Pregenerated sensors for LINC02211 (Homo sapiens)
Ensembl gene IDs: ENSG00000245662Ensembl transcript IDs: ENST00000502100.2, ENST00000641091.1, ENST00000642022.1, ENST00000642024.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACCACTGGTGCTTCCCAGAGTCCAAAGGCCGAAGAACCTGGAGTCTaGTGTCCAAGGTCAAGAGAAGCAGAAGCAAACATCAGGCACAGA | + |
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Preference number: 5 (lower is better) Translates to: TTGASQSPKAEEPGV*CPRSREAEANIRHR Trigger: TCTGTGCCTGATGTTTGCTTCTGCTTCTCTTGACCTTGGACATCAGACTCCAGGTTCTTCGGCCTTTGGACTCTGGGAAGCACCAGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS CCA 90 bp | CAGAATAACCAAGCAGGTCATCCTCTTCAATGCACTCATCAGAGGTaGCTAAGGAGGATGACAATTCTCCCTGAGTTTGGAGGATCACTC | + |
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Preference number: 5 (lower is better) Translates to: QNNQAGHPLQCTHQR*LRRMTILPEFGGSL Trigger: GAGTGATCCTCCAAACTCAGGGAGAATTGTCATCCTCCTTAGCCACCTCTGATGAGTGCATTGAAGAGGATGACCTGCTTGGTTATTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642024.1 |
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| CDS GCA 90 bp | TTTGTATTCGGGAAGCAGAATAACCAAGCAGGTCATCCTCTTCAATaGACTCATCAGAGGTGGCTAAGGAGGATGACAATTCTCCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: FVFGKQNNQAGHPLQ*THQRWLRRMTILPE Trigger: CTCAGGGAGAATTGTCATCCTCCTTAGCCACCTCTGATGAGTGCATTGAAGAGGATGACCTGCTTGGTTATTCTGCTTCCCGAATACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642024.1 |
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| CDS CCA 90 bp | TGGGTCTTCCTCTCCCAGTCCACCAATTCAAATGTCAGTCTCCTTTaGCAACATCCTCATAAACACACCCAGAAACAATGCATTACCAGC | + |
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Preference number: 5 (lower is better) Translates to: WVFLSQSTNSNVSLL*QHPHKHTQKQCITS Trigger: GCTGGTAATGCATTGTTTCTGGGTGTGTTTATGAGGATGTTGCCAAAGGAGACTGACATTTGAATTGGTGGACTGGGAGAGGAAGACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS GCA 90 bp | GTCAGTCTCCTTTGGCAACATCCTCATAAACACACCCAGAAACAATaGATTACCAGCCTTCTGGATCTTCCAGAAGAAAATGGTCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: VSLLWQHPHKHTQKQ*ITSLLDLPEENGLV Trigger: GACCAGACCATTTTCTTCTGGAAGATCCAGAAGGCTGGTAATGCATTGTTTCTGGGTGTGTTTATGAGGATGTTGCCAAAGGAGACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS GCA 90 bp | TTTGTATTCGGGAAGCAGAATAACCAAGCAGGTCATCCTCTTCAATaGACTCATCAGAGGTGGCTAAGGAGGATGACTATTATAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FVFGKQNNQAGHPLQ*THQRWLRRMTIIMV Trigger: GACCATTATAATAGTCATCCTCCTTAGCCACCTCTGATGAGTGCATTGAAGAGGATGACCTGCTTGGTTATTCTGCTTCCCGAATACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502100.2 ENST00000641091.1 |
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| CDS CCA 72 bp | CTCCACCTGCTTGTTCTAGCAGGGCTGGCAGATGATTaGATGCTGTCCACCCACATTGAAGTTGGGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LHLLVLAGLADD*MLSTHIEVGSS Trigger: GGAAGACCCAACTTCAATGTGGGTGGACAGCATCCAATCATCTGCCAGCCCTGCTAGAACAAGCAGGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS CCA 72 bp | CACTGGTGCTTCCCAGAGTCCAAAGGCCGAAGAACCTaGAGTCTGATGTCCAAGGTCAAGAGAAGCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: HWCFPESKGRRT*SLMSKVKRSRS Trigger: GCTTCTGCTTCTCTTGACCTTGGACATCAGACTCCAGGTTCTTCGGCCTTTGGACTCTGGGAAGCACCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS CAA 72 bp | CAGGGCTGGCAGATGATTGGATGCTGTCCACCCACATaGAAGTTGGGTCTTCCTCTCCCAGTCCACCAATTC | + |
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Preference number: 6 (lower is better) Translates to: QGWQMIGCCPPT*KLGLPLPVHQF Trigger: GAATTGGTGGACTGGGAGAGGAAGACCCAACTTCAATGTGGGTGGACAGCATCCAATCATCTGCCAGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS TCA 72 bp | GCTTCCCAGAGTCCAAAGGCCGAAGAACCTGGAGTCTaGTGTCCAAGGTCAAGAGAAGCAGAAGCAAACATC | + |
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Preference number: 6 (lower is better) Translates to: ASQSPKAEEPGV*CPRSREAEANI Trigger: GATGTTTGCTTCTGCTTCTCTTGACCTTGGACATCAGACTCCAGGTTCTTCGGCCTTTGGACTCTGGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS CCA 72 bp | ATGCATTACCAGCCTTCTGGATCTTCCAGAAGAAAATaGTCTGGTCTTAGTTCCGGTCCGGCAGAGATCGCG | + |
