RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02210 (Homo sapiens)

Ensembl gene IDs: ENSG00000204650

Ensembl transcript IDs: ENST00000444561.2, ENST00000455565.5, ENST00000578000.5, ENST00000580220.2, ENST00000580655.1, ENST00000582491.5, ENST00000583740.5, ENST00000585118.5, ENST00000585122.5, ENST00000589868.1, ENST00000591271.5, ENST00000631721.1, ENST00000632092.1, ENST00000632544.1, ENST00000632929.1, ENST00000633111.1, ENST00000633237.1, ENST00000633571.1, ENST00000633823.1, ENST00000633924.1, ENST00000633957.1, ENST00000634069.1

Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TACTCCCTGGCGATTTGCTCAGTGCAGGCTCTGGGCCTCTGGCCTTaGCACTGGCTTCCTGGAGACAATCCTGCACTCCCTGGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: YSLAICSVQALGLWP*HWLPGDNPALPGRC
Trigger: GCAGCGGCCAGGGAGTGCAGGATTGTCTCCAGGAAGCCAGTGCCAAGGCCAGAGGCCCAGAGCCTGCACTGAGCAAATCGCCAGGGAGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp GGGGACCCACCCCTCCTGCAGCCTCGGAAGGCTGAACTCCTCCGGTaGCCAGTTTGTCCTGACCTCAGAAGTACAACCCACTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: GDPPLLQPRKAELLR*PVCPDLRSTTHSTW
Trigger: CCAAGTGGAGTGGGTTGTACTTCTGAGGTCAGGACAAACTGGGCACCGGAGGAGTTCAGCCTTCCGAGGCTGCAGGAGGGGTGGGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS GCA 90 bp CAAGGCCTTACATCATCTTGCTCGCCTCAGGGGACCCACCCCTCCTaGAGCCTCGGAAGGCTGAACTCCTCCGGTGCCCAGTTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: QGLTSSCSPQGTHPS*SLGRLNSSGAQFVL
Trigger: CAGGACAAACTGGGCACCGGAGGAGTTCAGCCTTCCGAGGCTGCAGGAGGGGTGGGTCCCCTGAGGCGAGCAAGATGATGTAAGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 90 bp AGGGACTCCCGTGATCCTGGAGCACTGCAGGCTCCCAGAGCTTCCTaGGGACTGAGGCTTGGGGACATGTGGGACGCTCAGATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RDSRDPGALQAPRAS*GLRLGDMWDAQMEK
Trigger: CTTCTCCATCTGAGCGTCCCACATGTCCCCAAGCCTCAGTCCCCAGGAAGCTCTGGGAGCCTGCAGTGCTCCAGGATCACGGGAGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp GAGGTACCAAGAAGCCTTCCTCTGCAGAGCCCACCGTCTCTTCCCTaGCACGTCCTTCCCTCCCTAACTCTCCTTGTCGTCTCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: EVPRSLPLQSPPSLP*HVLPSLTLLVVSSP
Trigger: CGGGGAGGAGACGACAAGGAGAGTTAGGGAGGGAAGGACGTGCCAGGGAAGAGACGGTGGGCTCTGCAGAGGAAGGCTTCTTGGTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp AGGATTGCAACAGCTGAACTCAGTCCCCGCTCCAACTCGCCTCCATaGAGCCCGCTCTGGCCTTCGAGCACCAGCAAGCCCTCTGGACTT +
Preference number: 5 (lower is better)
Translates to: RIATAELSPRSNSPP*SPLWPSSTSKPSGL
Trigger: AAGTCCAGAGGGCTTGCTGGTGCTCGAAGGCCAGAGCGGGCTTCATGGAGGCGAGTTGGAGCGGGGACTGAGTTCAGCTGTTGCAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS GCA 90 bp CTGTCAGCCAGCAGACCCATTCACTCCCAGCCAGAATCTCACCTCTaGTGCCCCCATCTTGTCTTGGGAAGGAGGATCTCCATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LSASRPIHSQPESHL*CPHLVLGRRISIPL
Trigger: CAGCGGGATGGAGATCCTCCTTCCCAAGACAAGATGGGGGCAGCAGAGGTGAGATTCTGGCTGGGAGTGAATGGGTCTGCTGGCTGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp CAAAGACTAACAGGACTCCAGACGCCAGACCAGGATTGCAACAGCTaGACTCAGTCCCCGCTCCAACTCGCCTCCATGAAGCCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: QRLTGLQTPDQDCNS*TQSPLQLASMKPAL
Trigger: CAGAGCGGGCTTCATGGAGGCGAGTTGGAGCGGGGACTGAGTTCAGCTGTTGCAATCCTGGTCTGGCGTCTGGAGTCCTGTTAGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS TCA 90 bp GCTGAGGTGGGAGGACCACCTGAGCTCGGAAAGTCAAGCCTGCAGTaGGCCGAGATGGCACCAATGCACTGGTGCATTAGACAATGCCTG +
Preference number: 5 (lower is better)
Translates to: AEVGGPPELGKSSLQ*AEMAPMHWCIRQCL
Trigger: CAGGCATTGTCTAATGCACCAGTGCATTGGTGCCATCTCGGCTCACTGCAGGCTTGACTTTCCGAGCTCAGGTGGTCCTCCCACCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS TCA 90 bp CCTGGCCGCTGCAGTGTGCTGGCTGGAAGATTGCTGATGAGAAGGTaGTGGTCTCCAGGAGGACTTATTTGGCCTCCGGTGCCAACTGTG +
Preference number: 5 (lower is better)
Translates to: PGRCSVLAGRLLMRR*WSPGGLIWPPVPTV
Trigger: CACAGTTGGCACCGGAGGCCAAATAAGTCCTCCTGGAGACCATCACCTTCTCATCAGCAATCTTCCAGCCAGCACACTGCAGCGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp TTGTTGCAGAAACAGCCGGCCAGATGGTCAGCTCGCTTTGCCAGGTaGCCAGATCCCTGCCAGCACGGCTGTCTGAAAATGTCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: LLQKQPARWSARFAR*PDPCQHGCLKMSAE
Trigger: CTCTGCTGACATTTTCAGACAGCCGTGCTGGCAGGGATCTGGGCACCTGGCAAAGCGAGCTGACCATCTGGCCGGCTGTTTCTGCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp ATTAGCAGGGCAGAGGGGCACTGTCCACGGATAAGCTTTCGAATGTaGCAGCCAAGCTGTCAGCCAGCAGACCCATTCACTCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ISRAEGHCPRISFRM*QPSCQPADPFTPSQ
Trigger: CTGGCTGGGAGTGAATGGGTCTGCTGGCTGACAGCTTGGCTGTCACATTCGAAAGCTTATCCGTGGACAGTGCCCCTCTGCCCTGCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp GCAAAGGCAGCAATGTCTGGTTCTGCACAATCCAGGGGAGACCTGTaGGTGACATCCCTGTCATTAGCAGGGCAGAGGGGCACTGTCCAC +
Preference number: 5 (lower is better)
Translates to: AKAAMSGSAQSRGDL*VTSLSLAGQRGTVH
Trigger: GTGGACAGTGCCCCTCTGCCCTGCTAATGACAGGGATGTCACTCACAGGTCTCCCCTGGATTGTGCAGAACCAGACATTGCTGCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp TCAGCCAGCAGACCCATTCACTCCCAGCCAGAATCTCACCTCTGCTaGCCCCATCTTGTCTTGGGAAGGAGGATCTCCATCCCGCTGAAT +
Preference number: 5 (lower is better)
Translates to: SASRPIHSQPESHLC*PHLVLGRRISIPLN
Trigger: ATTCAGCGGGATGGAGATCCTCCTTCCCAAGACAAGATGGGGGCAGCAGAGGTGAGATTCTGGCTGGGAGTGAATGGGTCTGCTGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp TCTCTTTTTGTTGCAGAAACAGCCGGCCAGATGGTCAGCTCGCTTTaGCAGGTGCCCAGATCCCTGCCAGCACGGCTGTCTGAAAATGTC +
Preference number: 5 (lower is better)
Translates to: SLFVAETAGQMVSSL*QVPRSLPARLSENV
Trigger: GACATTTTCAGACAGCCGTGCTGGCAGGGATCTGGGCACCTGGCAAAGCGAGCTGACCATCTGGCCGGCTGTTTCTGCAACAAAAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp CTGGGTTCTCACTGGGAAGCCCCGTCTCACTTTCCTCCAAGTGGGTaGAGTTCAGGTTTCGTGAGTGCCTTCAGTTGGGAACAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: LGSHWEAPSHFPPSG*SSGFVSAFSWEQEA
Trigger: AGCCTCTTGTTCCCAACTGAAGGCACTCACGAAACCTGAACTGCACCCACTTGGAGGAAAGTGAGACGGGGCTTCCCAGTGAGAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp GTGTCCAGCCATTACCACAGGCACAGAGATGGATTCCTCTACACTTaGGAAACCCCAAGGCTGACCCCAGCCAGGGATGCATGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: VSSHYHRHRDGFLYT*ETPRLTPARDACGL
Trigger: TAACCCACATGCATCCCTGGCTGGGGTCAGCCTTGGGGTTTCCCAAGTGTAGAGGAATCCATCTCTGTGCCTGTGGTAATGGCTGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS CCA 90 bp TCCTGGAGACAATCCTGCACTCCCTGGCCGCTGCAGTGTGCTGGCTaGAAGATTGCTGATGAGAAGGTGATGGTCTCCAGGAGGACTTAT +
Preference number: 5 (lower is better)
Translates to: SWRQSCTPWPLQCAG*KIADEKVMVSRRTY
Trigger: ATAAGTCCTCCTGGAGACCATCACCTTCTCATCAGCAATCTTCCAGCCAGCACACTGCAGCGGCCAGGGAGTGCAGGATTGTCTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp CTCCCTGGGTTCTCACTGGGAAGCCCCGTCTCACTTTCCTCCAAGTaGGTGCAGTTCAGGTTTCGTGAGTGCCTTCAGTTGGGAACAAGA +
Preference number: 5 (lower is better)
Translates to: LPGFSLGSPVSLSSK*VQFRFRECLQLGTR
Trigger: TCTTGTTCCCAACTGAAGGCACTCACGAAACCTGAACTGCACCCACTTGGAGGAAAGTGAGACGGGGCTTCCCAGTGAGAACCCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp CAAAGGAGCCCAGCTCCCAAAACCTTTGACACCATCTCTTTTTGTTaGAGAAACAGCCGGCCAGATGGTCAGCTCGCTTTGCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: QRSPAPKTFDTISFC*RNSRPDGQLALPGA
