Pregenerated sensors for LINC02227 (Homo sapiens)
Ensembl gene IDs: ENSG00000276778Ensembl transcript IDs: ENST00000619068.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCAGGGAAAGGGAACCTGGTGTGTTGGAGAACCAGAAAGAACTGTaGGTCAGAACACAAGGAGAAGAGGGAGCGAGAGGGGTTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: PREREPGVLENQKEL*VRTQGEEGARGVEV Trigger: GACCTCAACCCCTCTCGCTCCCTCTTCTCCTTGTGTTCTGACCCACAGTTCTTTCTGGTTCTCCAACACACCAGGTTCCCTTTCCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 90 bp | GGTCACCAAGTGCAAGGGACCCCAGGGAAAGGGAACCTGGTGTGTTaGAGAACCAGAAAGAACTGTGGGTCAGAACACAAGGAGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: GHQVQGTPGKGNLVC*RTRKNCGSEHKEKR Trigger: CCTCTTCTCCTTGTGTTCTGACCCACAGTTCTTTCTGGTTCTCCAACACACCAGGTTCCCTTTCCCTGGGGTCCCTTGCACTTGGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 90 bp | CCCCTGGCAGCTGGAGAGTGGACTCATGATCTAGGCTCAGACAACTaGATGTTCCTCTCTGGGCCTTTGGGTTGTGAGCCAGGATGTAAA | + |
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Preference number: 5 (lower is better) Translates to: PLAAGEWTHDLGSDN*MFLSGPLGCEPGCK Trigger: TTTACATCCTGGCTCACAACCCAAAGGCCCAGAGAGGAACATCCAGTTGTCTGAGCCTAGATCATGAGTCCACTCTCCAGCTGCCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 90 bp | AGGGAGCGAGAGGGGTTGAGGTCAGAGGTTGGCACAACCAAATCCTaGAGGGCCTCAAGTCATCATCTGTTCCTCATCCTAAGAACACTG | + |
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Preference number: 5 (lower is better) Translates to: REREGLRSEVGTTKS*RASSHHLFLILRTL Trigger: CAGTGTTCTTAGGATGAGGAACAGATGATGACTTGAGGCCCTGCAGGATTTGGTTGTGCCAACCTCTGACCTCAACCCCTCTCGCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 90 bp | CATTGGCTGGAGAATTTTCTGGAGCTCTCAGAAACTACCTGGCACTaGGCAGGAGGATTTTCAGGTCAGGGCCGACCTTTGAGGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: HWLENFLELSETTWH*AGGFSGQGRPLRNQ Trigger: CTGGTTCCTCAAAGGTCGGCCCTGACCTGAAAATCCTCCTGCCCAGTGCCAGGTAGTTTCTGAGAGCTCCAGAAAATTCTCCAGCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 90 bp | AGACAGCATTGGCTGGAGAATTTTCTGGAGCTCTCAGAAACTACCTaGCACTGGGCAGGAGGATTTTCAGGTCAGGGCCGACCTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: RQHWLENFLELSETT*HWAGGFSGQGRPLR Trigger: CCTCAAAGGTCGGCCCTGACCTGAAAATCCTCCTGCCCAGTGCCAGGTAGTTTCTGAGAGCTCCAGAAAATTCTCCAGCCAATGCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 90 bp | CCCTTCCAAAGTCCAGGATATCCAAGACAAAGGTGCCAGAAGATTTaGTGTTTGGTGAGGGCCTGCTGTCCATCCATGGGGTCTCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PFQSPGYPRQRCQKI*CLVRACCPSMGSPH Trigger: ATGAGGAGACCCCATGGATGGACAGCAGGCCCTCACCAAACACCAAATCTTCTGGCACCTTTGTCTTGGATATCCTGGACTTTGGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 90 bp | AGGACTGAGGCTCTGGCTTCCTTTTGGCTCTTTGCTATCAGCTGGTaGCCACTTTTGAGGCTGCCCTCAGTTCCATACCATATGGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: RTEALASFWLFAISW*PLLRLPSVPYHMGV Trigger: AACACCCATATGGTATGGAACTGAGGGCAGCCTCAAAAGTGGCCACCAGCTGATAGCAAAGAGCCAAAAGGAAGCCAGAGCCTCAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 