Pregenerated sensors for LINC02225 (Homo sapiens)
Ensembl gene IDs: ENSG00000249584Ensembl transcript IDs: ENST00000510444.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTGCTGCTCACCTCCTCCTGTGTGGCCTAGTTCCTAACAGGCCATaGACTCATACCAGTCTGCGCCATGGGATTTGGGGACCCCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: PAAHLLLCGLVPNRP*THTSLRHGIWGPLV Trigger: AACAAGGGGTCCCCAAATCCCATGGCGCAGACTGGTATGAGTCCATGGCCTGTTAGGAACTAGGCCACACAGGAGGAGGTGAGCAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS CCA 90 bp | CTAGATCTCTCGCATGTACAGTTCACAGTAAGGCTTGCGCTCCTATaGGAATCTAATGCCACCGCTGATCTGACAGGGGGCGGAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LDLSHVQFTVRLALL*ESNATADLTGGGAQ Trigger: CTGAGCTCCGCCCCCTGTCAGATCAGCGGTGGCATTAGATTCCCATAGGAGCGCAAGCCTTACTGTGAACTGTACATGCGAGAGATCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS TCA 90 bp | GTTCCTCTAATGGGAGCTGTATCCTCTTCTCCACCTGTGGCATCTTaGCCCCTCTCCACTTCAACCAAGGCTGGATTTTCTCTACTCCCT | + |
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Preference number: 5 (lower is better) Translates to: VPLMGAVSSSPPVAS*PLSTSTKAGFSLLP Trigger: AGGGAGTAGAGAAAATCCAGCCTTGGTTGAAGTGGAGAGGGGTCAAGATGCCACAGGTGGAGAAGAGGATACAGCTCCCATTAGAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS GCA 90 bp | CACTCAAGAACTGATGTGCTTTCACGTAGAGGCCATGACCATCTTTaGCTTGGCCTTCACTGGATCCCCTGTCTTCTATTGTATCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: HSRTDVLSRRGHDHL*LGLHWIPCLLLYLC Trigger: GCACAGATACAATAGAAGACAGGGGATCCAGTGAAGGCCAAGGCAAAGATGGTCATGGCCTCTACGTGAAAGCACATCAGTTCTTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS GCA 90 bp | CTTTGCCTTGGCCTTCACTGGATCCCCTGTCTTCTATTGTATCTGTaGCATGAGATGCAATGCTTCTCTGTGCTTATCTTTCCAGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LCLGLHWIPCLLLYL*HEMQCFSVLIFPGF Trigger: AAAGCCTGGAAAGATAAGCACAGAGAAGCATTGCATCTCATGGCACAGATACAATAGAAGACAGGGGATCCAGTGAAGGCCAAGGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS GCA 90 bp | GAATCAGTAATCTCAAAAGCCAGCCTATTCCACACAGTATTGCTCTaGCAAATCCCTGCCTCTTTCCTACCTCACCACTCAAGAACTGAT | + |
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Preference number: 5 (lower is better) Translates to: ESVISKASLFHTVLL*QIPASFLPHHSRTD Trigger: ATCAGTTCTTGAGTGGTGAGGTAGGAAAGAGGCAGGGATTTGGCAGAGCAATACTGTGTGGAATAGGCTGGCTTTTGAGATTACTGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS TCA 90 bp | TCAACTACCAACATGCCTATTTTGAGGAGCTGTGTTCCACTCTCTTaGAGTGCCTTGGATTGTGCCACAAGGATTCCTAGTAAATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: STTNMPILRSCVPLS*SALDCATRIPSKCL Trigger: CAAGCATTTACTAGGAATCCTTGTGGCACAATCCAAGGCACTTCAAGAGAGTGGAACACAGCTCCTCAAAATAGGCATGTTGGTAGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS TCA 90 bp | ATGGTTTCCACTGGCATACATTTTCAACTACCAACATGCCTATTTTaGGGAGCTGTGTTCCACTCTCTTGAAGTGCCTTGGATTGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: MVSTGIHFQLPTCLF*GAVFHSLEVPWIVP Trigger: TGGCACAATCCAAGGCACTTCAAGAGAGTGGAACACAGCTCCTCAAAATAGGCATGTTGGTAGTTGAAAATGTATGCCAGTGGAAACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS TCA 90 bp | GGAAGACAATTTTTCCACGGATGGAGGTTGGGAAAGGTTTCAGGATaGAACTGTTCCACCTCAGATCATCAGGCATTAGTTAGATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: GRQFFHGWRLGKVSG*NCSTSDHQALVRFS Trigger: TGAGAATCTAACTAATGCCTGATGATCTGAGGTGGAACAGTTTCATCCTGAAACCTTTCCCAACCTCCATCCGTGGAAAAATTGTCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS TCA 90 bp | ACTTTAGTAATTTCAACCTCTATTATTCCAGTCAAACATCCCAACTaGAAGAAAGGTAAGGAGATGAATGCCCTCTGGCCCTGGATGATA | + |
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Preference number: 5 (lower is better) Translates to: TLVISTSIIPVKHPN*KKGKEMNALWPWMI Trigger: TATCATCCAGGGCCAGAGGGCATTCATCTCCTTACCTTTCTTTCAGTTGGGATGTTTGACTGGAATAATAGAGGTTGAAATTACTAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS CCA 72 bp | CACCTCCTCCTGTGTGGCCTAGTTCCTAACAGGCCATaGACTCATACCAGTCTGCGCCATGGGATTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: HLLLCGLVPNRP*THTSLRHGIWG Trigger: TCCCCAAATCCCATGGCGCAGACTGGTATGAGTCCATGGCCTGTTAGGAACTAGGCCACACAGGAGGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS CAA 72 bp | CAGGCCATGGACTCATACCAGTCTGCGCCATGGGATTaGGGGACCCCTTGTTTAGAAGATCACCAATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QAMDSYQSAPWD*GTPCLEDHQFQ Trigger: CTGGAATTGGTGATCTTCTAAACAAGGGGTCCCCAAATCCCATGGCGCAGACTGGTATGAGTCCATGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS CAA 90 bp | TGTTCCTCTAATGGGAGCTGTATCCTCTTCTCCACCTGTGGCATCTaGACCCCTCTCCACTTCAACCAAGGCTGGATTTTCTCTACTCCC | + |