Trigger: GGCACCTGGCAAAGCGAGCTGACCATCTGGCCGGCTGTTTCTGCAACAAAAAGAGATGGTGTCAAAGGTTTTGGGAGCTGGGCTCCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp TTAGCCCTCTGCAGGTCGAGGAAGCAGAGGAGGGAGCCACTCCTGTaGACTCAATTCTCACCCTCGCTGGTGAAAACAGAAATGATGGGT +
Preference number: 5 (lower is better)
Translates to: LALCRSRKQRREPLL*TQFSPSLVKTEMMG
Trigger: ACCCATCATTTCTGTTTTCACCAGCGAGGGTGAGAATTGAGTCCACAGGAGTGGCTCCCTCCTCTGCTTCCTCGACCTGCAGAGGGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 90 bp GGTGATGGTCTCCAGGAGGACTTATTTGGCCTCCGGTGCCAACTGTaGGTCAAAGGAGCCCAGCTCCCAAAACCTTTGACACCATCTCTT +
Preference number: 5 (lower is better)
Translates to: GDGLQEDLFGLRCQL*VKGAQLPKPLTPSL
Trigger: AAGAGATGGTGTCAAAGGTTTTGGGAGCTGGGCTCCTTTGACCCACAGTTGGCACCGGAGGCCAAATAAGTCCTCCTGGAGACCATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp GCTGGGAAGTCTGAAATTAGGGGACAGCATTTAGTGAGGGCCTTTTaGCTGCATTGTAACAGGTGGAGGATGGCCGGGCACAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: AGKSEIRGQHLVRAF*LHCNRWRMAGHSGS
Trigger: TGAGCCACTGTGCCCGGCCATCCTCCACCTGTTACAATGCAGCCAAAAGGCCCTCACTAAATGCTGTCCCCTAATTTCAGACTTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp CCGAGGGCCCTGACCTGCCTGATTATCTCCAACACTACATCTAACTaGTGGGGACCTGTGGCTATCACCTGTGCAGCTAGACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: PRALTCLIISNTTSN*WGPVAITCAARPED
Trigger: ATCTTCTGGTCTAGCTGCACAGGTGATAGCCACAGGTCCCCACCAGTTAGATGTAGTGTTGGAGATAATCAGGCAGGTCAGGGCCCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp TCCGGTGCCAACTGTGGGTCAAAGGAGCCCAGCTCCCAAAACCTTTaGCACCATCTCTTTTTGTTGCAGAAACAGCCGGCCAGATGGTCA +
Preference number: 5 (lower is better)
Translates to: SGANCGSKEPSSQNL*HHLFLLQKQPARWS
Trigger: TGACCATCTGGCCGGCTGTTTCTGCAACAAAAAGAGATGGTGTCAAAGGTTTTGGGAGCTGGGCTCCTTTGACCCACAGTTGGCACCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp CTCTTCCTCTGCCTTGATGGTACCTGCACAGACTCAGGGGCATCTTaGGTCAGATGTGCTTCTCCCTGGGTGGGTGATAATCTCAGTCCT +
Preference number: 5 (lower is better)
Translates to: LFLCLDGTCTDSGAS*VRCASPWVGDNLSP
Trigger: AGGACTGAGATTATCACCCACCCAGGGAGAAGCACATCTGACTCAAGATGCCCCTGAGTCTGTGCAGGTACCATCAAGGCAGAGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp GCTTCCCATCTGGTTTTCTGTGCCCATCCTACTCTTCCTCTGCCTTaGTGGTACCTGCACAGACTCAGGGGCATCTTGAGTCAGATGTGC +
Preference number: 5 (lower is better)
Translates to: ASHLVFCAHPTLPLP*WYLHRLRGILSQMC
Trigger: GCACATCTGACTCAAGATGCCCCTGAGTCTGTGCAGGTACCATCAAGGCAGAGGAAGAGTAGGATGGGCACAGAAAACCAGATGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp CCCGTCTCACTTTCCTCCAAGTGGGTGCAGTTCAGGTTTCGTGAGTaGCTTCAGTTGGGAACAAGAGGCTCCGCTACCCCTAAACTCAAA +
Preference number: 5 (lower is better)
Translates to: PVSLSSKWVQFRFRE*LQLGTRGSATPKLK
Trigger: TTTGAGTTTAGGGGTAGCGGAGCCTCTTGTTCCCAACTGAAGGCACTCACGAAACCTGAACTGCACCCACTTGGAGGAAAGTGAGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp GCACAGACTCAGGGGCATCTTGAGTCAGATGTGCTTCTCCCTGGGTaGGTGATAATCTCAGTCCTGCCACAGAGGCAAGTAATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: AQTQGHLESDVLLPG*VIISVLPQRQVMKW
Trigger: CCACTTCATTACTTGCCTCTGTGGCAGGACTGAGATTATCACCCACCCAGGGAGAAGCACATCTGACTCAAGATGCCCCTGAGTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp TCCACTCCCAGCACACACGTACACGTGCACACAGCAGAGGCTAGCTaGTGTGGCCACAAGGCACAAAGAATAGATCCTTCTGATCAGTTC +
Preference number: 5 (lower is better)
Translates to: STPSTHVHVHTAEAS*CGHKAQRIDPSDQF
Trigger: GAACTGATCAGAAGGATCTATTCTTTGTGCCTTGTGGCCACATCAGCTAGCCTCTGCTGTGTGCACGTGTACGTGTGTGCTGGGAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS GCA 90 bp ATGGCTGCCTCAGAAGGCACTCCTGTCACTGGAGATACTTGTTTGTaGACAACTTCAGCCACAATTCATGGGGACCCTGCAGAAGAGACC +
Preference number: 5 (lower is better)
Translates to: MAASEGTPVTGDTCL*TTSATIHGDPAEET
Trigger: GGTCTCTTCTGCAGGGTCCCCATGAATTGTGGCTGAAGTTGTGCACAAACAAGTATCTCCAGTGACAGGAGTGCCTTCTGAGGCAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000455565.5
ENST00000580220.2
ENST00000582491.5
ENST00000583740.5
ENST00000585118.5
ENST00000585122.5
ENST00000591271.5
ENST00000631721.1
ENST00000632092.1
ENST00000632544.1
ENST00000632929.1
ENST00000633571.1
ENST00000633823.1
ENST00000633924.1
CDS GCA 90 bp CTGAGCTCGGAAAGTCAAGCCTGCAGTGAGCCGAGATGGCACCAATaGACTGGTGCATTAGACAATGCCTGGACAATGAACCTTGTCTCA +
Preference number: 5 (lower is better)
Translates to: LSSESQACSEPRWHQ*TGALDNAWTMNLVS
Trigger: TGAGACAAGGTTCATTGTCCAGGCATTGTCTAATGCACCAGTGCATTGGTGCCATCTCGGCTCACTGCAGGCTTGACTTTCCGAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS GCA 90 bp AATGACAATCCATTCCTCAGCACGCATTTGCGGAGTGCCACTATGTaGTCGGTCCTGCAGAGAAAGCTGAGACTTGGCTGTTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: NDNPFLSTHLRSATM*SVLQRKLRLGCSWP
Trigger: AGGCCAAGAACAGCCAAGTCTCAGCTTTCTCTGCAGGACCGAGCACATAGTGGCACTCCGCAAATGCGTGCTGAGGAATGGATTGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp ATTGCTTGTTTGTTTGTTCCCTCTGTAGCCTTTGACGCATCTCCCTaGGTTCTCACTGGGAAGCCCCGTCTCACTTTCCTCCAAGTGGGT +
Preference number: 5 (lower is better)
Translates to: IACLFVPSVAFDASP*VLTGKPRLTFLQVG
Trigger: ACCCACTTGGAGGAAAGTGAGACGGGGCTTCCCAGTGAGAACCCAGGGAGATGCGTCAAAGGCTACAGAGGGAACAAACAAACAAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp AGGGCCCTGACCTGCCTGATTATCTCCAACACTACATCTAACTGGTaGGGACCTGTGGCTATCACCTGTGCAGCTAGACCAGAAGATAGA +
Preference number: 5 (lower is better)
Translates to: RALTCLIISNTTSNW*GPVAITCAARPEDR
Trigger: TCTATCTTCTGGTCTAGCTGCACAGGTGATAGCCACAGGTCCCCACCAGTTAGATGTAGTGTTGGAGATAATCAGGCAGGTCAGGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp CAATTCTCACCCTCGCTGGTGAAAACAGAAATGATGGGTTCACATTaGTCACAGCTCCCCCTGGAACGACTTCCTTCTCTCCACTTCCAG +
Preference number: 5 (lower is better)
Translates to: QFSPSLVKTEMMGSH*SQLPLERLPSLHFQ
Trigger: CTGGAAGTGGAGAGAAGGAAGTCGTTCCAGGGGGAGCTGTGAGCAATGTGAACCCATCATTTCTGTTTTCACCAGCGAGGGTGAGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS GCA 90 bp CAAGGCCTGGTCATCTGGCAAGGTGAAGAGGGCCTCAGAAACCACTaGTGGCGTGTGCTTTTCTGCTGGTTAAACATTCCAAGAGAAAAG +
Preference number: 5 (lower is better)
Translates to: QGLVIWQGEEGLRNH*WRVLFCWLNIPREK
Trigger: CTTTTCTCTTGGAATGTTTAACCAGCAGAAAAGCACACGCCAGCAGTGGTTTCTGAGGCCCTCTTCACCTTGCCAGATGACCAGGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp GTGGAGGGATGGTTCCATGTTCATCTCTTCTTCACTCTCTCTCTTTaGGTCATCATCTCTGTGTCGTACTCTCCTTCCTTCCCATCTGCC +
Preference number: 5 (lower is better)
Translates to: VEGWFHVHLFFTLSL*VIISVSYSPSFPSA
Trigger: GGCAGATGGGAAGGAAGGAGAGTACGACACAGAGATGATGACGCAAAGAGAGAGAGTGAAGAAGAGATGAACATGGAACCATCCCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp GTCATAAACCATAAAGCAAATTTGGGGCATCCGAGGGCCCTGACCTaGCTGATTATCTCCAACACTACATCTAACTGGTGGGGACCTGTG +
Preference number: 5 (lower is better)
Translates to: VINHKANLGHPRALT*LIISNTTSNWWGPV
Trigger: CACAGGTCCCCACCAGTTAGATGTAGTGTTGGAGATAATCAGGCAGGTCAGGGCCCTCGGATGCCCCAAATTTGCTTTATGGTTTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp GCAGCAGCACCACCTAGTGGCAATGTGCAGCAGCATGCTAATTACTaGCCAAATGCAGGAGCTTGTCTAATAGCTACTACATCAGGACAC +
Preference number: 5 (lower is better)
Translates to: AAAPPSGNVQQHANY*PNAGACLIATTSGH
Trigger: GTGTCCTGATGTAGTAGCTATTAGACAAGCTCCTGCATTTGGCCAGTAATTAGCATGCTGCTGCACATTGCCACTAGGTGGTGCTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS CCA 90 bp CTTTTCAGTGCCTGTCTCAGCAGCAAGCACTTGTCAGCCAGATCTTaGAGGCCAAAGCCTGTCTACCCTAACACAAAGAAGACACTCAAG +
