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Pregenerated sensors for LINC02233 (Homo sapiens)

Ensembl gene IDs: ENSG00000250488

Ensembl transcript IDs: ENST00000513718.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TCTTCACCTTCAAACCCTGGTGTTAATGGCTGGTGGAGAACTGTTTaGTTCTCTTATTGCCCAACCTGTGTGCACACCTTTTCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: SSPSNPGVNGWWRTV*FSYCPTCVHTFSLN
Trigger: ATTGAGAGAAAAGGTGTGCACACAGGTTGGGCAATAAGAGAATCAAACAGTTCTCCACCAGCCATTAACACCAGGGTTTGAAGGTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS TCA 90 bp ATGAGACTCTGTGTGTTCTTTAAACCTGTTTTAGCTGGATTTATGTaGCAACACCTCAGCAGGGAAAGATCTCCCTTGTTACCGCTGGAT +
Preference number: 5 (lower is better)
Translates to: MRLCVFFKPVLAGFM*QHLSRERSPLLPLD
Trigger: ATCCAGCGGTAACAAGGGAGATCTTTCCCTGCTGAGGTGTTGTCACATAAATCCAGCTAAAACAGGTTTAAAGAACACACAGAGTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS GCA 72 bp GGGGTCCTCACAACAGTGTGCTCTGTTGACATATGGTaGGGGAAAGCTCTTCATTACTGCTTGGTGGGATTG +
Preference number: 6 (lower is better)
Translates to: GVLTTVCSVDIW*GKALHYCLVGL
Trigger: CAATCCCACCAAGCAGTAATGAAGAGCTTTCCCGCACCATATGTCAACAGAGCACACTGTTGTGAGGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS CCA 72 bp GGTGCGGGAAAGCTCTTCATTACTGCTTGGTGGGATTaGGAGCTTAAGAGTTCCAGTTCCCCATGTGTCTCT +
Preference number: 6 (lower is better)
Translates to: GAGKLFITAWWD*ELKSSSSPCVS
Trigger: AGAGACACATGGGGAACTGGAACTCTTAAGCTCCCAATCCCACCAAGCAGTAATGAAGAGCTTTCCCGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS CCA 72 bp TACGGGGTCCTCACAACAGTGTGCTCTGTTGACATATaGTGCGGGAAAGCTCTTCATTACTGCTTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: YGVLTTVCSVDI*CGKALHYCLVG
Trigger: TCCCACCAAGCAGTAATGAAGAGCTTTCCCGCACCATATGTCAACAGAGCACACTGTTGTGAGGACCCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS GCA 72 bp GGAGAACTGTTTGATTCTCTTATTGCCCAACCTGTGTaGACACCTTTTCTCTCAATGACCAGCAGGACCTCT +
Preference number: 6 (lower is better)
Translates to: GELFDSLIAQPV*TPFLSMTSRTS
Trigger: AGAGGTCCTGCTGGTCATTGAGAGAAAAGGTGTGCACACAGGTTGGGCAATAAGAGAATCAAACAGTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS TCA 72 bp TCAAACCCTGGTGTTAATGGCTGGTGGAGAACTGTTTaGTTCTCTTATTGCCCAACCTGTGTGCACACCTTT +
Preference number: 6 (lower is better)
Translates to: SNPGVNGWWRTV*FSYCPTCVHTF
Trigger: AAAGGTGTGCACACAGGTTGGGCAATAAGAGAATCAAACAGTTCTCCACCAGCCATTAACACCAGGGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS CAA 72 bp TATTGGATGGTAGAGATGAAAGACATGGTTTTCTACTaGGCCTCCTCTGAAATAATTCTGGTAGGTAGGAGC +
Preference number: 6 (lower is better)
Translates to: YWMVEMKDMVFY*ASSEIILVGRS
Trigger: GCTCCTACCTACCAGAATTATTTCAGAGGAGGCCAAGTAGAAAACCATGTCTTTCATCTCTACCATCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS CAA 72 bp GTGTCTCTACTGACACTGCAAGGTGTAGGCTTGTTATaGGATGGTAGAGATGAAAGACATGGTTTTCTACTT +
Preference number: 6 (lower is better)
Translates to: VSLLTLQGVGLL*DGRDERHGFLL
Trigger: AAGTAGAAAACCATGTCTTTCATCTCTACCATCCAATAACAAGCCTACACCTTGCAGTGTCAGTAGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS CAA 90 bp TTCTATTGGCTACAGAGGCTTTTGTTAGGGTTTTATATGCGTCTGTaGACATTTCAATTTGCCAGCTTCTTCACCTTCAAACCCTGGTGT +
Preference number: 6 (lower is better)
Translates to: FYWLQRLLLGFYMRL*TFQFASFFTFKPWC
Trigger: ACACCAGGGTTTGAAGGTGAAGAAGCTGGCAAATTGAAATGTCAACAGACGCATATAAAACCCTAACAAAAGCCTCTGTAGCCAATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS TCA 72 bp TGTGTGTTCTTTAAACCTGTTTTAGCTGGATTTATGTaGCAACACCTCAGCAGGGAAAGATCTCCCTTGTTA +
Preference number: 6 (lower is better)
Translates to: CVFFKPVLAGFM*QHLSRERSPLL
Trigger: TAACAAGGGAGATCTTTCCCTGCTGAGGTGTTGTCACATAAATCCAGCTAAAACAGGTTTAAAGAACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS GCA 72 bp GTTAGGGTTTTATATGCGTCTGTTGACATTTCAATTTaGCAGCTTCTTCACCTTCAAACCCTGGTGTTAATG +
Preference number: 6 (lower is better)
Translates to: VRVLYASVDISI*QLLHLQTLVLM
Trigger: CATTAACACCAGGGTTTGAAGGTGAAGAAGCTGGCAAATTGAAATGTCAACAGACGCATATAAAACCCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513718.2
CDS CAA 72 bp CTACAGAGGCTTTTGTTAGGGTTTTATATGCGTCTGTaGACATTTCAATTTGCCAGCTTCTTCACCTTCAAA +
Preference number: 6 (lower is better)
Translates to: LQRLLLGFYMRL*TFQFASFFTFK
Trigger: TTTGAAGGTGAAGAAGCTGGCAAATTGAAATGTCAACAGACGCATATAAAACCCTAACAAAAGCCTCTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513718.2