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Pregenerated sensors for LINC02213 (Homo sapiens)

Ensembl gene IDs: ENSG00000249160

Ensembl transcript IDs: ENST00000504650.2, ENST00000506021.4

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GTCTCTCCATCCCTGGGAACCCAGGGCTGGCCTGTGGCTCCCTTGTaGCTGATAGGATGGAGTAGAATCGATGCCGATGATGTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: VSPSLGTQGWPVAPL*LIGWSRIDADDVPG
Trigger: GCCTGGGACATCATCGGCATCGATTCTACTCCATCCTATCAGTCACAAGGGAGCCACAGGCCAGCCCTGGGTTCCCAGGGATGGAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504650.2
CDS TCA 90 bp CTTTCATGGTTCTGTTTGCAAGGAGGCAGCAGGGCTGTGCTTTCTTaGAGGGCTCTAGGGGAGCATCTATCTGTTCCACGGCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LSWFCLQGGSRAVLS*RALGEHLSVPRLSL
Trigger: AAGAGAAAGCCGTGGAACAGATAGATGCTCCCCTAGAGCCCTTCAAGAAAGCACAGCCCTGCTGCCTCCTTGCAAACAGAACCATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506021.4
CDS CCA 90 bp AGAGTTGTAGAAGAGAAACGCACCCAGATCGCTGGAGCAGGGATGTaGCGGACATTGACTCTTTTGTCTGCTGAGGGTAATAGTCAACCT +
Preference number: 5 (lower is better)
Translates to: RVVEEKRTQIAGAGM*RTLTLLSAEGNSQP
Trigger: AGGTTGACTATTACCCTCAGCAGACAAAAGAGTCAATGTCCGCCACATCCCTGCTCCAGCGATCTGGGTGCGTTTCTCTTCTACAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506021.4
CDS CCA 72 bp TCATTCCCGCATGCAGAAGCAGAGTCTCTCCATCCCTaGGAACCCAGGGCTGGCCTGTGGCTCCCTTGTGAC +
Preference number: 6 (lower is better)
Translates to: SFPHAEAESLHP*EPRAGLWLPCD
Trigger: GTCACAAGGGAGCCACAGGCCAGCCCTGGGTTCCCAGGGATGGAGAGACTCTGCTTCTGCATGCGGGAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504650.2
CDS TCA 72 bp TCCCTGGGAACCCAGGGCTGGCCTGTGGCTCCCTTGTaGCTGATAGGATGGAGTAGAATCGATGCCGATGAT +
Preference number: 6 (lower is better)
Translates to: SLGTQGWPVAPL*LIGWSRIDADD
Trigger: ATCATCGGCATCGATTCTACTCCATCCTATCAGTCACAAGGGAGCCACAGGCCAGCCCTGGGTTCCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504650.2
CDS TCA 72 bp TTCTGTTTGCAAGGAGGCAGCAGGGCTGTGCTTTCTTaGAGGGCTCTAGGGGAGCATCTATCTGTTCCACGG +
Preference number: 6 (lower is better)
Translates to: FCLQGGSRAVLS*RALGEHLSVPR
Trigger: CCGTGGAACAGATAGATGCTCCCCTAGAGCCCTTCAAGAAAGCACAGCCCTGCTGCCTCCTTGCAAACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506021.4
CDS CAA 72 bp CGCACCCAGATCGCTGGAGCAGGGATGTGGCGGACATaGACTCTTTTGTCTGCTGAGGGTAATAGTCAACCT +
Preference number: 6 (lower is better)
Translates to: RTQIAGAGMWRT*TLLSAEGNSQP
Trigger: AGGTTGACTATTACCCTCAGCAGACAAAAGAGTCAATGTCCGCCACATCCCTGCTCCAGCGATCTGGGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506021.4
CDS CAA 72 bp GTTCTGTTTGCAAGGAGGCAGCAGGGCTGTGCTTTCTaGAAGGGCTCTAGGGGAGCATCTATCTGTTCCACG +
Preference number: 6 (lower is better)
Translates to: VLFARRQQGCAF*KGSRGASICST
Trigger: CGTGGAACAGATAGATGCTCCCCTAGAGCCCTTCAAGAAAGCACAGCCCTGCTGCCTCCTTGCAAACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506021.4
CDS CAA 90 bp TCTTTCATGGTTCTGTTTGCAAGGAGGCAGCAGGGCTGTGCTTTCTaGAAGGGCTCTAGGGGAGCATCTATCTGTTCCACGGCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SFMVLFARRQQGCAF*KGSRGASICSTAFS
Trigger: AGAGAAAGCCGTGGAACAGATAGATGCTCCCCTAGAGCCCTTCAAGAAAGCACAGCCCTGCTGCCTCCTTGCAAACAGAACCATGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506021.4
CDS TCA 72 bp AGTTGTAGAAGAGAAACGCACTTTAGGACATCAAGGTaGACCATAATTGGGACACAGAAGTTTCTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: SCRRETHFRTSR*TIIGTQKFLEE
Trigger: CTCTTCCAGAAACTTCTGTGTCCCAATTATGGTTCACCTTGATGTCCTAAAGTGCGTTTCTCTTCTACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504650.2
CDS TCA 72 bp ACAATCCATCCTTTATCCATGGGTTTATTTCAAGACTaGTTATTCTGCTCCAGTAATGTATTGGTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: TIHPLSMGLFQD*LFCSSNVLVSS
Trigger: AGAACTGACCAATACATTACTGGAGCAGAATAATCAGTCTTGAAATAAACCCATGGATAAAGGATGGATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506021.4