Pregenerated sensors for LINC02232 (Homo sapiens)
Ensembl gene IDs: ENSG00000250125Ensembl transcript IDs: ENST00000509932.2, ENST00000652257.1, ENST00000657399.1, ENST00000659694.1, ENST00000665259.1, ENST00000665528.1, ENST00000667167.1, ENST00000670052.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTTTCCCAGGATGCTTCCCTTAGGATGGGCTGCCTGCATGTGCAGTaGCCTCCTTACCCTTGGGAGGAGAGTGTGAGCAGTGTGTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: LSQDASLRMGCLHVQ*PPYPWEESVSSVFR Trigger: CCTAAACACACTGCTCACACTCTCCTCCCAAGGGTAAGGAGGGCACTGCACATGCAGGCAGCCCATCCTAAGGGAAGCATCCTGGGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000652257.1 ENST00000657399.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS GCA 90 bp | GAACCATCATCTGATATTCCTTGTGGGTGGGGGACAGCCGTCTCCTaGTCCACTCATGCTCGTCTCACTACGGAATTGGATGCCAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: EPSSDIPCGWGTAVS*STHARLTTELDARG Trigger: TCCCCTGGCATCCAATTCCGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGCTGTCCCCCACCCACAAGGAATATCAGATGATGGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665259.1 |
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| CDS GCA 90 bp | CGTCTCCTGCTCCACTCATGCTCGTCTCACTACGGTTCTGCAGGCTaGATAACAAACATGGTGCCAGCCTCTGCTTCTGGTGAGGAACTT | + |
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Preference number: 5 (lower is better) Translates to: RLLLHSCSSHYGSAG*ITNMVPASASGEEL Trigger: AAGTTCCTCACCAGAAGCAGAGGCTGGCACCATGTTTGTTATGCAGCCTGCAGAACCGTAGTGAGACGAGCATGAGTGGAGCAGGAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659694.1 |
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| CDS TCA 90 bp | GCACTCTTCTCAGGCAGAATATTCCAGAGCCTCGGAGCTCATTTTTaGGGAGCCAGCCAAGGGCCCACCCTGAAGAAAGATGCTTATGGG | + |
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Preference number: 5 (lower is better) Translates to: ALFSGRIFQSLGAHF*GASQGPTLKKDAYG Trigger: CCCATAAGCATCTTTCTTCAGGGTGGGCCCTTGGCTGGCTCCTCAAAAATGAGCTCCGAGGCTCTGGAATATTCTGCCTGAGAAGAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS CCA 90 bp | GGACAGCCGTCTCCTGCTCCACTCATGCTCGTCTCACTACGGAATTaGATGCCAGGGGATGTGGTGATAATGACTATAGCTCTCACTTCC | + |
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Preference number: 5 (lower is better) Translates to: GQPSPAPLMLVSLRN*MPGDVVIMTIALTS Trigger: GGAAGTGAGAGCTATAGTCATTATCACCACATCCCCTGGCATCCAATTCCGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665259.1 |
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| CDS TCA 90 bp | GCTGCCTGCATGTGCAGTGCCCTCCTTACCCTTGGGAGGAGAGTGTaGGCAGTGTGTTTAGGAAGTTATATGCATGCCCATCTGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: AACMCSALLTLGRRV*AVCLGSYMHAHLRF Trigger: AAACCTCAGATGGGCATGCATATAACTTCCTAAACACACTGCTCACACTCTCCTCCCAAGGGTAAGGAGGGCACTGCACATGCAGGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000652257.1 ENST00000657399.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS TCA 90 bp | AGAGCCTCGGAGCTCATTTTTGAGGAGCCAGCCAAGGGCCCACCCTaGAGAAAGATGCTTATGGGAAATATACAGGGTTTGAGCAACCCA | + |
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Preference number: 5 (lower is better) Translates to: RASELIFEEPAKGPP*RKMLMGNIQGLSNP Trigger: TGGGTTGCTCAAACCCTGTATATTTCCCATAAGCATCTTTCTTCAGGGTGGGCCCTTGGCTGGCTCCTCAAAAATGAGCTCCGAGGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS TCA 90 bp | TGGGGGACAGCCGTCTCCTGCTCCACTCATGCTCGTCTCACTACCTaGACTCCTATTTCTCAATATCTGCTGCAGAGCAGTTTCATAGGT | + |
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Preference number: 5 (lower is better) Translates to: WGTAVSCSTHARLTT*TPISQYLLQSSFIG Trigger: ACCTATGAAACTGCTCTGCAGCAGATATTGAGAAATAGGAGTTCAGGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGCTGTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670052.1 |
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| CDS TCA 90 bp | GTCATACATAGGCAGCAGGTATACACAGAAGCCTTGGGTCTACAGTaGGTTAGTTCTCCAAGGTTCAGTACAACTGCCCAGGGCAGATGG | + |
