Pregenerated sensors for LINC02228 (Homo sapiens)
Ensembl gene IDs: ENSG00000251273Ensembl transcript IDs: ENST00000507600.2, ENST00000641261.2, ENST00000641970.1, ENST00000662466.1, ENST00000670589.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGCCTCATTCTTTTCAATGGAGCATGTTATTGAGAACCAAGATCTaGGGGTTCAGTGTCCTCATTGCGATTAGGGTATCACTTGTACCA | + |
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Preference number: 5 (lower is better) Translates to: RPHSFQWSMLLRTKI*GFSVLIAIRVSLVP Trigger: TGGTACAAGTGATACCCTAATCGCAATGAGGACACTGAACCCCCAGATCTTGGTTCTCAATAACATGCTCCATTGAAAAGAATGAGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507600.2 ENST00000670589.1 |
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| CDS GCA 90 bp | CTTGTAAGTCAAAATTGCTCCTTGATCCATGTGCTGCAGAATGGATaGTGTGTTATGTATGCAAACAACATTGATCTCTTTGTAGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LVSQNCSLIHVLQNG*CVMYANNIDLFVGL Trigger: GAGCCCTACAAAGAGATCAATGTTGTTTGCATACATAACACAGCATCCATTCTGCAGCACATGGATCAAGGAGCAATTTTGACTTACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS TCA 90 bp | GTCATCCTGTCCTTTAAAGCTTTGAAACCAGGCAATGACTTCTTTTaGGCTATCAAAGTCCCAGATGACATCTTATTCCAACAGAAGATT | + |
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Preference number: 5 (lower is better) Translates to: VILSFKALKPGNDFF*AIKVPDDILFQQKI Trigger: AATCTTCTGTTGGAATAAGATGTCATCTGGGACTTTGATAGCTCAAAAGAAGTCATTGCCTGGTTTCAAAGCTTTAAAGGACAGGATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS GCA 90 bp | AAGAGAATAGAGCCTTGTTGTAGATTAGGCTTTGGCTTAAAAGAATaGTATGGCTTGCTTCATCCTCTATCCAGATCACTAATATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: KRIEPCCRLGFGLKE*YGLLHPLSRSLIFS Trigger: AGAAAATATTAGTGATCTGGATAGAGGATGAAGCAAGCCATAGCATTCTTTTAAGCCAAAGCCTAATCTACAACAAGGCTCTATTCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 90 bp | CCAAGATCTGGGGGTTCAGTGTCCTCATTGCGATTAGGGTATCACTaGTACCAGTTGCTTGGCCTCTCCCTCTGTCTGTTTCTCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PRSGGSVSSLRLGYH*YQLLGLSLCLFLCL Trigger: GAGACAGAGAAACAGACAGAGGGAGAGGCCAAGCAACTGGTACAAGTGATACCCTAATCGCAATGAGGACACTGAACCCCCAGATCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507600.2 ENST00000670589.1 |
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| CDS CAA 72 bp | GGGGGTTCAGTGTCCTCATTGCGATTAGGGTATCACTaGTACCAGTTGCTTGGCCTCTCCCTCTGTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GGSVSSLRLGYH*YQLLGLSLCLF Trigger: AAACAGACAGAGGGAGAGGCCAAGCAACTGGTACAAGTGATACCCTAATCGCAATGAGGACACTGAACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507600.2 ENST00000670589.1 |
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| CDS GCA 72 bp | TTCCACCTTCTTCCTGACACAGATTCCTCTTCACCATaGTTGTGCTCTGACATCCTGTGCCAAAACGGCATT | + |
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Preference number: 6 (lower is better) Translates to: FHLLPDTDSSSP*LCSDILCQNGI Trigger: AATGCCGTTTTGGCACAGGATGTCAGAGCACAAGCATGGTGAAGAGGAATCTGTGTCAGGAAGAAGGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507600.2 ENST00000670589.1 |
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| CDS CAA 90 bp | ACCAGCTCCAGAATCAGGCCTCATTCTTTTCAATGGAGCATGTTATaGAGAACCAAGATCTGGGGGTTCAGTGTCCTCATTGCGATTAGG | + |
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Preference number: 6 (lower is better) Translates to: TSSRIRPHSFQWSML*RTKIWGFSVLIAIR Trigger: CCTAATCGCAATGAGGACACTGAACCCCCAGATCTTGGTTCTCAATAACATGCTCCATTGAAAAGAATGAGGCCTGATTCTGGAGCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000507600.2 ENST00000670589.1 |
