Pregenerated sensors for LINC02224 (Homo sapiens)
Ensembl gene IDs: ENSG00000249203Ensembl transcript IDs: ENST00000505706.1, ENST00000510758.1, ENST00000671607.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGTGTCTCCCAATGGCTTCTCAGCCTGTCGCAGGTGTTCTCTGGATaGGTCTGCCTTCATGGTGCCTCTCCTCTCCCAGGAGACTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CVSQWLLSLSQVFSG*VCLHGASPLPGDWR Trigger: TCTCCAGTCTCCTGGGAGAGGAGAGGCACCATGAAGGCAGACCCATCCAGAGAACACCTGCGACAGGCTGAGAAGCCATTGGGAGACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510758.1 |
||
| CDS CCA 90 bp | GAAGTGTGTCTCCCAATGGCTTCTCAGCCTGTCGCAGGTGTTCTCTaGATGGGTCTGCCTTCATGGTGCCTCTCCTCTCCCAGGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: EVCLPMASQPVAGVL*MGLPSWCLSSPRRL Trigger: CAGTCTCCTGGGAGAGGAGAGGCACCATGAAGGCAGACCCATCCAGAGAACACCTGCGACAGGCTGAGAAGCCATTGGGAGACACACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510758.1 |
||
| CDS CCA 90 bp | GGGTCAGGGAACTCTCCCATTTCAGCATGTGTGATTTTCCAGTGGTaGTGTTCAGAAGTGTGTCTCCCAATGGCTTCTCAGCCTGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSGNSPISACVIFQW*CSEVCLPMASQPVA Trigger: TGCGACAGGCTGAGAAGCCATTGGGAGACACACTTCTGAACACCACCACTGGAAAATCACACATGCTGAAATGGGAGAGTTCCCTGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510758.1 |
||
| CDS CCA 90 bp | AGTTTATATTTTGCTTTTCTCAGCCTGTCGCAGGTGTTCTCTGGATaGGTCTGCCTTCATGGTGCCTCTCCTCTCCCAGGAGACTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLYFAFLSLSQVFSG*VCLHGASPLPGDWR Trigger: TCTCCAGTCTCCTGGGAGAGGAGAGGCACCATGAAGGCAGACCCATCCAGAGAACACCTGCGACAGGCTGAGAAAAGCAAAATATAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505706.1 |
||
| CDS CCA 90 bp | GGGTCAGGGAACTCTCCCATTTCAGCATGTGTGATTTTCCAGTGGTaGTGTTCAGAAGTGTGTCTCCCAATGGCTATTCATTATGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSGNSPISACVIFQW*CSEVCLPMAIHYVG Trigger: TCCCACATAATGAATAGCCATTGGGAGACACACTTCTGAACACCACCACTGGAAAATCACACATGCTGAAATGGGAGAGTTCCCTGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671607.1 |
||
| CDS GCA 90 bp | AAGCAGCAGCAAATGTTCAGCTCCAGCAGATTTGTGTTAAGGAAATaGAGGCTCAGTTACAGCAAATCTTTAAGATTTTCCCAGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KQQQMFSSSRFVLRK*RLSYSKSLRFSQRK Trigger: TTTTCTCTGGGAAAATCTTAAAGATTTGCTGTAACTGAGCCTGCATTTCCTTAACACAAATCTGCTGGAGCTGAACATTTGCTGCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510758.1 |
||
| CDS GCA 72 bp | CTTCTCAGCCTGTCGCAGGTGTTCTCTGGATGGGTCTaGCTTCATGGTGCCTCTCCTCTCCCAGGAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSLSQVFSGWV*LHGASPLPGDW Trigger: CCAGTCTCCTGGGAGAGGAGAGGCACCATGAAGGCAGACCCATCCAGAGAACACCTGCGACAGGCTGAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510758.1 |
||
| CDS CCA 72 bp | CTCCCAATGGCTTCTCAGCCTGTCGCAGGTGTTCTCTaGATGGGTCTGCCTTCATGGTGCCTCTCCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPMASQPVAGVL*MGLPSWCLSSP Trigger: GGGAGAGGAGAGGCACCATGAAGGCAGACCCATCCAGAGAACACCTGCGACAGGCTGAGAAGCCATTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510758.1 |
||
| CDS GCA 72 bp | TTTCTCAGCCTGTCGCAGGTGTTCTCTGGATGGGTCTaGCTTCATGGTGCCTCTCCTCTCCCAGGAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLSLSQVFSGWV*LHGASPLPGDW Trigger: CCAGTCTCCTGGGAGAGGAGAGGCACCATGAAGGCAGACCCATCCAGAGAACACCTGCGACAGGCTGAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505706.1 |
||
| CDS CCA 72 bp | CAATGGCTTCTCAGCCTGTCGCAGGTGTTCTCTGGATaGGTCTGCCTTCATGGTGCCTCTCCTCTCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QWLLSLSQVFSG*VCLHGASPLPG Trigger: TCCTGGGAGAGGAGAGGCACCATGAAGGCAGACCCATCCAGAGAACACCTGCGACAGGCTGAGAAGCCATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510758.1 |