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Preference number: 5 (lower is better) Translates to: VIHRQQVYTEALGLQ*VSSPRFSTTAQGRW Trigger: CCATCTGCCCTGGGCAGTTGTACTGAACCTTGGAGAACTAACTCACTGTAGACCCAAGGCTTCTGTGTATACCTGCTGCCTATGTATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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| CDS TCA 90 bp | AGGAAGCAGGCATATTTTACAGGGTGGCAGGGAAGAGAGAGTGCATaGGTGCAAGAGAGGGCAGGAAAAACTGGCTTAAACCACCTGATC | + |
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Preference number: 5 (lower is better) Translates to: RKQAYFTGWQGRESA*VQERAGKTGLNHLI Trigger: GATCAGGTGGTTTAAGCCAGTTTTTCCTGCCCTCTCTTGCACTCATGCACTCTCTCTTCCCTGCCACCCTGTAAAATATGCCTGCTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667167.1 |
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| CDS CCA 90 bp | CATCTTAGTGCAACAGGTGTGGGCCATCAGGAAATAGCCTCTCCCTaGTGCCAGCTGCCAATTTATCACTTTCAGAGAGGCAATGTGATG | + |
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Preference number: 5 (lower is better) Translates to: HLSATGVGHQEIASP*CQLPIYHFQRGNVM Trigger: CATCACATTGCCTCTCTGAAAGTGATAAATTGGCAGCTGGCACCAGGGAGAGGCTATTTCCTGATGGCCCACACCTGTTGCACTAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000509932.2 ENST00000652257.1 ENST00000657399.1 ENST00000659694.1 ENST00000665259.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS TCA 90 bp | GAACTAACTCACTCTCACAAGAACACATGGGAGGAACTGCCCCTATaGTTCAATTACTTCCCACCAGTTCTCTCTGTCCACACCTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: ELTHSHKNTWEELPL*FNYFPPVLSVHTWG Trigger: TCCCCAGGTGTGGACAGAGAGAACTGGTGGGAAGTAATTGAATCATAGGGGCAGTTCCTCCCATGTGTTCTTGTGAGAGTGAGTTAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667167.1 |
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| CDS GCA 90 bp | ATTTATTCCTATTTTCAGAGAGCTGTCCCCAGCGGTTCTGCAGGCTaGATAACAAACATGGTGCCAGCCTCTGCTTCTGGTGAGGAACTT | + |
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Preference number: 5 (lower is better) Translates to: IYSYFQRAVPSGSAG*ITNMVPASASGEEL Trigger: AAGTTCCTCACCAGAAGCAGAGGCTGGCACCATGTTTGTTATGCAGCCTGCAGAACCGCTGGGGACAGCTCTCTGAAAATAGGAATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000670052.1 |
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| CDS TCA 90 bp | AGTTCTCTCTGTCCACACCTGGGGATTATAATTCAAGATGAGATATaGGTGGAGACACAAATCATTCTGCCCCGATCCCTCCCAAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SSLCPHLGIIIQDEI*VETQIILPRSLPKL Trigger: GAGCTTTGGGAGGGATCGGGGCAGAATGATTTGTGTCTCCACTCATATCTCATCTTGAATTATAATCCCCAGGTGTGGACAGAGAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667167.1 |
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| CDS CCA 90 bp | GCAGGGAAGAGAGAGTGCATGAGTGCAAGAGAGGGCAGGAAAAACTaGCTTAAACCACCTGATCTCAAAAGAACTAACTCACTCTCACAA | + |
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Preference number: 5 (lower is better) Translates to: AGKRECMSAREGRKN*LKPPDLKRTNSLSQ Trigger: TTGTGAGAGTGAGTTAGTTCTTTTGAGATCAGGTGGTTTAAGCCAGTTTTTCCTGCCCTCTCTTGCACTCATGCACTCTCTCTTCCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667167.1 |
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| CDS CCA 90 bp | CTGCTTCGATGGCTGACTTGTTCAGTAGAAATCTTTATAGATGTCTaGGGAGTGACACTGCATAATCTCTTACTTTTGTTCCAGGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLRWLTCSVEIFIDV*GVTLHNLLLLFQGS Trigger: GGAGCCCTGGAACAAAAGTAAGAGATTATGCAGTGTCACTCCCCAGACATCTATAAAGATTTCTACTGAACAAGTCAGCCATCGAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509932.2 |