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| CDS CCA 72 bp | TGCACCAGCTCCAGAATCAGGCCTCATTCTTTTCAATaGAGCATGTTATTGAGAACCAAGATCTGGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: CTSSRIRPHSFQ*SMLLRTKIWGF Trigger: GAACCCCCAGATCTTGGTTCTCAATAACATGCTCCATTGAAAAGAATGAGGCCTGATTCTGGAGCTGGTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000507600.2 ENST00000670589.1 |
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| CDS CAA 72 bp | TCTGCAGCTTCCTCACCTCTCTCAGCCTTCACAGAATaGAAGAGAATAGAGCCTTGTTGTAGATTAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SAASSPLSAFTE*KRIEPCCRLGF Trigger: AAAGCCTAATCTACAACAAGGCTCTATTCTCTTCAATTCTGTGAAGGCTGAGAGAGGTGAGGAAGCTGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS TCA 72 bp | TGGTATTTTCACAACATCTGCAGTTACTTCCTCCACTaGAGTCTTGACTCATTCAAGGTCATCCATGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: WYFHNICSYFLH*SLDSFKVIHGV Trigger: AACCCCATGGATGACCTTGAATGAGTCAAGACTTCAGTGGAGGAAGTAACTGCAGATGTTGTGAAAATACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CCA 72 bp | TCTTTTCAATGGAGCATGTTATTGAGAACCAAGATCTaGGGGTTCAGTGTCCTCATTGCGATTAGGGTATCA | + |
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Preference number: 6 (lower is better) Translates to: SFQWSMLLRTKI*GFSVLIAIRVS Trigger: TGATACCCTAATCGCAATGAGGACACTGAACCCCCAGATCTTGGTTCTCAATAACATGCTCCATTGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507600.2 ENST00000670589.1 |
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| CDS CAA 72 bp | AGAATCAGGCCTCATTCTTTTCAATGGAGCATGTTATaGAGAACCAAGATCTGGGGGTTCAGTGTCCTCATT | + |
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Preference number: 6 (lower is better) Translates to: RIRPHSFQWSML*RTKIWGFSVLI Trigger: AATGAGGACACTGAACCCCCAGATCTTGGTTCTCAATAACATGCTCCATTGAAAAGAATGAGGCCTGATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000507600.2 ENST00000670589.1 |
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| CDS CAA 90 bp | GGAGGCCTTCTTATTCAGGATCCTTTCAGCTGCCAGTTTTGCCAGTaGCATATTGCTTCAGTCAGAATAAATTCTGGGATTTTCTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: GGLLIQDPFSCQFCQ*HIASVRINSGIFCS Trigger: ACTACAGAAAATCCCAGAATTTATTCTGACTGAAGCAATATGCAACTGGCAAAACTGGCAGCTGAAAGGATCCTGAATAAGAAGGCCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS GCA 72 bp | GGCCTTCTTATTCAGGATCCTTTCAGCTGCCAGTTTTaGCAGTTGCATATTGCTTCAGTCAGAATAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: GLLIQDPFSCQF*QLHIASVRINS Trigger: AGAATTTATTCTGACTGAAGCAATATGCAACTGGCAAAACTGGCAGCTGAAAGGATCCTGAATAAGAAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS GCA 72 bp | GAGCCTTGTTGTAGATTAGGCTTTGGCTTAAAAGAATaGTATGGCTTGCTTCATCCTCTATCCAGATCACTA | + |
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Preference number: 6 (lower is better) Translates to: EPCCRLGFGLKE*YGLLHPLSRSL Trigger: TAGTGATCTGGATAGAGGATGAAGCAAGCCATAGCATTCTTTTAAGCCAAAGCCTAATCTACAACAAGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS GCA 72 bp | AGTTATTCTGATGCAAAGATGGTCATCTTCCTACCCTaGTACCGGGTAAATTCTTCTGTCTTGCTCCTTATT | + |
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Preference number: 6 (lower is better) Translates to: SYSDAKMVIFLP*YRVNSSVLLLI Trigger: AATAAGGAGCAAGACAGAAGAATTTACCCGGTAGCAGGGTAGGAAGATGACCATCTTTGCATCAGAATAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662466.1 |
