RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02226 (Homo sapiens)

Ensembl gene IDs: ENSG00000245729

Ensembl transcript IDs: ENST00000501071.2

Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GGGACTGGCGTTCCAGGAACAGCTGCGCTGGCTGAGCCGGCTCAGTaGGGCGGAGCGGCCAAGCCTTCAGTCCACTCCCACTCCCCGATG +
Preference number: 5 (lower is better)
Translates to: GTGVPGTAALAEPAQ*GGAAKPSVHSHSPM
Trigger: CATCGGGGAGTGGGAGTGGACTGAAGGCTTGGCCGCTCCGCCTCACTGAGCCGGCTCAGCCAGCGCAGCTGTTCCTGGAACGCCAGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 90 bp GCTCTCTCCCATCCTAAGGGACTGGCGTTCCAGGAACAGCTGCGCTaGCTGAGCCGGCTCAGTGAGGCGGAGCGGCCAAGCCTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: ALSHPKGLAFQEQLR*LSRLSEAERPSLQS
Trigger: GGACTGAAGGCTTGGCCGCTCCGCCTCACTGAGCCGGCTCAGCCAGCGCAGCTGTTCCTGGAACGCCAGTCCCTTAGGATGGGAGAGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS TCA 90 bp TCTCCCATCCTAAGGGACTGGCGTTCCAGGAACAGCTGCGCTGGCTaGGCCGGCTCAGTGAGGCGGAGCGGCCAAGCCTTCAGTCCACTC +
Preference number: 5 (lower is better)
Translates to: SPILRDWRSRNSCAG*AGSVRRSGQAFSPL
Trigger: GAGTGGACTGAAGGCTTGGCCGCTCCGCCTCACTGAGCCGGCTCAGCCAGCGCAGCTGTTCCTGGAACGCCAGTCCCTTAGGATGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 90 bp TCAGGCACCCTCTTCCCCAACATTCTGCAGCTGGGAGGGGCCTTGTaGTCCCATCACATGGAGAGTGAAGGGCAGGGTGCCAGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: SGTLFPNILQLGGAL*SHHMESEGQGARLV
Trigger: CACAAGCCTGGCACCCTGCCCTTCACTCTCCATGTGATGGGACCACAAGGCCCCTCCCAGCTGCAGAATGTTGGGGAAGAGGGTGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 90 bp TCCCCAACATTCTGCAGCTGGGAGGGGCCTTGTGGTCCCATCACATaGAGAGTGAAGGGCAGGGTGCCAGGCTTGTGGGAAAGATGTTTC +
Preference number: 5 (lower is better)
Translates to: SPTFCSWEGPCGPIT*RVKGRVPGLWERCF
Trigger: GAAACATCTTTCCCACAAGCCTGGCACCCTGCCCTTCACTCTCCATGTGATGGGACCACAAGGCCCCTCCCAGCTGCAGAATGTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS TCA 90 bp CATTCTGCAGCTGGGAGGGGCCTTGTGGTCCCATCACATGGAGAGTaGAGGGCAGGGTGCCAGGCTTGTGGGAAAGATGTTTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: HSAAGRGLVVPSHGE*RAGCQACGKDVSFS
Trigger: AGAGAAGGAAACATCTTTCCCACAAGCCTGGCACCCTGCCCTTCACTCTCCATGTGATGGGACCACAAGGCCCCTCCCAGCTGCAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS GCA 90 bp TGTAGAAGAGAGGAGCTCTCTCCTTGCCCTTGTATCCCAGCTTCCTaGCTTGGCATGTTGAGATGTGAGAAGCCACTTTGCACCCATGAG +
Preference number: 5 (lower is better)
Translates to: CRREELSPCPCIPAS*LGMLRCEKPLCTHE
Trigger: CTCATGGGTGCAAAGTGGCTTCTCACATCTCAACATGCCAAGGCAGGAAGCTGGGATACAAGGGCAAGGAGAGAGCTCCTCTCTTCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 90 bp AGAAGCAGGAGAGCTGTAGAGATGCTGACCCATGTCCTGACATCATaGGGCTTTGGAGAGCACTTGGAACCACCTTCTCTCTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: RSRRAVEMLTHVLTS*GFGEHLEPPSLSSG
Trigger: ACCTGAAGAGAGAGAAGGTGGTTCCAAGTGCTCTCCAAAGCCCCATGATGTCAGGACATGGGTCAGCATCTCTACAGCTCTCCTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS GCA 90 bp CTGAAGTTGTGGGACGAGGCAGCCCTGCCTGGAGCTTCTGACATATaGAGGCAAATAAACATCCAGTACTTTCTCACAGAGATCTCCGGT +
