Pregenerated sensors for LINC02236 (Homo sapiens)
Ensembl gene IDs: ENSG00000251365Ensembl transcript IDs: ENST00000506093.1, ENST00000508881.1, ENST00000648399.1, ENST00000649262.1, ENST00000652281.1, ENST00000660855.1
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCCTCACCTTAGGTGGGGCTCCCCTCCCGCATGGAGTGACGTGCTaGCGGCTGCAGCAGGGAGGCTGGCAGGGTGGTTTGACCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: CLTLGGAPLPHGVTC*RLQQGGWQGGLTTE Trigger: CTCTGTGGTCAAACCACCCTGCCAGCCTCCCTGCTGCAGCCGGCAGCACGTCACTCCATGCGGGAGGGGAGCCCCACCTAAGGTGAGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 90 bp | CACTCATGGCAGGAGGCAAAGGGGGAGCAGGTGCCTCACCTTAGGTaGGGCTCCCCTCCCGCATGGAGTGACGTGCTGCCGGCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: HSWQEAKGEQVPHLR*GSPPAWSDVLPAAA Trigger: TGCTGCAGCCGGCAGCACGTCACTCCATGCGGGAGGGGAGCCCCACCTAAGGTGAGGCACCTGCTCCCCCTTTGCCTCCTGCCATGAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS GCA 90 bp | CCAAGAACCTTAGGTGGGGCTCCCCTCCCGCATGGAGTGACGTGCTaGCGGCTGCAGCAGGGAGGCTGGCAGGGTGGTTTGACCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: PRTLGGAPLPHGVTC*RLQQGGWQGGLTTE Trigger: CTCTGTGGTCAAACCACCCTGCCAGCCTCCCTGCTGCAGCCGGCAGCACGTCACTCCATGCGGGAGGGGAGCCCCACCTAAGGTTCTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CCA 90 bp | AGCCCCCACACTGACGCCTCCCTCGTCCGCAGCTTCGCAGAGCCCTaGCGCGGCTTCCCCAGATCGCAGGTCATCAAGTGGTATTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SPHTDASLVRSFAEP*RGFPRSQVIKWYFL Trigger: CAGGAAATACCACTTGATGACCTGCGATCTGGGGAAGCCGCGCCAGGGCTCTGCGAAGCTGCGGACGAGGGAGGCGTCAGTGTGGGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS GCA 90 bp | TTCTCGGAGGTCCCAGGCCCCAAGTATGCAGCATCCTCTCTCAGCTaGCGAGAGGCGCTAAACTCTTGTGCTCATGCTCGCTGGCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: FSEVPGPKYAASSLS*REALNSCAHARWQC Trigger: GCACTGCCAGCGAGCATGAGCACAAGAGTTTAGCGCCTCTCGGCAGCTGAGAGAGGATGCTGCATACTTGGGGCCTGGGACCTCCGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 90 bp | GCACCAACATTTGCATCTGGTGAGGACTTGGGAAGCTTCCACTCATaGCAGGAGGCAAAGGGGGAGCAGGTGCCTCACCTTAGGTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: APTFASGEDLGSFHS*QEAKGEQVPHLRWG Trigger: GCCCCACCTAAGGTGAGGCACCTGCTCCCCCTTTGCCTCCTGCCATGAGTGGAAGCTTCCCAAGTCCTCACCAGATGCAAATGTTGGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS GCA 90 bp | CTTTCGGCTGAAGAAGGTCTTCTCGGAGGTCCCAGGCCCCAAGTATaGAGCATCCTCTCTCAGCTGCCGAGAGGCGCTAAACTCTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LSAEEGLLGGPRPQV*SILSQLPRGAKLLC Trigger: GCACAAGAGTTTAGCGCCTCTCGGCAGCTGAGAGAGGATGCTGCATACTTGGGGCCTGGGACCTCCGAGAAGACCTTCTTCAGCCGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS GCA 90 bp | AGACCCAGAATGAGCCGACTAGCAGGCTTGGAGCTGCAGGTCTTCTaGCTGCCCCATCGATTATGTCCAGGGCCTCCAAAGATGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: RPRMSRLAGLELQVF*LPHRLCPGPPKMDG Trigger: CCCATCCATCTTTGGAGGCCCTGGACATAATCGATGGGGCAGGCAGAAGACCTGCAGCTCCAAGCCTGCTAGTCGGCTCATTCTGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648399.1 |
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| CDS GCA 90 bp | CAGAGAGATGCCTTTCGACTAGCAGGCTTGGAGCTGCAGGTCTTCTaGCTGCCCCATCGATTATGTCCAGGGCCTCCAAAGATGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: QRDAFRLAGLELQVF*LPHRLCPGPPKMDG Trigger: CCCATCCATCTTTGGAGGCCCTGGACATAATCGATGGGGCAGGCAGAAGACCTGCAGCTCCAAGCCTGCTAGTCGAAAGGCATCTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS GCA 90 bp | TCTCCGAACGGATGGTCCTTCCGGGTGATGCTCTGGGGGAGTGGATaGTCTGTGGTGTTGCTGATCCATTTAGGCCAAAGTCTCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SPNGWSFRVMLWGSG*SVVLLIHLGQSLLL Trigger: CAGGAGGAGACTTTGGCCTAAATGGATCAGCAACACCACAGAGCATCCACTCCCCCAGAGCATCACCCGGAAGGACCATCCGTTCGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS CCA 90 bp | GCTGTACAGGAAGCATGGCACCAACATTTGCATCTGGTGAGGACTTaGGAAGCTTCCACTCATGGCAGGAGGCAAAGGGGGAGCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: AVQEAWHQHLHLVRT*EASTHGRRQRGSRC Trigger: GCACCTGCTCCCCCTTTGCCTCCTGCCATGAGTGGAAGCTTCCCAAGTCCTCACCAGATGCAAATGTTGGTGCCATGCTTCCTGTACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 90 bp | TTCGCAGAGCCCTGGCGCGGCTTCCCCAGATCGCAGGTCATCAAGTaGTATTTCCTGTGCAGCTTAGCTACTCAACATTCGCCAGCATCC | + |