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| CDS CAA 90 bp | AAATTTTCCTCTGCAGCTTCCTCACCTCTCTCAGCCTTCACAGAATaGAAGAGAATAGAGCCTTGTTGTAGATTAGGCTTTGGCTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: KFSSAASSPLSAFTE*KRIEPCCRLGFGLK Trigger: TTTTAAGCCAAAGCCTAATCTACAACAAGGCTCTATTCTCTTCAATTCTGTGAAGGCTGAGAGAGGTGAGGAAGCTGCAGAGGAAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 90 bp | GGAGTTCTTCTTATTCAGGATCCTTTCAGCTGCCAGTTTTGCCAGTaGCATATTGCTTCAGTCAGAATAAATTCTGGGATTTTCTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: GVLLIQDPFSCQFCQ*HIASVRINSGIFCS Trigger: ACTACAGAAAATCCCAGAATTTATTCTGACTGAAGCAATATGCAACTGGCAAAACTGGCAGCTGAAAGGATCCTGAATAAGAAGAACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662466.1 |
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| CDS TCA 72 bp | CCCCTAACAAGAAAGTCATCCTGTCCTTTAAAGCTTTaGAACCAGGCAATGACTTCTTTTGAGCTATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: PLTRKSSCPLKL*NQAMTSFELSK Trigger: CTTTGATAGCTCAAAAGAAGTCATTGCCTGGTTTCAAAGCTTTAAAGGACAGGATGACTTTCTTGTTAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 72 bp | CTTATTCAGGATCCTTTCAGCTGCCAGTTTTGCCAGTaGCATATTGCTTCAGTCAGAATAAATTCTGGGATT | + |
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Preference number: 6 (lower is better) Translates to: LIQDPFSCQFCQ*HIASVRINSGI Trigger: AATCCCAGAATTTATTCTGACTGAAGCAATATGCAACTGGCAAAACTGGCAGCTGAAAGGATCCTGAATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000507600.2 ENST00000641261.2 ENST00000641970.1 ENST00000662466.1 ENST00000670589.1 |
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| CDS GCA 72 bp | ATCCTTCTTATTCAGGATCCTTTCAGCTGCCAGTTTTaGCAGTTGCATATTGCTTCAGTCAGAATAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: ILLIQDPFSCQF*QLHIASVRINS Trigger: AGAATTTATTCTGACTGAAGCAATATGCAACTGGCAAAACTGGCAGCTGAAAGGATCCTGAATAAGAAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507600.2 ENST00000670589.1 |
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| CDS GCA 72 bp | CAAAATTGCTCCTTGATCCATGTGCTGCAGAATGGATaGTGTGTTATGTATGCAAACAACATTGATCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: QNCSLIHVLQNG*CVMYANNIDLF Trigger: AAAGAGATCAATGTTGTTTGCATACATAACACAGCATCCATTCTGCAGCACATGGATCAAGGAGCAATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 72 bp | CTTTCCTCAGTAAACTTAATCATTTCTGACTTTCAGTaGAAAGCGAGAGACTTGCAACTCTTCCTTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: LSSVNLIISDFQ*KARDLQLFLSM Trigger: CATGGAAAGGAAGAGTTGCAAGTCTCTCGCTTTCAACTGAAAGTCAGAAATGATTAAGTTTACTGAGGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 72 bp | TTAACTGATGCAGGAGATCTAGTTTTTGGCCTGTCTTaGTGTTTTGGCATGCTTTCCTCAGTAAACTTAATC | + |
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Preference number: 6 (lower is better) Translates to: LTDAGDLVFGLS*CFGMLSSVNLI Trigger: GATTAAGTTTACTGAGGAAAGCATGCCAAAACACAAAGACAGGCCAAAAACTAGATCTCCTGCATCAGTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 90 bp | AGTAAACTTCTTATTCAGGATCCTTTCAGCTGCCAGTTTTGCCAGTaGCATATTGCTTCAGTCAGAATAAATTCTGGGATTTTCTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SKLLIQDPFSCQFCQ*HIASVRINSGIFCS Trigger: ACTACAGAAAATCCCAGAATTTATTCTGACTGAAGCAATATGCAACTGGCAAAACTGGCAGCTGAAAGGATCCTGAATAAGAAGTTTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641970.1 |
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| CDS CAA 90 bp | TTTGGCATGCTTTCCTCAGTAAACTTAATCATTTCTGACTTTCAGTaGAAAGCGAGAGACTTGCAACTCTTCCTTTCCATGGAACATTTA | + |
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Preference number: 6 (lower is better) Translates to: FGMLSSVNLIISDFQ*KARDLQLFLSMEHL Trigger: TAAATGTTCCATGGAAAGGAAGAGTTGCAAGTCTCTCGCTTTCAACTGAAAGTCAGAAATGATTAAGTTTACTGAGGAAAGCATGCCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 90 bp | GAGCCTTGTTGTAGATTAGGCTTTGGCTTAAAAGAATGCTATGGCTaGCTTCATCCTCTATCCAGATCACTAATATTTTCTCCATATCAT | + |
