Pregenerated sensors for LINC02237 (Homo sapiens)
Ensembl gene IDs: ENSG00000253434Ensembl transcript IDs: ENST00000517308.2, ENST00000521753.5, ENST00000521904.5, ENST00000522390.2, ENST00000524236.2, ENST00000650619.1, ENST00000655458.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGCGGCTCCAGACGGGCGGTTGCTGCCATCACTAGGATGTATCACTaGAAATGCCTTGATAAAAGGGACCACAGGAGCTCTCTTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGSRRAVAAITRMYH*KCLDKRDHRSSLVL Trigger: GAGGACAAGAGAGCTCCTGTGGTCCCTTTTATCAAGGCATTTGCAGTGATACATCCTAGTGATGGCAGCAACCGCCCGTCTGGAGCCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521904.5 |
||
| CDS GCA 90 bp | TCCAGACGGGCGGTTGCTGCCATCACTAGGATGTATCACTGCAAATaGCTTGATAAAAGGGACCACAGGAGCTCTCTTGTCCTCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRRAVAAITRMYHCK*LDKRDHRSSLVLFP Trigger: AGGAAAGAGGACAAGAGAGCTCCTGTGGTCCCTTTTATCAAGGCATTTGCAGTGATACATCCTAGTGATGGCAGCAACCGCCCGTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521904.5 |
||
| CDS GCA 90 bp | AATACAACTGTCTCAGGGCCCTTAGGTGCTAAAGCTCAAGGCTTCTaGAAGAACTCGATGATTCAGCTGACTGCCTCTAGTAGACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NTTVSGPLGAKAQGF*KNSMIQLTASSRQS Trigger: GCTTTGTCTACTAGAGGCAGTCAGCTGAATCATCGAGTTCTTGCAGAAGCCTTGAGCTTTAGCACCTAAGGGCCCTGAGACAGTTGTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS TCA 90 bp | CATGCAACATTCCCTATGCATCTTTCTTCCCTCAGAATGATGAGATaGGTGCCACATGGATCTGTGCATGCAGAAAGATTGTTGCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: HATFPMHLSSLRMMR*VPHGSVHAERLLHR Trigger: TCGGTGCAACAATCTTTCTGCATGCACAGATCCATGTGGCACTCATCTCATCATTCTGAGGGAAGAAAGATGCATAGGGAATGTTGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000517308.2 ENST00000522390.2 ENST00000524236.2 ENST00000650619.1 ENST00000655458.1 |
||
| CDS CCA 90 bp | CAATGGGCTCTCTCCCTAAGCTTCACCAATACTAGGAGCACCATTTaGAGTCTCAGTCTTTTTATCCCTGAAAGTGCAGAGTTTCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QWALSLSFTNTRSTI*SLSLFIPESAEFLL Trigger: CAAAAGAAACTCTGCACTTTCAGGGATAAAAAGACTGAGACTCCAAATGGTGCTCCTAGTATTGGTGAAGCTTAGGGAGAGAGCCCATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS GCA 90 bp | TGGCTGAAGTGTACTCCAATGTGCAAATGTACAACATTTTCCTTGTaGATTCATCTTGATAAAAGGGACCACAGGAGCTCTCTTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WLKCTPMCKCTTFSL*IHLDKRDHRSSLVL Trigger: GAGGACAAGAGAGCTCCTGTGGTCCCTTTTATCAAGATGAATGCACAAGGAAAATGTTGTACATTTGCACATTGGAGTACACTTCAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000521753.5 ENST00000524236.2 |
||