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| CDS CCA 90 bp | AAGGAAAGCAGTCCGAGTTCCAAATCTGAAGTACTTGGAGTTCGATaGTCTGAACTCCTATTTCTCAATATCTGCTGCAGAGCAGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: KESSPSSKSEVLGVR*SELLFLNICCRAVS Trigger: TGAAACTGCTCTGCAGCAGATATTGAGAAATAGGAGTTCAGACCATCGAACTCCAAGTACTTCAGATTTGGAACTCGGACTGCTTTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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| CDS GCA 90 bp | ATAATTTCAAGTTGGCGACCTTCTCTTTTTCTGGCTCTTTTCCTGTaGAGTGTGTATTCTCACTTACTAGCAGCTATGGTTGTCCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: IISSWRPSLFLALFL*SVYSHLLAAMVVPN Trigger: GTTTGGGACAACCATAGCTGCTAGTAAGTGAGAATACACACTGCACAGGAAAAGAGCCAGAAAAAGAGAAGGTCGCCAACTTGAAATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS GCA 90 bp | CTCTTGCAATGTATCCATATTCTGATCTCATTCTCTAATTTTTACTaGCATTTTGTCTCTTACGCACATGCCCAGGAAGTTGTTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LLQCIHILISFSNFY*HFVSYAHAQEVVSP Trigger: GGGAGAAACAACTTCCTGGGCATGTGCGTAAGAGACAAAATGGCAGTAAAAATTAGAGAATGAGATCAGAATATGGATACATTGCAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000509932.2 ENST00000659694.1 ENST00000665259.1 |
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| CDS GCA 90 bp | TCCCAAACTCTCTCTTCTAGTACACCTTTAAAATCAGAAAGACAATaGCCTTTCTATCGCAGTTTTGGCTACTATCCATGGCATGGTTTA | + |
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Preference number: 5 (lower is better) Translates to: SQTLSSSTPLKSERQ*PFYRSFGYYPWHGL Trigger: TAAACCATGCCATGGATAGTAGCCAAAACTGCGATAGAAAGGGCATTGTCTTTCTGATTTTAAAGGTGTACTAGAAGAGAGAGTTTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS CCA 90 bp | ATTTCTCAATATCTGCTGCAGAGCAGTTTCATAGGTCAACACCCATaGGCCACCGATATAAAAATCACCAGAGACATTGGTAAAATATCT | + |
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Preference number: 5 (lower is better) Translates to: ISQYLLQSSFIGQHP*ATDIKITRDIGKIS Trigger: AGATATTTTACCAATGTCTCTGGTGATTTTTATATCGGTGGCCCATGGGTGTTGACCTATGAAACTGCTCTGCAGCAGATATTGAGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000509932.2 ENST00000652257.1 ENST00000657399.1 ENST00000667167.1 ENST00000670052.1 |
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| CDS CCA 90 bp | CTGCTTCGATGGCTGACTTGTTCAGTAGAAATCTTTATAGATGTCTaGGGAGTGACACTGCATAATCTGTATTACTCTTACTTTTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: LLRWLTCSVEIFIDV*GVTLHNLYYSYFCS Trigger: GGAACAAAAGTAAGAGTAATACAGATTATGCAGTGTCACTCCCCAGACATCTATAAAGATTTCTACTGAACAAGTCAGCCATCGAAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659694.1 |
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| CDS CCA 90 bp | TACACCTTTAAAATCAGAAAGACAATGCCCTTTCTATCGCAGTTTTaGCTACTATCCATGGCATGGTTTAGAACTGCCTTTAGTCTAACA | + |
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Preference number: 5 (lower is better) Translates to: YTFKIRKTMPFLSQF*LLSMAWFRTAFSLT Trigger: TGTTAGACTAAAGGCAGTTCTAAACCATGCCATGGATAGTAGCCAAAACTGCGATAGAAAGGGCATTGTCTTTCTGATTTTAAAGGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS CCA 90 bp | AAACACATAATTAGTGTAAACAGTTTGAACATTATTTTTACCACATaGACGGAGGTGTCAGACATACAGAAGCACTCTTCTCAGGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: KHIISVNSLNIIFTT*TEVSDIQKHSSQAE Trigger: TTCTGCCTGAGAAGAGTGCTTCTGTATGTCTGACACCTCCGTCCATGTGGTAAAAATAATGTTCAAACTGTTTACACTAATTATGTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS GCA 90 bp | TTAATTTTAGCCATTCCTAGAGGGTGTGTAATGATATCACAATGTTaGTTTAATGTACCATTCCCTACTTACTTAGTGATGCTGAACAGT | + |
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Preference number: 5 (lower is better) Translates to: LILAIPRGCVMISQC*FNVPFPTYLVMLNS Trigger: ACTGTTCAGCATCACTAAGTAAGTAGGGAATGGTACATTAAAGCAACATTGTGATATCATTACACACCCTCTAGGAATGGCTAAAATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS CCA 90 bp | TTTCCCATTTCTATTTTTAGTCTAGATAATTCTCAGGTATCTTTCTaGCATAACTTAATGGCTACTTCTTTCAGGATGCCTTATTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: FPISIFSLDNSQVSF*HNLMATSFRMPYLP Trigger: GGGCAAATAAGGCATCCTGAAAGAAGTAGCCATTAAGTTATGCCAGAAAGATACCTGAGAATTATCTAGACTAAAAATAGAAATGGGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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| CDS GCA 72 bp | CCCTTTCCCAGGATGCTTCCCTTAGGATGGGCTGCCTaGATGTGCAGTGCCCTCCTTACCCTTGGGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PFPRMLPLGWAA*MCSALLTLGRR Trigger: TCTCCTCCCAAGGGTAAGGAGGGCACTGCACATGCAGGCAGCCCATCCTAAGGGAAGCATCCTGGGAAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000652257.1 ENST00000657399.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS GCA 72 bp | TTGTGGGTGGGGGACAGCCGTCTCCTGCTCCACTCATaGTCGTCTCACTACGGAATTGGATGCCAGGGGATG | + |
