVTPLWPFW*LACLAPYLAHT Trigger: TGTATGTGCCAGGTATGGTGCTAGGCATGCTAGGCACCAAAAGGGCCACAGAGGTGTTACATGCCAGGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS GCA 72 bp | TTCAGGCCACTGTTAGTCAGGTATACAGTTGTTTGCTaGCAATCCCATTCCACGAGGGTCCGCGGCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: FRPLLVRYTVVC*QSHSTRVRGFI Trigger: AATGAAGCCGCGGACCCTCGTGGAATGGGATTGGCAGCAAACAACTGTATACCTGACTAACAGTGGCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS CCA 72 bp | ATGAACTCCCTGATATCCTGGCATGTAACACCTCTGTaGCCCTTTTGGTGCCTAGCATGCCTAGCACCATAC | + |
|
Preference number: 6 (lower is better) Translates to: MNSLISWHVTPL*PFWCLACLAPY Trigger: GTATGGTGCTAGGCATGCTAGGCACCAAAAGGGCCACAGAGGTGTTACATGCCAGGATATCAGGGAGTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CAA 72 bp | TTTGTTCAGGCCACTGTTAGTCAGGTATACAGTTGTTaGCTGCCAATCCCATTCCACGAGGGTCCGCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FVQATVSQVYSC*LPIPFHEGPRL Trigger: AAGCCGCGGACCCTCGTGGAATGGGATTGGCAGCAAACAACTGTATACCTGACTAACAGTGGCCTGAACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS TCA 72 bp | CTATGCCATCAGTTCTTCACATATCTCAGGGATTCCTaGGAATATTCCACCTCAAGGGCTCGCAGGCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LCHQFFTYLRDS*EYSTSRARRLP Trigger: GGGAAGCCTGCGAGCCCTTGAGGTGGAATATTCTCAGGAATCCCTGAGATATGTGAAGAACTGATGGCATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS GCA 72 bp | GGAAATGAAATGCATGTGACTTGTGTTCCAGGAGCTTaGTGTCTGCAGGGGAGGTGTATGAGAAGTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GNEMHVTCVPGA*CLQGRCMRSVC Trigger: GCAGACACTTCTCATACACCTCCCCTGCAGACAGCAAGCTCCTGGAACACAAGTCACATGCATTTCATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS GCA 72 bp | CTGAAGTCCTTCCTGATTGATGATTGTCAATCAGATTaGTCTGGCAGAGAGATGAGCTGCTGCTGGGTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LKSFLIDDCQSD*SGREMSCCWVR Trigger: TCGGACCCAGCAGCAGCTCATCTCTCTGCCAGAGCAATCTGATTGACAATCATCAATCAGGAAGGACTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS CCA 72 bp | TACAGCACAATTCCTTCCTGTGGGCCTTCCCTATGCTaGACTCTTCATCTGGAATACTCTCATCCCTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: YSTIPSCGPSLC*TLHLEYSHPSP Trigger: AGGTGAGGGATGAGAGTATTCCAGATGAAGAGTCCAGCATAGGGAAGGCCCACAGGAAGGAATTGTGCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CCA 72 bp | TGGGGTCTGTCACAAGCTACAAATCAAAGTGTCAAGTaGGCTGCAGTCTCACATGAAGGCTTCACTGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WGLSQATNQSVK*AAVSHEGFTGE Trigger: TTCCCCAGTGAAGCCTTCATGTGAGACTGCAGCCCACTTGACACTTTGATTTGTAGCTTGTGACAGACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653778.1 ENST00000666526.1 ENST00000669631.1 |
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| CDS CAA 72 bp | CAGGAGTGCAGGCACTGCTTACCTGACTCTTCTGGCTaGGGGTCTGTCACAAGCTACAAATCAAAGTGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QECRHCLPDSSG*GSVTSYKSKCQ Trigger: TTGACACTTTGATTTGTAGCTTGTGACAGACCCCAAGCCAGAAGAGTCAGGTAAGCAGTGCCTGCACTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666526.1 |
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| CDS TCA 72 bp | AGGACCTTGAGATTTGGAGACAAGGGCACCACCTTGTaGTTTTACCCTTTCTCCTATGGGCAGGAAGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RTLRFGDKGTTL*FYPFSYGQEAH Trigger: ATGAGCTTCCTGCCCATAGGAGAAAGGGTAAAATCACAAGGTGGTGCCCTTGTCTCCAAATCTCAAGGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS TCA 72 bp | AGAGTCACCTTTACTCACCTGCCATCCAGAGGACCTTaGGATTTGGAGACAAGGGCACCACCTTGTGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: RVTFTHLPSRGP*DLETRAPPCDF Trigger: AAAATCACAAGGTGGTGCCCTTGTCTCCAAATCTCAAGGTCCTCTGGATGGCAGGTGAGTAAAGGTGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS TCA 72 bp | TGTCAGCAGGATTCAGTTCCTCATAGGCTATTGGACTaGGGGTCTCAGTTCTTCACTGGCTGTTTTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CQQDSVPHRLLD*GSQFFTGCFLE Trigger: CTCCAGAAAACAGCCAGTGAAGAACTGAGACCCTCAGTCCAATAGCCTATGAGGAACTGAATCCTGCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653778.1 ENST00000666526.1 ENST00000669631.1 |
