Pregenerated sensors for LINC02221 (Homo sapiens)
Ensembl gene IDs: ENSG00000250814Ensembl transcript IDs: ENST00000508097.1, ENST00000650908.1, ENST00000654793.1, ENST00000661300.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTCATGGCTATTCTGGTTTCAGGTCTGAGACCACGGAGTCCTTGTTaGCTCTCTTGCTTCGTCAGCCTGGGTTGGATCCCCACCCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VMAILVSGLRPRSPC*LSCFVSLGWIPTPA Trigger: AGCTGGGGTGGGGATCCAACCCAGGCTGACGAAGCAAGAGAGCCAACAAGGACTCCGTGGTCTCAGACCTGAAACCAGAATAGCCATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS CCA 90 bp | CTTACACTCTGCTGCCAGAAAGCCACTCACGCTCCCCACCAAGCCTaGTCTTTCTCCCAGCTTGCATATCATCACAAATGTCATGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: LTLCCQKATHAPHQA*SFSQLAYHHKCHGY Trigger: ATAGCCATGACATTTGTGATGATATGCAAGCTGGGAGAAAGACCAGGCTTGGTGGGGAGCGTGAGTGGCTTTCTGGCAGCAGAGTGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654793.1 |
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| CDS TCA 90 bp | GCTTGCATATCATCACAAATGTCATGGCTATTCTGGTTTCAGGTCTaGGACCACGGAGTCCTTGTTGGCTCTCTTGCTTCGTCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ACISSQMSWLFWFQV*DHGVLVGSLASSAW Trigger: CCAGGCTGACGAAGCAAGAGAGCCAACAAGGACTCCGTGGTCTCAGACCTGAAACCAGAATAGCCATGACATTTGTGATGATATGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS GCA 90 bp | AGTCTTGCTGATTTCAAATACTCTTTTATGTCCCTTACACTCTGCTaGCAGAAAGCCACTCACGCTCCCCACCAAGCCTGGTCTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SLADFKYSFMSLTLC*QKATHAPHQAWSFS Trigger: GGAGAAAGACCAGGCTTGGTGGGGAGCGTGAGTGGCTTTCTGGCAGCAGAGTGTAAGGGACATAAAAGAGTATTTGAAATCAGCAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654793.1 |
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| CDS CCA 90 bp | GGAACAACCAAATCGATTGATTCATTTGGGGACCGGACCACAGGCTaGGAACCACCTTCTAATGATGTAATCACCAACTGGACTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: GTTKSIDSFGDRTTG*EPPSNDVITNWTPL Trigger: CAATGGAGTCCAGTTGGTGATTACATCATTAGAAGGTGGTTCCCAGCCTGTGGTCCGGTCCCCAAATGAATCAATCGATTTGGTTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650908.1 |
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| CDS CCA 90 bp | CGGACCACAGGCTGGGAACCACCTTCTAATGATGTAATCACCAACTaGACTCCATTGGGACATCTCAACTTTGTTGCTCAAATAGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: RTTGWEPPSNDVITN*TPLGHLNFVAQIEV Trigger: AACCTCTATTTGAGCAACAAAGTTGAGATGTCCCAATGGAGTCCAGTTGGTGATTACATCATTAGAAGGTGGTTCCCAGCCTGTGGTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650908.1 |
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| CDS CCA 90 bp | CTTTGTAGTTATACTGATGTAACTGAGACTTTGACCCATTTGCTCTaGGTCTCAGGGGCTGTCTTCCAAACAGTGAGGATCCTGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LCSYTDVTETLTHLL*VSGAVFQTVRILLL Trigger: CAACAACAGGATCCTCACTGTTTGGAAGACAGCCCCTGAGACCCAGAGCAAATGGGTCAAAGTCTCAGTTACATCAGTATAACTACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000650908.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS GCA 90 bp | CTCTTTAACGTCCTGCTTAATAGAAGATGGCTGCCTGCTTACATCTaGTTCTGTATTCAGTCTGTTGTGATTTGCTGTTTTCCAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: LFNVLLNRRWLPAYI*FCIQSVVICCFPDV Trigger: CACATCTGGAAAACAGCAAATCACAACAGACTGAATACAGAAGCAGATGTAAGCAGGCAGCCATCTTCTATTAAGCAGGACGTTAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661300.1 |