Preference number: 5 (lower is better)
Translates to: LFSACLSSKHLSARS*RPKPVYPNTKKTLK
Trigger: CTTGAGTGTCTTCTTTGTGTTAGGGTAGACAGGCTTTGGCCTCCAAGATCTGGCTGACAAGTGCTTGCTGCTGAGACAGGCACTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 90 bp GGCCTGGTCATCTGGCAAGGTGAAGAGGGCCTCAGAAACCACTGCTaGCGTGTGCTTTTCTGCTGGTTAAACATTCCAAGAGAAAAGAAA +
Preference number: 5 (lower is better)
Translates to: GLVIWQGEEGLRNHC*RVLFCWLNIPREKK
Trigger: TTTCTTTTCTCTTGGAATGTTTAACCAGCAGAAAAGCACACGCCAGCAGTGGTTTCTGAGGCCCTCTTCACCTTGCCAGATGACCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp GAAGCTGGACGCCATGGGCCAGGCTTTCTTTTATTAAAACCGAGATaGTACTCTTCCTCTTCTCAAAGTGCCTACAGAACAGCTGAGACC +
Preference number: 5 (lower is better)
Translates to: EAGRHGPGFLLLKPR*YSSSSQSAYRTAET
Trigger: GGTCTCAGCTGTTCTGTAGGCACTTTGAGAAGAGGAAGAGTAGCATCTCGGTTTTAATAAAAGAAAGCCTGGCCCATGGCGTCCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS CCA 90 bp TCACATCCTTCCGTGGTTAAATGTTGGCTTCTCTCTTCCCATCTGTaGCTGTCTGTTACCCCAAGTCAAGGCCTTACATCATCTTGCTCG +
Preference number: 5 (lower is better)
Translates to: SHPSVVKCWLLSSHL*LSVTPSQGLTSSCS
Trigger: CGAGCAAGATGATGTAAGGCCTTGACTTGGGGTAACAGACAGCCACAGATGGGAAGAGAGAAGCCAACATTTAACCACGGAAGGATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS TCA 90 bp CTGGATCCACCTATAGTGCCAAACACGCCCACATCTAGTCTGGCTTaGCTAGACTTGGACATGTTTAATCAAGCTGCCCTGATTTACTGC +
Preference number: 5 (lower is better)
Translates to: LDPPIVPNTPTSSLA*LDLDMFNQAALIYC
Trigger: GCAGTAAATCAGGGCAGCTTGATTAAACATGTCCAAGTCTAGTCAAGCCAGACTAGATGTGGGCGTGTTTGGCACTATAGGTGGATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp CCTCCTACCCCAATGTCTGCTCCTGATCTAATAGTCAGCACTATTTaGATATCCCCATGTGCCAGGCACTATACCAAGCCTATTGCAAGC +
Preference number: 5 (lower is better)
Translates to: PPTPMSAPDLIVSTI*ISPCARHYTKPIAS
Trigger: GCTTGCAATAGGCTTGGTATAGTGCCTGGCACATGGGGATATTCAAATAGTGCTGACTATTAGATCAGGAGCAGACATTGGGGTAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 90 bp GTTTCTGTAGCGGAGGGAATGGAGGCCGAGCTTGTCCGTTATCTCTaGCGCGTTCATAGTATTAGGGAGATCTTGTTTATTGGCAAATAC +
Preference number: 5 (lower is better)
Translates to: VSVAEGMEAELVRYL*RVHSIREILFIGKY
Trigger: GTATTTGCCAATAAACAAGATCTCCCTAATACTATGAACGCGGCAGAGATAACGGACAAGCTCGGCCTCCATTCCCTCCGCTACAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444561.2
ENST00000633957.1
CDS CCA 90 bp CGGTGCCCAGTTTGTCCTGACCTCAGAAGTACAACCCACTCCACTTaGAGGAAGCAAAGAGGGTTTTTAAAGAAATACAAGCAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: RCPVCPDLRSTTHST*RKQRGFLKKYKQLH
Trigger: GTGAAGCTGCTTGTATTTCTTTAAAAACCCTCTTTGCTTCCTCCAAGTGGAGTGGGTTGTACTTCTGAGGTCAGGACAAACTGGGCACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 90 bp TGTCACTGGAGATACTTGTTTGTGCACAACTTCAGCCACAATTCATaGGGACCCTGCAGAAGAGACCCTCAGAATGTGATCTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: CHWRYLFVHNFSHNS*GPCRRDPQNVILEM
Trigger: CATCTCTAAGATCACATTCTGAGGGTCTCTTCTGCAGGGTCCCCATGAATTGTGGCTGAAGTTGTGCACAAACAAGTATCTCCAGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580220.2
ENST00000633924.1
CDS CCA 90 bp GGCTCCAAAGGAATATGGTTCTGTCCTAGACAGAGGAGGCTTTATTaGGAGGCTAATAAGCTTATGCTTAAGGCCCACTACTGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: GSKGIWFCPRQRRLY*EANKLMLKAHYCRV
Trigger: AACTCTGCAGTAGTGGGCCTTAAGCATAAGCTTATTAGCCTCCCAATAAAGCCTCCTCTGTCTAGGACAGAACCATATTCCTTTGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp AATACCAGGTGGGCTGGGAATCTCACATCTCCCAAATTAGCCTCTTaGTTCTGTCACAAACTTTCAGAACTCAAAGGCTTGTGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: NTRWAGNLTSPKLAS*FCHKLSELKGLWFW
Trigger: CCAGAACCACAAGCCTTTGAGTTCTGAAAGTTTGTGACAGAATCAAGAGGCTAATTTGGGAGATGTGAGATTCCCAGCCCACCTGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS GCA 90 bp AGATACTTGTTTGTGCACAACTTCAGCCACAATTCATGGGGACCCTaGAGAAGAGACCCTCAGAATGTGATCTTAGAGATGGGATCTTCA +
Preference number: 5 (lower is better)
Translates to: RYLFVHNFSHNSWGP*RRDPQNVILEMGSS
Trigger: TGAAGATCCCATCTCTAAGATCACATTCTGAGGGTCTCTTCTGCAGGGTCCCCATGAATTGTGGCTGAAGTTGTGCACAAACAAGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580220.2
ENST00000633924.1
CDS CCA 90 bp CTGTTGGGGGAAAACACATTGACATCTACTGGCTCCAAAGGAATATaGTTCTGTCCTAGACAGAGGAGGCTTTATTGGGAGGCTAATAAG +
Preference number: 5 (lower is better)
Translates to: LLGENTLTSTGSKGI*FCPRQRRLYWEANK
Trigger: CTTATTAGCCTCCCAATAAAGCCTCCTCTGTCTAGGACAGAACCATATTCCTTTGGAGCCAGTAGATGTCAATGTGTTTTCCCCCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp AAACAATCCAATCAGGTTTACATTGGCGGTTCAATTAGGCACATATaGAGTAGTCACTCCAAAGCGGTTCACAGCAAATTTATTCCTGGG +
Preference number: 5 (lower is better)
Translates to: KQSNQVYIGGSIRHI*SSHSKAVHSKFIPG
Trigger: CCCAGGAATAAATTTGCTGTGAACCGCTTTGGAGTGACTACTTCATATGTGCCTAATTGAACCGCCAATGTAAACCTGATTGGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS TCA 90 bp GTCCATTATCAAAGAAATAATACAAAATCACTTCCTAGGACTGAATaGCCTGCATCTGCAGAGTTTACGAGCCCATTGTGCACCCAATAC +
Preference number: 5 (lower is better)
Translates to: VHYQRNNTKSLPRTE*PASAEFTSPLCTQY
Trigger: GTATTGGGTGCACAATGGGCTCGTAAACTCTGCAGATGCAGGTCATTCAGTCCTAGGAAGTGATTTTGTATTATTTCTTTGATAATGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 90 bp AAGAAGACACTCAAGTTGTCTAAATTCATCGACTTTTCTGAAATTTaGAATCTGCAATTTCCCGAGCTGTGTTCTGTTGTTAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: KKTLKLSKFIDFSEI*NLQFPELCSVVKWL
Trigger: CAGCCACTTAACAACAGAACACAGCTCGGGAAATTGCAGATTTCAAATTTCAGAAAAGTCGATGAATTTAGACAACTTGAGTGTCTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS TCA 90 bp GAGCCCTCAGAGATAGATTCTCTTGTCCTAGACAACTTTGTTATTTaGTTATCTACACTGCAGCTCTTTCTTGCTAATTTACCACTTTTA +
Preference number: 5 (lower is better)
Translates to: EPSEIDSLVLDNFVI*LSTLQLFLANLPLL
Trigger: TAAAAGTGGTAAATTAGCAAGAAAGAGCTGCAGTGTAGATAATCAAATAACAAAGTTGTCTAGGACAAGAGAATCTATCTCTGAGGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 72 bp CCTGATGCTGCCCTGCCACATGCTGCTTGGCCTTCCTaGGCCCTGGGCACCTCGCCCCTCCCCGAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: PDAALPHAAWPS*ALGTSPLPELS
Trigger: GGACAACTCGGGGAGGGGCGAGGTGCCCAGGGCCCAGGAAGGCCAAGCAGCATGTGGCAGGGCAGCATCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS GCA 72 bp ACATCATCTTGCTCGCCTCAGGGGACCCACCCCTCCTaGAGCCTCGGAAGGCTGAACTCCTCCGGTGCCCAG +
Preference number: 6 (lower is better)
Translates to: TSSCSPQGTHPS*SLGRLNSSGAQ
Trigger: CTGGGCACCGGAGGAGTTCAGCCTTCCGAGGCTGCAGGAGGGGTGGGTCCCCTGAGGCGAGCAAGATGATGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS TCA 72 bp ACAGCTGAACTCAGTCCCCGCTCCAACTCGCCTCCATaGAGCCCGCTCTGGCCTTCGAGCACCAGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: TAELSPRSNSPP*SPLWPSSTSKP
Trigger: GGGCTTGCTGGTGCTCGAAGGCCAGAGCGGGCTTCATGGAGGCGAGTTGGAGCGGGGACTGAGTTCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS CCA 72 bp GCTGAGGCCAATAGCAGCTCTCTTTTCGGTGGGGGCTaGGCAGGCTCCGTCTTCAGGGCCTGGGTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: AEANSSSLFGGG*AGSVFRAWVSP
Trigger: TGGAGACACCCAGGCCCTGAAGACGGAGCCTGCCCAGCCCCCACCGAAAAGAGAGCTGCTATTGGCCTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp ACTGCAGGCTCCCAGAGCTTCCTGGGGACTGAGGCTTaGGGACATGTGGGACGCTCAGATGGAGAAGGCCCG +
Preference number: 6 (lower is better)
Translates to: TAGSQSFLGTEA*GHVGRSDGEGP