Preference number: 5 (lower is better)
Translates to: LKLWDEAALPGASDI*RQINIQYFLTEISG
Trigger: ACCGGAGATCTCTGTGAGAAAGTACTGGATGTTTATTTGCCTGCATATGTCAGAAGCTCCAGGCAGGGCTGCCTCGTCCCACAACTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 90 bp AAAGTCCTGTTATTTGACTGTATCACGATAGAAATGGCTACCCATTaGCCATTCCCATCTCTTTCTCCAGTGCCTGCCTCCAGCTACAGA +
Preference number: 5 (lower is better)
Translates to: KVLLFDCITIEMATH*PFPSLSPVPASSYR
Trigger: TCTGTAGCTGGAGGCAGGCACTGGAGAAAGAGATGGGAATGGCCAATGGGTAGCCATTTCTATCGTGATACAGTCAAATAACAGGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS GCA 90 bp GAGAGCACTTGGAACCACCTTCTCTCTCTTCAGGTAAACAGTATATaGTCTTATGGTTTAAGCTGCTGCTCCCTGGGCTTTCTGTTATCA +
Preference number: 5 (lower is better)
Translates to: ESTWNHLLSLQVNSI*SYGLSCCSLGFLLS
Trigger: TGATAACAGAAAGCCCAGGGAGCAGCAGCTTAAACCATAAGAGCATATACTGTTTACCTGAAGAGAGAGAAGGTGGTTCCAAGTGCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS TCA 90 bp TGTTTTCACCTGCCCATGTCTGTCTGGGATGTGGTTCACAGTAAGTaGTGTGTTTCCATTTACAAGTCCAGAATTACAAAGGTTCCATTC +
Preference number: 5 (lower is better)
Translates to: CFHLPMSVWDVVHSK*CVSIYKSRITKVPF
Trigger: GAATGGAACCTTTGTAATTCTGGACTTGTAAATGGAAACACATCACTTACTGTGAACCACATCCCAGACAGACATGGGCAGGTGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 90 bp CATCTGGAAGAATTTGTTTTCACCTGCCCATGTCTGTCTGGGATGTaGTTCACAGTAAGTGATGTGTTTCCATTTACAAGTCCAGAATTA +
Preference number: 5 (lower is better)
Translates to: HLEEFVFTCPCLSGM*FTVSDVFPFTSPEL
Trigger: TAATTCTGGACTTGTAAATGGAAACACATCACTTACTGTGAACCACATCCCAGACAGACATGGGCAGGTGAAAACAAATTCTTCCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 90 bp TTGGAACCACCTTCTCTCTCTTCAGGTAAACAGTATATGCTCTTATaGTTTAAGCTGCTGCTCCCTGGGCTTTCTGTTATCAAAATTAGA +
Preference number: 5 (lower is better)
Translates to: LEPPSLSSGKQYMLL*FKLLLPGLSVIKIR
Trigger: TCTAATTTTGATAACAGAAAGCCCAGGGAGCAGCAGCTTAAACCATAAGAGCATATACTGTTTACCTGAAGAGAGAGAAGGTGGTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS TCA 72 bp GTTCCAGGAACAGCTGCGCTGGCTGAGCCGGCTCAGTaGGGCGGAGCGGCCAAGCCTTCAGTCCACTCCCAC +
Preference number: 6 (lower is better)
Translates to: VPGTAALAEPAQ*GGAAKPSVHSH
Trigger: GTGGGAGTGGACTGAAGGCTTGGCCGCTCCGCCTCACTGAGCCGGCTCAGCCAGCGCAGCTGTTCCTGGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS TCA 72 bp CTAAGGGACTGGCGTTCCAGGAACAGCTGCGCTGGCTaGGCCGGCTCAGTGAGGCGGAGCGGCCAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: LRDWRSRNSCAG*AGSVRRSGQAF
Trigger: GAAGGCTTGGCCGCTCCGCCTCACTGAGCCGGCTCAGCCAGCGCAGCTGTTCCTGGAACGCCAGTCCCTTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 72 bp CATCCTAAGGGACTGGCGTTCCAGGAACAGCTGCGCTaGCTGAGCCGGCTCAGTGAGGCGGAGCGGCCAAGC +
Preference number: 6 (lower is better)
Translates to: HPKGLAFQEQLR*LSRLSEAERPS
Trigger: GCTTGGCCGCTCCGCCTCACTGAGCCGGCTCAGCCAGCGCAGCTGTTCCTGGAACGCCAGTCCCTTAGGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 72 bp TTCTGCAGCTGGGAGGGGCCTTGTGGTCCCATCACATaGAGAGTGAAGGGCAGGGTGCCAGGCTTGTGGGAA +
Preference number: 6 (lower is better)
