Pregenerated sensors for LINC02244 (Homo sapiens)
Ensembl gene IDs: ENSG00000259590Ensembl transcript IDs: ENST00000561362.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 72 bp | TGGATAGACCGACACTCCTTCCAGAAGCCAGGGAACTaGTGTCGCTGTGGCTGTAAAACAGATGAAAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: WIDRHSFQKPGN*CRCGCKTDESS Trigger: ACTGCTTTCATCTGTTTTACAGCCACAGCGACAGCAGTTCCCTGGCTTCTGGAAGGAGTGTCGGTCTATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561362.1 |
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| CDS CAA 72 bp | TGGATGACAGACTTTACATATCTGTTAGTACATTTTTaGGATAGACCGACACTCCTTCCAGAAGCCAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WMTDFTYLLVHF*DRPTLLPEARE Trigger: TTCCCTGGCTTCTGGAAGGAGTGTCGGTCTATCCAAAAAATGTACTAACAGATATGTAAAGTCTGTCATCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561362.1 |
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| CDS GCA 72 bp | ATTGAACTCCTATTTCATACCGTAGGCAAAATTTGCTaGAAATGGATGACAGACTTTACATATCTGTTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: IELLFHTVGKIC*KWMTDFTYLLV Trigger: TACTAACAGATATGTAAAGTCTGTCATCCATTTGCAGCAAATTTTGCCTACGGTATGAAATAGGAGTTCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561362.1 |
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| CDS GCA 72 bp | CAAATTGAACTCCTATTTCATACCGTAGGCAAAATTTaGTGCAAATGGATGACAGACTTTACATATCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: QIELLFHTVGKI*CKWMTDFTYLL Trigger: TAACAGATATGTAAAGTCTGTCATCCATTTGCAGCAAATTTTGCCTACGGTATGAAATAGGAGTTCAATTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561362.1 |
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| CDS CCA 72 bp | CTCCTATTTCATACCGTAGGCAAAATTTGCTGCAAATaGATGACAGACTTTACATATCTGTTAGTACATTTT | + |
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Preference number: 6 (lower is better) Translates to: LLFHTVGKICCK*MTDFTYLLVHF Trigger: AAAATGTACTAACAGATATGTAAAGTCTGTCATCCATTTGCAGCAAATTTTGCCTACGGTATGAAATAGGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561362.1 |
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