Trigger: CGGGCCTTCTCCATCTGAGCGTCCCACATGTCCCCAAGCCTCAGTCCCCAGGAAGCTCTGGGAGCCTGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp CGTGATCCTGGAGCACTGCAGGCTCCCAGAGCTTCCTaGGGACTGAGGCTTGGGGACATGTGGGACGCTCAG +
Preference number: 6 (lower is better)
Translates to: RDPGALQAPRAS*GLRLGDMWDAQ
Trigger: CTGAGCGTCCCACATGTCCCCAAGCCTCAGTCCCCAGGAAGCTCTGGGAGCCTGCAGTGCTCCAGGATCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp AAGGCTCGGGGAGATGACAGAGACCCAGTGGGTCCCTaGCAAGGCCTGGTCATCTGGCAAGGTGAAGAGGGC +
Preference number: 6 (lower is better)
Translates to: KARGDDRDPVGP*QGLVIWQGEEG
Trigger: GCCCTCTTCACCTTGCCAGATGACCAGGCCTTGCCAGGGACCCACTGGGTCTCTGTCATCTCCCCGAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp AGGGTAGATCCAGGTCCCATGGGCCGTGGTCTCCGCTaGCCTAACAGCAGGCCTCTGTGCTGTGGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: RVDPGPMGRGLR*PNSRPLCCGSF
Trigger: GAAAGAGCCACAGCACAGAGGCCTGCTGTTAGGTCAGCGGAGACCACGGCCCATGGGACCTGGATCTACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS GCA 72 bp CCCCTCCTGCAGCCTCGGAAGGCTGAACTCCTCCGGTaGCCAGTTTGTCCTGACCTCAGAAGTACAACCCAC +
Preference number: 6 (lower is better)
Translates to: PLLQPRKAELLR*PVCPDLRSTTH
Trigger: GTGGGTTGTACTTCTGAGGTCAGGACAAACTGGGCACCGGAGGAGTTCAGCCTTCCGAGGCTGCAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 72 bp AGCACTGACCAGGAAGGAAGGGCTGTCACTACTCCCTaGCGATTTGCTCAGTGCAGGCTCTGGGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: STDQEGRAVTTP*RFAQCRLWASG
Trigger: GCCAGAGGCCCAGAGCCTGCACTGAGCAAATCGCCAGGGAGTAGTGACAGCCCTTCCTTCCTGGTCAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp AAACAGCCGGCCAGATGGTCAGCTCGCTTTGCCAGGTaGCCAGATCCCTGCCAGCACGGCTGTCTGAAAATG +
Preference number: 6 (lower is better)
Translates to: KQPARWSARFAR*PDPCQHGCLKM
Trigger: CATTTTCAGACAGCCGTGCTGGCAGGGATCTGGGCACCTGGCAAAGCGAGCTGACCATCTGGCCGGCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp CTGCAGTGGTTCCTAGGGGGCCAAGTGGGGGCTGGGTaGCTTAATTTGGTGAGGTGTGAATGTGATGGCGGG +
Preference number: 6 (lower is better)
Translates to: LQWFLGGQVGAG*LNLVRCECDGG
Trigger: CCCGCCATCACATTCACACCTCACCAAATTAAGCCACCCAGCCCCCACTTGGCCCCCTAGGAACCACTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp AGAAGCCTTCCTCTGCAGAGCCCACCGTCTCTTCCCTaGCACGTCCTTCCCTCCCTAACTCTCCTTGTCGTC +
Preference number: 6 (lower is better)
Translates to: RSLPLQSPPSLP*HVLPSLTLLVV
Trigger: GACGACAAGGAGAGTTAGGGAGGGAAGGACGTGCCAGGGAAGAGACGGTGGGCTCTGCAGAGGAAGGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp CAGGTTGGTCACTTTAAGCCAGGCTTCCAGCAGGGGTaGGAGGCTGCTCCGTGTCAAGACTTGTGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: QVGHFKPGFQQG*EAAPCQDLCRG
Trigger: ACCCCTGCACAAGTCTTGACACGGAGCAGCCTCCCACCCCTGCTGGAAGCCTGGCTTAAAGTGACCAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp ACAGGACTCCAGACGCCAGACCAGGATTGCAACAGCTaGACTCAGTCCCCGCTCCAACTCGCCTCCATGAAG +
Preference number: 6 (lower is better)
Translates to: TGLQTPDQDCNS*TQSPLQLASMK
Trigger: CTTCATGGAGGCGAGTTGGAGCGGGGACTGAGTTCAGCTGTTGCAATCCTGGTCTGGCGTCTGGAGTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS GCA 72 bp AGAAAGCTGCCTCCACTCCCAGCACACACGTACACGTaGACACAGCAGAGGCTAGCTGATGTGGCCACAAGG +
Preference number: 6 (lower is better)
Translates to: RKLPPLPAHTYT*TQQRLADVATR
Trigger: CCTTGTGGCCACATCAGCTAGCCTCTGCTGTGTGCACGTGTACGTGTGTGCTGGGAGTGGAGGCAGCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS GCA 72 bp AAAGTTTTACCCTGCTCGTTGCCCCACTTAGCCCTCTaGAGGTCGAGGAAGCAGAGGAGGGAGCCACTCCTG +
Preference number: 6 (lower is better)
Translates to: KVLPCSLPHLAL*RSRKQRREPLL
Trigger: CAGGAGTGGCTCCCTCCTCTGCTTCCTCGACCTGCAGAGGGCTAAGTGGGGCAACGAGCAGGGTAAAACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS GCA 72 bp CTGTTCTGCCTAGCTGTGGGCACTCGGAGGGTCCTGTaGAGGGCTCACTGTTTATTCCATCTCTGTAGCCCC +
Preference number: 6 (lower is better)
Translates to: LFCLAVGTRRVL*RAHCLFHLCSP
Trigger: GGGGCTACAGAGATGGAATAAACAGTGAGCCCTGCACAGGACCCTCCGAGTGCCCACAGCTAGGCAGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp GTAGTAAAAGCATGTCCAAGGCATCAGGGCCACTGGTaGGAGGTAGGGACTCCCGTGATCCTGGAGCACTGC +
Preference number: 6 (lower is better)
Translates to: VVKACPRHQGHW*EVGTPVILEHC
Trigger: GCAGTGCTCCAGGATCACGGGAGTCCCTACCTCCCACCAGTGGCCCTGATGCCTTGGACATGCTTTTACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp GTGGTAGTAAAAGCATGTCCAAGGCATCAGGGCCACTaGTGGGAGGTAGGGACTCCCGTGATCCTGGAGCAC +
Preference number: 6 (lower is better)
Translates to: VVVKACPRHQGH*WEVGTPVILEH
Trigger: GTGCTCCAGGATCACGGGAGTCCCTACCTCCCACCAGTGGCCCTGATGCCTTGGACATGCTTTTACTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp CCTGGCCTCAGAACCTGCCCTTCTAACCATGCAGTGTaGCACGTAATCATGGCCGTGGCAGGGAGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: PGLRTCPSNHAV*HVIMAVAGSSL
Trigger: AAGACTGCTCCCTGCCACGGCCATGATTACGTGTCACACTGCATGGTTAGAAGGGCAGGTTCTGAGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp GCAATGTCTGGTTCTGCACAATCCAGGGGAGACCTGTaGGTGACATCCCTGTCATTAGCAGGGCAGAGGGGC +
Preference number: 6 (lower is better)
Translates to: AMSGSAQSRGDL*VTSLSLAGQRG
Trigger: GCCCCTCTGCCCTGCTAATGACAGGGATGTCACTCACAGGTCTCCCCTGGATTGTGCAGAACCAGACATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp GAACATTTATCTCAGAGCAGGGAGGGATGTAGCAGCTaGAGTCGCAGGGGACCGAGACCCAAGACGGTGATG +
Preference number: 6 (lower is better)
Translates to: EHLSQSREGCSS*SRRGPRPKTVM
Trigger: CATCACCGTCTTGGGTCTCGGTCCCCTGCGACTGCAGCTGCTACATCCCTCCCTGCTCTGAGATAAATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS GCA 72 bp GGTGATGGTCTCCAGGAGGACTTATTTGGCCTCCGGTaGCAACTGTGGGTCAAAGGAGCCCAGCTCCCAAAA +
Preference number: 6 (lower is better)
Translates to: GDGLQEDLFGLR*QLWVKGAQLPK
Trigger: TTTTGGGAGCTGGGCTCCTTTGACCCACAGTTGGCACCGGAGGCCAAATAAGTCCTCCTGGAGACCATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp TCCCTCCTTCTTTGCCATGGCTTGGGGGCAGGGGCTTaGTCTTCAGCAGATTCCAAGGCAGTAGGGTGTACT +
Preference number: 6 (lower is better)
Translates to: SLLLCHGLGAGA*SSADSKAVGCT
Trigger: AGTACACCCTACTGCCTTGGAATCTGCTGAAGACCAAGCCCCTGCCCCCAAGCCATGGCAAAGAAGGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS CCA 72 bp AAGCTGCTGGCTGGATGGACTGAGAGCCAGGATTCGTaGCTTGGTTCTGTTCGCACTGTCTCTGCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: KLLAGWTESQDS*LGSVRTVSAAK
Trigger: CTTGGCAGCAGAGACAGTGCGAACAGAACCAAGCCACGAATCCTGGCTCTCAGTCCATCCAGCCAGCAGCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp CACCATCTCTTTTTGTTGCAGAAACAGCCGGCCAGATaGTCAGCTCGCTTTGCCAGGTGCCCAGATCCCTGC +
Preference number: 6 (lower is better)
Translates to: HHLFLLQKQPAR*SARFARCPDPC
Trigger: GCAGGGATCTGGGCACCTGGCAAAGCGAGCTGACCATCTGGCCGGCTGTTTCTGCAACAAAAAGAGATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp CCAAAGACTAACAGGACTCCAGACGCCAGACCAGGATaGCAACAGCTGAACTCAGTCCCCGCTCCAACTCGC +
Preference number: 6 (lower is better)
Translates to: PKTNRTPDARPG*QQLNSVPAPTR
Trigger: GCGAGTTGGAGCGGGGACTGAGTTCAGCTGTTGCAATCCTGGTCTGGCGTCTGGAGTCCTGTTAGTCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS CAA 72 bp TTCCCTCCTTCTTTGCCATGGCTTGGGGGCAGGGGCTaGGTCTTCAGCAGATTCCAAGGCAGTAGGGTGTAC +
Preference number: 6 (lower is better)
Translates to: FPPSLPWLGGRG*VFSRFQGSRVY