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| CDS TCA 72 bp | TACAAATCAAAGTGTCAAGTGGGCTGCAGTCTCACATaGAGGCTTCACTGGGGAAGGATCTGCTTCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: YKSKCQVGCSLT*RLHWGRICFQA Trigger: AGCTTGGAAGCAGATCCTTCCCCAGTGAAGCCTTCATGTGAGACTGCAGCCCACTTGACACTTTGATTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653778.1 ENST00000666526.1 ENST00000669631.1 |
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| CDS TCA 72 bp | ATGCCACAGTCATTAACATGCCCCCGCCAGCCTCACTaGCTTACAATAAAGGTTCATTTTACGCTCATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: MPQSLTCPRQPH*LTIKVHFTLMP Trigger: CGGCATGAGCGTAAAATGAACCTTTATTGTAAGTCAGTGAGGCTGGCGGGGGCATGTTAATGACTGTGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669631.1 |
||
| CDS CCA 72 bp | CAAGGGCACCACCTTGTGATTTTACCCTTTCTCCTATaGGCAGGAAGCTCATTCACCTGGAAAATAGTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: QGHHLVILPFLL*AGSSFTWKIVA Trigger: CGCAACTATTTTCCAGGTGAATGAGCTTCCTGCCCATAGGAGAAAGGGTAAAATCACAAGGTGGTGCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653778.1 |
||
| CDS CAA 90 bp | AGCTTTACCCCTGGATCCACCCATGTAAGGTTTCCATTATTACATTaGAGAAGAGGAGGAGCTACTTTTCCAAGGCAAGTAGGAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFTPGSTHVRFPLLH*RRGGATFPRQVGAS Trigger: GGAGGCTCCTACTTGCCTTGGAAAAGTAGCTCCTCCTCTTCTCAAATGTAATAATGGAAACCTTACATGGGTGGATCCAGGGGTAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669631.1 |
||
| CDS TCA 72 bp | GGCTGTCATGGTTCTAAGTGTCCAGTTCAAATAAGGTaGCATCCAGCAGAGGAAGACAGGCCAGAATTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GCHGSKCPVQIR*HPAEEDRPELH Trigger: ATGCAATTCTGGCCTGTCTTCCTCTGCTGGATGTCACCTTATTTGAACTGGACACTTAGAACCATGACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669631.1 |
||
| CDS CCA 72 bp | ATGGTTGTCAGCAGGATTCAGTTCCTCATAGGCTATTaGACTGAGGGTCTCAGTTCTTCACTGGCTGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: MVVSRIQFLIGY*TEGLSSSLAVF Trigger: GAAAACAGCCAGTGAAGAACTGAGACCCTCAGTCCAATAGCCTATGAGGAACTGAATCCTGCTGACAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653778.1 ENST00000666526.1 ENST00000669631.1 |
||
| CDS CCA 72 bp | GTAAATGGAGCTGGAGAAGTCCTGACTCTTCTGGCTTaGGGTCTGTCACAAGCTACAAATCAAAGTGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VNGAGEVLTLLA*GLSQATNQSVK Trigger: CTTGACACTTTGATTTGTAGCTTGTGACAGACCCCAAGCCAGAAGAGTCAGGACTTCTCCAGCTCCATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653778.1 |
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| CDS CAA 72 bp | AAAATCGGGGTCCTTCATGATGCCAGGGTTGGCTCATaGCAGTTTATGAGCATGAGCTATGGCAGAGACATA | + |
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Preference number: 6 (lower is better) Translates to: KIGVLHDARVGS*QFMSMSYGRDI Trigger: TATGTCTCTGCCATAGCTCATGCTCATAAACTGCAATGAGCCAACCCTGGCATCATGAAGGACCCCGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS CAA 90 bp | AGTCTGAAGGAGACCATCAAATGTAGTATTTACGTTTCAAGATTCTaGGTCCTCCCTCCCCTGGTCAGCTTGGGGTCTATAGAATGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SLKETIKCSIYVSRF*VLPPLVSLGSIEWL Trigger: CAACCATTCTATAGACCCCAAGCTGACCAGGGGAGGGAGGACCAAGAATCTTGAAACGTAAATACTACATTTGATGGTCTCCTTCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS GCA 72 bp | CACAGAGATAGTAAGGAAAAGTTAATCATCTCCATCTaGCTGACTGTAATCCCACTGCCCCAGGTAACCACT | + |
