Pregenerated sensors for LINC02229 (Homo sapiens)

Ensembl gene IDs: ENSG00000250313

Ensembl transcript IDs: ENST00000508486.3

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCTCTGACCTGTCATGCCAACAGATTGCTCATGTTGGTAGAGCTCTaGATCCTAAACAGCCGCTCTGAAGCCCGAATTCACTCTATTCTG	+
Preference number: 5 (lower is better) Translates to: SLTCHANRLLMLVEL*ILNSRSEARIHSIL Trigger: CAGAATAGAGTGAATTCGGGCTTCAGAGCGGCTGTTTAGGATTCAGAGCTCTACCAACATGAGCAATCTGTTGGCATGACAGGTCAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508486.3
CDS GCA 90 bp	CCATCTACTTCCTTCCATGTCCTTCACGGCTTCTCTGACCTGTCATaGCAACAGATTGCTCATGTTGGTAGAGCTCTGAATCCTAAACAG	+
Preference number: 5 (lower is better) Translates to: PSTSFHVLHGFSDLS*QQIAHVGRALNPKQ Trigger: CTGTTTAGGATTCAGAGCTCTACCAACATGAGCAATCTGTTGGCATGACAGGTCAGAGAAGCCGTGAAGGACATGGAAGGAAGTAGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508486.3
CDS TCA 90 bp	TGCATCCACGGAAGTATGGAAACACTCACATTCCAGATATCAACCTaGGTTACAGAAGTTAAAACCTCTCCAAATACATCACCAATTTTC	+
Preference number: 5 (lower is better) Translates to: CIHGSMETLTFQIST*VTEVKTSPNTSPIF Trigger: GAAAATTGGTGATGTATTTGGAGAGGTTTTAACTTCTGTAACTCAGGTTGATATCTGGAATGTGAGTGTTTCCATACTTCCGTGGATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508486.3
CDS TCA 72 bp	TGTCATGCCAACAGATTGCTCATGTTGGTAGAGCTCTaGATCCTAAACAGCCGCTCTGAAGCCCGAATTCAC	+
Preference number: 6 (lower is better) Translates to: CHANRLLMLVEL*ILNSRSEARIH Trigger: GTGAATTCGGGCTTCAGAGCGGCTGTTTAGGATTCAGAGCTCTACCAACATGAGCAATCTGTTGGCATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508486.3
CDS GCA 72 bp	TCCTTCCATGTCCTTCACGGCTTCTCTGACCTGTCATaGCAACAGATTGCTCATGTTGGTAGAGCTCTGAAT	+
Preference number: 6 (lower is better) Translates to: SFHVLHGFSDLS*QQIAHVGRALN Trigger: ATTCAGAGCTCTACCAACATGAGCAATCTGTTGGCATGACAGGTCAGAGAAGCCGTGAAGGACATGGAAGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508486.3
CDS TCA 72 bp	GGAAGTATGGAAACACTCACATTCCAGATATCAACCTaGGTTACAGAAGTTAAAACCTCTCCAAATACATCA	+
Preference number: 6 (lower is better) Translates to: GSMETLTFQIST*VTEVKTSPNTS Trigger: TGATGTATTTGGAGAGGTTTTAACTTCTGTAACTCAGGTTGATATCTGGAATGTGAGTGTTTCCATACTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508486.3

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