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Preference number: 6 (lower is better) Translates to: EPCCRLGFGLKECYG*LHPLSRSLIFSPYH Trigger: ATGATATGGAGAAAATATTAGTGATCTGGATAGAGGATGAAGCAAGCCATAGCATTCTTTTAAGCCAAAGCCTAATCTACAACAAGGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS TCA 72 bp | ATAACAAGTAGCACATTTAAACCAAGGTTCGCATGCTaGAAAAATATAGTCTTTTCAATGCGTCACCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ITSSTFKPRFAC*KNIVFSMRHPA Trigger: AGCAGGGTGACGCATTGAAAAGACTATATTTTTTCAGCATGCGAACCTTGGTTTAAATGTGCTACTTGTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641970.1 |
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| CDS TCA 72 bp | TCCTTTAAAGCTTTGAAACCAGGCAATGACTTCTTTTaGGCTATCAAAGTCCCAGATGACATCTTATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SFKALKPGNDFF*AIKVPDDILFQ Trigger: TTGGAATAAGATGTCATCTGGGACTTTGATAGCTCAAAAGAAGTCATTGCCTGGTTTCAAAGCTTTAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS GCA 72 bp | AAACTTCTTATTCAGGATCCTTTCAGCTGCCAGTTTTaGCAGTTGCATATTGCTTCAGTCAGAATAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: KLLIQDPFSCQF*QLHIASVRINS Trigger: AGAATTTATTCTGACTGAAGCAATATGCAACTGGCAAAACTGGCAGCTGAAAGGATCCTGAATAAGAAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641970.1 |
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| CDS CAA 72 bp | GTACATTTCTTAACTAATAACACTTGTAAGTCAAAATaGCTCCTTGATCCATGTGCTGCAGAATGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: VHFLTNNTCKSK*LLDPCAAEWML Trigger: CAGCATCCATTCTGCAGCACATGGATCAAGGAGCAATTTTGACTTACAAGTGTTATTAGTTAAGAAATGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 72 bp | GATGGCATTTTACCCACAATAGAACATCTTTCAAAATaGGATGGAGTCAATCCTTTCAAACCTTGCTACTTC | + |
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Preference number: 6 (lower is better) Translates to: DGILPTIEHLSK*DGVNPFKPCYF Trigger: GAAGTAGCAAGGTTTGAAAGGATTGACTCCATCCAATTTTGAAAGATGTTCTATTGTGGGTAAAATGCCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 90 bp | GGGTGGCTGCGGCAATTTCTTAAAATAAGAAAGCAATGCAGTTTGTaGCATTATTTGACTCTTCCTTTCATGAAATATTTATGTGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: GWLRQFLKIRKQCSL*HYLTLPFMKYLCVA Trigger: TGCTACACATAAATATTTCATGAAAGGAAGAGTCAAATAATGCAACAAACTGCATTGCTTTCTTATTTTAAGAAATTGCCGCAGCCACCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 72 bp | TGTAGATTAGGCTTTGGCTTAAAAGAATGCTATGGCTaGCTTCATCCTCTATCCAGATCACTAATATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: CRLGFGLKECYG*LHPLSRSLIFS Trigger: AGAAAATATTAGTGATCTGGATAGAGGATGAAGCAAGCCATAGCATTCTTTTAAGCCAAAGCCTAATCTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CAA 72 bp | GGTTTGGAATCCACTTCTTCCAAACTCCTGTTAACGTaGATGTTTTCACCTTTTTCCATAAATGATGAATGT | + |
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Preference number: 6 (lower is better) Translates to: GLESTSSKLLLT*MFSPFSINDEC Trigger: ACATTCATCATTTATGGAAAAAGGTGAAAACATCAACGTTAACAGGAGTTTGGAAGAAGTGGATTCCAAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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| CDS CCA 72 bp | CATTTTACCCACAATAGAACATCTTTCAAAATTGGATaGAGTCAATCCTTTCAAACCTTGCTACTTCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: HFTHNRTSFKIG*SQSFQTLLLPY Trigger: ATAAGGAAGTAGCAAGGTTTGAAAGGATTGACTCCATCCAATTTTGAAAGATGTTCTATTGTGGGTAAAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641261.2 |
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