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Preference number: 5 (lower is better) Translates to: FAEPWRGFPRSQVIK*YFLCSLATQHSPAS Trigger: GGATGCTGGCGAATGTTGAGTAGCTAAGCTGCACAGGAAATACCACTTGATGACCTGCGATCTGGGGAAGCCGCGCCAGGGCTCTGCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CCA 90 bp | TCTCCCAGGATGTCTCCGAACGGATGGTCCTTCCGGGTGATGCTCTaGGGGAGTGGATGCTCTGTGGTGTTGCTGATCCATTTAGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: SPRMSPNGWSFRVML*GSGCSVVLLIHLGQ Trigger: TTGGCCTAAATGGATCAGCAACACCACAGAGCATCCACTCCCCCAGAGCATCACCCGGAAGGACCATCCGTTCGGAGACATCCTGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS CCA 90 bp | GTCAGACAAGAAACCTCTTGTTCTCCCAGGATGTCTCCGAACGGATaGTCCTTCCGGGTGATGCTCTGGGGGAGTGGATGCTCTGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VRQETSCSPRMSPNG*SFRVMLWGSGCSVV Trigger: CACCACAGAGCATCCACTCCCCCAGAGCATCACCCGGAAGGACCATCCGTTCGGAGACATCCTGGGAGAACAAGAGGTTTCTTGTCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS GCA 90 bp | TTTGCCCTTGGAAGTGAAACCCAAGAGCAACTGGGATTCCCCCGGTaGTCTCCTGGAGCGTCTTGGCCCCATTCTGTTCTCTTCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: FALGSETQEQLGFPR*SPGASWPHSVLFQH Trigger: ATGCTGGAAGAGAACAGAATGGGGCCAAGACGCTCCAGGAGAGCACCGGGGGAATCCCAGTTGCTCTTGGGTTTCACTTCCAAGGGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS CCA 90 bp | ACCCAAGAGCAACTGGGATTCCCCCGGTGCTCTCCTGGAGCGTCTTaGCCCCATTCTGTTCTCTTCCAGCATCTTTCATCTCCCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: TQEQLGFPRCSPGAS*PHSVLFQHLSSPIF Trigger: GAAGATGGGAGATGAAAGATGCTGGAAGAGAACAGAATGGGGCCAAGACGCTCCAGGAGAGCACCGGGGGAATCCCAGTTGCTCTTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS TCA 90 bp | TTCTGCAGGCTGTACAGGAAGCATGGCACCAACATTTGCATCTGGTaGGGACTTGGGAAGCTTCCACTCATGGCAGGAGGCAAAGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: FCRLYRKHGTNICIW*GLGKLPLMAGGKGG Trigger: TCCCCCTTTGCCTCCTGCCATGAGTGGAAGCTTCCCAAGTCCTCACCAGATGCAAATGTTGGTGCCATGCTTCCTGTACAGCCTGCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS GCA 90 bp | CATGAAGACCGTTGGGAAGCCTTCAACTGGGACAAGAATAAGGTGTaGTTTCGGCTGAAGAAGGTCTTCTCGGAGGTCCCAGGCCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: HEDRWEAFNWDKNKV*FRLKKVFSEVPGPK Trigger: CTTGGGGCCTGGGACCTCCGAGAAGACCTTCTTCAGCCGAAAGCACACCTTATTCTTGTCCCAGTTGAAGGCTTCCCAACGGTCTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 90 bp | GGCGACCATCCAGATCCTTCTGAACGGAGCCCTCGCACTGGTTGTTaGTGCTGCCACTCTTTGTCTGGTGCTGTCCCTTTATCAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: GDHPDPSERSPRTGC*CCHSLSGAVPLSTS Trigger: AGAAGTTGATAAAGGGACAGCACCAGACAAAGAGTGGCAGCACCAACAACCAGTGCGAGGGCTCCGTTCAGAAGGATCTGGATGGTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CCA 90 bp | AAGTCTCCTCCTGGGTCTTCTGTCTCCTGTTACCCTCTTGACCAGTaGCATACCCACTCAGTAGCGGCCCTCCTGAGAACTAAGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: KSPPGSSVSCYPLDQ*HTHSVAALLRTKSP Trigger: TGGAGACTTAGTTCTCAGGAGGGCCGCTACTGAGTGGGTATGCCACTGGTCAAGAGGGTAACAGGAGACAGAAGACCCAGGAGGAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS TCA 90 bp | GTTGGGAAGCCTTCAACTGGGACAAGAATAAGGTGTGCTTTCGGCTaGAGAAGGTCTTCTCGGAGGTCCCAGGCCCCAAGTATGCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: VGKPSTGTRIRCAFG*RRSSRRSQAPSMQH Trigger: ATGCTGCATACTTGGGGCCTGGGACCTCCGAGAAGACCTTCTTCAGCCGAAAGCACACCTTATTCTTGTCCCAGTTGAAGGCTTCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 