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Preference number: 6 (lower is better) Translates to: LWVGDSRLLLHS*SSHYGIGCQGM Trigger: CATCCCCTGGCATCCAATTCCGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGCTGTCCCCCACCCACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665259.1 |
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| CDS GCA 72 bp | TTGTGGGTGGGGGACAGCCGTCTCCTGCTCCACTCATaGTCGTCTCACTACGGTTCTGCAGGCTGCATAACA | + |
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Preference number: 6 (lower is better) Translates to: LWVGDSRLLLHS*SSHYGSAGCIT Trigger: TGTTATGCAGCCTGCAGAACCGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGCTGTCCCCCACCCACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659694.1 |
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| CDS GCA 72 bp | TCTGATATTCCTTGTGGGTGGGGGACAGCCGTCTCCTaGTCCACTCATGCTCGTCTCACTACGGTTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SDIPCGWGTAVS*STHARLTTVLQ Trigger: CTGCAGAACCGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGCTGTCCCCCACCCACAAGGAATATCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659694.1 |
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| CDS GCA 72 bp | TCTCCTGCTCCACTCATGCTCGTCTCACTACGGTTCTaGAGGCTGCATAACAAACATGGTGCCAGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SPAPLMLVSLRF*RLHNKHGASLC Trigger: GCAGAGGCTGGCACCATGTTTGTTATGCAGCCTGCAGAACCGTAGTGAGACGAGCATGAGTGGAGCAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659694.1 |
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| CDS GCA 72 bp | TTGTGGGTGGGGGACAGCCGTCTCCTGCTCCACTCATaGTCGTCTCACTACATAATCACAAGGTCCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: LWVGDSRLLLHS*SSHYIITRSHN Trigger: ATTGTGGGACCTTGTGATTATGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGCTGTCCCCCACCCACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000509932.2 ENST00000652257.1 ENST00000657399.1 ENST00000665528.1 |
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| CDS GCA 72 bp | CTCCACTCATGCTCGTCTCACTACGGTTCTGCAGGCTaGATAACAAACATGGTGCCAGCCTCTGCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LHSCSSHYGSAG*ITNMVPASASG Trigger: ACCAGAAGCAGAGGCTGGCACCATGTTTGTTATGCAGCCTGCAGAACCGTAGTGAGACGAGCATGAGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659694.1 |
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| CDS GCA 72 bp | TCTGATATTCCTTGTGGGTGGGGGACAGCCGTCTCCTaGTCCACTCATGCTCGTCTCACTACGGAATTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SDIPCGWGTAVS*STHARLTTELD Trigger: ATCCAATTCCGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGCTGTCCCCCACCCACAAGGAATATCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665259.1 |
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| CDS CCA 72 bp | GCAACAGGTGTGGGCCATCAGGAAATAGCCTCTCCCTaGTGCCAGCTGCCAATTTATCACTTTCAGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ATGVGHQEIASP*CQLPIYHFQRG Trigger: GCCTCTCTGAAAGTGATAAATTGGCAGCTGGCACCAGGGAGAGGCTATTTCCTGATGGCCCACACCTGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000509932.2 ENST00000652257.1 ENST00000657399.1 ENST00000659694.1 ENST00000665259.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS CAA 72 bp | CTCAGGCAGAATATTCCAGAGCCTCGGAGCTCATTTTaGAGGAGCCAGCCAAGGGCCCACCCTGAAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LRQNIPEPRSSF*RSQPRAHPEER Trigger: TCTTTCTTCAGGGTGGGCCCTTGGCTGGCTCCTCAAAAATGAGCTCCGAGGCTCTGGAATATTCTGCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS CAA 90 bp | GGGACAGCCGTCTCCTGCTCCACTCATGCTCGTCTCACTACGGAATaGGATGCCAGGGGATGTGGTGATAATGACTATAGCTCTCACTTC | + |
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Preference number: 6 (lower is better) Translates to: GTAVSCSTHARLTTE*DARGCGDNDYSSHF Trigger: GAAGTGAGAGCTATAGTCATTATCACCACATCCCCTGGCATCCAATTCCGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGCTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665259.1 |