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| CDS GCA 90 bp | AGACTGTTATGGAAATATTGTGTTAGGGAATATTACGTGTTGAATTaGATCCCTCCAGATTTACATGTTGGGGTCTTAACTCCCAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: RLLWKYCVREYYVLN*IPPDLHVGVLTPRS Trigger: GCTTCTGGGAGTTAAGACCCCAACATGTAAATCTGGAGGGATGCAATTCAACACGTAATATTCCCTAACACAATATTTCCATAACAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508097.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS GCA 72 bp | TCAGGTCTGAGACCACGGAGTCCTTGTTGGCTCTCTTaGTTCGTCAGCCTGGGTTGGATCCCCACCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SGLRPRSPCWLS*FVSLGWIPTPA Trigger: AGCTGGGGTGGGGATCCAACCCAGGCTGACGAAGCAAGAGAGCCAACAAGGACTCCGTGGTCTCAGACCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS CAA 90 bp | TGTCATGGCTATTCTGGTTTCAGGTCTGAGACCACGGAGTCCTTGTaGGCTCTCTTGCTTCGTCAGCCTGGGTTGGATCCCCACCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CHGYSGFRSETTESL*ALLLRQPGLDPHPS Trigger: GCTGGGGTGGGGATCCAACCCAGGCTGACGAAGCAAGAGAGCCAACAAGGACTCCGTGGTCTCAGACCTGAAACCAGAATAGCCATGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS CCA 72 bp | TCTCACATGAGGGGCCTTTGGCAGCCTCCTGATGTCTaGTTACATCACTGTTGCCCCAGCACAATCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SHMRGLWQPPDV*LHHCCPSTICS Trigger: GGAGCAGATTGTGCTGGGGCAACAGTGATGTAACCAGACATCAGGAGGCTGCCAAAGGCCCCTCATGTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS CCA 72 bp | ATTCTGGTTTCAGGTCTGAGACCACGGAGTCCTTGTTaGCTCTCTTGCTTCGTCAGCCTGGGTTGGATCCCC | + |
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Preference number: 6 (lower is better) Translates to: ILVSGLRPRSPC*LSCFVSLGWIP Trigger: GGGGATCCAACCCAGGCTGACGAAGCAAGAGAGCCAACAAGGACTCCGTGGTCTCAGACCTGAAACCAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS CAA 72 bp | GGCCATGGGCACCTACCGAGGTCTCCAGACTATACTTaGAGGATGGTTGTGGTAGCAGAAGGAAGCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GHGHLPRSPDYT*RMVVVAEGSPR Trigger: TCTGGGGCTTCCTTCTGCTACCACAACCATCCTCAAAGTATAGTCTGGAGACCTCGGTAGGTGCCCATGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654793.1 |
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| CDS CAA 90 bp | AAATGTCATGGCTATTCTGGTTTCAGGTCTGAGACCACGGAGTCCTaGTTGGCTCTCTTGCTTCGTCAGCCTGGGTTGGATCCCCACCCC | + |
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Preference number: 6 (lower is better) Translates to: KCHGYSGFRSETTES*LALLLRQPGLDPHP Trigger: GGGGTGGGGATCCAACCCAGGCTGACGAAGCAAGAGAGCCAACAAGGACTCCGTGGTCTCAGACCTGAAACCAGAATAGCCATGACATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS TCA 72 bp | CATGACCTCTCACATGAGGGGCCTTTGGCAGCCTCCTaGTGTCTGGTTACATCACTGTTGCCCCAGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: HDLSHEGPLAAS*CLVTSLLPQHN Trigger: ATTGTGCTGGGGCAACAGTGATGTAACCAGACATCAGGAGGCTGCCAAAGGCCCCTCATGTGAGAGGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS CAA 72 bp | TATTCTGGTTTCAGGTCTGAGACCACGGAGTCCTTGTaGGCTCTCTTGCTTCGTCAGCCTGGGTTGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: YSGFRSETTESL*ALLLRQPGLDP Trigger: GGGATCCAACCCAGGCTGACGAAGCAAGAGAGCCAACAAGGACTCCGTGGTCTCAGACCTGAAACCAGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS TCA 72 bp | GACTTGGTATCCACTTCTTTCAGACTCTGCCCCTTCTaGCCCAGTCCTGTGAGGCTCCATGACCTCTCACAT | + |
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Preference number: 6 (lower is better) Translates to: DLVSTSFRLCPF*PSPVRLHDLSH Trigger: ATGTGAGAGGTCATGGAGCCTCACAGGACTGGGTCAGAAGGGGCAGAGTCTGAAAGAAGTGGATACCAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS GCA 72 bp | GATTTCAAATACTCTTTTATGTCCCTTACACTCTGCTaGCAGAAAGCCACTCACGCTCCCCACCAAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: DFKYSFMSLTLC*QKATHAPHQAW Trigger: CCAGGCTTGGTGGGGAGCGTGAGTGGCTTTCTGGCAGCAGAGTGTAAGGGACATAAAAGAGTATTTGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654793.1 |