90 bp | TCTCTCAGCTGCCGAGAGGCGCTAAACTCTTGTGCTCATGCTCGCTaGCAGTGCCTCTGTAATCCCCTTAAATCAGTAGCAGTCAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SLSCREALNSCAHAR*QCLCNPLKSVAVKS Trigger: GCTCTTGACTGCTACTGATTTAAGGGGATTACAGAGGCACTGCCAGCGAGCATGAGCACAAGAGTTTAGCGCCTCTCGGCAGCTGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS TCA 90 bp | CCAAACTCAGGGAGCATGGGGGATTTCATTATAGCAGGAAGGACTTaGGTCAGAGGGCAGAGAGATGTGGTCAGAGGTGTCCCCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: PNSGSMGDFIIAGRT*VRGQRDVVRGVPFI Trigger: GATGAAGGGGACACCTCTGACCACATCTCTCTGCCCTCTGACTCAAGTCCTTCCTGCTATAATGAAATCCCCCATGCTCCCTGAGTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS GCA 90 bp | AGCTGCCGAGAGGCGCTAAACTCTTGTGCTCATGCTCGCTGGCAGTaGCTCTGTAATCCCCTTAAATCAGTAGCAGTCAAGAGCCCTAAT | + |
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Preference number: 5 (lower is better) Translates to: SCREALNSCAHARWQ*LCNPLKSVAVKSPN Trigger: ATTAGGGCTCTTGACTGCTACTGATTTAAGGGGATTACAGAGGCACTGCCAGCGAGCATGAGCACAAGAGTTTAGCGCCTCTCGGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 90 bp | GGCACACAGCAAGTGCCACATGAAGACCGTTGGGAAGCCTTCAACTaGGACAAGAATAAGGTGTGCTTTCGGCTGAAGAAGGTCTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: GTQQVPHEDRWEAFN*DKNKVCFRLKKVFS Trigger: CGAGAAGACCTTCTTCAGCCGAAAGCACACCTTATTCTTGTCCCAGTTGAAGGCTTCCCAACGGTCTTCATGTGGCACTTGCTGTGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS TCA 90 bp | GGATTCTCAGAAAGCAATTTGTCATCATCGTTTTGCCCTTGGAAGTaGAACCCAAGAGCAACTGGGATTCCCCCGGTGCTCTCCTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GFSESNLSSSFCPWK*NPRATGIPPVLSWS Trigger: GCTCCAGGAGAGCACCGGGGGAATCCCAGTTGCTCTTGGGTTTCACTTCCAAGGGCAAAACGATGATGACAAATTGCTTTCTGAGAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS CCA 90 bp | AAGCGGTTTCTTTGGCTCACAGTTCTGCAGGCTGTACAGGAAGCATaGCACCAACATTTGCATCTGGTGAGGACTTGGGAAGCTTCCACT | + |
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Preference number: 5 (lower is better) Translates to: KRFLWLTVLQAVQEA*HQHLHLVRTWEAST Trigger: AGTGGAAGCTTCCCAAGTCCTCACCAGATGCAAATGTTGGTGCCATGCTTCCTGTACAGCCTGCAGAACTGTGAGCCAAAGAAACCGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS TCA 90 bp | GTGTCCCTGTCATTTTCCAGGTCAGCTGGGTCTCACTCGGTACCCTaGAACTGGGTAATTTATAAAGAAAAGCGGTTTCTTTGGCTCACA | + |
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Preference number: 5 (lower is better) Translates to: VSLSFSRSAGSHSVP*NWVIYKEKRFLWLT Trigger: TGTGAGCCAAAGAAACCGCTTTTCTTTATAAATTACCCAGTTTCAGGGTACCGAGTGAGACCCAGCTGACCTGGAAAATGACAGGGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS GCA 90 bp | CATGATGCAGAGCCCATTATGGACAAGTCTCTGGCTGAAAGTCCCTaGAAGAGGGATGGATTCTCAGAAAGCAATTTGTCATCATCGTTT | + |
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Preference number: 5 (lower is better) Translates to: HDAEPIMDKSLAESP*KRDGFSESNLSSSF Trigger: AAACGATGATGACAAATTGCTTTCTGAGAATCCATCCCTCTTGCAGGGACTTTCAGCCAGAGACTTGTCCATAATGGGCTCTGCATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS GCA 90 bp | CCAGCTCAACTCAATGTGAATGCAATGATCATGCATTCTTCACACTaGATCAAAAACAAGCAGATGTCTCGTGGATCCATTCCCTGTACA | + |
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Preference number: 5 (lower is better) Translates to: PAQLNVNAMIMHSSH*IKNKQMSRGSIPCT Trigger: TGTACAGGGAATGGATCCACGAGACATCTGCTTGTTTTTGATGCAGTGTGAAGAATGCATGATCATTGCATTCACATTGAGTTGAGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508881.1 |
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| CDS GCA 90 bp | TGGCCAAGCATATCTTTACAACCATCCAGCTCAACTCAATGTGAATaGAATGATCATGCATTCTTCACACTGCATCAAAAACAAGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: WPSISLQPSSSTQCE*NDHAFFTLHQKQAD Trigger: ATCTGCTTGTTTTTGATGCAGTGTGAAGAATGCATGATCATTGCATTCACATTGAGTTGAGCTGGATGGTTGTAAAGATATGCTTGGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508881.1 |