| CDS GCA 90 bp | TTCCTCCCCTCCGGACATACTCGTCCCATGAAGATAACTGATGACTaGACAACTCTGTTGTTGCAAATGACAGCATCTCATTCTTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: FLPSGHTRPMKITDD*TTLLLQMTASHSFY Trigger: ATAAAAAGAATGAGATGCTGTCATTTGCAACAACAGAGTTGTGCAGTCATCAGTTATCTTCATGGGACGAGTATGTCCGGAGGGGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS GCA 90 bp | TTCTTCCCTCAGAATGATGAGATGAGTGCCACATGGATCTGTGCATaGAGAAAGATTGTTGCACCGAAGAAGAGGAACTCCAAATTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FFPQNDEMSATWICA*RKIVAPKKRNSKLK Trigger: TTTTAATTTGGAGTTCCTCTTCTTCGGTGCAACAATCTTTCTGCATGCACAGATCCATGTGGCACTCATCTCATCATTCTGAGGGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000517308.2 ENST00000522390.2 ENST00000524236.2 ENST00000650619.1 ENST00000655458.1 |
||
| CDS GCA 90 bp | CACAACCTATGTTTCCTGGGTAAACTGCCATCCTCTTTTCTCTCGTaGTTTATTGTTTTCTGTGGGTTCTGCAGAAATAACCACATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HNLCFLGKLPSSFLS*FIVFCGFCRNNHMQ Trigger: TTGCATGTGGTTATTTCTGCAGAACCCACAGAAAACAATAAAGCACGAGAGAAAAGAGGATGGCAGTTTACCCAGGAAACATAGGTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517308.2 ENST00000524236.2 |
||
| CDS TCA 90 bp | CCATCATTATGGGAAGACAGCATTCTGTTCTTCATTGCTCTGAATTaGGAGTATCATTGCAAAGCTTTGCACAACCTATGTTTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSLWEDSILFFIALN*EYHCKALHNLCFLG Trigger: ACCCAGGAAACATAGGTTGTGCAAAGCTTTGCAATGATACTCTCAATTCAGAGCAATGAAGAACAGAATGCTGTCTTCCCATAATGATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000517308.2 ENST00000522390.2 ENST00000524236.2 ENST00000650619.1 ENST00000655458.1 |
||
| CDS GCA 90 bp | AGTATCATTGCAAAGCTTTGCACAACCTATGTTTCCTGGGTAAACTaGCATCCTCTTTTCTCTCGTGCTTTATTGTTTTCTGTGGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIIAKLCTTYVSWVN*HPLFSRALLFSVGS Trigger: AGAACCCACAGAAAACAATAAAGCACGAGAGAAAAGAGGATGGCAGTTTACCCAGGAAACATAGGTTGTGCAAAGCTTTGCAATGATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000517308.2 ENST00000522390.2 ENST00000524236.2 ENST00000650619.1 ENST00000655458.1 |
||
| CDS TCA 90 bp | GAATGCCATCATTATGGGAAGACAGCATTCTGTTCTTCATTGCTCTaGATTGAGAGTATCATTGCAAAGCTTTGCACAACCTATGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ECHHYGKTAFCSSLL*IESIIAKLCTTYVS Trigger: GGAAACATAGGTTGTGCAAAGCTTTGCAATGATACTCTCAATTCAGAGCAATGAAGAACAGAATGCTGTCTTCCCATAATGATGGCATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000517308.2 ENST00000522390.2 ENST00000524236.2 ENST00000650619.1 ENST00000655458.1 |
||
| CDS TCA 90 bp | CTTACAATATTTATGGTTATGGTGCAACTAAGTAGGGACAGATTATaGAGGAATTCCCACCTTATTCTCAGTTTTGTCTGGTTCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTIFMVMVQLSRDRL*RNSHLILSFVWFTL Trigger: GAGCGTGAACCAGACAAAACTGAGAATAAGGTGGGAATTCCTTCATAATCTGTCCCTACTTAGTTGCACCATAACCATAAATATTGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522390.2 ENST00000655458.1 |
||
| CDS GCA 90 bp | CACAACCTATGTTTCCTGGGTAAACTGCCATCCTCTTTTCTCTCGTaGTTTATTGTTTTCTGTGGGTTCTGCCTAATAACATGTATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HNLCFLGKLPSSFLS*FIVFCGFCLITCIK Trigger: TTTTATACATGTTATTAGGCAGAACCCACAGAAAACAATAAAGCACGAGAGAAAAGAGGATGGCAGTTTACCCAGGAAACATAGGTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522390.2 |