90 bp | TGGAGGGAATCAATTATTCCTGGTGGTGGCTGCAACTTTCTGTGGTaGGGGCCTTGGTATCTAGCAGTGACTACGTTCTCTGCAGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: WRESIIPGGGCNFLW*GPWYLAVTTFSAGV Trigger: AACGCCTGCAGAGAACGTAGTCACTGCTAGATACCAAGGCCCTCACCACAGAAAGTTGCAGCCACCACCAGGAATAATTGATTCCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 90 bp | AGTGACTGGCTCACATTTTTGCCAGGCAGAGACAGAATTGAGATTTaGAGTGAGTCTGTGGGATCCGTGGGGGTGGGCCCATGTCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: SDWLTFLPGRDRIEI*SESVGSVGVGPCLF Trigger: AAAAAGACATGGGCCCACCCCCACGGATCCCACAGACTCACTTCAAATCTCAATTCTGTCTCTGCCTGGCAAAAATGTGAGCCAGTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 90 bp | CTATCCGTGGCGTGCAAAGTACTTTCATATCCTTCAGTGGGTATTTaGCATTGGGGGACTGCTCAGCACCCACATAATCCTTCAACCTGG | + |
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Preference number: 5 (lower is better) Translates to: LSVACKVLSYPSVGI*HWGTAQHPHNPSTW Trigger: CCAGGTTGAAGGATTATGTGGGTGCTGAGCAGTCCCCCAATGCCAAATACCCACTGAAGGATATGAAAGTACTTTGCACGCCACGGATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 90 bp | TATCTGCAGAAACCCTTCCAAAGTCCAGGATATCCAAGACAAAGGTaGCAGAAGATTTGGTGTTTGGTGAGGGCCTGCTGTCCATCCATG | + |
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Preference number: 5 (lower is better) Translates to: YLQKPFQSPGYPRQR*QKIWCLVRACCPSM Trigger: CATGGATGGACAGCAGGCCCTCACCAAACACCAAATCTTCTGGCACCTTTGTCTTGGATATCCTGGACTTTGGAAGGGTTTCTGCAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 90 bp | GTGAGCCAGGATGTAAATTTGGAGGGAATCAATTATTCCTGGTGGTaGCTGCAACTTTCTGTGGTGAGGGCCTTGGTATCTAGCAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: VSQDVNLEGINYSWW*LQLSVVRALVSSSD Trigger: GTCACTGCTAGATACCAAGGCCCTCACCACAGAAAGTTGCAGCCACCACCAGGAATAATTGATTCCCTCCAAATTTACATCCTGGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 90 bp | GTTATCCAGAGTTGGATTCTGACCACTAGAAATGCTTTATCTTATTaGAGTCCCATTCAGCACAGAGGGTGTAGGAGGCCAGATATCCGT | + |
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Preference number: 5 (lower is better) Translates to: VIQSWILTTRNALSY*SPIQHRGCRRPDIR Trigger: ACGGATATCTGGCCTCCTACACCCTCTGTGCTGAATGGGACTTCAATAAGATAAAGCATTTCTAGTGGTCAGAATCCAACTCTGGATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 90 bp | AATAACAGAATGAAGAGCCCTTTCTGTTATCTTCAGGGTCCTGCATaGTCTGGACATATGACTACTTCCCACACACATTTTCACATGGCC | + |
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Preference number: 5 (lower is better) Translates to: NNRMKSPFCYLQGPA*SGHMTTSHTHFHMA Trigger: GGCCATGTGAAAATGTGTGTGGGAAGTAGTCATATGTCCAGATCATGCAGGACCCTGAAGATAACAGAAAGGGCTCTTCATTCTGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 90 bp | TTGCTATTGGATTATCCTTCTCACTTCTTTCCACAGACTGTCCCCTaGTACGTGCCAAGTAAATCCATCCATTCTCATTTGCATTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: LLLDYPSHFFPQTVP*YVPSKSIHSHLHFG Trigger: TCCAAAATGCAAATGAGAATGGATGGATTTACTTGGCACGTAGCAGGGGACAGTCTGTGGAAAGAAGTGAGAAGGATAATCCAATAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 90 bp | CAAAGAGGAAGTCATCTGTCCCTCTCTGCCTATCATTTTTGGTATTaGATGAGGTGGGCTTTAGGGGATAATTATCGACAATCACTTCTT | + |