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| CDS CCA 90 bp | GATCATGCATTCTTCACACTGCATCAAAAACAAGCAGATGTCTCGTaGATCCATTCCCTGTACAATATTCCTAAATGTTCAAACCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: DHAFFTLHQKQADVS*IHSLYNIPKCSNLH Trigger: ATGCAGGTTTGAACATTTAGGAATATTGTACAGGGAATGGATCCACGAGACATCTGCTTGTTTTTGATGCAGTGTGAAGAATGCATGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508881.1 |
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| CDS CCA 72 bp | CAGGTGCCTCACCTTAGGTGGGGCTCCCCTCCCGCATaGAGTGACGTGCTGCCGGCTGCAGCAGGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: QVPHLRWGSPPA*SDVLPAAAGRL Trigger: CAGCCTCCCTGCTGCAGCCGGCAGCACGTCACTCCATGCGGGAGGGGAGCCCCACCTAAGGTGAGGCACCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 72 bp | CAGGAGGCAAAGGGGGAGCAGGTGCCTCACCTTAGGTaGGGCTCCCCTCCCGCATGGAGTGACGTGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: QEAKGEQVPHLR*GSPPAWSDVLP Trigger: CGGCAGCACGTCACTCCATGCGGGAGGGGAGCCCCACCTAAGGTGAGGCACCTGCTCCCCCTTTGCCTCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 72 bp | ATGGCCAAGAACCTTAGGTGGGGCTCCCCTCCCGCATaGAGTGACGTGCTGCCGGCTGCAGCAGGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: MAKNLRWGSPPA*SDVLPAAAGRL Trigger: CAGCCTCCCTGCTGCAGCCGGCAGCACGTCACTCCATGCGGGAGGGGAGCCCCACCTAAGGTTCTTGGCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CCA 72 bp | ACTGACGCCTCCCTCGTCCGCAGCTTCGCAGAGCCCTaGCGCGGCTTCCCCAGATCGCAGGTCATCAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: TDASLVRSFAEP*RGFPRSQVIKW Trigger: CCACTTGATGACCTGCGATCTGGGGAAGCCGCGCCAGGGCTCTGCGAAGCTGCGGACGAGGGAGGCGTCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS TCA 72 bp | CACGGCAGCACGTCCAGGCGACCATCCAGATCCTTCTaGACGGAGCCCTCGCACTGGTTGTTGGTGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: HGSTSRRPSRSF*TEPSHWLLVLP Trigger: TGGCAGCACCAACAACCAGTGCGAGGGCTCCGTTCAGAAGGATCTGGATGGTCGCCTGGACGTGCTGCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS GCA 72 bp | GTCCCAGGCCCCAAGTATGCAGCATCCTCTCTCAGCTaGCGAGAGGCGCTAAACTCTTGTGCTCATGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: VPGPKYAASSLS*REALNSCAHAR Trigger: GCGAGCATGAGCACAAGAGTTTAGCGCCTCTCGGCAGCTGAGAGAGGATGCTGCATACTTGGGGCCTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS TCA 72 bp | GTCTCCTCCTGGGTCTTCTGTCTCCTGTTACCCTCTTaGCCAGTGGCATACCCACTCAGTAGCGGCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSSWVFCLLLPS*PVAYPLSSGPP Trigger: AGGAGGGCCGCTACTGAGTGGGTATGCCACTGGTCAAGAGGGTAACAGGAGACAGAAGACCCAGGAGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS GCA 72 bp | GAAGAAGGTCTTCTCGGAGGTCCCAGGCCCCAAGTATaGAGCATCCTCTCTCAGCTGCCGAGAGGCGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: EEGLLGGPRPQV*SILSQLPRGAK Trigger: TTTAGCGCCTCTCGGCAGCTGAGAGAGGATGCTGCATACTTGGGGCCTGGGACCTCCGAGAAGACCTTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS GCA 72 bp | TCGATTATGTCCAGGGCCTCCAAAGATGGATGGGGGTaGCAGCAGCCCCGAGTTCCATTCTGGGCATCACAC | + |
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Preference number: 6 (lower is better) Translates to: SIMSRASKDGWG*QQPRVPFWASH Trigger: GTGTGATGCCCAGAATGGAACTCGGGGCTGCTGGCACCCCCATCCATCTTTGGAGGCCCTGGACATAATCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000648399.1 ENST00000652281.1 |
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| CDS GCA 72 bp | ATGAGCCGACTAGCAGGCTTGGAGCTGCAGGTCTTCTaGCTGCCCCATCGATTATGTCCAGGGCCTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: MSRLAGLELQVF*LPHRLCPGPPK Trigger: CTTTGGAGGCCCTGGACATAATCGATGGGGCAGGCAGAAGACCTGCAGCTCCAAGCCTGCTAGTCGGCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648399.1 |