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| CDS GCA 72 bp | GCTGATTTCAAATACTCTTTTATGTCCCTTACACTCTaGTGCCAGAAAGCCACTCACGCTCCCCACCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ADFKYSFMSLTL*CQKATHAPHQA Trigger: GGCTTGGTGGGGAGCGTGAGTGGCTTTCTGGCAGCAGAGTGTAAGGGACATAAAAGAGTATTTGAAATCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654793.1 |
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| CDS TCA 72 bp | TCATCACAAATGTCATGGCTATTCTGGTTTCAGGTCTaGGACCACGGAGTCCTTGTTGGCTCTCTTGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: SSQMSWLFWFQV*DHGVLVGSLAS Trigger: CGAAGCAAGAGAGCCAACAAGGACTCCGTGGTCTCAGACCTGAAACCAGAATAGCCATGACATTTGTGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508097.1 ENST00000654793.1 |
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| CDS CAA 72 bp | TGCTCAAATAGAGGTTCGAGGTCTCCAGACTATACTTaGAGGATGGTTGTGGTAGCAGAAGGAAGCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: CSNRGSRSPDYT*RMVVVAEGSPR Trigger: TCTGGGGCTTCCTTCTGCTACCACAACCATCCTCAAAGTATAGTCTGGAGACCTCGAACCTCTATTTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650908.1 |
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| CDS CAA 90 bp | GGCTGGGAACCACCTTCTAATGATGTAATCACCAACTGGACTCCATaGGGACATCTCAACTTTGTTGCTCAAATAGAGGTTCGAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GWEPPSNDVITNWTP*GHLNFVAQIEVRGL Trigger: GAGACCTCGAACCTCTATTTGAGCAACAAAGTTGAGATGTCCCAATGGAGTCCAGTTGGTGATTACATCATTAGAAGGTGGTTCCCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650908.1 |
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| CDS CCA 72 bp | TATACTGATGTAACTGAGACTTTGACCCATTTGCTCTaGGTCTCAGGGGCTGTCTTCCAAACAGTGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: YTDVTETLTHLL*VSGAVFQTVRI Trigger: GATCCTCACTGTTTGGAAGACAGCCCCTGAGACCCAGAGCAAATGGGTCAAAGTCTCAGTTACATCAGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000650908.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS CCA 72 bp | AAATCGATTGATTCATTTGGGGACCGGACCACAGGCTaGGAACCACCTTCTAATGATGTAATCACCAACTGG | + |
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Preference number: 6 (lower is better) Translates to: KSIDSFGDRTTG*EPPSNDVITNW Trigger: CCAGTTGGTGATTACATCATTAGAAGGTGGTTCCCAGCCTGTGGTCCGGTCCCCAAATGAATCAATCGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650908.1 |
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| CDS GCA 72 bp | CACCAACTGGACTCCATTGGGACATCTCAACTTTGTTaGTCAAATAGAGGTTCGAGGTCTCCAGACTATACT | + |
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Preference number: 6 (lower is better) Translates to: HQLDSIGTSQLC*SNRGSRSPDYT Trigger: AGTATAGTCTGGAGACCTCGAACCTCTATTTGAGCAACAAAGTTGAGATGTCCCAATGGAGTCCAGTTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650908.1 |
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| CDS CCA 72 bp | GGCTGGGAACCACCTTCTAATGATGTAATCACCAACTaGACTCCATTGGGACATCTCAACTTTGTTGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: GWEPPSNDVITN*TPLGHLNFVAQ Trigger: TTGAGCAACAAAGTTGAGATGTCCCAATGGAGTCCAGTTGGTGATTACATCATTAGAAGGTGGTTCCCAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650908.1 |
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| CDS CAA 72 bp | TGTAGTTATACTGATGTAACTGAGACTTTGACCCATTaGCTCTGGGTCTCAGGGGCTGTCTTCCAAACAGTG | + |