||
| CDS CCA 72 bp | TTTGCTTTTCTCAGCCTGTCGCAGGTGTTCTCTGGATaGGTCTGCCTTCATGGTGCCTCTCCTCTCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FAFLSLSQVFSG*VCLHGASPLPG Trigger: TCCTGGGAGAGGAGAGGCACCATGAAGGCAGACCCATCCAGAGAACACCTGCGACAGGCTGAGAAAAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505706.1 |
||
| CDS CCA 72 bp | ATATTTTGCTTTTCTCAGCCTGTCGCAGGTGTTCTCTaGATGGGTCTGCCTTCATGGTGCCTCTCCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IFCFSQPVAGVL*MGLPSWCLSSP Trigger: GGGAGAGGAGAGGCACCATGAAGGCAGACCCATCCAGAGAACACCTGCGACAGGCTGAGAAAAGCAAAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505706.1 |
||
| CDS TCA 72 bp | CATAAGGGGTTTGAGTATGCACTCCAGCTGAACAGATaGGCCACACTCCTGTCACATATCCTGCAAGGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: HKGFEYALQLNR*ATLLSHILQGG Trigger: ACCCCCTTGCAGGATATGTGACAGGAGTGTGGCTCATCTGTTCAGCTGGAGTGCATACTCAAACCCCTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000510758.1 ENST00000671607.1 |
||
| CDS CAA 72 bp | GCTTCCCAGTTCCTGCACCTTCTGTCTGCATACTCCTaGTCTCATAAGGGGTTTGAGTATGCACTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASQFLHLLSAYS*SHKGFEYALQL Trigger: CAGCTGGAGTGCATACTCAAACCCCTTATGAGACAAGGAGTATGCAGACAGAAGGTGCAGGAACTGGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000510758.1 ENST00000671607.1 |
||
| CDS TCA 72 bp | CCTTGTCTCATAAGGGGTTTGAGTATGCACTCCAGCTaGACAGATGAGCCACACTCCTGTCACATATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PCLIRGLSMHSS*TDEPHSCHISC Trigger: GCAGGATATGTGACAGGAGTGTGGCTCATCTGTTCAGCTGGAGTGCATACTCAAACCCCTTATGAGACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000510758.1 ENST00000671607.1 |
||
| CDS CAA 90 bp | TGGGAAAAGGTCATTACAAAGGTCTTCATCCTCATTATATTCACGTaGAGTAGGCTGAGAGGAGGAAGGGCAAAGTCTGGTCTTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: WEKVITKVFILIIFT*SRLRGGRAKSGLAV Trigger: GACAGCAAGACCAGACTTTGCCCTTCCTCCTCTCAGCCTACTCAACGTGAATATAATGAGGATGAAGACCTTTGTAATGACCTTTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671607.1 |
||
| CDS CAA 72 bp | GTCATTACAAAGGTCTTCATCCTCATTATATTCACGTaGAGTAGGCTGAGAGGAGGAAGGGCAAAGTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VITKVFILIIFT*SRLRGGRAKSG Trigger: ACCAGACTTTGCCCTTCCTCCTCTCAGCCTACTCAACGTGAATATAATGAGGATGAAGACCTTTGTAATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671607.1 |
||
| CDS CCA 72 bp | TTTTCCAGTGGTGGTGTTCAGAAGTGTGTCTCCCAATaGCTATTCATTATGTGGGAAAAGGTCATTACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FSSGGVQKCVSQ*LFIMWEKVITK Trigger: CTTTGTAATGACCTTTTCCCACATAATGAATAGCCATTGGGAGACACACTTCTGAACACCACCACTGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671607.1 |
||
| CDS CAA 72 bp | TTCTTTGTGATGCTAGGTGGCACTACTAGTCAAGACTaGGTATTTCATAGCTGGCTTTCTTATTCTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FFVMLGGTTSQD*VFHSWLSYSEG Trigger: ACCTTCAGAATAAGAAAGCCAGCTATGAAATACCAAGTCTTGACTAGTAGTGCCACCTAGCATCACAAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671607.1 |
||
| CDS CAA 90 bp | AACAACTTTTTCTTTGTGATGCTAGGTGGCACTACTAGTCAAGACTaGGTATTTCATAGCTGGCTTTCTTATTCTGAAGGTTGTAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NNFFFVMLGGTTSQD*VFHSWLSYSEGCKK Trigger: CTTTTTACAACCTTCAGAATAAGAAAGCCAGCTATGAAATACCAAGTCTTGACTAGTAGTGCCACCTAGCATCACAAAGAAAAAGTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000671607.1 |
||