||
| CDS CCA 90 bp | CTGCACAACTCTGTTGTTGCAAATGACAGCATCTCATTCTTTTTATaGCTGAAGTGTACTCCAATGTGCAAATGTACAACATTTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHNSVVANDSISFFL*LKCTPMCKCTTFSL Trigger: CAAGGAAAATGTTGTACATTTGCACATTGGAGTACACTTCAGCCATAAAAAGAATGAGATGCTGTCATTTGCAACAACAGAGTTGTGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS TCA 90 bp | CTTCAACTGTTGTTGCAAATGACAGCATCTCATTCTTTTTATGGCTaGAGTGTACTCCAATGTGCAAATGTACAACATTTTCCTTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQLLLQMTASHSFYG*SVLQCANVQHFPCA Trigger: TGCACAAGGAAAATGTTGTACATTTGCACATTGGAGTACACTTCAGCCATAAAAAGAATGAGATGCTGTCATTTGCAACAACAGTTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000524236.2 |
||
| CDS TCA 90 bp | ACAACTCTGTTGTTGCAAATGACAGCATCTCATTCTTTTTATGGCTaGAGTGTACTCCAATGTGCAAATGTACAACATTTTCCTTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TTLLLQMTASHSFYG*SVLQCANVQHFPCA Trigger: TGCACAAGGAAAATGTTGTACATTTGCACATTGGAGTACACTTCAGCCATAAAAAGAATGAGATGCTGTCATTTGCAACAACAGAGTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS GCA 90 bp | TTCTTGATGGATAATGTGCACTTGAGAGAAATAGAAATAACCACATaGAACATTCCCTATGCATCTTTCTTCCCTCAGAATGATGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FLMDNVHLREIEITT*NIPYASFFPQNDEM Trigger: CATCTCATCATTCTGAGGGAAGAAAGATGCATAGGGAATGTTGCATGTGGTTATTTCTATTTCTCTCAAGTGCACATTATCCATCAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522390.2 ENST00000655458.1 |
||
| CDS GCA 90 bp | CTTCATTTCAAGAAAACATATTGCCATGGTGTAGAAATAACCACATaGAACATTCCCTATGCATCTTTCTTCCCTCAGAATGATGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LHFKKTYCHGVEITT*NIPYASFFPQNDEM Trigger: CATCTCATCATTCTGAGGGAAGAAAGATGCATAGGGAATGTTGCATGTGGTTATTTCTACACCATGGCAATATGTTTTCTTGAAATGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650619.1 |
||
| CDS GCA 90 bp | AGCCCTTTTTGTTCAGGTGTTACTTTGATATTATTCCTGAGGAGGTaGATTATCAAAAAGCATGAGGATTACTTTCAATTTCCCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPFCSGVTLILFLRR*IIKKHEDYFQFPSP Trigger: AGGACTGGGAAATTGAAAGTAATCCTCATGCTTTTTGATAATGCACCTCCTCAGGAATAATATCAAAGTAACACCTGAACAAAAAGGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000650619.1 |
||
| CDS TCA 90 bp | ATATTATATTGGCTGACCTTAATCTACAGATTGATTGTGATATCTTaGAGATGGCCTTTCGTGACAATTCACACATATATCTCCCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILYWLTLIYRLIVIS*RWPFVTIHTYISLS Trigger: TGAGAGGGAGATATATGTGTGAATTGTCACGAAAGGCCATCTTCAAGATATCACAATCAATCTGTAGATTAAGGTCAGCCAATATAATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522390.2 ENST00000655458.1 |
||
| CDS CAA 72 bp | GCCATAGGGCGTATAGGTCTGGAGTCACCCTTGCAGTaGCATCTGGAGGGAGGGGCTCTTGCCCCGCGACTT | + |
|