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| CDS GCA 72 bp | GCCTTTCGACTAGCAGGCTTGGAGCTGCAGGTCTTCTaGCTGCCCCATCGATTATGTCCAGGGCCTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AFRLAGLELQVF*LPHRLCPGPPK Trigger: CTTTGGAGGCCCTGGACATAATCGATGGGGCAGGCAGAAGACCTGCAGCTCCAAGCCTGCTAGTCGAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS GCA 72 bp | GGAAGTGAAACCCAAGAGCAACTGGGATTCCCCCGGTaGTCTCCTGGAGCGTCTTGGCCCCATTCTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GSETQEQLGFPR*SPGASWPHSVL Trigger: GAGAACAGAATGGGGCCAAGACGCTCCAGGAGAGCACCGGGGGAATCCCAGTTGCTCTTGGGTTTCACTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS CCA 72 bp | AACCCAAGAGCAACTGGGATTCCCCCGGTGCTCTCCTaGAGCGTCTTGGCCCCATTCTGTTCTCTTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: NPRATGIPPVLS*SVLAPFCSLPA Trigger: TGCTGGAAGAGAACAGAATGGGGCCAAGACGCTCCAGGAGAGCACCGGGGGAATCCCAGTTGCTCTTGGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS CCA 72 bp | GAAACCTCTTGTTCTCCCAGGATGTCTCCGAACGGATaGTCCTTCCGGGTGATGCTCTGGGGGAGTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: ETSCSPRMSPNG*SFRVMLWGSGC Trigger: GCATCCACTCCCCCAGAGCATCACCCGGAAGGACCATCCGTTCGGAGACATCCTGGGAGAACAAGAGGTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS CCA 72 bp | TTTGCATCTGGTGAGGACTTGGGAAGCTTCCACTCATaGCAGGAGGCAAAGGGGGAGCAGGTGCCTCACCTT | + |
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Preference number: 6 (lower is better) Translates to: FASGEDLGSFHS*QEAKGEQVPHL Trigger: AAGGTGAGGCACCTGCTCCCCCTTTGCCTCCTGCCATGAGTGGAAGCTTCCCAAGTCCTCACCAGATGCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 72 bp | ATCGTTTTGCCCTTGGAAGTGAAACCCAAGAGCAACTaGGATTCCCCCGGTGCTCTCCTGGAGCGTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: IVLPLEVKPKSN*DSPGALLERLG Trigger: GCCAAGACGCTCCAGGAGAGCACCGGGGGAATCCCAGTTGCTCTTGGGTTTCACTTCCAAGGGCAAAACGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS CCA 72 bp | CCTGGGTCTTCTGTCTCCTGTTACCCTCTTGACCAGTaGCATACCCACTCAGTAGCGGCCCTCCTGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: PGSSVSCYPLDQ*HTHSVAALLRT Trigger: AGTTCTCAGGAGGGCCGCTACTGAGTGGGTATGCCACTGGTCAAGAGGGTAACAGGAGACAGAAGACCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS CCA 72 bp | ATGTCTCCGAACGGATGGTCCTTCCGGGTGATGCTCTaGGGGAGTGGATGCTCTGTGGTGTTGCTGATCCAT | + |
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Preference number: 6 (lower is better) Translates to: MSPNGWSFRVML*GSGCSVVLLIH Trigger: ATGGATCAGCAACACCACAGAGCATCCACTCCCCCAGAGCATCACCCGGAAGGACCATCCGTTCGGAGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS CAA 72 bp | GCAACTGGGATTCCCCCGGTGCTCTCCTGGAGCGTCTaGGCCCCATTCTGTTCTCTTCCAGCATCTTTCATC | + |
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Preference number: 6 (lower is better) Translates to: ATGIPPVLSWSV*APFCSLPASFI Trigger: GATGAAAGATGCTGGAAGAGAACAGAATGGGGCCAAGACGCTCCAGGAGAGCACCGGGGGAATCCCAGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS CAA 72 bp | CGGGTGATGCTCTGGGGGAGTGGATGCTCTGTGGTGTaGCTGATCCATTTAGGCCAAAGTCTCCTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RVMLWGSGCSVV*LIHLGQSLLLG Trigger: ACCCAGGAGGAGACTTTGGCCTAAATGGATCAGCAACACCACAGAGCATCCACTCCCCCAGAGCATCACCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS CAA 90 bp | TGGTCCTTCCGGGTGATGCTCTGGGGGAGTGGATGCTCTGTGGTGTaGCTGATCCATTTAGGCCAAAGTCTCCTCCTGGGTCTTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WSFRVMLWGSGCSVV*LIHLGQSLLLGLLS Trigger: AGACAGAAGACCCAGGAGGAGACTTTGGCCTAAATGGATCAGCAACACCACAGAGCATCCACTCCCCCAGAGCATCACCCGGAAGGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS GCA 72 bp | GAACAGAGGGACTGCACAGGTGCTCCCGCCTACACCTaGTTTTGGAAGGAAAGGTCTTCCAGCCCCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: EQRDCTGAPAYT*FWKERSSSPTK Trigger: TTTTGTGGGGCTGGAAGACCTTTCCTTCCAAAAGCAGGTGTAGGCGGGAGCACCTGTGCAGTCCCTCTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000648399.1 ENST00000649262.1 |