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| CDS TCA 72 bp | TCAGGCAGAATATTCCAGAGCCTCGGAGCTCATTTTTaGGGAGCCAGCCAAGGGCCCACCCTGAAGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SGRIFQSLGAHF*GASQGPTLKKD Trigger: ATCTTTCTTCAGGGTGGGCCCTTGGCTGGCTCCTCAAAAATGAGCTCCGAGGCTCTGGAATATTCTGCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS GCA 72 bp | TATTTTCAGAGAGCTGTCCCCAGCGGTTCTGCAGGCTaGATAACAAACATGGTGCCAGCCTCTGCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: YFQRAVPSGSAG*ITNMVPASASG Trigger: ACCAGAAGCAGAGGCTGGCACCATGTTTGTTATGCAGCCTGCAGAACCGCTGGGGACAGCTCTCTGAAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000509932.2 ENST00000652257.1 ENST00000670052.1 |
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| CDS GCA 72 bp | TTGTGGGTGGGGGACAGCCGTCTCCTGCTCCACTCATaGTCGTCTCACTACCTGAACTCCTATTTCTCAATA | + |
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Preference number: 6 (lower is better) Translates to: LWVGDSRLLLHS*SSHYLNSYFSI Trigger: TATTGAGAAATAGGAGTTCAGGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGCTGTCCCCCACCCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670052.1 |
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| CDS CAA 90 bp | AGCACTCTTCTCAGGCAGAATATTCCAGAGCCTCGGAGCTCATTTTaGAGGAGCCAGCCAAGGGCCCACCCTGAAGAAAGATGCTTATGG | + |
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Preference number: 6 (lower is better) Translates to: STLLRQNIPEPRSSF*RSQPRAHPEERCLW Trigger: CCATAAGCATCTTTCTTCAGGGTGGGCCCTTGGCTGGCTCCTCAAAAATGAGCTCCGAGGCTCTGGAATATTCTGCCTGAGAAGAGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS TCA 72 bp | GCCGTCTCCTGCTCCACTCATGCTCGTCTCACTACCTaGACTCCTATTTCTCAATATCTGCTGCAGAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: AVSCSTHARLTT*TPISQYLLQSS Trigger: ACTGCTCTGCAGCAGATATTGAGAAATAGGAGTTCAGGTAGTGAGACGAGCATGAGTGGAGCAGGAGACGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670052.1 |
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| CDS GCA 72 bp | TTATTCCTATTTTCAGAGAGCTGTCCCCAGCGGTTCTaGAGGCTGCATAACAAACATGGTGCCAGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LFLFSESCPQRF*RLHNKHGASLC Trigger: GCAGAGGCTGGCACCATGTTTGTTATGCAGCCTGCAGAACCGCTGGGGACAGCTCTCTGAAAATAGGAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000509932.2 ENST00000652257.1 ENST00000667167.1 ENST00000670052.1 |
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| CDS GCA 72 bp | ACAGGTGTGGGCCATCAGGAAATAGCCTCTCCCTGGTaGCAGCTGCCAATTTATCACTTTCAGAGAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: TGVGHQEIASPW*QLPIYHFQRGN Trigger: ATTGCCTCTCTGAAAGTGATAAATTGGCAGCTGGCACCAGGGAGAGGCTATTTCCTGATGGCCCACACCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000509932.2 ENST00000652257.1 ENST00000657399.1 ENST00000659694.1 ENST00000665259.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS CAA 72 bp | CTGGTGGAGTGTCCCCAGAAGGTCATACCTGCCATTTaGTCTCTTACGCACATGCCCAGGAAGTTGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LVECPQKVIPAI*SLTHMPRKLFL Trigger: GAGAAACAACTTCCTGGGCATGTGCGTAAGAGACAAAATGGCAGGTATGACCTTCTGGGGACACTCCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000652257.1 ENST00000657399.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS CAA 72 bp | GTCTCCTGCTCCACTCATGCTCGTCTCACTACGGAATaGGATGCCAGGGGATGTGGTGATAATGACTATAGC | + |
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Preference number: 6 (lower is better) Translates to: VSCSTHARLTTE*DARGCGDNDYS Trigger: GCTATAGTCATTATCACCACATCCCCTGGCATCCAATTCCGTAGTGAGACGAGCATGAGTGGAGCAGGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665259.1 |