Preference number: 6 (lower is better) Translates to: AIGRIGLESPLQ*HLEGGALAPRL Trigger: AAGTCGCGGGGCAAGAGCCCCTCCCTCCAGATGCAACTGCAAGGGTGACTCCAGACCTATACGCCCTATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521904.5 |
||
| CDS CAA 72 bp | GACGACGTCTTCCCAACCGCGGCTCCAGACGGGCGGTaGCTGCCATCACTAGGATGTATCACTGCAAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: DDVFPTAAPDGR*LPSLGCITANA Trigger: GGCATTTGCAGTGATACATCCTAGTGATGGCAGCAACCGCCCGTCTGGAGCCGCGGTTGGGAAGACGTCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521904.5 |
||
| CDS CAA 72 bp | TACAGTGCCATAGGGCGTATAGGTCTGGAGTCACCCTaGCAGTTGCATCTGGAGGGAGGGGCTCTTGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: YSAIGRIGLESP*QLHLEGGALAP Trigger: CGGGGCAAGAGCCCCTCCCTCCAGATGCAACTGCAAGGGTGACTCCAGACCTATACGCCCTATGGCACTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521904.5 |
||
| CDS CAA 90 bp | CTTGCTGCAGACGACGTCTTCCCAACCGCGGCTCCAGACGGGCGGTaGCTGCCATCACTAGGATGTATCACTGCAAATGCCTTGATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LAADDVFPTAAPDGR*LPSLGCITANALIK Trigger: TTTTATCAAGGCATTTGCAGTGATACATCCTAGTGATGGCAGCAACCGCCCGTCTGGAGCCGCGGTTGGGAAGACGTCGTCTGCAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521904.5 |
||
| CDS GCA 72 bp | AGACGGGCGGTTGCTGCCATCACTAGGATGTATCACTaGAAATGCCTTGATAAAAGGGACCACAGGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRAVAAITRMYH*KCLDKRDHRSS Trigger: AGAGCTCCTGTGGTCCCTTTTATCAAGGCATTTGCAGTGATACATCCTAGTGATGGCAGCAACCGCCCGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521904.5 |
||
| CDS GCA 72 bp | GTCTCAGGGCCCTTAGGTGCTAAAGCTCAAGGCTTCTaGAAGAACTCGATGATTCAGCTGACTGCCTCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: VSGPLGAKAQGF*KNSMIQLTASS Trigger: ACTAGAGGCAGTCAGCTGAATCATCGAGTTCTTGCAGAAGCCTTGAGCTTTAGCACCTAAGGGCCCTGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS GCA 72 bp | GCGGTTGCTGCCATCACTAGGATGTATCACTGCAAATaGCTTGATAAAAGGGACCACAGGAGCTCTCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: AVAAITRMYHCK*LDKRDHRSSLV Trigger: GACAAGAGAGCTCCTGTGGTCCCTTTTATCAAGGCATTTGCAGTGATACATCCTAGTGATGGCAGCAACCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521904.5 |
||
| CDS CAA 90 bp | TGTCCATGTCCCTCAGAACTCCCCTTCTTTCATGCAACAAGGTTGTaGAATACAACTGTCTCAGGGCCCTTAGGTGCTAAAGCTCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CPCPSELPFFHATRL*NTTVSGPLGAKAQG Trigger: GCCTTGAGCTTTAGCACCTAAGGGCCCTGAGACAGTTGTATTCAACAACCTTGTTGCATGAAAGAAGGGGAGTTCTGAGGGACATGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS CAA 90 bp | GACAGTGCTGGCACCCTGATCTCAGACGTCCAGACTCTAGAACTTTaGAGAGTTAGAATTGTGTTTGTCCTGATAATGTGGAGGAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DSAGTLISDVQTLEL*RVRIVFVLIMWRSL Trigger: CAAGCTCCTCCACATTATCAGGACAAACACAATTCTAACTCTCAAAAGTTCTAGAGTCTGGACGTCTGAGATCAGGGTGCCAGCACTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521904.5 |