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Preference number: 6 (lower is better) Translates to: CSYTDVTETLTH*LWVSGAVFQTV Trigger: CACTGTTTGGAAGACAGCCCCTGAGACCCAGAGCAAATGGGTCAAAGTCTCAGTTACATCAGTATAACTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000650908.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS CAA 90 bp | TATTGTCTTTGTAGTTATACTGATGTAACTGAGACTTTGACCCATTaGCTCTGGGTCTCAGGGGCTGTCTTCCAAACAGTGAGGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: YCLCSYTDVTETLTH*LWVSGAVFQTVRIL Trigger: CAGGATCCTCACTGTTTGGAAGACAGCCCCTGAGACCCAGAGCAAATGGGTCAAAGTCTCAGTTACATCAGTATAACTACAAAGACAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000650908.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS GCA 72 bp | CATAGCTCTTTAACGTCCTGCTTAATAGAAGATGGCTaGCTGCTTACATCTGCTTCTGTATTCAGTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: HSSLTSCLIEDG*LLTSASVFSLL Trigger: CAACAGACTGAATACAGAAGCAGATGTAAGCAGGCAGCCATCTTCTATTAAGCAGGACGTTAAAGAGCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661300.1 |
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| CDS CCA 72 bp | CCACATAATGACTTCATGTTATTAGGTTTGAATTTGTaGACCCTTAAAAAGGCCATGGGCACCTACCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: PHNDFMLLGLNL*TLKKAMGTYRG Trigger: ACCTCGGTAGGTGCCCATGGCCTTTTTAAGGGTCCACAAATTCAAACCTAATAACATGAAGTCATTATGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654793.1 |
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| CDS CAA 72 bp | TATTGTCTTTGTAGTTATACTGATGTAACTGAGACTTaGACCCATTTGCTCTGGGTCTCAGGGGCTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YCLCSYTDVTET*THLLWVSGAVF Trigger: GAAGACAGCCCCTGAGACCCAGAGCAAATGGGTCAAAGTCTCAGTTACATCAGTATAACTACAAAGACAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000650908.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS CAA 90 bp | GGTAAGAATTATTGTCTTTGTAGTTATACTGATGTAACTGAGACTTaGACCCATTTGCTCTGGGTCTCAGGGGCTGTCTTCCAAACAGTG | + |
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Preference number: 6 (lower is better) Translates to: GKNYCLCSYTDVTET*THLLWVSGAVFQTV Trigger: CACTGTTTGGAAGACAGCCCCTGAGACCCAGAGCAAATGGGTCAAAGTCTCAGTTACATCAGTATAACTACAAAGACAATAATTCTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000650908.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS GCA 72 bp | GTCCTGCTTAATAGAAGATGGCTGCCTGCTTACATCTaGTTCTGTATTCAGTCTGTTGTGATTTGCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLLNRRWLPAYI*FCIQSVVICCF Trigger: AAAACAGCAAATCACAACAGACTGAATACAGAAGCAGATGTAAGCAGGCAGCCATCTTCTATTAAGCAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661300.1 |
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| CDS CAA 72 bp | AAGCCACATAATGACTTCATGTTATTAGGTTTGAATTaGTGGACCCTTAAAAAGGCCATGGGCACCTACCGA | + |
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Preference number: 6 (lower is better) Translates to: KPHNDFMLLGLN*WTLKKAMGTYR Trigger: TCGGTAGGTGCCCATGGCCTTTTTAAGGGTCCACAAATTCAAACCTAATAACATGAAGTCATTATGTGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654793.1 |
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| CDS CAA 72 bp | CCACCTTCTAATGATGTAATCACCAACTGGACTCCATaGGGACATCTCAACTTTGTTGCTCAAATAGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: PPSNDVITNWTP*GHLNFVAQIEV Trigger: AACCTCTATTTGAGCAACAAAGTTGAGATGTCCCAATGGAGTCCAGTTGGTGATTACATCATTAGAAGGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650908.1 |