Trigger: GTACACCCTACTGCCTTGGAATCTGCTGAAGACCAAGCCCCTGCCCCCAAGCCATGGCAAAGAAGGAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS CAA 72 bp GCTGATGAGAAGGTGATGGTCTCCAGGAGGACTTATTaGGCCTCCGGTGCCAACTGTGGGTCAAAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: ADEKVMVSRRTY*ASGANCGSKEP
Trigger: GGGCTCCTTTGACCCACAGTTGGCACCGGAGGCCAAATAAGTCCTCCTGGAGACCATCACCTTCTCATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp TTGCCAGGTGCCCAGATCCCTGCCAGCACGGCTGTCTaGAAATGTCAGCAGAGTAAAGGTGTGTTCCCACAG +
Preference number: 6 (lower is better)
Translates to: LPGAQIPASTAV*KCQQSKGVFPQ
Trigger: CTGTGGGAACACACCTTTACTCTGCTGACATTTTCAGACAGCCGTGCTGGCAGGGATCTGGGCACCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp GATATTGGGGCACCTAGGGCACCAAGCACACAGACATaGCCCCAAGACCTGGAACCGATGCACAATTGGCCA +
Preference number: 6 (lower is better)
Translates to: DIGAPRAPSTQT*PQDLEPMHNWP
Trigger: TGGCCAATTGTGCATCGGTTCCAGGTCTTGGGGTCATGTCTGTGTGCTTGGTGCCCTAGGTGCCCCAATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp GCAGAGGGGCACTGTCCACGGATAAGCTTTCGAATGTaGCAGCCAAGCTGTCAGCCAGCAGACCCATTCACT +
Preference number: 6 (lower is better)
Translates to: AEGHCPRISFRM*QPSCQPADPFT
Trigger: AGTGAATGGGTCTGCTGGCTGACAGCTTGGCTGTCACATTCGAAAGCTTATCCGTGGACAGTGCCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp CCATTCCTCAGCACGCATTTGCGGAGTGCCACTATGTaGTCGGTCCTGCAGAGAAAGCTGAGACTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: PFLSTHLRSATM*SVLQRKLRLGC
Trigger: ACAGCCAAGTCTCAGCTTTCTCTGCAGGACCGAGCACATAGTGGCACTCCGCAAATGCGTGCTGAGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp CACTGGGAAGCCCCGTCTCACTTTCCTCCAAGTGGGTaGAGTTCAGGTTTCGTGAGTGCCTTCAGTTGGGAA +
Preference number: 6 (lower is better)
Translates to: HWEAPSHFPPSG*SSGFVSAFSWE
Trigger: TTCCCAACTGAAGGCACTCACGAAACCTGAACTGCACCCACTTGGAGGAAAGTGAGACGGGGCTTCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp AGGCACAAGAATTGCTTGAACCTGAGAGGCGGAAGTTaGAGTCAGCAGAGATCGCACCACTGGACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RHKNCLNLRGGS*SQQRSHHWTPA
Trigger: GGCTGGAGTCCAGTGGTGCGATCTCTGCTGACTGCAACTTCCGCCTCTCAGGTTCAAGCAATTCTTGTGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp CATTACCACAGGCACAGAGATGGATTCCTCTACACTTaGGAAACCCCAAGGCTGACCCCAGCCAGGGATGCA +
Preference number: 6 (lower is better)
Translates to: HYHRHRDGFLYT*ETPRLTPARDA
Trigger: TGCATCCCTGGCTGGGGTCAGCCTTGGGGTTTCCCAAGTGTAGAGGAATCCATCTCTGTGCCTGTGGTAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS CCA 72 bp TGCAGGTCGAGGAAGCAGAGGAGGGAGCCACTCCTGTaGACTCAATTCTCACCCTCGCTGGTGAAAACAGAA +
Preference number: 6 (lower is better)
Translates to: CRSRKQRREPLL*TQFSPSLVKTE
Trigger: TTCTGTTTTCACCAGCGAGGGTGAGAATTGAGTCCACAGGAGTGGCTCCCTCCTCTGCTTCCTCGACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 72 bp CTCCAGGAGGACTTATTTGGCCTCCGGTGCCAACTGTaGGTCAAAGGAGCCCAGCTCCCAAAACCTTTGACA +
Preference number: 6 (lower is better)
Translates to: LQEDLFGLRCQL*VKGAQLPKPLT
Trigger: TGTCAAAGGTTTTGGGAGCTGGGCTCCTTTGACCCACAGTTGGCACCGGAGGCCAAATAAGTCCTCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp GAGGCACAAGAATTGCTTGAACCTGAGAGGCGGAAGTaGCAGTCAGCAGAGATCGCACCACTGGACTCCAGC +
Preference number: 6 (lower is better)
Translates to: EAQELLEPERRK*QSAEIAPLDSS
Trigger: GCTGGAGTCCAGTGGTGCGATCTCTGCTGACTGCAACTTCCGCCTCTCAGGTTCAAGCAATTCTTGTGCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 90 bp GAAAGGATGCCAAAGACTAACAGGACTCCAGACGCCAGACCAGGATaGCAACAGCTGAACTCAGTCCCCGCTCCAACTCGCCTCCATGAA +
Preference number: 6 (lower is better)
Translates to: ERMPKTNRTPDARPG*QQLNSVPAPTRLHE
Trigger: TTCATGGAGGCGAGTTGGAGCGGGGACTGAGTTCAGCTGTTGCAATCCTGGTCTGGCGTCTGGAGTCCTGTTAGTCTTTGGCATCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS CAA 90 bp CTCCGGTGCCAACTGTGGGTCAAAGGAGCCCAGCTCCCAAAACCTTaGACACCATCTCTTTTTGTTGCAGAAACAGCCGGCCAGATGGTC +
Preference number: 6 (lower is better)
Translates to: LRCQLWVKGAQLPKP*TPSLFVAETAGQMV
Trigger: GACCATCTGGCCGGCTGTTTCTGCAACAAAAAGAGATGGTGTCAAAGGTTTTGGGAGCTGGGCTCCTTTGACCCACAGTTGGCACCGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 90 bp TGGAAGATTGCTGATGAGAAGGTGATGGTCTCCAGGAGGACTTATTaGGCCTCCGGTGCCAACTGTGGGTCAAAGGAGCCCAGCTCCCAA +
Preference number: 6 (lower is better)
Translates to: WKIADEKVMVSRRTY*ASGANCGSKEPSSQ
Trigger: TTGGGAGCTGGGCTCCTTTGACCCACAGTTGGCACCGGAGGCCAAATAAGTCCTCCTGGAGACCATCACCTTCTCATCAGCAATCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp GGAGTGCCACTATGTGCTCGGTCCTGCAGAGAAAGCTaGGACTTGGCTGTTCTTGGCCTCAAGAACTCAAGG +
Preference number: 6 (lower is better)
Translates to: GVPLCARSCRES*DLAVLGLKNSR
Trigger: CCTTGAGTTCTTGAGGCCAAGAACAGCCAAGTCTCAGCTTTCTCTGCAGGACCGAGCACATAGTGGCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp CAAGCACACAGACATGACCCCAAGACCTGGAACCGATaGACAATTGGCCACAGAGATGACAACAGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: QAHRHDPKTWNR*TIGHRDDNSPR
Trigger: TCTGGGGCTGTTGTCATCTCTGTGGCCAATTGTGCATCGGTTCCAGGTCTTGGGGTCATGTCTGTGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp TCTCCTGGTGTCCAGCCATTACCACAGGCACAGAGATaGATTCCTCTACACTTGGGAAACCCCAAGGCTGAC +
Preference number: 6 (lower is better)
Translates to: SPGVQPLPQAQR*IPLHLGNPKAD
Trigger: GTCAGCCTTGGGGTTTCCCAAGTGTAGAGGAATCCATCTCTGTGCCTGTGGTAATGGCTGGACACCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS CCA 72 bp TTCTCACTGGGAAGCCCCGTCTCACTTTCCTCCAAGTaGGTGCAGTTCAGGTTTCGTGAGTGCCTTCAGTTG +
Preference number: 6 (lower is better)
Translates to: FSLGSPVSLSSK*VQFRFRECLQL
Trigger: CAACTGAAGGCACTCACGAAACCTGAACTGCACCCACTTGGAGGAAAGTGAGACGGGGCTTCCCAGTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp TTGTTTGTTCCCTCTGTAGCCTTTGACGCATCTCCCTaGGTTCTCACTGGGAAGCCCCGTCTCACTTTCCTC +
Preference number: 6 (lower is better)
Translates to: LFVPSVAFDASP*VLTGKPRLTFL
Trigger: GAGGAAAGTGAGACGGGGCTTCCCAGTGAGAACCCAGGGAGATGCGTCAAAGGCTACAGAGGGAACAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp CAGGGGCATCTTGAGTCAGATGTGCTTCTCCCTGGGTaGGTGATAATCTCAGTCCTGCCACAGAGGCAAGTA +
Preference number: 6 (lower is better)
Translates to: QGHLESDVLLPG*VIISVLPQRQV
Trigger: TACTTGCCTCTGTGGCAGGACTGAGATTATCACCCACCCAGGGAGAAGCACATCTGACTCAAGATGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp CAAGCCCCTGGTCACACAAATGCTAAACGGTGGAGCTaGGATTCCAAACAGGATGTGGTGGCGCCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: QAPGHTNAKRWS*DSKQDVVAPKP
Trigger: AGGCTTTGGCGCCACCACATCCTGTTTGGAATCCAAGCTCCACCGTTTAGCATTTGTGTGACCAGGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp CTGGTTTTCTGTGCCCATCCTACTCTTCCTCTGCCTTaGTGGTACCTGCACAGACTCAGGGGCATCTTGAGT +
Preference number: 6 (lower is better)
Translates to: LVFCAHPTLPLP*WYLHRLRGILS
Trigger: ACTCAAGATGCCCCTGAGTCTGTGCAGGTACCATCAAGGCAGAGGAAGAGTAGGATGGGCACAGAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp CCCTCGCTGGTGAAAACAGAAATGATGGGTTCACATTaGTCACAGCTCCCCCTGGAACGACTTCCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: PSLVKTEMMGSH*SQLPLERLPSL
Trigger: GAGAGAAGGAAGTCGTTCCAGGGGGAGCTGTGAGCAATGTGAACCCATCATTTCTGTTTTCACCAGCGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 72 bp GTCAGCCTAGCAGAGTGTCAGCAGATGAAGATGCAATaGCTGCCTCAGAAGGCACTCCTGTCACTGGAGATA +
Preference number: 6 (lower is better)
Translates to: VSLAECQQMKMQ*LPQKALLSLEI
Trigger: TATCTCCAGTGACAGGAGTGCCTTCTGAGGCAGCCATTGCATCTTCATCTGCTGACACTCTGCTAGGCTGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000455565.5