||
| CDS CAA 90 bp | CAATGTCCATGTCCCTCAGAACTCCCCTTCTTTCATGCAACAAGGTaGTTGAATACAACTGTCTCAGGGCCCTTAGGTGCTAAAGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QCPCPSELPFFHATR*LNTTVSGPLGAKAQ Trigger: TTGAGCTTTAGCACCTAAGGGCCCTGAGACAGTTGTATTCAACAACCTTGTTGCATGAAAGAAGGGGAGTTCTGAGGGACATGGACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS GCA 72 bp | CAGAATGATGAGATGAGTGCCACATGGATCTGTGCATaGAGAAAGATTGTTGCACCGAAGAAGAGGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: QNDEMSATWICA*RKIVAPKKRNS Trigger: GGAGTTCCTCTTCTTCGGTGCAACAATCTTTCTGCATGCACAGATCCATGTGGCACTCATCTCATCATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000517308.2 ENST00000522390.2 ENST00000524236.2 ENST00000650619.1 ENST00000655458.1 |
||
| CDS CAA 72 bp | CCCTCAGAACTCCCCTTCTTTCATGCAACAAGGTTGTaGAATACAACTGTCTCAGGGCCCTTAGGTGCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: PSELPFFHATRL*NTTVSGPLGAK Trigger: TTTAGCACCTAAGGGCCCTGAGACAGTTGTATTCAACAACCTTGTTGCATGAAAGAAGGGGAGTTCTGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS CCA 72 bp | CTCTCCCTAAGCTTCACCAATACTAGGAGCACCATTTaGAGTCTCAGTCTTTTTATCCCTGAAAGTGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSLSFTNTRSTI*SLSLFIPESAE Trigger: CTCTGCACTTTCAGGGATAAAAAGACTGAGACTCCAAATGGTGCTCCTAGTATTGGTGAAGCTTAGGGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS TCA 72 bp | TTCCCTATGCATCTTTCTTCCCTCAGAATGATGAGATaGGTGCCACATGGATCTGTGCATGCAGAAAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: FPMHLSSLRMMR*VPHGSVHAERL Trigger: CAATCTTTCTGCATGCACAGATCCATGTGGCACTCATCTCATCATTCTGAGGGAAGAAAGATGCATAGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000517308.2 ENST00000522390.2 ENST00000524236.2 ENST00000650619.1 ENST00000655458.1 |
||
| CDS GCA 72 bp | TCCGGACATACTCGTCCCATGAAGATAACTGATGACTaGACAACTCTGTTGTTGCAAATGACAGCATCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SGHTRPMKITDD*TTLLLQMTASH Trigger: ATGAGATGCTGTCATTTGCAACAACAGAGTTGTGCAGTCATCAGTTATCTTCATGGGACGAGTATGTCCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS CAA 72 bp | GGCACCCTGATCTCAGACGTCCAGACTCTAGAACTTTaGAGAGTTAGAATTGTGTTTGTCCTGATAATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTLISDVQTLEL*RVRIVFVLIMW Trigger: CCACATTATCAGGACAAACACAATTCTAACTCTCAAAAGTTCTAGAGTCTGGACGTCTGAGATCAGGGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521904.5 |
||
| CDS CAA 72 bp | TGGGTAAACTGCCATCCTCTTTTCTCTCGTGCTTTATaGTTTTCTGTGGGTTCTGCAGAAATAACCACATGC | + |
|
Preference number: 6 (lower is better) Translates to: WVNCHPLFSRAL*FSVGSAEITTC Trigger: GCATGTGGTTATTTCTGCAGAACCCACAGAAAACAATAAAGCACGAGAGAAAAGAGGATGGCAGTTTACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517308.2 ENST00000524236.2 |
||