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Preference number: 6 (lower is better) Translates to: MHYQPSGSSRRK*SGLSSGPAEIA Trigger: CGCGATCTCTGCCGGACCGGAACTAAGACCAGACCATTTTCTTCTGGAAGATCCAGAAGGCTGGTAATGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS TCA 72 bp | AAGAAAGAGACAGCCAGAAGACTTAGTGAAGCAAAGTaGTCCCACCTCTCTCCACCTGCTTGTTCTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KKETARRLSEAK*SHLSPPACSSR Trigger: CCTGCTAGAACAAGCAGGTGGAGAGAGGTGGGATCACTTTGCTTCACTAAGTCTTCTGGCTGTCTCTTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS CCA 72 bp | CAAGCAGGTCATCCTCTTCAATGCACTCATCAGAGGTaGCTAAGGAGGATGACAATTCTCCCTGAGTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QAGHPLQCTHQR*LRRMTILPEFG Trigger: TCCAAACTCAGGGAGAATTGTCATCCTCCTTAGCCACCTCTGATGAGTGCATTGAAGAGGATGACCTGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642024.1 |
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| CDS CAA 72 bp | TGGCAGATGATTGGATGCTGTCCACCCACATTGAAGTaGGGTCTTCCTCTCCCAGTCCACCAATTCAAATGT | + |
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Preference number: 6 (lower is better) Translates to: WQMIGCCPPTLK*GLPLPVHQFKC Trigger: ACATTTGAATTGGTGGACTGGGAGAGGAAGACCCAACTTCAATGTGGGTGGACAGCATCCAATCATCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS GCA 72 bp | GGGAAGCAGAATAACCAAGCAGGTCATCCTCTTCAATaGACTCATCAGAGGTGGCTAAGGAGGATGACTATT | + |
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Preference number: 6 (lower is better) Translates to: GKQNNQAGHPLQ*THQRWLRRMTI Trigger: AATAGTCATCCTCCTTAGCCACCTCTGATGAGTGCATTGAAGAGGATGACCTGCTTGGTTATTCTGCTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502100.2 ENST00000641091.1 |
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| CDS GCA 72 bp | GGGAAGCAGAATAACCAAGCAGGTCATCCTCTTCAATaGACTCATCAGAGGTGGCTAAGGAGGATGACAATT | + |
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Preference number: 6 (lower is better) Translates to: GKQNNQAGHPLQ*THQRWLRRMTI Trigger: AATTGTCATCCTCCTTAGCCACCTCTGATGAGTGCATTGAAGAGGATGACCTGCTTGGTTATTCTGCTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642024.1 |
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| CDS CCA 72 bp | CAAGCAGGTCATCCTCTTCAATGCACTCATCAGAGGTaGCTAAGGAGGATGACTATTATAATGGTCAAAATC | + |
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Preference number: 6 (lower is better) Translates to: QAGHPLQCTHQR*LRRMTIIMVKI Trigger: GATTTTGACCATTATAATAGTCATCCTCCTTAGCCACCTCTGATGAGTGCATTGAAGAGGATGACCTGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502100.2 ENST00000641091.1 |
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| CDS GCA 72 bp | CTTTGGCAACATCCTCATAAACACACCCAGAAACAATaGATTACCAGCCTTCTGGATCTTCCAGAAGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LWQHPHKHTQKQ*ITSLLDLPEEN Trigger: ATTTTCTTCTGGAAGATCCAGAAGGCTGGTAATGCATTGTTTCTGGGTGTGTTTATGAGGATGTTGCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642022.1 |
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| CDS TCA 72 bp | GAGGATGACTATTATAATGGTCAAAATCTAGGACACTaGCGGCATCAAATGCTGACAATGATGTTGAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: EDDYYNGQNLGH*RHQMLTMMLRN Trigger: ATTTCTCAACATCATTGTCAGCATTTGATGCCGTCAGTGTCCTAGATTTTGACCATTATAATAGTCATCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502100.2 ENST00000641091.1 |
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| CDS GCA 72 bp | TGCCATCGTTTTCATGTTTATTATTGTCGCTTACGCTaGAAGTGTGATGCATGTAGAAAGAAAAACATAATA | + |
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Preference number: 6 (lower is better) Translates to: CHRFHVYYCRLR*KCDACRKKNII Trigger: TATTATGTTTTTCTTTCTACATGCATCACACTTGCAGCGTAAGCGACAATAATAAACATGAAAACGATGGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642024.1 |
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