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| CDS GCA 72 bp | GGATGGTCCTTCCGGGTGATGCTCTGGGGGAGTGGATaGTCTGTGGTGTTGCTGATCCATTTAGGCCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GWSFRVMLWGSG*SVVLLIHLGQS Trigger: ACTTTGGCCTAAATGGATCAGCAACACCACAGAGCATCCACTCCCCCAGAGCATCACCCGGAAGGACCATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS CCA 72 bp | GAAGCATGGCACCAACATTTGCATCTGGTGAGGACTTaGGAAGCTTCCACTCATGGCAGGAGGCAAAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: EAWHQHLHLVRT*EASTHGRRQRG Trigger: CCCCCTTTGCCTCCTGCCATGAGTGGAAGCTTCCCAAGTCCTCACCAGATGCAAATGTTGGTGCCATGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 72 bp | CCCTGGCGCGGCTTCCCCAGATCGCAGGTCATCAAGTaGTATTTCCTGTGCAGCTTAGCTACTCAACATTCG | + |
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Preference number: 6 (lower is better) Translates to: PWRGFPRSQVIK*YFLCSLATQHS Trigger: CGAATGTTGAGTAGCTAAGCTGCACAGGAAATACCACTTGATGACCTGCGATCTGGGGAAGCCGCGCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CCA 72 bp | CCAGATCCTTCTGAACGGAGCCCTCGCACTGGTTGTTaGTGCTGCCACTCTTTGTCTGGTGCTGTCCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: PDPSERSPRTGC*CCHSLSGAVPL Trigger: TAAAGGGACAGCACCAGACAAAGAGTGGCAGCACCAACAACCAGTGCGAGGGCTCCGTTCAGAAGGATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CCA 72 bp | CAACTGGGATTCCCCCGGTGCTCTCCTGGAGCGTCTTaGCCCCATTCTGTTCTCTTCCAGCATCTTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: QLGFPRCSPGAS*PHSVLFQHLSS Trigger: AGATGAAAGATGCTGGAAGAGAACAGAATGGGGCCAAGACGCTCCAGGAGAGCACCGGGGGAATCCCAGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS CAA 90 bp | TGGCTCACAGTTCTGCAGGCTGTACAGGAAGCATGGCACCAACATTaGCATCTGGTGAGGACTTGGGAAGCTTCCACTCATGGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: WLTVLQAVQEAWHQH*HLVRTWEASTHGRR Trigger: CCTCCTGCCATGAGTGGAAGCTTCCCAAGTCCTCACCAGATGCAAATGTTGGTGCCATGCTTCCTGTACAGCCTGCAGAACTGTGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CAA 90 bp | AACCCAAGAGCAACTGGGATTCCCCCGGTGCTCTCCTGGAGCGTCTaGGCCCCATTCTGTTCTCTTCCAGCATCTTTCATCTCCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: NPRATGIPPVLSWSV*APFCSLPASFISHL Trigger: AAGATGGGAGATGAAAGATGCTGGAAGAGAACAGAATGGGGCCAAGACGCTCCAGGAGAGCACCGGGGGAATCCCAGTTGCTCTTGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS GCA 72 bp | GATCCTTCTGAACGGAGCCCTCGCACTGGTTGTTGGTaGTGCCACTCTTTGTCTGGTGCTGTCCCTTTATCA | + |
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Preference number: 6 (lower is better) Translates to: DPSERSPRTGCW*CHSLSGAVPLS Trigger: TGATAAAGGGACAGCACCAGACAAAGAGTGGCAGCACCAACAACCAGTGCGAGGGCTCCGTTCAGAAGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CCA 72 bp | AGAAGGCAGTTCCAAACTTCTGCTTCTGTTCACAGATaGGGGAGCCCCCACCGTGAACTCCAAGTCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RRQFQTSASVHR*GSPHRELQVSA Trigger: AGCTGAGACTTGGAGTTCACGGTGGGGGCTCCCCCATCTGTGAACAGAAGCAGAAGTTTGGAACTGCCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CCA 72 bp | AGACACAGTTCTGACAACTCCCAGTGGAAAGAGTCCTaGATCGGGTTTCTTGGATTGCCGTGGGGGATAGGG | + |
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Preference number: 6 (lower is better) Translates to: RHSSDNSQWKES*IGFLGLPWGIG Trigger: CCCTATCCCCCACGGCAATCCAAGAAACCCGATCCAGGACTCTTTCCACTGGGAGTTGTCAGAACTGTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CCA 72 bp | TCCAGCCTCCCTGGTTTGTTTTCACATACAAGAAGCTaGGACAGAGGGAGAAGGATGGAGCCGCATCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SSLPGLFSHTRS*DRGRRMEPHPL Trigger: CAGAGGATGCGGCTCCATCCTTCTCCCTCTGTCCCAGCTTCTTGTATGTGAAAACAAACCAGGGAGGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS GCA 72 bp | CGTTGGGAAGCCTTCAACTGGGACAAGAATAAGGTGTaGTTTCGGCTGAAGAAGGTCTTCTCGGAGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: RWEAFNWDKNKV*FRLKKVFSEVP Trigger: TGGGACCTCCGAGAAGACCTTCTTCAGCCGAAAGCACACCTTATTCTTGTCCCAGTTGAAGGCTTCCCAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CCA 72 bp | TGCCGAGAGGCGCTAAACTCTTGTGCTCATGCTCGCTaGCAGTGCCTCTGTAATCCCCTTAAATCAGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: CREALNSCAHAR*QCLCNPLKSVA Trigger: TGCTACTGATTTAAGGGGATTACAGAGGCACTGCCAGCGAGCATGAGCACAAGAGTTTAGCGCCTCTCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CAA 90 bp | GCCAAACTCAGGGAGCATGGGGGATTTCATTATAGCAGGAAGGACTaGAGTCAGAGGGCAGAGAGATGTGGTCAGAGGTGTCCCCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: AKLREHGGFHYSRKD*SQRAERCGQRCPLH Trigger: ATGAAGGGGACACCTCTGACCACATCTCTCTGCCCTCTGACTCAAGTCCTTCCTGCTATAATGAAATCCCCCATGCTCCCTGAGTTTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660855.1 |
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| CDS GCA 72 bp | GAGGCGCTAAACTCTTGTGCTCATGCTCGCTGGCAGTaGCTCTGTAATCCCCTTAAATCAGTAGCAGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: EALNSCAHARWQ*LCNPLKSVAVK Trigger: CTTGACTGCTACTGATTTAAGGGGATTACAGAGGCACTGCCAGCGAGCATGAGCACAAGAGTTTAGCGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS GCA 72 bp | TTCCCCAGATCGCAGGTCATCAAGTGGTATTTCCTGTaGAGCTTAGCTACTCAACATTCGCCAGCATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FPRSQVIKWYFL*SLATQHSPASW Trigger: CCAGGATGCTGGCGAATGTTGAGTAGCTAAGCTGCACAGGAAATACCACTTGATGACCTGCGATCTGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CCA 72 bp | CTTTGGCTCACAGTTCTGCAGGCTGTACAGGAAGCATaGCACCAACATTTGCATCTGGTGAGGACTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LWLTVLQAVQEA*HQHLHLVRTWE Trigger: TTCCCAAGTCCTCACCAGATGCAAATGTTGGTGCCATGCTTCCTGTACAGCCTGCAGAACTGTGAGCCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CAA 90 bp | GGTTGGTCCCAAAGCTGGGAATTTGACTTAAAACCATCATGTGGATaGACTAACCACCTAAGACATGACACGGCAGCACGTCCAGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: GWSQSWEFDLKPSCG*TNHLRHDTAARPGD Trigger: GTCGCCTGGACGTGCTGCCGTGTCATGTCTTAGGTGGTTAGTCAATCCACATGATGGTTTTAAGTCAAATTCCCAGCTTTGGGACCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CAA 90 bp | GAGGGATGGATTCTCAGAAAGCAATTTGTCATCATCGTTTTGCCCTaGGAAGTGAAACCCAAGAGCAACTGGGATTCCCCCGGTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: EGWILRKQFVIIVLP*EVKPKSNWDSPGAL Trigger: GAGAGCACCGGGGGAATCCCAGTTGCTCTTGGGTTTCACTTCCAAGGGCAAAACGATGATGACAAATTGCTTTCTGAGAATCCATCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS TCA 72 bp | TCACTTCTGGCTCCATCCCATTCATCTTCTAGGACATaGGGGCTGGGAATGAGACTTGGCAATGCCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: SLLAPSHSSSRT*GLGMRLGNATV Trigger: AACTGTGGCATTGCCAAGTCTCATTCCCAGCCCTCATGTCCTAGAAGATGAATGGGATGGAGCCAGAAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508881.1 |
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| CDS CCA 72 bp | TCTGACATGATGCAGAGCCCATTATGGACAAGTCTCTaGCTGAAAGTCCCTGCAAGAGGGATGGATTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SDMMQSPLWTSL*LKVPARGMDSQ Trigger: CTGAGAATCCATCCCTCTTGCAGGGACTTTCAGCCAGAGACTTGTCCATAATGGGCTCTGCATCATGTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS CAA 90 bp | GGGGCCAGGGTTCCCTCTAAGTATGAGTATGGGAAACCAATTGTCTaGGATGAAGACACAGTTCTGACAACTCCCAGTGGAAAGAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GARVPSKYEYGKPIV*DEDTVLTTPSGKSP Trigger: AGGACTCTTTCCACTGGGAGTTGTCAGAACTGTGTCTTCATCCAAGACAATTGGTTTCCCATACTCATACTTAGAGGGAACCCTGGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CAA 90 bp | CTGCAAGAGGGATGGATTCTCAGAAAGCAATTTGTCATCATCGTTTaGCCCTTGGAAGTGAAACCCAAGAGCAACTGGGATTCCCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: LQEGWILRKQFVIIV*PLEVKPKSNWDSPG Trigger: ACCGGGGGAATCCCAGTTGCTCTTGGGTTTCACTTCCAAGGGCAAAACGATGATGACAAATTGCTTTCTGAGAATCCATCCCTCTTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS CCA 72 bp | TATCTTCTGCTTCCATCCCATGTTACACATCACTTCTaGCTCCATCCCATTCATCTTCTAGGACATGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: YLLLPSHVTHHF*LHPIHLLGHEG Trigger: GCCCTCATGTCCTAGAAGATGAATGGGATGGAGCCAGAAGTGATGTGTAACATGGGATGGAAGCAGAAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508881.1 |