| CDS CCA 72 bp | AGTATCATTGCAAAGCTTTGCACAACCTATGTTTCCTaGGTAAACTGCCATCCTCTTTTCTCTCGTGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SIIAKLCTTYVS*VNCHPLFSRAL Trigger: TAAAGCACGAGAGAAAAGAGGATGGCAGTTTACCCAGGAAACATAGGTTGTGCAAAGCTTTGCAATGATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000517308.2 ENST00000522390.2 ENST00000524236.2 ENST00000650619.1 ENST00000655458.1 |
||
| CDS TCA 72 bp | CATTATGGGAAGACAGCATTCTGTTCTTCATTGCTCTaGATTGAGAGTATCATTGCAAAGCTTTGCACAACC | + |
|
Preference number: 6 (lower is better) Translates to: HYGKTAFCSSLL*IESIIAKLCTT Trigger: GGTTGTGCAAAGCTTTGCAATGATACTCTCAATTCAGAGCAATGAAGAACAGAATGCTGTCTTCCCATAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000517308.2 ENST00000522390.2 ENST00000524236.2 ENST00000650619.1 ENST00000655458.1 |
||
| CDS GCA 72 bp | GAGTGCCACATGGATCTGTGCATGCAGAAAGATTGTTaGACCGAAGAAGAGGAACTCCAAATTAAAAATTTA | + |
|
Preference number: 6 (lower is better) Translates to: ECHMDLCMQKDC*TEEEELQIKNL Trigger: TAAATTTTTAATTTGGAGTTCCTCTTCTTCGGTGCAACAATCTTTCTGCATGCACAGATCCATGTGGCACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000517308.2 ENST00000522390.2 ENST00000524236.2 ENST00000650619.1 ENST00000655458.1 |
||
| CDS GCA 72 bp | TGTACTCCAATGTGCAAATGTACAACATTTTCCTTGTaGATTCATCTTGATAAAAGGGACCACAGGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CTPMCKCTTFSL*IHLDKRDHRSS Trigger: AGAGCTCCTGTGGTCCCTTTTATCAAGATGAATGCACAAGGAAAATGTTGTACATTTGCACATTGGAGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000521753.5 ENST00000524236.2 |
||
| CDS TCA 72 bp | TTTATGGTTATGGTGCAACTAAGTAGGGACAGATTATaGAGGAATTCCCACCTTATTCTCAGTTTTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FMVMVQLSRDRL*RNSHLILSFVW Trigger: CCAGACAAAACTGAGAATAAGGTGGGAATTCCTTCATAATCTGTCCCTACTTAGTTGCACCATAACCATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522390.2 ENST00000655458.1 |
||
| CDS GCA 72 bp | TTATTGTTTTCTGTGGGTTCTGCAGAAATAACCACATaGAACATTCCCTATGCATCTTTCTTCCCTCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLFSVGSAEITT*NIPYASFFPQN Trigger: ATTCTGAGGGAAGAAAGATGCATAGGGAATGTTGCATGTGGTTATTTCTGCAGAACCCACAGAAAACAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517308.2 ENST00000524236.2 |
||
| CDS CAA 72 bp | CACAGAAAGAAAACTTTGGCTTGTATTATCCGCTGTTaGAATCTCAAAATTCTCACCTTGCTGTGTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: HRKKTLACIIRC*NLKILTLLCPS Trigger: TGATGGACACAGCAAGGTGAGAATTTTGAGATTCAAACAGCGGATAATACAAGCCAAAGTTTTCTTTCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517308.2 ENST00000522390.2 |
||