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| CDS TCA 72 bp | AGGCAGCAGGTATACACAGAAGCCTTGGGTCTACAGTaGGTTAGTTCTCCAAGGTTCAGTACAACTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RQQVYTEALGLQ*VSSPRFSTTAQ Trigger: CTGGGCAGTTGTACTGAACCTTGGAGAACTAACTCACTGTAGACCCAAGGCTTCTGTGTATACCTGCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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| CDS CCA 72 bp | GAGAGGTGCCAGGCCCTTTTTGTCAATCAGTTTCAGTaGGAACTAACAAAGCAGGAACTCAGTCACCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ERCQALFVNQFQ*ELTKQELSHPC Trigger: ACAGGGGTGACTGAGTTCCTGCTTTGTTAGTTCCCACTGAAACTGATTGACAAAAAGGGCCTGGCACCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000665528.1 |
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| CDS CCA 72 bp | TCTCCTGCTCCACTCATGCTCGTCTCACTACGGAATTaGATGCCAGGGGATGTGGTGATAATGACTATAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPAPLMLVSLRN*MPGDVVIMTIA Trigger: AGCTATAGTCATTATCACCACATCCCCTGGCATCCAATTCCGTAGTGAGACGAGCATGAGTGGAGCAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665259.1 |
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| CDS TCA 72 bp | GAGCTCATTTTTGAGGAGCCAGCCAAGGGCCCACCCTaGAGAAAGATGCTTATGGGAAATATACAGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: ELIFEEPAKGPP*RKMLMGNIQGL Trigger: CAAACCCTGTATATTTCCCATAAGCATCTTTCTTCAGGGTGGGCCCTTGGCTGGCTCCTCAAAAATGAGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS TCA 72 bp | GCATATTTTACAGGGTGGCAGGGAAGAGAGAGTGCATaGGTGCAAGAGAGGGCAGGAAAAACTGGCTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: AYFTGWQGRESA*VQERAGKTGLN Trigger: GTTTAAGCCAGTTTTTCCTGCCCTCTCTTGCACTCATGCACTCTCTCTTCCCTGCCACCCTGTAAAATATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667167.1 |
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| CDS TCA 72 bp | GCACTTTGCTCTGGGTTTTATACCCTAGTCCCCAGCTaGGTCACTGTGCTGAAGCACTGTAGAACATCATAT | + |
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Preference number: 6 (lower is better) Translates to: ALCSGFYTLVPS*VTVLKHCRTSY Trigger: ATATGATGTTCTACAGTGCTTCAGCACAGTGACTCAGCTGGGGACTAGGGTATAAAACCCAGAGCAAAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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| CDS GCA 72 bp | AGAAGGTCATACCTGCCATTTTGTCTCTTACGCACATaGCCAGGAAGTTGTTTCTCCCTGGAATCTGCATTC | + |
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Preference number: 6 (lower is better) Translates to: RRSYLPFCLLRT*PGSCFSLESAF Trigger: GAATGCAGATTCCAGGGAGAAACAACTTCCTGGGCATGTGCGTAAGAGACAAAATGGCAGGTATGACCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000652257.1 ENST00000657399.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS CCA 72 bp | AAGGTACATGGGATAAAGTCTAGAAGACATGAAGCATaGGCTTCTAGGTGTCCTCCCACAGTGGAGTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: KVHGIKSRRHEA*ASRCPPTVESY Trigger: ATAGGACTCCACTGTGGGAGGACACCTAGAAGCCCATGCTTCATGTCTTCTAGACTTTATCCCATGTACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS TCA 72 bp | TGTCCACACCTGGGGATTATAATTCAAGATGAGATATaGGTGGAGACACAAATCATTCTGCCCCGATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: CPHLGIIIQDEI*VETQIILPRSL Trigger: GAGGGATCGGGGCAGAATGATTTGTGTCTCCACTCATATCTCATCTTGAATTATAATCCCCAGGTGTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667167.1 |
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| CDS GCA 72 bp | GAGAGTGTGAGCAGTGTGTTTAGGAAGTTATATGCATaGCCATCTGAGGTTTTCTTCCCTTTTCTGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: ESVSSVFRKLYA*PSEVFFPFLVE Trigger: CTCCACCAGAAAAGGGAAGAAAACCTCAGATGGGCATGCATATAACTTCCTAAACACACTGCTCACACTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000652257.1 ENST00000657399.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS GCA 72 bp | TTCAAGATGAGATATGAGTGGAGACACAAATCATTCTaGCCCGATCCCTCCCAAAGCTCATGTCCTGACATT | + |
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Preference number: 6 (lower is better) Translates to: FKMRYEWRHKSF*PDPSQSSCPDI Trigger: AATGTCAGGACATGAGCTTTGGGAGGGATCGGGGCAGAATGATTTGTGTCTCCACTCATATCTCATCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667167.1 |
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| CDS CCA 72 bp | TATCTGCTGCAGAGCAGTTTCATAGGTCAACACCCATaGGCCACCGATATAAAAATCACCAGAGACATTGGT | + |