Translates to: FCSWEGPCGPIT*RVKGRVPGLWE
Trigger: TTCCCACAAGCCTGGCACCCTGCCCTTCACTCTCCATGTGATGGGACCACAAGGCCCCTCCCAGCTGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 72 bp CTCTTCCCCAACATTCTGCAGCTGGGAGGGGCCTTGTaGTCCCATCACATGGAGAGTGAAGGGCAGGGTGCC +
Preference number: 6 (lower is better)
Translates to: LFPNILQLGGAL*SHHMESEGQGA
Trigger: GGCACCCTGCCCTTCACTCTCCATGTGATGGGACCACAAGGCCCCTCCCAGCTGCAGAATGTTGGGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CAA 90 bp GAATCAGGCACCCTCTTCCCCAACATTCTGCAGCTGGGAGGGGCCTaGTGGTCCCATCACATGGAGAGTGAAGGGCAGGGTGCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: ESGTLFPNILQLGGA*WSHHMESEGQGARL
Trigger: AAGCCTGGCACCCTGCCCTTCACTCTCCATGTGATGGGACCACAAGGCCCCTCCCAGCTGCAGAATGTTGGGGAAGAGGGTGCCTGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS TCA 72 bp GCTGGGAGGGGCCTTGTGGTCCCATCACATGGAGAGTaGAGGGCAGGGTGCCAGGCTTGTGGGAAAGATGTT +
Preference number: 6 (lower is better)
Translates to: AGRGLVVPSHGE*RAGCQACGKDV
Trigger: AACATCTTTCCCACAAGCCTGGCACCCTGCCCTTCACTCTCCATGTGATGGGACCACAAGGCCCCTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS TCA 72 bp ATTGTGGCCGCACAGGCTGTGCAAGGCACATGGAAATaGATGGCTCCCCTGAAGTTGTGGGACGAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: IVAAQAVQGTWK*MAPLKLWDEAA
Trigger: GGCTGCCTCGTCCCACAACTTCAGGGGAGCCATTCATTTCCATGTGCCTTGCACAGCCTGTGCGGCCACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 72 bp GAGAATCAGGCACCCTCTTCCCCAACATTCTGCAGCTaGGAGGGGCCTTGTGGTCCCATCACATGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: ENQAPSSPTFCS*EGPCGPITWRV
Trigger: CACTCTCCATGTGATGGGACCACAAGGCCCCTCCCAGCTGCAGAATGTTGGGGAAGAGGGTGCCTGATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS GCA 72 bp GAGGAGCTCTCTCCTTGCCCTTGTATCCCAGCTTCCTaGCTTGGCATGTTGAGATGTGAGAAGCCACTTTGC +
Preference number: 6 (lower is better)
Translates to: EELSPCPCIPAS*LGMLRCEKPLC
Trigger: GCAAAGTGGCTTCTCACATCTCAACATGCCAAGGCAGGAAGCTGGGATACAAGGGCAAGGAGAGAGCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS TCA 72 bp CTTGCCCTTGTATCCCAGCTTCCTGCCTTGGCATGTTaGGATGTGAGAAGCCACTTTGCACCCATGAGAGAG +
Preference number: 6 (lower is better)
Translates to: LALVSQLPALAC*DVRSHFAPMRE
Trigger: CTCTCTCATGGGTGCAAAGTGGCTTCTCACATCTCAACATGCCAAGGCAGGAAGCTGGGATACAAGGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 72 bp AGAGATGCTGACCCATGTCCTGACATCATGGGGCTTTaGAGAGCACTTGGAACCACCTTCTCTCTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: RDADPCPDIMGL*RALGTTFSLFR
Trigger: CCTGAAGAGAGAGAAGGTGGTTCCAAGTGCTCTCCAAAGCCCCATGATGTCAGGACATGGGTCAGCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 72 bp AGAGCTGTAGAGATGCTGACCCATGTCCTGACATCATaGGGCTTTGGAGAGCACTTGGAACCACCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: RAVEMLTHVLTS*GFGEHLEPPSL
Trigger: GAGAGAAGGTGGTTCCAAGTGCTCTCCAAAGCCCCATGATGTCAGGACATGGGTCAGCATCTCTACAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CCA 72 bp CATTTCTCTGTTGCCCAAACTCAGTGCTGCCGATTGTaGCCGCACAGGCTGTGCAAGGCACATGGAAATGAA +