| CDS CAA 90 bp | ATTTGGAGTCTCAGTCTTTTTATCCCTGAAAGTGCAGAGTTTCTTTaGCAAACTGATGTTCCTCACATCGGTGAAGAATTCTATGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: IWSLSLFIPESAEFL*QTDVPHIGEEFYVT Trigger: TGTTACATAGAATTCTTCACCGATGTGAGGAACATCAGTTTGCAAAAGAAACTCTGCACTTTCAGGGATAAAAAGACTGAGACTCCAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS TCA 72 bp | ACAGAAAGAAAACTTTGGCTTGTATTATCCGCTGTTTaGATCTCAAAATTCTCACCTTGCTGTGTCCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: TERKLWLVLSAV*ISKFSPCCVHQ Trigger: TTGATGGACACAGCAAGGTGAGAATTTTGAGATTCAAACAGCGGATAATACAAGCCAAAGTTTTCTTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517308.2 ENST00000522390.2 |
||
| CDS TCA 72 bp | TGGCTGACCTTAATCTACAGATTGATTGTGATATCTTaGAGATGGCCTTTCGTGACAATTCACACATATATC | + |
|
Preference number: 6 (lower is better) Translates to: WLTLIYRLIVIS*RWPFVTIHTYI Trigger: GATATATGTGTGAATTGTCACGAAAGGCCATCTTCAAGATATCACAATCAATCTGTAGATTAAGGTCAGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522390.2 ENST00000655458.1 |
||
| CDS GCA 72 bp | AAGAAAACATATTGCCATGGTGTAGAAATAACCACATaGAACATTCCCTATGCATCTTTCTTCCCTCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KKTYCHGVEITT*NIPYASFFPQN Trigger: ATTCTGAGGGAAGAAAGATGCATAGGGAATGTTGCATGTGGTTATTTCTACACCATGGCAATATGTTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650619.1 |
||
| CDS CCA 72 bp | ACTGTTGTTGCAAATGACAGCATCTCATTCTTTTTATaGCTGAAGTGTACTCCAATGTGCAAATGTACAACA | + |
|
Preference number: 6 (lower is better) Translates to: TVVANDSISFFL*LKCTPMCKCTT Trigger: TGTTGTACATTTGCACATTGGAGTACACTTCAGCCATAAAAAGAATGAGATGCTGTCATTTGCAACAACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524236.2 |
||
| CDS CCA 72 bp | TCTGTTGTTGCAAATGACAGCATCTCATTCTTTTTATaGCTGAAGTGTACTCCAATGTGCAAATGTACAACA | + |
|
Preference number: 6 (lower is better) Translates to: SVVANDSISFFL*LKCTPMCKCTT Trigger: TGTTGTACATTTGCACATTGGAGTACACTTCAGCCATAAAAAGAATGAGATGCTGTCATTTGCAACAACAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521753.5 |
||
| CDS CAA 90 bp | AATATTATATTGGCTGACCTTAATCTACAGATTGATTGTGATATCTaGAAGATGGCCTTTCGTGACAATTCACACATATATCTCCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: NIILADLNLQIDCDI*KMAFRDNSHIYLPL Trigger: GAGAGGGAGATATATGTGTGAATTGTCACGAAAGGCCATCTTCAAGATATCACAATCAATCTGTAGATTAAGGTCAGCCAATATAATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522390.2 ENST00000655458.1 |
||
| CDS CAA 72 bp | TTGGCTGACCTTAATCTACAGATTGATTGTGATATCTaGAAGATGGCCTTTCGTGACAATTCACACATATAT | + |
|
Preference number: 6 (lower is better) Translates to: LADLNLQIDCDI*KMAFRDNSHIY Trigger: ATATATGTGTGAATTGTCACGAAAGGCCATCTTCAAGATATCACAATCAATCTGTAGATTAAGGTCAGCCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522390.2 ENST00000655458.1 |
||
| CDS TCA 72 bp | TTGTTGCAAATGACAGCATCTCATTCTTTTTATGGCTaGAGTGTACTCCAATGTGCAAATGTACAACATTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLQMTASHSFYG*SVLQCANVQHF Trigger: AAAATGTTGTACATTTGCACATTGGAGTACACTTCAGCCATAAAAAGAATGAGATGCTGTCATTTGCAACAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000521753.5 ENST00000524236.2 |
||