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Preference number: 6 (lower is better) Translates to: YLLQSSFIGQHP*ATDIKITRDIG Trigger: ACCAATGTCTCTGGTGATTTTTATATCGGTGGCCCATGGGTGTTGACCTATGAAACTGCTCTGCAGCAGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000509932.2 ENST00000652257.1 ENST00000657399.1 ENST00000667167.1 ENST00000670052.1 |
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| CDS CAA 72 bp | CCTGCCATTTTGTCTCTTACGCACATGCCCAGGAAGTaGTTTCTCCCTGGAATCTGCATTCGATTAACATCT | + |
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Preference number: 6 (lower is better) Translates to: PAILSLTHMPRK*FLPGICIRLTS Trigger: AGATGTTAATCGAATGCAGATTCCAGGGAGAAACAACTTCCTGGGCATGTGCGTAAGAGACAAAATGGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000652257.1 ENST00000657399.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS TCA 72 bp | TTCTCTCTGTCCACACCTGGGGATTATAATTCAAGATaGGATATGAGTGGAGACACAAATCATTCTGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: FSLSTPGDYNSR*DMSGDTNHSAP Trigger: CGGGGCAGAATGATTTGTGTCTCCACTCATATCTCATCTTGAATTATAATCCCCAGGTGTGGACAGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667167.1 |
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| CDS CCA 72 bp | AGAGAGTGCATGAGTGCAAGAGAGGGCAGGAAAAACTaGCTTAAACCACCTGATCTCAAAAGAACTAACTCA | + |
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Preference number: 6 (lower is better) Translates to: RECMSAREGRKN*LKPPDLKRTNS Trigger: TGAGTTAGTTCTTTTGAGATCAGGTGGTTTAAGCCAGTTTTTCCTGCCCTCTCTTGCACTCATGCACTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667167.1 |
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| CDS CAA 72 bp | ACTGCCATTTTGTCTCTTACGCACATGCCCAGGAAGTaGTTTCTCCCTGGAATCTGCATTCGATTAACATCT | + |
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Preference number: 6 (lower is better) Translates to: TAILSLTHMPRK*FLPGICIRLTS Trigger: AGATGTTAATCGAATGCAGATTCCAGGGAGAAACAACTTCCTGGGCATGTGCGTAAGAGACAAAATGGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000509932.2 ENST00000659694.1 ENST00000665259.1 |
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| CDS CAA 72 bp | ACCGTAATCTCCATAAAAGCAGGGGCTATTGTCATCTaGCTCACCGTTAAACAGCTAGTACCTGAAACCTGT | + |
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Preference number: 6 (lower is better) Translates to: TVISIKAGAIVI*LTVKQLVPETC Trigger: ACAGGTTTCAGGTACTAGCTGTTTAACGGTGAGCAAGATGACAATAGCCCCTGCTTTTATGGAGATTACGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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| CDS TCA 72 bp | AATAGAACACCAAACATATGGCCAGTAGAAGGTATCTaGGTTACCGATGGTGAATCTGTATGGGAATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: NRTPNIWPVEGI*VTDGESVWECS Trigger: GCTGCATTCCCATACAGATTCACCATCGGTAACTCAGATACCTTCTACTGGCCATATGTTTGGTGTTCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670052.1 |
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| CDS CCA 72 bp | AGAAGAGACCCAAGTGGGCAACTTGAAGGTCTAATGTaGTGTTTAATCTTGATCCCAGAACCATATAGACTG | + |
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Preference number: 6 (lower is better) Translates to: RRDPSGQLEGLM*CLILIPEPYRL Trigger: CAGTCTATATGGTTCTGGGATCAAGATTAAACACCACATTAGACCTTCAAGTTGCCCACTTGGGTCTCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652257.1 ENST00000665528.1 ENST00000670052.1 |
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| CDS CCA 72 bp | AGTCCGAGTTCCAAATCTGAAGTACTTGGAGTTCGATaGTCTGAACTCCTATTTCTCAATATCTGCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SPSSKSEVLGVR*SELLFLNICCR Trigger: TCTGCAGCAGATATTGAGAAATAGGAGTTCAGACCATCGAACTCCAAGTACTTCAGATTTGGAACTCGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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| CDS CAA 72 bp | GCAAGGAAAGCAGTCCGAGTTCCAAATCTGAAGTACTaGGAGTTCGATGGTCTGAACTCCTATTTCTCAATA | + |