Preference number: 6 (lower is better)
Translates to: HFSVAQTQCCRL*PHRLCKAHGNE
Trigger: TTCATTTCCATGTGCCTTGCACAGCCTGTGCGGCCACAATCGGCAGCACTGAGTTTGGGCAACAGAGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CAA 72 bp CCTTGCCCTTGTATCCCAGCTTCCTGCCTTGGCATGTaGAGATGTGAGAAGCCACTTTGCACCCATGAGAGA +
Preference number: 6 (lower is better)
Translates to: PCPCIPASCLGM*RCEKPLCTHER
Trigger: TCTCTCATGGGTGCAAAGTGGCTTCTCACATCTCAACATGCCAAGGCAGGAAGCTGGGATACAAGGGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CAA 72 bp AACCATTTCTCTGTTGCCCAAACTCAGTGCTGCCGATaGTGGCCGCACAGGCTGTGCAAGGCACATGGAAAT +
Preference number: 6 (lower is better)
Translates to: NHFSVAQTQCCR*WPHRLCKAHGN
Trigger: ATTTCCATGTGCCTTGCACAGCCTGTGCGGCCACAATCGGCAGCACTGAGTTTGGGCAACAGAGAAATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS GCA 72 bp TGGGACGAGGCAGCCCTGCCTGGAGCTTCTGACATATaGAGGCAAATAAACATCCAGTACTTTCTCACAGAG +
Preference number: 6 (lower is better)
Translates to: WDEAALPGASDI*RQINIQYFLTE
Trigger: CTCTGTGAGAAAGTACTGGATGTTTATTTGCCTGCATATGTCAGAAGCTCCAGGCAGGGCTGCCTCGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS TCA 72 bp GAAGTTGTGGGACGAGGCAGCCCTGCCTGGAGCTTCTaGCATATGCAGGCAAATAAACATCCAGTACTTTCT +
Preference number: 6 (lower is better)
Translates to: EVVGRGSPAWSF*HMQANKHPVLS
Trigger: AGAAAGTACTGGATGTTTATTTGCCTGCATATGTCAGAAGCTCCAGGCAGGGCTGCCTCGTCCCACAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CAA 72 bp ACCCATGTCCTGACATCATGGGGCTTTGGAGAGCACTaGGAACCACCTTCTCTCTCTTCAGGTAAACAGTAT +
Preference number: 6 (lower is better)
Translates to: THVLTSWGFGEH*EPPSLSSGKQY
Trigger: ATACTGTTTACCTGAAGAGAGAGAAGGTGGTTCCAAGTGCTCTCCAAAGCCCCATGATGTCAGGACATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS CAA 90 bp GAGATGCTGACCCATGTCCTGACATCATGGGGCTTTGGAGAGCACTaGGAACCACCTTCTCTCTCTTCAGGTAAACAGTATATGCTCTTA +
Preference number: 6 (lower is better)
Translates to: EMLTHVLTSWGFGEH*EPPSLSSGKQYMLL
Trigger: TAAGAGCATATACTGTTTACCTGAAGAGAGAGAAGGTGGTTCCAAGTGCTCTCCAAAGCCCCATGATGTCAGGACATGGGTCAGCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS GCA 72 bp AGGTCCTGTGTGCCTCAATACTGTACTGTAGACAGGTaGTGTCAGGCCATCTGGAAGAATTTGTTTTCACCT +
Preference number: 6 (lower is better)
Translates to: RSCVPQYCTVDR*CQAIWKNLFSP
Trigger: AGGTGAAAACAAATTCTTCCAGATGGCCTGACAGCACCTGTCTACAGTACAGTATTGAGGCACACAGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS TCA 72 bp CTGCCCATGTCTGTCTGGGATGTGGTTCACAGTAAGTaGTGTGTTTCCATTTACAAGTCCAGAATTACAAAG +
Preference number: 6 (lower is better)
Translates to: LPMSVWDVVHSK*CVSIYKSRITK
Trigger: CTTTGTAATTCTGGACTTGTAAATGGAAACACATCACTTACTGTGAACCACATCCCAGACAGACATGGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501071.2
CDS GCA 72 bp CTTCAGGTAAACAGTATATGCTCTTATGGTTTAAGCTaGTGCTCCCTGGGCTTTCTGTTATCAAAATTAGAT +
Preference number: 6 (lower is better)
Translates to: LQVNSICSYGLS*CSLGFLLSKLD
Trigger: ATCTAATTTTGATAACAGAAAGCCCAGGGAGCAGCAGCTTAAACCATAAGAGCATATACTGTTTACCTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501071.2