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| CDS GCA 72 bp | TCGCACTGGTTGTTGGTGCTGCCACTCTTTGTCTGGTaGTGTCCCTTTATCAACTTCTTTCTTAAACCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SHWLLVLPLFVW*CPFINFFLKPV Trigger: TACTGGTTTAAGAAAGAAGTTGATAAAGGGACAGCACCAGACAAAGAGTGGCAGCACCAACAACCAGTGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CAA 72 bp | ATTCTCAGAAAGCAATTTGTCATCATCGTTTTGCCCTaGGAAGTGAAACCCAAGAGCAACTGGGATTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: ILRKQFVIIVLP*EVKPKSNWDSP Trigger: GGGGGAATCCCAGTTGCTCTTGGGTTTCACTTCCAAGGGCAAAACGATGATGACAAATTGCTTTCTGAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS GCA 72 bp | TTTATAAAGAAAAGCGGTTTCTTTGGCTCACAGTTCTaGAGGCTGTACAGGAAGCATGGCACCAACATTTGC | + |
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Preference number: 6 (lower is better) Translates to: FIKKSGFFGSQF*RLYRKHGTNIC Trigger: GCAAATGTTGGTGCCATGCTTCCTGTACAGCCTGCAGAACTGTGAGCCAAAGAAACCGCTTTTCTTTATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS CAA 72 bp | CAAAGCTGGGAATTTGACTTAAAACCATCATGTGGATaGACTAACCACCTAAGACATGACACGGCAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: QSWEFDLKPSCG*TNHLRHDTAAR Trigger: ACGTGCTGCCGTGTCATGTCTTAGGTGGTTAGTCAATCCACATGATGGTTTTAAGTCAAATTCCCAGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CAA 72 bp | GTTCCCTCTAAGTATGAGTATGGGAAACCAATTGTCTaGGATGAAGACACAGTTCTGACAACTCCCAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VPSKYEYGKPIV*DEDTVLTTPSG Trigger: TCCACTGGGAGTTGTCAGAACTGTGTCTTCATCCAAGACAATTGGTTTCCCATACTCATACTTAGAGGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649262.1 |
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| CDS CAA 72 bp | GGATGGATTCTCAGAAAGCAATTTGTCATCATCGTTTaGCCCTTGGAAGTGAAACCCAAGAGCAACTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: GWILRKQFVIIV*PLEVKPKSNWD Trigger: ATCCCAGTTGCTCTTGGGTTTCACTTCCAAGGGCAAAACGATGATGACAAATTGCTTTCTGAGAATCCATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS TCA 72 bp | TCATTTTCCAGGTCAGCTGGGTCTCACTCGGTACCCTaGAACTGGGTAATTTATAAAGAAAAGCGGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SFSRSAGSHSVP*NWVIYKEKRFL Trigger: AAGAAACCGCTTTTCTTTATAAATTACCCAGTTTCAGGGTACCGAGTGAGACCCAGCTGACCTGGAAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506093.1 |
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| CDS GCA 72 bp | AGTAAACACTCATTGCATAAAAGAGGCTTTACTGTGTaGACAGATTTGATTAGGAGCAATTACGACTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SKHSLHKRGFTV*TDLIRSNYDFV Trigger: CACAAAGTCGTAATTGCTCCTAATCAAATCTGTGCACACAGTAAAGCCTCTTTTATGCAATGAGTGTTTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS TCA 72 bp | CATTGCATAAAAGAGGCTTTACTGTGTGCACAGATTTaGTTAGGAGCAATTACGACTTTGTGTCATTCATAT | + |
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Preference number: 6 (lower is better) Translates to: HCIKEALLCAQI*LGAITTLCHSY Trigger: ATATGAATGACACAAAGTCGTAATTGCTCCTAATCAAATCTGTGCACACAGTAAAGCCTCTTTTATGCAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652281.1 |
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| CDS GCA 72 bp | ATATCTTTACAACCATCCAGCTCAACTCAATGTGAATaGAATGATCATGCATTCTTCACACTGCATCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: ISLQPSSSTQCE*NDHAFFTLHQK Trigger: TTTTTGATGCAGTGTGAAGAATGCATGATCATTGCATTCACATTGAGTTGAGCTGGATGGTTGTAAAGATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508881.1 |
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