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Preference number: 6 (lower is better) Translates to: ARKAVRVPNLKY*EFDGLNSYFSI Trigger: TATTGAGAAATAGGAGTTCAGACCATCGAACTCCAAGTACTTCAGATTTGGAACTCGGACTGCTTTCCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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| CDS CAA 72 bp | ATACATGTGATGTATTTCCAGTCAGGAAGCTCAATCTaGCCTTGGTCTTCAGAGGTTTTATTAGGGGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: IHVMYFQSGSSI*PWSSEVLLGVS Trigger: ACTGACCCCTAATAAAACCTCTGAAGACCAAGGCAAGATTGAGCTTCCTGACTGGAAATACATCACATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS TCA 72 bp | TCTCTTATTTTGTCATCCTTCTCGTCTTGGATTAGTTaGAGTGGGAATGTGTTTGCAGTCACACATGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: SLILSSFSSWIS*SGNVFAVTHAV Trigger: TACAGCATGTGTGACTGCAAACACATTCCCACTTCAACTAATCCAAGACGAGAAGGATGACAAAATAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000509932.2 ENST00000652257.1 ENST00000667167.1 ENST00000670052.1 |
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| CDS TCA 72 bp | TATATTTTGACTTCTGGCTTCCAGGAAAGCTGGAATTaGATTATTAATCGGAATTGGATGCCAGGGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: YILTSGFQESWN*IINRNWMPGDV Trigger: CACATCCCCTGGCATCCAATTCCGATTAATAATTCAATTCCAGCTTTCCTGGAAGCCAGAAGTCAAAATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665528.1 |
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| CDS CCA 72 bp | AAAATCAGAAAGACAATGCCCTTTCTATCGCAGTTTTaGCTACTATCCATGGCATGGTTTAGAACTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: KIRKTMPFLSQF*LLSMAWFRTAF Trigger: AAAGGCAGTTCTAAACCATGCCATGGATAGTAGCCAAAACTGCGATAGAAAGGGCATTGTCTTTCTGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS CCA 72 bp | TGGCTGACTTGTTCAGTAGAAATCTTTATAGATGTCTaGGGAGTGACACTGCATAATCTCTTACTTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: WLTCSVEIFIDV*GVTLHNLLLLF Trigger: GAACAAAAGTAAGAGATTATGCAGTGTCACTCCCCAGACATCTATAAAGATTTCTACTGAACAAGTCAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509932.2 |
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| CDS CCA 72 bp | TGGCTGACTTGTTCAGTAGAAATCTTTATAGATGTCTaGGGAGTGACACTGCATAATCTGTATTACTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: WLTCSVEIFIDV*GVTLHNLYYSY Trigger: GTAAGAGTAATACAGATTATGCAGTGTCACTCCCCAGACATCTATAAAGATTTCTACTGAACAAGTCAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659694.1 |
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| CDS CCA 72 bp | ATTAGTGTAAACAGTTTGAACATTATTTTTACCACATaGACGGAGGTGTCAGACATACAGAAGCACTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ISVNSLNIIFTT*TEVSDIQKHSS Trigger: AGAAGAGTGCTTCTGTATGTCTGACACCTCCGTCCATGTGGTAAAAATAATGTTCAAACTGTTTACACTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509932.2 ENST00000659694.1 |
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| CDS CAA 72 bp | TGCCTTATTTGCCCTTCTAGGTTAAGATATGTCCTATaGTATTCACCTGTATTATCTATCCTGTCACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: CLICPSRLRYVL*YSPVLSILSQH Trigger: ATGCTGTGACAGGATAGATAATACAGGTGAATACAATAGGACATATCTTAACCTAGAAGGGCAAATAAGGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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| CDS CAA 90 bp | CTTTCAGGATGCCTTATTTGCCCTTCTAGGTTAAGATATGTCCTATaGTATTCACCTGTATTATCTATCCTGTCACAGCATTTATGCATT | + |
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Preference number: 6 (lower is better) Translates to: LSGCLICPSRLRYVL*YSPVLSILSQHLCI Trigger: AATGCATAAATGCTGTGACAGGATAGATAATACAGGTGAATACAATAGGACATATCTTAACCTAGAAGGGCAAATAAGGCATCCTGAAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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| CDS CCA 72 bp | TCTATTTTTAGTCTAGATAATTCTCAGGTATCTTTCTaGCATAACTTAATGGCTACTTCTTTCAGGATGCCT | + |
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Preference number: 6 (lower is better) Translates to: SIFSLDNSQVSF*HNLMATSFRMP Trigger: AGGCATCCTGAAAGAAGTAGCCATTAAGTTATGCCAGAAAGATACCTGAGAATTATCTAGACTAAAAATAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657399.1 |
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