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Preference number: 5 (lower is better) Translates to: QRGSHLSLSAYHFWY*MRWALGDNYRQSLL Trigger: AAGAAGTGATTGTCGATAATTATCCCCTAAAGCCCACCTCATGCAATACCAAAAATGATAGGCAGAGAGGGACAGATGACTTCCTCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 90 bp | AACTGGAAGGTGAATCAAAGTAGAAATTCTGGTCATTTTATAGCTTaGCTAAACCATCGGAGGATGGCAAGATATGAGTCTCCTTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: NWKVNQSRNSGHFIA*LNHRRMARYESPLP Trigger: GGGCAAAGGAGACTCATATCTTGCCATCCTCCGATGGTTTAGCCAAGCTATAAAATGACCAGAATTTCTACTTTGATTCACCTTCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 90 bp | TGCAGGAAACAGACTCGTGAGAATAATTCGACTCCATATTCAGCCTaGAGGGTATATTATTATCTCTATTTGGTGGGTGAGAGACTATGT | + |
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Preference number: 5 (lower is better) Translates to: CRKQTRENNSTPYSA*RVYYYLYLVGERLC Trigger: ACATAGTCTCTCACCCACCAAATAGAGATAATAATATACCCTGCAGGCTGAATATGGAGTCGAATTATTCTCACGAGTCTGTTTCCTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 90 bp | TATGATACCTTTTGGAGTCTGTGGTCACCTGATAGTGCTTGGCTGTaGATTTTAGGAATTACAATTCAGCAACTGGAAGGTGAATCAAAG | + |
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Preference number: 5 (lower is better) Translates to: YDTFWSLWSPDSAWL*ILGITIQQLEGESK Trigger: CTTTGATTCACCTTCCAGTTGCTGAATTGTAATTCCTAAAATTCACAGCCAAGCACTATCAGGTGACCACAGACTCCAAAAGGTATCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 90 bp | AGTTCCATACCATATGGGTGTTCCAACAGGCTGTCTTATTTATTCTaGAATGTAAAAAGTATCTGCAGAAACCCTTCCAAAGTCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: SSIPYGCSNRLSYLF*NVKSICRNPSKVQD Trigger: ATCCTGGACTTTGGAAGGGTTTCTGCAGATACTTTTTACATTGCAGAATAAATAAGACAGCCTGTTGGAACACCCATATGGTATGGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 90 bp | ATTCGACTCCATATTCAGCCTGCAGGGTATATTATTATCTCTATTTaGTGGGTGAGAGACTATGTTCTACAGTATATCAGGGAATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: IRLHIQPAGYIIISI*WVRDYVLQYIREFL Trigger: CAGAAATTCCCTGATATACTGTAGAACATAGTCTCTCACCCACCAAATAGAGATAATAATATACCCTGCAGGCTGAATATGGAGTCGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 90 bp | ACTTCTAAAAATATCTTCCTGCTTCAGTTATCCAGAGTTGGATTCTaGCCACTAGAAATGCTTTATCTTATTGAAGTCCCATTCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: TSKNIFLLQLSRVGF*PLEMLYLIEVPFST Trigger: TGTGCTGAATGGGACTTCAATAAGATAAAGCATTTCTAGTGGTCAGAATCCAACTCTGGATAACTGAAGCAGGAAGATATTTTTAGAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 90 bp | ACTACCTGGCACTGGGCAGGAGGATTTTCAGGTCAGGGCCGACCTTaGAGGAACCAGCTCCCTCCCAACATGCCGGTGGCCAGCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: TTWHWAGGFSGQGRP*RNQLPPNMPVASQC Trigger: GCACTGGCTGGCCACCGGCATGTTGGGAGGGAGCTGGTTCCTCAAAGGTCGGCCCTGACCTGAAAATCCTCCTGCCCAGTGCCAGGTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | CACTGGGCAGGAGGATTTTCAGGTCAGGGCCGACCTTaGAGGAACCAGCTCCCTCCCAACATGCCGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: HWAGGFSGQGRP*RNQLPPNMPVA Trigger: GGCCACCGGCATGTTGGGAGGGAGCTGGTTCCTCAAAGGTCGGCCCTGACCTGAAAATCCTCCTGCCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 72 bp | CTGGAGCAGAACATTCTGGACAGGAGGGTCACCAAGTaGAAGGGACCCCAGGGAAAGGGAACCTGGTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LEQNILDRRVTK*KGPQGKGTWCV Trigger: AACACACCAGGTTCCCTTTCCCTGGGGTCCCTTGCACTTGGTGACCCTCCTGTCCAGAATGTTCTGCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | TGGGGGACTGCTCAGCACCCACATAATCCTTCAACCTaGGGGATGGAGGAAGGCAGTGCTTACCTCCCACTT | + |
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Preference number: 6 (lower is better) Translates to: WGTAQHPHNPST*GMEEGSAYLPL Trigger: AAGTGGGAGGTAAGCACTGCCTTCCTCCATCCCCCAGGTTGAAGGATTATGTGGGTGCTGAGCAGTCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 72 bp | CAAAGGTGCCAGAAGATTTGGTGTTTGGTGAGGGCCTaGTGTCCATCCATGGGGTCTCCTCATGGTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: QRCQKIWCLVRA*CPSMGSPHGGI Trigger: GATGCCACCATGAGGAGACCCCATGGATGGACAGCAGGCCCTCACCAAACACCAAATCTTCTGGCACCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | GTCACCAAGTGCAAGGGACCCCAGGGAAAGGGAACCTaGTGTGTTGGAGAACCAGAAAGAACTGTGGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: VTKCKGPQGKGT*CVGEPERTVGQ Trigger: CTGACCCACAGTTCTTTCTGGTTCTCCAACACACCAGGTTCCCTTTCCCTGGGGTCCCTTGCACTTGGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | TCCTGGTGGTGGCTGCAACTTTCTGTGGTGAGGGCCTaGGTATCTAGCAGTGACTACGTTCTCTGCAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: SWWWLQLSVVRA*VSSSDYVLCRR Trigger: ACGCCTGCAGAGAACGTAGTCACTGCTAGATACCAAGGCCCTCACCACAGAAAGTTGCAGCCACCACCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 90 bp | AAGAACTGTGGGTCAGAACACAAGGAGAAGAGGGAGCGAGAGGGGTaGAGGTCAGAGGTTGGCACAACCAAATCCTGCAGGGCCTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: KNCGSEHKEKREREG*RSEVGTTKSCRASS Trigger: ACTTGAGGCCCTGCAGGATTTGGTTGTGCCAACCTCTGACCTCAACCCCTCTCGCTCCCTCTTCTCCTTGTGTTCTGACCCACAGTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | GAGGCTCTGGCTTCCTTTTGGCTCTTTGCTATCAGCTaGTGGCCACTTTTGAGGCTGCCCTCAGTTCCATAC | + |
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Preference number: 6 (lower is better) Translates to: EALASFWLFAIS*WPLLRLPSVPY Trigger: GTATGGAACTGAGGGCAGCCTCAAAAGTGGCCACCAGCTGATAGCAAAGAGCCAAAAGGAAGCCAGAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | AAATCCAGACATTCAGAGGTCTGGAGCAGAACATTCTaGACAGGAGGGTCACCAAGTGCAAGGGACCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: KSRHSEVWSRTF*TGGSPSARDPR Trigger: CCTGGGGTCCCTTGCACTTGGTGACCCTCCTGTCCAGAATGTTCTGCTCCAGACCTCTGAATGTCTGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | GCTGGAGAGTGGACTCATGATCTAGGCTCAGACAACTaGATGTTCCTCTCTGGGCCTTTGGGTTGTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AGEWTHDLGSDN*MFLSGPLGCEP Trigger: TGGCTCACAACCCAAAGGCCCAGAGAGGAACATCCAGTTGTCTGAGCCTAGATCATGAGTCCACTCTCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | TGGCTGGAGAATTTTCTGGAGCTCTCAGAAACTACCTaGCACTGGGCAGGAGGATTTTCAGGTCAGGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: WLENFLELSETT*HWAGGFSGQGR Trigger: TCGGCCCTGACCTGAAAATCCTCCTGCCCAGTGCCAGGTAGTTTCTGAGAGCTCCAGAAAATTCTCCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 90 bp | CAAAGTCCAGGATATCCAAGACAAAGGTGCCAGAAGATTTGGTGTTaGGTGAGGGCCTGCTGTCCATCCATGGGGTCTCCTCATGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QSPGYPRQRCQKIWC*VRACCPSMGSPHGG Trigger: GCCACCATGAGGAGACCCCATGGATGGACAGCAGGCCCTCACCAAACACCAAATCTTCTGGCACCTTTGTCTTGGATATCCTGGACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 72 bp | CTCACATTTTTGCCAGGCAGAGACAGAATTGAGATTTaGAGTGAGTCTGTGGGATCCGTGGGGGTGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LTFLPGRDRIEI*SESVGSVGVGP Trigger: TGGGCCCACCCCCACGGATCCCACAGACTCACTTCAAATCTCAATTCTGTCTCTGCCTGGCAAAAATGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 72 bp | GAGGGGTTGAGGTCAGAGGTTGGCACAACCAAATCCTaGAGGGCCTCAAGTCATCATCTGTTCCTCATCCTA | + |
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Preference number: 6 (lower is better) Translates to: EGLRSEVGTTKS*RASSHHLFLIL Trigger: TAGGATGAGGAACAGATGATGACTTGAGGCCCTGCAGGATTTGGTTGTGCCAACCTCTGACCTCAACCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | AGTCCAGGATATCCAAGACAAAGGTGCCAGAAGATTTaGTGTTTGGTGAGGGCCTGCTGTCCATCCATGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPGYPRQRCQKI*CLVRACCPSMG Trigger: CCCCATGGATGGACAGCAGGCCCTCACCAAACACCAAATCTTCTGGCACCTTTGTCTTGGATATCCTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | GCTCTGGCTTCCTTTTGGCTCTTTGCTATCAGCTGGTaGCCACTTTTGAGGCTGCCCTCAGTTCCATACCAT | + |
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Preference number: 6 (lower is better) Translates to: ALASFWLFAISW*PLLRLPSVPYH Trigger: ATGGTATGGAACTGAGGGCAGCCTCAAAAGTGGCCACCAGCTGATAGCAAAGAGCCAAAAGGAAGCCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | GGATATCCAAGACAAAGGTGCCAGAAGATTTGGTGTTaGGTGAGGGCCTGCTGTCCATCCATGGGGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GYPRQRCQKIWC*VRACCPSMGSP Trigger: AGGAGACCCCATGGATGGACAGCAGGCCCTCACCAAACACCAAATCTTCTGGCACCTTTGTCTTGGATATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | AGTGCAAGGGACCCCAGGGAAAGGGAACCTGGTGTGTaGGAGAACCAGAAAGAACTGTGGGTCAGAACACAA | + |
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Preference number: 6 (lower is better) Translates to: SARDPREREPGV*ENQKELWVRTQ Trigger: TTGTGTTCTGACCCACAGTTCTTTCTGGTTCTCCAACACACCAGGTTCCCTTTCCCTGGGGTCCCTTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 72 bp | CCTTTTGGCTCTTTGCTATCAGCTGGTGGCCACTTTTaGGGCTGCCCTCAGTTCCATACCATATGGGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: PFGSLLSAGGHF*GCPQFHTIWVF Trigger: GAACACCCATATGGTATGGAACTGAGGGCAGCCTCAAAAGTGGCCACCAGCTGATAGCAAAGAGCCAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | AAGTCCAGGATATCCAAGACAAAGGTGCCAGAAGATTaGGTGTTTGGTGAGGGCCTGCTGTCCATCCATGGG | + |