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Preference number: 6 (lower is better) Translates to: CSSNGSCILFSTCGI*TPLHFNQGWIFSTP Trigger: GGGAGTAGAGAAAATCCAGCCTTGGTTGAAGTGGAGAGGGGTCAAGATGCCACAGGTGGAGAAGAGGATACAGCTCCCATTAGAGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS TCA 72 bp | ATGGGAGCTGTATCCTCTTCTCCACCTGTGGCATCTTaGCCCCTCTCCACTTCAACCAAGGCTGGATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: MGAVSSSPPVAS*PLSTSTKAGFS Trigger: AGAAAATCCAGCCTTGGTTGAAGTGGAGAGGGGTCAAGATGCCACAGGTGGAGAAGAGGATACAGCTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS GCA 72 bp | CTGCCTCTTTCCTACCTCACCACTCAAGAACTGATGTaGTTTCACGTAGAGGCCATGACCATCTTTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LPLSYLTTQELM*FHVEAMTIFAL Trigger: CAAGGCAAAGATGGTCATGGCCTCTACGTGAAAGCACATCAGTTCTTGAGTGGTGAGGTAGGAAAGAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS CAA 90 bp | CAAGAACTGATGTGCTTTCACGTAGAGGCCATGACCATCTTTGCCTaGGCCTTCACTGGATCCCCTGTCTTCTATTGTATCTGTGCCATG | + |
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Preference number: 6 (lower is better) Translates to: QELMCFHVEAMTIFA*AFTGSPVFYCICAM Trigger: CATGGCACAGATACAATAGAAGACAGGGGATCCAGTGAAGGCCAAGGCAAAGATGGTCATGGCCTCTACGTGAAAGCACATCAGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS GCA 72 bp | ATCTCAAAAGCCAGCCTATTCCACACAGTATTGCTCTaGCAAATCCCTGCCTCTTTCCTACCTCACCACTCA | + |
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Preference number: 6 (lower is better) Translates to: ISKASLFHTVLL*QIPASFLPHHS Trigger: TGAGTGGTGAGGTAGGAAAGAGGCAGGGATTTGGCAGAGCAATACTGTGTGGAATAGGCTGGCTTTTGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS TCA 72 bp | AACATGCCTATTTTGAGGAGCTGTGTTCCACTCTCTTaGAGTGCCTTGGATTGTGCCACAAGGATTCCTAGT | + |
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Preference number: 6 (lower is better) Translates to: NMPILRSCVPLS*SALDCATRIPS Trigger: ACTAGGAATCCTTGTGGCACAATCCAAGGCACTTCAAGAGAGTGGAACACAGCTCCTCAAAATAGGCATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS GCA 72 bp | TTTGTGGCTAGGAATTCCCCAAGTCATGCAGCAGCCTaGTGCTTTCTAATAAGGATAGAAATTTCAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: FVARNSPSHAAA*CFLIRIEISDL Trigger: AAGATCTGAAATTTCTATCCTTATTAGAAAGCAGCAGGCTGCTGCATGACTTGGGGAATTCCTAGCCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS TCA 72 bp | CTCTTCATGTTAGAACTTTTAGCCAGCAAGTCATGTTaGAGCCTGCTATGCTTCTTAATGCACAAACAAAAC | + |
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Preference number: 6 (lower is better) Translates to: LFMLELLASKSC*SLLCFLMHKQN Trigger: GTTTTGTTTGTGCATTAAGAAGCATAGCAGGCTTCAACATGACTTGCTGGCTAAAAGTTCTAACATGAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS CAA 90 bp | CTGTGCTTATCTTTCCAGGCTTTAAAAATCCCTTCTGTGCATAAGTaGGTCATCACTTGTATTAAATTCCTTGGTTTCAAGTTTCAAATG | + |
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Preference number: 6 (lower is better) Translates to: LCLSFQALKIPSVHK*VITCIKFLGFKFQM Trigger: CATTTGAAACTTGAAACCAAGGAATTTAATACAAGTGATGACCAACTTATGCACAGAAGGGATTTTTAAAGCCTGGAAAGATAAGCACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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| CDS CCA 72 bp | CAGTACCTATCTATCTATGATGTAATTGATCATGAATaGTTTCCACTGGCATACATTTTCAACTACCAACAT | + |
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Preference number: 6 (lower is better) Translates to: QYLSIYDVIDHE*FPLAYIFNYQH Trigger: ATGTTGGTAGTTGAAAATGTATGCCAGTGGAAACCATTCATGATCAATTACATCATAGATAGATAGGTACTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510444.1 |
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