ENST00000580220.2
ENST00000582491.5
ENST00000583740.5
ENST00000585118.5
ENST00000585122.5
ENST00000591271.5
ENST00000631721.1
ENST00000632092.1
ENST00000632544.1
ENST00000632929.1
ENST00000633571.1
ENST00000633823.1
ENST00000633924.1
CDS CCA 72 bp CCTCTCCGCCCTTCACATCCTTCCGTGGTTAAATGTTaGCTTCTCTCTTCCCATCTGTGGCTGTCTGTTACC +
Preference number: 6 (lower is better)
Translates to: PLRPSHPSVVKC*LLSSHLWLSVT
Trigger: GGTAACAGACAGCCACAGATGGGAAGAGAGAAGCCAACATTTAACCACGGAAGGATGTGAAGGGCGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 72 bp GCCTGTCTCAGCAGCAAGCACTTGTCAGCCAGATCTTaGAGGCCAAAGCCTGTCTACCCTAACACAAAGAAG +
Preference number: 6 (lower is better)
Translates to: ACLSSKHLSARS*RPKPVYPNTKK
Trigger: CTTCTTTGTGTTAGGGTAGACAGGCTTTGGCCTCCAAGATCTGGCTGACAAGTGCTTGCTGCTGAGACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 72 bp TTGGACATGTTTAATCAAGCTGCCCTGATTTACTGCTaGCTGCATTCTCCAGGCACAGCGCCATCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: LDMFNQAALIYC*LHSPGTAPSAG
Trigger: CCCTGCAGATGGCGCTGTGCCTGGAGAATGCAGCCAGCAGTAAATCAGGGCAGCTTGATTAAACATGTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp AGTGGGTGCAGTTCAGGTTTCGTGAGTGCCTTCAGTTaGGAACAAGAGGCTCCGCTACCCCTAAACTCAAAC +
Preference number: 6 (lower is better)
Translates to: SGCSSGFVSAFS*EQEAPLPLNSN
Trigger: GTTTGAGTTTAGGGGTAGCGGAGCCTCTTGTTCCCAACTGAAGGCACTCACGAAACCTGAACTGCACCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp TCTGAAATTAGGGGACAGCATTTAGTGAGGGCCTTTTaGCTGCATTGTAACAGGTGGAGGATGGCCGGGCAC +
Preference number: 6 (lower is better)
Translates to: SEIRGQHLVRAF*LHCNRWRMAGH
Trigger: GTGCCCGGCCATCCTCCACCTGTTACAATGCAGCCAAAAGGCCCTCACTAAATGCTGTCCCCTAATTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp ACAGACATGACCCCAAGACCTGGAACCGATGCACAATaGGCCACAGAGATGACAACAGCCCCAGATAACACC +
Preference number: 6 (lower is better)
Translates to: TDMTPRPGTDAQ*ATEMTTAPDNT
Trigger: GGTGTTATCTGGGGCTGTTGTCATCTCTGTGGCCAATTGTGCATCGGTTCCAGGTCTTGGGGTCATGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp TCTGGTTTTCTGTGCCCATCCTACTCTTCCTCTGCCTaGATGGTACCTGCACAGACTCAGGGGCATCTTGAG +
Preference number: 6 (lower is better)
Translates to: SGFLCPSYSSSA*MVPAQTQGHLE
Trigger: CTCAAGATGCCCCTGAGTCTGTGCAGGTACCATCAAGGCAGAGGAAGAGTAGGATGGGCACAGAAAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 90 bp TGCTTCCCATCTGGTTTTCTGTGCCCATCCTACTCTTCCTCTGCCTaGATGGTACCTGCACAGACTCAGGGGCATCTTGAGTCAGATGTG +
Preference number: 6 (lower is better)
Translates to: CFPSGFLCPSYSSSA*MVPAQTQGHLESDV
Trigger: CACATCTGACTCAAGATGCCCCTGAGTCTGTGCAGGTACCATCAAGGCAGAGGAAGAGTAGGATGGGCACAGAAAACCAGATGGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp AGCACACACGTACACGTGCACACAGCAGAGGCTAGCTaGTGTGGCCACAAGGCACAAAGAATAGATCCTTCT +
Preference number: 6 (lower is better)
Translates to: STHVHVHTAEAS*CGHKAQRIDPS
Trigger: AGAAGGATCTATTCTTTGTGCCTTGTGGCCACATCAGCTAGCCTCTGCTGTGTGCACGTGTACGTGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS TCA 72 bp AACTGTGGGTCAAAGGAGCCCAGCTCCCAAAACCTTTaGCACCATCTCTTTTTGTTGCAGAAACAGCCGGCC +
Preference number: 6 (lower is better)
Translates to: NCGSKEPSSQNL*HHLFLLQKQPA
Trigger: GGCCGGCTGTTTCTGCAACAAAAAGAGATGGTGTCAAAGGTTTTGGGAGCTGGGCTCCTTTGACCCACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp GCTATCACCTGTGCAGCTAGACCAGAAGATAGACTGTaGGATATCAGTAACCCCTTCCCACACCCAGACCCA +
Preference number: 6 (lower is better)
Translates to: AITCAARPEDRL*DISNPFPHPDP
Trigger: TGGGTCTGGGTGTGGGAAGGGGTTACTGATATCTCACAGTCTATCTTCTGGTCTAGCTGCACAGGTGATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp GAAAGTCAAGCCTGCAGTGAGCCGAGATGGCACCAATaGACTGGTGCATTAGACAATGCCTGGACAATGAAC +
Preference number: 6 (lower is better)
Translates to: ESQACSEPRWHQ*TGALDNAWTMN
Trigger: GTTCATTGTCCAGGCATTGTCTAATGCACCAGTGCATTGGTGCCATCTCGGCTCACTGCAGGCTTGACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS GCA 72 bp CCAGCTCCCAAAACCTTTGACACCATCTCTTTTTGTTaGAGAAACAGCCGGCCAGATGGTCAGCTCGCTTTG +
Preference number: 6 (lower is better)
Translates to: PAPKTFDTISFC*RNSRPDGQLAL
Trigger: CAAAGCGAGCTGACCATCTGGCCGGCTGTTTCTGCAACAAAAAGAGATGGTGTCAAAGGTTTTGGGAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp GTCATCTGGCAAGGTGAAGAGGGCCTCAGAAACCACTaGTGGCGTGTGCTTTTCTGCTGGTTAAACATTCCA +
Preference number: 6 (lower is better)
Translates to: VIWQGEEGLRNH*WRVLFCWLNIP
Trigger: TGGAATGTTTAACCAGCAGAAAAGCACACGCCAGCAGTGGTTTCTGAGGCCCTCTTCACCTTGCCAGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp CTGACCTGCCTGATTATCTCCAACACTACATCTAACTaGTGGGGACCTGTGGCTATCACCTGTGCAGCTAGA +
Preference number: 6 (lower is better)
Translates to: LTCLIISNTTSN*WGPVAITCAAR
Trigger: TCTAGCTGCACAGGTGATAGCCACAGGTCCCCACCAGTTAGATGTAGTGTTGGAGATAATCAGGCAGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp GCCTCAGAAGGCACTCCTGTCACTGGAGATACTTGTTaGTGCACAACTTCAGCCACAATTCATGGGGACCCT +
Preference number: 6 (lower is better)
Translates to: ASEGTPVTGDTC*CTTSATIHGDP
Trigger: AGGGTCCCCATGAATTGTGGCTGAAGTTGTGCACAAACAAGTATCTCCAGTGACAGGAGTGCCTTCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000455565.5
ENST00000580220.2
ENST00000582491.5
ENST00000583740.5
ENST00000585118.5
ENST00000585122.5
ENST00000591271.5
ENST00000631721.1
ENST00000632092.1
ENST00000632544.1
ENST00000632929.1
ENST00000633571.1
ENST00000633823.1
ENST00000633924.1
CDS CAA 72 bp CAACTGTGGGTCAAAGGAGCCCAGCTCCCAAAACCTTaGACACCATCTCTTTTTGTTGCAGAAACAGCCGGC +
Preference number: 6 (lower is better)
Translates to: QLWVKGAQLPKP*TPSLFVAETAG
Trigger: GCCGGCTGTTTCTGCAACAAAAAGAGATGGTGTCAAAGGTTTTGGGAGCTGGGCTCCTTTGACCCACAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp AAGTGGGTGCAGTTCAGGTTTCGTGAGTGCCTTCAGTaGGGAACAAGAGGCTCCGCTACCCCTAAACTCAAA +
Preference number: 6 (lower is better)
Translates to: KWVQFRFRECLQ*GTRGSATPKLK
Trigger: TTTGAGTTTAGGGGTAGCGGAGCCTCTTGTTCCCAACTGAAGGCACTCACGAAACCTGAACTGCACCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 90 bp TCAATTCTCACCCTCGCTGGTGAAAACAGAAATGATGGGTTCACATaGCTCACAGCTCCCCCTGGAACGACTTCCTTCTCTCCACTTCCA +
Preference number: 6 (lower is better)
Translates to: SILTLAGENRNDGFT*LTAPPGTTSFSPLP
Trigger: TGGAAGTGGAGAGAAGGAAGTCGTTCCAGGGGGAGCTGTGAGCAATGTGAACCCATCATTTCTGTTTTCACCAGCGAGGGTGAGAATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CAA 90 bp GTGGATGATGACATCAGTAATGACAATCCATTCCTCAGCACGCATTaGCGGAGTGCCACTATGTGCTCGGTCCTGCAGAGAAAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: VDDDISNDNPFLSTH*RSATMCSVLQRKLR
Trigger: TCTCAGCTTTCTCTGCAGGACCGAGCACATAGTGGCACTCCGCAAATGCGTGCTGAGGAATGGATTGTCATTACTGATGTCATCATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp CTGATGTGGCCACAAGGCACAAAGAATAGATCCTTCTaGTCAGTTCTGGTTCTGGAACTGGTTGGCGAGCCA +
Preference number: 6 (lower is better)
Translates to: LMWPQGTKNRSF*SVLVLELVGEP
Trigger: TGGCTCGCCAACCAGTTCCAGAACCAGAACTGATCAGAAGGATCTATTCTTTGTGCCTTGTGGCCACATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS GCA 72 bp GCGGAGGGAATGGAGGCCGAGCTTGTCCGTTATCTCTaGCGCGTTCATAGTATTAGGGAGATCTTGTTTATT +
Preference number: 6 (lower is better)
Translates to: AEGMEAELVRYL*RVHSIREILFI
Trigger: AATAAACAAGATCTCCCTAATACTATGAACGCGGCAGAGATAACGGACAAGCTCGGCCTCCATTCCCTCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444561.2