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Preference number: 6 (lower is better) Translates to: KSRISKTKVPED*VFGEGLLSIHG Trigger: CCCATGGATGGACAGCAGGCCCTCACCAAACACCAAATCTTCTGGCACCTTTGTCTTGGATATCCTGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | CTGCAGGCGTTCCTTTTGCAAGTAGCTGTGAGGCCCTaGGATACTGTGTGTTTTCCAGCCTTTGGGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: LQAFLLQVAVRP*DTVCFPAFGLV Trigger: TACCAACCCAAAGGCTGGAAAACACACAGTATCCAAGGGCCTCACAGCTACTTGCAAAAGGAACGCCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 90 bp | ATCAATTATTCCTGGTGGTGGCTGCAACTTTCTGTGGTGAGGGCCTaGGTATCTAGCAGTGACTACGTTCTCTGCAGGCGTTCCTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: INYSWWWLQLSVVRA*VSSSDYVLCRRSFC Trigger: GCAAAAGGAACGCCTGCAGAGAACGTAGTCACTGCTAGATACCAAGGCCCTCACCACAGAAAGTTGCAGCCACCACCAGGAATAATTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | TCCTTTTGGCTCTTTGCTATCAGCTGGTGGCCACTTTaGAGGCTGCCCTCAGTTCCATACCATATGGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SFWLFAISWWPL*RLPSVPYHMGV Trigger: AACACCCATATGGTATGGAACTGAGGGCAGCCTCAAAAGTGGCCACCAGCTGATAGCAAAGAGCCAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 90 bp | GAAGGCTTCCTGGGAAGTCTAAGCAGAGGATGGTTTGGAGATGCATaGTGCTTACAGACCAAGCAAAGAGGAAGTCATCTGTCCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: EGFLGSLSRGWFGDA*CLQTKQRGSHLSLS Trigger: AGAGAGGGACAGATGACTTCCTCTTTGCTTGGTCTGTAAGCACAATGCATCTCCAAACCATCCTCTGCTTAGACTTCCCAGGAAGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 90 bp | GGATGTTCCTCTCTGGGCCTTTGGGTTGTGAGCCAGGATGTAAATTaGGAGGGAATCAATTATTCCTGGTGGTGGCTGCAACTTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GCSSLGLWVVSQDVN*EGINYSWWWLQLSV Trigger: CACAGAAAGTTGCAGCCACCACCAGGAATAATTGATTCCCTCCAAATTTACATCCTGGCTCACAACCCAAAGGCCCAGAGAGGAACATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | AGCCAGGATGTAAATTTGGAGGGAATCAATTATTCCTaGTGGTGGCTGCAACTTTCTGTGGTGAGGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SQDVNLEGINYS*WWLQLSVVRAL Trigger: CAAGGCCCTCACCACAGAAAGTTGCAGCCACCACCAGGAATAATTGATTCCCTCCAAATTTACATCCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | TCTCTGGGCCTTTGGGTTGTGAGCCAGGATGTAAATTaGGAGGGAATCAATTATTCCTGGTGGTGGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: SLGLWVVSQDVN*EGINYSWWWLQ Trigger: TTGCAGCCACCACCAGGAATAATTGATTCCCTCCAAATTTACATCCTGGCTCACAACCCAAAGGCCCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | ATCACTGAAGGCTTCCTGGGAAGTCTAAGCAGAGGATaGTTTGGAGATGCATTGTGCTTACAGACCAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: ITEGFLGSLSRG*FGDALCLQTKQ Trigger: TTGCTTGGTCTGTAAGCACAATGCATCTCCAAACCATCCTCTGCTTAGACTTCCCAGGAAGCCTTCAGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | CAGGATGTAAATTTGGAGGGAATCAATTATTCCTGGTaGTGGCTGCAACTTTCTGTGGTGAGGGCCTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: QDVNLEGINYSW*WLQLSVVRALV Trigger: TACCAAGGCCCTCACCACAGAAAGTTGCAGCCACCACCAGGAATAATTGATTCCCTCCAAATTTACATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | CTGGGAAGTCTAAGCAGAGGATGGTTTGGAGATGCATaGTGCTTACAGACCAAGCAAAGAGGAAGTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: LGSLSRGWFGDA*CLQTKQRGSHL Trigger: CAGATGACTTCCTCTTTGCTTGGTCTGTAAGCACAATGCATCTCCAAACCATCCTCTGCTTAGACTTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 72 bp | CAGAATGAAGAGCCCTTTCTGTTATCTTCAGGGTCCTaGATGATCTGGACATATGACTACTTCCCACACACA | + |