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| CDS CAA 90 bp | CGCTACAGACTGTTATGGAAATATTGTGTTAGGGAATATTACGTGTaGAATTGCATCCCTCCAGATTTACATGTTGGGGTCTTAACTCCC | + |
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Preference number: 6 (lower is better) Translates to: RYRLLWKYCVREYYV*NCIPPDLHVGVLTP Trigger: GGGAGTTAAGACCCCAACATGTAAATCTGGAGGGATGCAATTCAACACGTAATATTCCCTAACACAATATTTCCATAACAGTCTGTAGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508097.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS CAA 90 bp | AGGGGCTGTCTTCCAAACAGTGAGGATCCTGTTGTTGAAGCATGTTaGTTGACGATAGCTGGAGTAATATATTCAATTCTTCAACAACCT | + |
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Preference number: 6 (lower is better) Translates to: RGCLPNSEDPVVEAC*LTIAGVIYSILQQP Trigger: AGGTTGTTGAAGAATTGAATATATTACTCCAGCTATCGTCAACAAACATGCTTCAACAACAGGATCCTCACTGTTTGGAAGACAGCCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000650908.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS CAA 72 bp | CTGTTATGGAAATATTGTGTTAGGGAATATTACGTGTaGAATTGCATCCCTCCAGATTTACATGTTGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LLWKYCVREYYV*NCIPPDLHVGV Trigger: GACCCCAACATGTAAATCTGGAGGGATGCAATTCAACACGTAATATTCCCTAACACAATATTTCCATAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508097.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS TCA 72 bp | TGTTATGGAAATATTGTGTTAGGGAATATTACGTGTTaGATTGCATCCCTCCAGATTTACATGTTGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: CYGNIVLGNITC*IASLQIYMLGS Trigger: AGACCCCAACATGTAAATCTGGAGGGATGCAATTCAACACGTAATATTCCCTAACACAATATTTCCATAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508097.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS GCA 72 bp | TGGAAATATTGTGTTAGGGAATATTACGTGTTGAATTaGATCCCTCCAGATTTACATGTTGGGGTCTTAACT | + |
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Preference number: 6 (lower is better) Translates to: WKYCVREYYVLN*IPPDLHVGVLT Trigger: AGTTAAGACCCCAACATGTAAATCTGGAGGGATGCAATTCAACACGTAATATTCCCTAACACAATATTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508097.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS CAA 72 bp | CCAAACAGTGAGGATCCTGTTGTTGAAGCATGTTTGTaGACGATAGCTGGAGTAATATATTCAATTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PNSEDPVVEACL*TIAGVIYSILQ Trigger: TTGAAGAATTGAATATATTACTCCAGCTATCGTCAACAAACATGCTTCAACAACAGGATCCTCACTGTTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000650908.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS CAA 72 bp | CTTCCAAACAGTGAGGATCCTGTTGTTGAAGCATGTTaGTTGACGATAGCTGGAGTAATATATTCAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPNSEDPVVEAC*LTIAGVIYSIL Trigger: AAGAATTGAATATATTACTCCAGCTATCGTCAACAAACATGCTTCAACAACAGGATCCTCACTGTTTGGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000650908.1 ENST00000654793.1 ENST00000661300.1 |
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| CDS CCA 72 bp | TTGATTATCATTTCATCTCACATTGTGCCTTGTTTTTaGAATCCGGTGTTAAAGTTGACACGTGGTTATAAG | + |
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Preference number: 6 (lower is better) Translates to: LIIISSHIVPCF*NPVLKLTRGYK Trigger: CTTATAACCACGTGTCAACTTTAACACCGGATTCCAAAAACAAGGCACAATGTGAGATGAAATGATAATCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000650908.1 ENST00000654793.1 ENST00000661300.1 |
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