ENST00000633957.1
CDS GCA 72 bp TCAGAAGGCACTCCTGTCACTGGAGATACTTGTTTGTaGACAACTTCAGCCACAATTCATGGGGACCCTGCA +
Preference number: 6 (lower is better)
Translates to: SEGTPVTGDTCL*TTSATIHGDPA
Trigger: TGCAGGGTCCCCATGAATTGTGGCTGAAGTTGTGCACAAACAAGTATCTCCAGTGACAGGAGTGCCTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000455565.5
ENST00000580220.2
ENST00000582491.5
ENST00000583740.5
ENST00000585118.5
ENST00000585122.5
ENST00000591271.5
ENST00000631721.1
ENST00000632092.1
ENST00000632544.1
ENST00000632929.1
ENST00000633571.1
ENST00000633823.1
ENST00000633924.1
CDS GCA 72 bp GACAGAGGAGGCTTTATTGGGAGGCTAATAAGCTTATaGTTAAGGCCCACTACTGCAGAGTTTACGAGCCCC +
Preference number: 6 (lower is better)
Translates to: DRGGFIGRLISL*LRPTTAEFTSP
Trigger: GGGGCTCGTAAACTCTGCAGTAGTGGGCCTTAAGCATAAGCTTATTAGCCTCCCAATAAAGCCTCCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp AAGCCCGCTCTGGCCTTCGAGCACCAGCAAGCCCTCTaGACTTCTCCATCAATTGCAAAAATGATCATCAAA +
Preference number: 6 (lower is better)
Translates to: KPALAFEHQQAL*TSPSIAKMIIK
Trigger: TTTGATGATCATTTTTGCAATTGATGGAGAAGTCCAGAGGGCTTGCTGGTGCTCGAAGGCCAGAGCGGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS CCA 72 bp CATAAAACACATTTCCAAGTGGTTCATGAGATGCCATaGCCATCCAAAAGAGGGAGGCAATGCGCCGGAGCT +
Preference number: 6 (lower is better)
Translates to: HKTHFQVVHEMP*PSKRGRQCAGA
Trigger: AGCTCCGGCGCATTGCCTCCCTCTTTTGGATGGCCATGGCATCTCATGAACCACTTGGAAATGTGTTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS CCA 72 bp ATCACCAGTAGTGACGGGGTCTCAGTTCCTAGGACATaGGTGATACCAGGCTTACTCTACATCAGTCAGAAC +
Preference number: 6 (lower is better)
Translates to: ITSSDGVSVPRT*VIPGLLYISQN
Trigger: GTTCTGACTGATGTAGAGTAAGCCTGGTATCACCCATGTCCTAGGAACTGAGACCCCGTCACTACTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582491.5
ENST00000632544.1
CDS CCA 72 bp ATCTGGCAAGGTGAAGAGGGCCTCAGAAACCACTGCTaGCGTGTGCTTTTCTGCTGGTTAAACATTCCAAGA +
Preference number: 6 (lower is better)
Translates to: IWQGEEGLRNHC*RVLFCWLNIPR
Trigger: TCTTGGAATGTTTAACCAGCAGAAAAGCACACGCCAGCAGTGGTTTCTGAGGCCCTCTTCACCTTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp TTTACTCTTTTCAGTGCCTGTCTCAGCAGCAAGCACTaGTCAGCCAGATCTTGGAGGCCAAAGCCTGTCTAC +
Preference number: 6 (lower is better)
Translates to: FTLFSACLSSKH*SARSWRPKPVY
Trigger: GTAGACAGGCTTTGGCCTCCAAGATCTGGCTGACAAGTGCTTGCTGCTGAGACAGGCACTGAAAAGAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp GTCCTCAATAGGAAAAGACCTCCTCATTCTAGATCCTaGTATCCAGCGGGCCTTCCAAACCCCAACCCTTCA +
Preference number: 6 (lower is better)
Translates to: VLNRKRPPHSRS*YPAGLPNPNPS
Trigger: TGAAGGGTTGGGGTTTGGAAGGCCCGCTGGATACAAGGATCTAGAATGAGGAGGTCTTTTCCTATTGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 90 bp AGAGCTTTGGTCCTCAATAGGAAAAGACCTCCTCATTCTAGATCCTaGTATCCAGCGGGCCTTCCAAACCCCAACCCTTCACTAAAGCAG +
Preference number: 6 (lower is better)
Translates to: RALVLNRKRPPHSRS*YPAGLPNPNPSLKQ
Trigger: CTGCTTTAGTGAAGGGTTGGGGTTTGGAAGGCCCGCTGGATACAAGGATCTAGAATGAGGAGGTCTTTTCCTATTGAGGACCAAAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp CCTATAGTGCCAAACACGCCCACATCTAGTCTGGCTTaGCTAGACTTGGACATGTTTAATCAAGCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: PIVPNTPTSSLA*LDLDMFNQAAL
Trigger: CAGGGCAGCTTGATTAAACATGTCCAAGTCTAGTCAAGCCAGACTAGATGTGGGCGTGTTTGGCACTATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp AATATCCCCATGTGCCAGGCACTATACCAAGCCTATTaGAAGCCTCTTCTCATTGAACCCTCACCACTGCAT +
Preference number: 6 (lower is better)
Translates to: NIPMCQALYQAY*KPLLIEPSPLH
Trigger: ATGCAGTGGTGAGGGTTCAATGAGAAGAGGCTTGCAATAGGCTTGGTATAGTGCCTGGCACATGGGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp AGATGCAATGGCTGCCTCAGAAGGCACTCCTGTCACTaGAGATACTTGTTTGTGCACAACTTCAGCCACAAT +
Preference number: 6 (lower is better)
Translates to: RCNGCLRRHSCH*RYLFVHNFSHN
Trigger: ATTGTGGCTGAAGTTGTGCACAAACAAGTATCTCCAGTGACAGGAGTGCCTTCTGAGGCAGCCATTGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000455565.5
ENST00000580220.2
ENST00000582491.5
ENST00000583740.5
ENST00000585118.5
ENST00000585122.5
ENST00000591271.5
ENST00000631721.1
ENST00000632092.1
ENST00000632544.1
ENST00000632929.1
ENST00000633571.1
ENST00000633823.1
ENST00000633924.1
CDS CCA 72 bp TCCGTGGTTAAATGTTGGCTTCTCTCTTCCCATCTGTaGCTGTCTGTTACCCCAAGTCAAGGCCTTACATCA +
Preference number: 6 (lower is better)
Translates to: SVVKCWLLSSHL*LSVTPSQGLTS
Trigger: TGATGTAAGGCCTTGACTTGGGGTAACAGACAGCCACAGATGGGAAGAGAGAAGCCAACATTTAACCACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 72 bp TTATCTCCAACACTACATCTAACTGGTGGGGACCTGTaGCTATCACCTGTGCAGCTAGACCAGAAGATAGAC +
Preference number: 6 (lower is better)
Translates to: LSPTLHLTGGDL*LSPVQLDQKID
Trigger: GTCTATCTTCTGGTCTAGCTGCACAGGTGATAGCCACAGGTCCCCACCAGTTAGATGTAGTGTTGGAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 90 bp TGTCAGTACAAACCAAGGGAGAATGTCATAAACCATAAAGCAAATTaGGGGCATCCGAGGGCCCTGACCTGCCTGATTATCTCCAACACT +
Preference number: 6 (lower is better)
Translates to: CQYKPRENVINHKAN*GHPRALTCLIISNT
Trigger: AGTGTTGGAGATAATCAGGCAGGTCAGGGCCCTCGGATGCCCCAAATTTGCTTTATGGTTTATGACATTCTCCCTTGGTTTGTACTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp ACACCTGTGGGGCACTTTTTAAATGCCAGGCACTGCTaGCATCTCCTTATAAGCATGAACTTGGTGAACTCT +
Preference number: 6 (lower is better)
Translates to: TPVGHFLNARHC*HLLISMNLVNS
Trigger: AGAGTTCACCAAGTTCATGCTTATAAGGAGATGGCAGCAGTGCCTGGCATTTAAAAAGTGCCCCACAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp CCACCTAGTGGCAATGTGCAGCAGCATGCTAATTACTaGCCAAATGCAGGAGCTTGTCTAATAGCTACTACA +
Preference number: 6 (lower is better)
Translates to: PPSGNVQQHANY*PNAGACLIATT
Trigger: TGTAGTAGCTATTAGACAAGCTCCTGCATTTGGCCAGTAATTAGCATGCTGCTGCACATTGCCACTAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS CCA 72 bp AGATACTTGTTTGTGCACAACTTCAGCCACAATTCATaGGGACCCTGCAGAAGAGACCCTCAGAATGTGATC +
Preference number: 6 (lower is better)
Translates to: RYLFVHNFSHNS*GPCRRDPQNVI
Trigger: GATCACATTCTGAGGGTCTCTTCTGCAGGGTCCCCATGAATTGTGGCTGAAGTTGTGCACAAACAAGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580220.2
ENST00000633924.1
CDS CCA 72 bp AGCACAGAGGCAACATTCAGGACTGATGAGGAAATTTaGCTCTTGGGAAATGGTCAGAACAGCTCATTCTGC +
Preference number: 6 (lower is better)
Translates to: STEATFRTDEEI*LLGNGQNSSFC
Trigger: GCAGAATGAGCTGTTCTGACCATTTCCCAAGAGCCAAATTTCCTCATCAGTCCTGAATGTTGCCTCTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CAA 72 bp AAACCAAGGGAGAATGTCATAAACCATAAAGCAAATTaGGGGCATCCGAGGGCCCTGACCTGCCTGATTATC +
Preference number: 6 (lower is better)
Translates to: KPRENVINHKAN*GHPRALTCLII
Trigger: GATAATCAGGCAGGTCAGGGCCCTCGGATGCCCCAAATTTGCTTTATGGTTTATGACATTCTCCCTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 90 bp CAATACCAGGTGGGCTGGGAATCTCACATCTCCCAAATTAGCCTCTaGATTCTGTCACAAACTTTCAGAACTCAAAGGCTTGTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: QYQVGWESHISQISL*ILSQTFRTQRLVVL
Trigger: CAGAACCACAAGCCTTTGAGTTCTGAAAGTTTGTGACAGAATCAAGAGGCTAATTTGGGAGATGTGAGATTCCCAGCCCACCTGGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS CAA 90 bp GGAGATGTAGAATCTGGAAGACCAAGTCTGTTGGGGGAAAACACATaGACATCTACTGGCTCCAAAGGAATATGGTTCTGTCCTAGACAG +
Preference number: 6 (lower is better)