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Preference number: 6 (lower is better) Translates to: QNEEPFLLSSGS*MIWTYDYFPHT Trigger: TGTGTGTGGGAAGTAGTCATATGTCCAGATCATGCAGGACCCTGAAGATAACAGAAAGGGCTCTTCATTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 72 bp | ACAGACCAAGCAAAGAGGAAGTCATCTGTCCCTCTCTaGCTATCATTTTTGGTATTGCATGAGGTGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: TDQAKRKSSVPL*LSFLVLHEVGF Trigger: AAAGCCCACCTCATGCAATACCAAAAATGATAGGCAGAGAGGGACAGATGACTTCCTCTTTGCTTGGTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 72 bp | AGTTGGATTCTGACCACTAGAAATGCTTTATCTTATTaGAGTCCCATTCAGCACAGAGGGTGTAGGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SWILTTRNALSY*SPIQHRGCRRP Trigger: TGGCCTCCTACACCCTCTGTGCTGAATGGGACTTCAATAAGATAAAGCATTTCTAGTGGTCAGAATCCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | TTAAGGCCCATTTCCCTGCACATAACTCACCTCAGCTaGGTTATACTACTCCAGGGTATGCTAGTAAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: LRPISLHITHLS*VILLQGMLVKG Trigger: TCCTTTTACTAGCATACCCTGGAGTAGTATAACCAAGCTGAGGTGAGTTATGTGCAGGGAAATGGGCCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 90 bp | GGAGACAAAATCTATGTACCTTTCACTCTTCATCACCCCTCACTTTaGCTATTGGATTATCCTTCTCACTTCTTTCCACAGACTGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: GDKIYVPFTLHHPSL*LLDYPSHFFPQTVP Trigger: GGGGACAGTCTGTGGAAAGAAGTGAGAAGGATAATCCAATAGCAAAAGTGAGGGGTGATGAAGAGTGAAAGGTACATAGATTTTGTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 72 bp | TCTGTTATCTTCAGGGTCCTGCATGATCTGGACATATaGCTACTTCCCACACACATTTTCACATGGCCTAAT | + |
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Preference number: 6 (lower is better) Translates to: SVIFRVLHDLDI*LLPTHIFTWPN Trigger: ATTAGGCCATGTGAAAATGTGTGTGGGAAGTAGTCATATGTCCAGATCATGCAGGACCCTGAAGATAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 72 bp | ATGAAGAGCCCTTTCTGTTATCTTCAGGGTCCTGCATaGTCTGGACATATGACTACTTCCCACACACATTTT | + |
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Preference number: 6 (lower is better) Translates to: MKSPFCYLQGPA*SGHMTTSHTHF Trigger: AAAATGTGTGTGGGAAGTAGTCATATGTCCAGATCATGCAGGACCCTGAAGATAACAGAAAGGGCTCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS GCA 72 bp | AGTCATCTGTCCCTCTCTGCCTATCATTTTTGGTATTaGATGAGGTGGGCTTTAGGGGATAATTATCGACAA | + |