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Preference number: 6 (lower is better) Translates to: HRDSKEKLIISI*LTVIPLPQVTT Trigger: AGTGGTTACCTGGGGCAGTGGGATTACAGTCAGGCAGATGGAGATGATTAACTTTTCCTTACTATCTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS CCA 72 bp | ATGCCCTTAAAGAAGTCCATATTCAACATGTCAGCTTaGTTCTCTGGCTCACTCCCTCATAGACACAGATGG | + |
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Preference number: 6 (lower is better) Translates to: MPLKKSIFNMSA*FSGSLPHRHRW Trigger: CCATCTGTGTCTATGAGGGAGTGAGCCAGAGAACCAAGCTGACATGTTGAATATGGACTTCTTTAAGGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS CAA 72 bp | GAGACCATCAAATGTAGTATTTACGTTTCAAGATTCTaGGTCCTCCCTCCCCTGGTCAGCTTGGGGTCTATA | + |
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Preference number: 6 (lower is better) Translates to: ETIKCSIYVSRF*VLPPLVSLGSI Trigger: TATAGACCCCAAGCTGACCAGGGGAGGGAGGACCAAGAATCTTGAAACGTAAATACTACATTTGATGGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CAA 90 bp | GGTGGCAGCTGTTCTTTATTGCCTTCTGAGAATCCAAAACGACTGTaGCCAGATTGCCTGCTTCTCCAAAAGAGTTTGAAATCTGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: GGSCSLLPSENPKRL*PDCLLLQKSLKSGV Trigger: AACTCCAGATTTCAAACTCTTTTGGAGAAGCAGGCAATCTGGCAACAGTCGTTTTGGATTCTCAGAAGGCAATAAAGAACAGCTGCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS TCA 72 bp | TTCTTCCCCATCTCATCTTCACTCCAGGATTCAAGATaGTGGAGTAGCTTTCATCTCCAGCCTTCTCATAAG | + |
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Preference number: 6 (lower is better) Translates to: FFPISSSLQDSR*WSSFHLQPSHK Trigger: CTTATGAGAAGGCTGGAGATGAAAGCTACTCCATCATCTTGAATCCTGGAGTGAAGATGAGATGGGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS CCA 72 bp | TCTAAGACAGCATTAATACAGCACAATTCCTTCCTGTaGGCCTTCCCTATGCTGGACTCTTCATCTGGAATA | + |
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Preference number: 6 (lower is better) Translates to: SKTALIQHNSFL*AFPMLDSSSGI Trigger: TATTCCAGATGAAGAGTCCAGCATAGGGAAGGCCCACAGGAAGGAATTGTGCTGTATTAATGCTGTCTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CCA 72 bp | ACAGGAATTAGCTTGGATTTCCTGACTCTTCTGGCTTaGGGTCTGTCACAAGCTACAAATCAAAGTGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: TGISLDFLTLLA*GLSQATNQSVK Trigger: CTTGACACTTTGATTTGTAGCTTGTGACAGACCCCAAGCCAGAAGAGTCAGGAAATCCAAGCTAATTCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS GCA 72 bp | CTACAGCTGATAGTTGCCCATTTATTCATTGATCCTTaGTTTCAACATGTATTGAGAGCCCATGTTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LQLIVAHLFIDP*FQHVLRAHVGW Trigger: CCACCCAACATGGGCTCTCAATACATGTTGAAAGCAAGGATCAATGAATAAATGGGCAACTATCAGCTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CAA 72 bp | TTTGTTTTCTTAGGAAACAAAATGCCATGGGTCCAGTaGAAGTTGCCTTCCTCAACATCACTCCACCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FVFLGNKMPWVQ*KLPSSTSLHLL Trigger: AAGGAGGTGGAGTGATGTTGAGGAAGGCAACTTCAACTGGACCCATGGCATTTTGTTTCCTAAGAAAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS TCA 72 bp | CTTGGGGTCTATAGAATGGTTGAGGTAATTTTTGGATaGTTTCTTGGGAGAGTGCTATGCTGTAAGCCTACA | + |
