Pregenerated sensors for LINC02238 (Homo sapiens)

Ensembl gene IDs: ENSG00000223479

Ensembl transcript IDs: ENST00000424953.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TCAGAGTTCAAGCAAGCTTCCATCATGGATTTTCCCATCTTTCACTaGTTTAGTCCTAAGAGGCAACTTCTGACCACAGATATCCTGTTT	+
Preference number: 5 (lower is better) Translates to: SEFKQASIMDFPIFH*FSPKRQLLTTDILF Trigger: AAACAGGATATCTGTGGTCAGAAGTTGCCTCTTAGGACTAAACCAGTGAAAGATGGGAAAATCCATGATGGAAGCTTGCTTGAACTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424953.1
CDS CCA 90 bp	GTCTCTTCTTGTCATTGTCATGGTGATTTTCAACTTTCATGGTACTaGCTGGACTGTCATTTAATATGGAAATTGGATTACAAAGAAGCC	+
Preference number: 5 (lower is better) Translates to: VSSCHCHGDFQLSWY*LDCHLIWKLDYKEA Trigger: GGCTTCTTTGTAATCCAATTTCCATATTAAATGACAGTCCAGCCAGTACCATGAAAGTTGAAAATCACCATGACAATGACAAGAAGAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424953.1
CDS CAA 72 bp	ATGGAGAAGTGGGAGAGTGGCCCACCAATCAACTTCTaGGCTCCTGAGAACCAGGAAGTTACAGATGTAGGA	+
Preference number: 6 (lower is better) Translates to: MEKWESGPPINF*APENQEVTDVG Trigger: TCCTACATCTGTAACTTCCTGGTTCTCAGGAGCCAAGAAGTTGATTGGTGGGCCACTCTCCCACTTCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424953.1
CDS CCA 72 bp	GTGCAGGCTTTATTTGATGGTCATAAAATGGAGAAGTaGGAGAGTGGCCCACCAATCAACTTCTTGGCTCCT	+
Preference number: 6 (lower is better) Translates to: VQALFDGHKMEK*ESGPPINFLAP Trigger: AGGAGCCAAGAAGTTGATTGGTGGGCCACTCTCCCACTTCTCCATTTTATGACCATCAAATAAAGCCTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424953.1
CDS CCA 72 bp	CCAGTGTTTCTTCAGAGTTCAAGCAAGCTTCCATCATaGATTTTCCCATCTTTCACTGGTTTAGTCCTAAGA	+
Preference number: 6 (lower is better) Translates to: PVFLQSSSKLPS*IFPSFTGLVLR Trigger: TCTTAGGACTAAACCAGTGAAAGATGGGAAAATCCATGATGGAAGCTTGCTTGAACTCTGAAGAAACACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424953.1
CDS CAA 90 bp	TTTCAACTTTCATGGTACTGGCTGGACTGTCATTTAATATGGAAATaGGATTACAAAGAAGCCAGTGTTTCTTCAGAGTTCAAGCAAGCT	+
Preference number: 6 (lower is better) Translates to: FQLSWYWLDCHLIWK*DYKEASVSSEFKQA Trigger: AGCTTGCTTGAACTCTGAAGAAACACTGGCTTCTTTGTAATCCAATTTCCATATTAAATGACAGTCCAGCCAGTACCATGAAAGTTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424953.1
CDS CCA 72 bp	TGTCATTGTCATGGTGATTTTCAACTTTCATGGTACTaGCTGGACTGTCATTTAATATGGAAATTGGATTAC	+
Preference number: 6 (lower is better) Translates to: CHCHGDFQLSWY*LDCHLIWKLDY Trigger: GTAATCCAATTTCCATATTAAATGACAGTCCAGCCAGTACCATGAAAGTTGAAAATCACCATGACAATGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424953.1
CDS CCA 72 bp	TCTTCTTGTCATTGTCATGGTGATTTTCAACTTTCATaGTACTGGCTGGACTGTCATTTAATATGGAAATTG	+
Preference number: 6 (lower is better) Translates to: SSCHCHGDFQLS*YWLDCHLIWKL Trigger: CAATTTCCATATTAAATGACAGTCCAGCCAGTACCATGAAAGTTGAAAATCACCATGACAATGACAAGAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424953.1

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