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Preference number: 6 (lower is better) Translates to: SHLSLSAYHFWY*MRWALGDNYRQ Trigger: TTGTCGATAATTATCCCCTAAAGCCCACCTCATGCAATACCAAAAATGATAGGCAGAGAGGGACAGATGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | TCATCTGTTCCTCATCCTAAGAACACTGTGAGGCACTaGAAGGTATTCAAGTGGAGCATTGATGTGTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SSVPHPKNTVRH*KVFKWSIDVSD Trigger: ATCAGACACATCAATGCTCCACTTGAATACCTTCAAGTGCCTCACAGTGTTCTTAGGATGAGGAACAGATGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 72 bp | TATAGCTTGGCTAAACCATCGGAGGATGGCAAGATATaGGTCTCCTTTGCCCTAGATAACAAAATGTGCATT | + |
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Preference number: 6 (lower is better) Translates to: YSLAKPSEDGKI*VSFALDNKMCI Trigger: AATGCACATTTTGTTATCTAGGGCAAAGGAGACTCATATCTTGCCATCCTCCGATGGTTTAGCCAAGCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 72 bp | TTTTGGAGTCTGTGGTCACCTGATAGTGCTTGGCTGTaGATTTTAGGAATTACAATTCAGCAACTGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: FWSLWSPDSAWL*ILGITIQQLEG Trigger: ACCTTCCAGTTGCTGAATTGTAATTCCTAAAATTCACAGCCAAGCACTATCAGGTGACCACAGACTCCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CCA 72 bp | TCCCTCTCTGCCTATCATTTTTGGTATTGCATGAGGTaGGCTTTAGGGGATAATTATCGACAATCACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLSAYHFWYCMR*ALGDNYRQSLL Trigger: AAGAAGTGATTGTCGATAATTATCCCCTAAAGCCCACCTCATGCAATACCAAAAATGATAGGCAGAGAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | ATCTATGTACCTTTCACTCTTCATCACCCCTCACTTTaGCTATTGGATTATCCTTCTCACTTCTTTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: IYVPFTLHHPSL*LLDYPSHFFPQ Trigger: CTGTGGAAAGAAGTGAGAAGGATAATCCAATAGCAAAAGTGAGGGGTGATGAAGAGTGAAAGGTACATAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 72 bp | AGCCTGCAGGGTATATTATTATCTCTATTTGGTGGGTaGGAGACTATGTTCTACAGTATATCAGGGAATTTC | + |
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Preference number: 6 (lower is better) Translates to: SLQGILLSLFGG*ETMFYSISGNF Trigger: GAAATTCCCTGATATACTGTAGAACATAGTCTCTCACCCACCAAATAGAGATAATAATATACCCTGCAGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 72 bp | CCATATTCAGCCTGCAGGGTATATTATTATCTCTATTaGGTGGGTGAGAGACTATGTTCTACAGTATATCAG | + |
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Preference number: 6 (lower is better) Translates to: PYSACRVYYYLY*VGERLCSTVYQ Trigger: CTGATATACTGTAGAACATAGTCTCTCACCCACCAAATAGAGATAATAATATACCCTGCAGGCTGAATATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS CAA 90 bp | AATTCGACTCCATATTCAGCCTGCAGGGTATATTATTATCTCTATTaGGTGGGTGAGAGACTATGTTCTACAGTATATCAGGGAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: NSTPYSACRVYYYLY*VGERLCSTVYQGIS Trigger: AGAAATTCCCTGATATACTGTAGAACATAGTCTCTCACCCACCAAATAGAGATAATAATATACCCTGCAGGCTGAATATGGAGTCGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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| CDS TCA 72 bp | AATATCTTCCTGCTTCAGTTATCCAGAGTTGGATTCTaGCCACTAGAAATGCTTTATCTTATTGAAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: NIFLLQLSRVGF*PLEMLYLIEVP Trigger: TGGGACTTCAATAAGATAAAGCATTTCTAGTGGTCAGAATCCAACTCTGGATAACTGAAGCAGGAAGATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619068.1 |
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