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Preference number: 6 (lower is better) Translates to: LGVYRMVEVIFG*FLGRVLCCKPT Trigger: TGTAGGCTTACAGCATAGCACTCTCCCAAGAAATCATCCAAAAATTACCTCAACCATTCTATAGACCCCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS GCA 72 bp | GCTAACAGTTTAACAAACGTCTTTCTGCACCTTTTCTaGTGCTCACACAAACATACACAGAGGCTTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: ANSLTNVFLHLF*CSHKHTQRLHH Trigger: ATGATGAAGCCTCTGTGTATGTTTGTGTGAGCAGCAGAAAAGGTGCAGAAAGACGTTTGTTAAACTGTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS TCA 72 bp | GACTGTTGCCAGATTGCCTGCTTCTCCAAAAGAGTTTaGAATCTGGAGTTGCATGTAAAATGTCACCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: DCCQIACFSKRV*NLELHVKCHQK Trigger: TTTTTGGTGACATTTTACATGCAACTCCAGATTTCAAACTCTTTTGGAGAAGCAGGCAATCTGGCAACAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS TCA 72 bp | CTTTCAATACTCTCTCTCTCTCTCTCTGAAGTAATTTaGGTATCTGTGTCTGGCAATGGAAATGCCTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: LSILSLSLSEVI*VSVSGNGNASK Trigger: CTTAGAGGCATTTCCATTGCCAGACACAGATACTCAAATTACTTCAGAGAGAGAGAGAGAGAGTATTGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS TCA 72 bp | CACAGAAACCCTTTCAATACTCTCTCTCTCTCTCTCTaGAGTAATTTGAGTATCTGTGTCTGGCAATGGAAA | + |
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Preference number: 6 (lower is better) Translates to: HRNPFNTLSLSL*SNLSICVWQWK Trigger: TTTCCATTGCCAGACACAGATACTCAAATTACTTCAGAGAGAGAGAGAGAGAGTATTGAAAGGGTTTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449259.1 ENST00000653778.1 |
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| CDS CCA 72 bp | CATTCTGTTGCTATACACCACAAAGAGCTTTACCCCTaGATCCACCCATGTAAGGTTTCCATTATTACATTT | + |
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Preference number: 6 (lower is better) Translates to: HSVAIHHKELYP*IHPCKVSIITF Trigger: AAATGTAATAATGGAAACCTTACATGGGTGGATCCAGGGGTAAAGCTCTTTGTGGTGTATAGCAACAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669631.1 |
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| CDS CAA 72 bp | TGTTCTTTATTGCCTTCTGAGAATCCAAAACGACTGTaGCCAGATTGCCTGCTTCTCCAAAAGAGTTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: CSLLPSENPKRL*PDCLLLQKSLK Trigger: TTTCAAACTCTTTTGGAGAAGCAGGCAATCTGGCAACAGTCGTTTTGGATTCTCAGAAGGCAATAAAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS GCA 72 bp | TATGCACCATGTTTGCTTAAAGTTTCACACACACACTaGATAAGCTTTTTCTTTCCCTCACTATGTCATGAA | + |
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Preference number: 6 (lower is better) Translates to: YAPCLLKVSHTH*ISFFFPSLCHE Trigger: TTCATGACATAGTGAGGGAAAGAAAAAGCTTATGCAGTGTGTGTGTGAAACTTTAAGCAAACATGGTGCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449259.1 |
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| CDS CAA 72 bp | CCCCATAAACAACACAACATATTGTTTATGGGAGTTTaGGATTTCGGATTTTATGGGCATGATATCATACTG | + |
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Preference number: 6 (lower is better) Translates to: PHKQHNILFMGV*DFGFYGHDIIL Trigger: CAGTATGATATCATGCCCATAAAATCCGAAATCCAAAACTCCCATAAACAATATGTTGTGTTGTTTATGGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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| CDS CCA 72 bp | CCCATAAACAACACAACATATTGTTTATGGGAGTTTTaGATTTCGGATTTTATGGGCATGATATCATACTGT | + |
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Preference number: 6 (lower is better) Translates to: PINNTTYCLWEF*ISDFMGMISYC Trigger: ACAGTATGATATCATGCCCATAAAATCCGAAATCCAAAACTCCCATAAACAATATGTTGTGTTGTTTATGGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659575.1 |
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