Translates to: GDVESGRPSLLGENT*TSTGSKGIWFCPRQ
Trigger: CTGTCTAGGACAGAACCATATTCCTTTGGAGCCAGTAGATGTCAATGTGTTTTCCCCCAACAGACTTGGTCTTCCAGATTCTACATCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp AGGTTTAGAGTTCTCTTAAACAGGAGTGGGCTGCTTTaGGATACTGAGCTCCCGGGCACTGAAAGTATTCAA +
Preference number: 6 (lower is better)
Translates to: RFRVLLNRSGLL*DTELPGTESIQ
Trigger: TTGAATACTTTCAGTGCCCGGGAGCTCAGTATCTCAAAGCAGCCCACTCCTGTTTAAGAGAACTCTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS TCA 72 bp CCAATGTCTGCTCCTGATCTAATAGTCAGCACTATTTaGATATCCCCATGTGCCAGGCACTATACCAAGCCT +
Preference number: 6 (lower is better)
Translates to: PMSAPDLIVSTI*ISPCARHYTKP
Trigger: AGGCTTGGTATAGTGCCTGGCACATGGGGATATTCAAATAGTGCTGACTATTAGATCAGGAGCAGACATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS GCA 72 bp CGCCATGGGCCAGGCTTTCTTTTATTAAAACCGAGATaGTACTCTTCCTCTTCTCAAAGTGCCTACAGAACA +
Preference number: 6 (lower is better)
Translates to: RHGPGFLLLKPR*YSSSSQSAYRT
Trigger: TGTTCTGTAGGCACTTTGAGAAGAGGAAGAGTAGCATCTCGGTTTTAATAAAAGAAAGCCTGGCCCATGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1
CDS CCA 72 bp AATTTACCACTAACTCGAGGGCAATACCAGGTGGGCTaGGAATCTCACATCTCCCAAATTAGCCTCTTGATT +
Preference number: 6 (lower is better)
Translates to: NLPLTRGQYQVG*ESHISQISLLI
Trigger: AATCAAGAGGCTAATTTGGGAGATGTGAGATTCCCAGCCCACCTGGTATTGCCCTCGAGTTAGTGGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS CCA 72 bp AGGCAACATTCAGGACTGATGAGGAAATTTGGCTCTTaGGAAATGGTCAGAACAGCTCATTCTGCTAAGAGC +
Preference number: 6 (lower is better)
Translates to: RQHSGLMRKFGS*EMVRTAHSAKS
Trigger: GCTCTTAGCAGAATGAGCTGTTCTGACCATTTCCCAAGAGCCAAATTTCCTCATCAGTCCTGAATGTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 72 bp GGAATATGGTTCTGTCCTAGACAGAGGAGGCTTTATTaGGAGGCTAATAAGCTTATGCTTAAGGCCCACTAC +
Preference number: 6 (lower is better)
Translates to: GIWFCPRQRRLY*EANKLMLKAHY
Trigger: GTAGTGGGCCTTAAGCATAAGCTTATTAGCCTCCCAATAAAGCCTCCTCTGTCTAGGACAGAACCATATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp CATGAGGGAGATGTAGAATCTGGAAGACCAAGTCTGTaGGGGGAAAACACATTGACATCTACTGGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: HEGDVESGRPSL*GENTLTSTGSK
Trigger: TTTGGAGCCAGTAGATGTCAATGTGTTTTCCCCCAACAGACTTGGTCTTCCAGATTCTACATCTCCCTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 90 bp TTTGCACCTGCAATAAGCAAATACCTTTTCTTTCCTGAGGATCATTaGCTTAAAGCACTGAAGAGTGAGCTGCTAGCTGCAGCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: FAPAISKYLFFPEDH*LKALKSELLAAAVV
Trigger: CACCACTGCTGCAGCTAGCAGCTCACTCTTCAGTGCTTTAAGCAAATGATCCTCAGGAAAGAAAAGGTATTTGCTTATTGCAGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS TCA 72 bp TGGGCTGGGAATCTCACATCTCCCAAATTAGCCTCTTaGTTCTGTCACAAACTTTCAGAACTCAAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: WAGNLTSPKLAS*FCHKLSELKGL
Trigger: CAAGCCTTTGAGTTCTGAAAGTTTGTGACAGAATCAAGAGGCTAATTTGGGAGATGTGAGATTCCCAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS TCA 72 bp CGTACAGGCACCACCTCTTCTCAACAACCAACCTCCTaGAATGATTTGGGCAGATATTATCATGCCCATTTT +
Preference number: 6 (lower is better)
Translates to: RTGTTSSQQPTS*NDLGRYYHAHF
Trigger: AAAATGGGCATGATAATATCTGCCCAAATCATTTCAGGAGGTTGGTTGTTGAGAAGAGGTGGTGCCTGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp AATCTGGAAGACCAAGTCTGTTGGGGGAAAACACATTaGCATCTACTGGCTCCAAAGGAATATGGTTCTGTC +
Preference number: 6 (lower is better)
Translates to: NLEDQVCWGKTH*HLLAPKEYGSV
Trigger: GACAGAACCATATTCCTTTGGAGCCAGTAGATGTCAATGTGTTTTCCCCCAACAGACTTGGTCTTCCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp TTTGCTTCTGGTTCCAAAGAGAAATACATGCTTCTTTaGGGTGCTGGTCTCTTTTGGGGTCTTCAGTCAGAT +
Preference number: 6 (lower is better)
Translates to: FASGSKEKYMLL*GAGLFWGLQSD
Trigger: ATCTGACTGAAGACCCCAAAAGAGACCAGCACCCCAAAGAAGCATGTATTTCTCTTTGGAACCAGAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CCA 72 bp GAAAACACATTGACATCTACTGGCTCCAAAGGAATATaGTTCTGTCCTAGACAGAGGAGGCTTTATTGGGAG +
Preference number: 6 (lower is better)
Translates to: ENTLTSTGSKGI*FCPRQRRLYWE
Trigger: CTCCCAATAAAGCCTCCTCTGTCTAGGACAGAACCATATTCCTTTGGAGCCAGTAGATGTCAATGTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp GAATCTGGAAGACCAAGTCTGTTGGGGGAAAACACATaGACATCTACTGGCTCCAAAGGAATATGGTTCTGT +
Preference number: 6 (lower is better)
Translates to: ESGRPSLLGENT*TSTGSKGIWFC
Trigger: ACAGAACCATATTCCTTTGGAGCCAGTAGATGTCAATGTGTTTTCCCCCAACAGACTTGGTCTTCCAGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS TCA 72 bp AGGCACCACCTCTTCTCAACAACCAACCTCCTGAAATaGTTTGGGCAGATATTATCATGCCCATTTTACAGA +
Preference number: 6 (lower is better)
Translates to: RHHLFSTTNLLK*FGQILSCPFYR
Trigger: TCTGTAAAATGGGCATGATAATATCTGCCCAAATCATTTCAGGAGGTTGGTTGTTGAGAAGAGGTGGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp CCACCTCTTCTCAACAACCAACCTCCTGAAATGATTTaGGCAGATATTATCATGCCCATTTTACAGATGACG +
Preference number: 6 (lower is better)
Translates to: PPLLNNQPPEMI*ADIIMPILQMT
Trigger: CGTCATCTGTAAAATGGGCATGATAATATCTGCCCAAATCATTTCAGGAGGTTGGTTGTTGAGAAGAGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp GCTCATCCCATGCATCCCAAGCAAACAGAAGGATGTTaGCTTCTGGTTCCAAAGAGAAATACATGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: AHPMHPKQTEGC*LLVPKRNTCFF
Trigger: AAAGAAGCATGTATTTCTCTTTGGAACCAGAAGCAAACATCCTTCTGTTTGCTTGGGATGCATGGGATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS CAA 72 bp CCCAGAATTAGATGGGCTCTCAAAAGAGTATCTGGTTaGTCCCTCAAGCAGGTATTAAAGATCCATCAACTC +
Preference number: 6 (lower is better)
Translates to: PRIRWALKRVSG*SLKQVLKIHQL
Trigger: GAGTTGATGGATCTTTAATACCTGCTTGAGGGACAAACCAGATACTCTTTTGAGAGCCCATCTAATTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CCA 72 bp ACACTCAGAGATTGTAGACAGAACCTAGAATTGGCCTaGAGTTTTCTAGATGCTGTAGTTCAATCAGCTCAA +
Preference number: 6 (lower is better)
Translates to: TLRDCRQNLELA*SFLDAVVQSAQ
Trigger: TTGAGCTGATTGAACTACAGCATCTAGAAAACTCCAGGCCAATTCTAGGTTCTGTCTACAATCTCTGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp GCAATAAGCAAATACCTTTTCTTTCCTGAGGATCATTaGCTTAAAGCACTGAAGAGTGAGCTGCTAGCTGCA +
Preference number: 6 (lower is better)
Translates to: AISKYLFFPEDH*LKALKSELLAA
Trigger: TGCAGCTAGCAGCTCACTCTTCAGTGCTTTAAGCAAATGATCCTCAGGAAAGAAAAGGTATTTGCTTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS CAA 72 bp AGAAGTTTGGCTGTTTTTATTCCTTCCCAGCCAGCATaGTCAGTACAAACCAAGGGAGAATGTCATAAACCA +
Preference number: 6 (lower is better)
Translates to: RSLAVFIPSQPA*SVQTKGECHKP
Trigger: TGGTTTATGACATTCTCCCTTGGTTTGTACTGACAATGCTGGCTGGGAAGGAATAAAAACAGCCAAACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 90 bp TTAAGTGTCGCTGATAAAGAAGGAAACAATCCAATCAGGTTTACATaGGCGGTTCAATTAGGCACATATGAAGTAGTCACTCCAAAGCGG +
Preference number: 6 (lower is better)
Translates to: LSVADKEGNNPIRFT*AVQLGTYEVVTPKR
Trigger: CCGCTTTGGAGTGACTACTTCATATGTGCCTAATTGAACCGCCAATGTAAACCTGATTGGATTGTTTCCTTCTTTATCAGCGACACTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS TCA 72 bp AGCATAAGGAAAAGGCTGGATACCTTCCTAGTGTTATaGAGTATTGATATGCCAGTGAAAAAGCTCACGGAT +
Preference number: 6 (lower is better)
Translates to: SIRKRLDTFLVL*SIDMPVKKLTD
Trigger: ATCCGTGAGCTTTTTCACTGGCATATCAATACTTCATAACACTAGGAAGGTATCCAGCCTTTTCCTTATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455565.5
ENST00000631721.1
CDS TCA 72 bp AATCAGGTTTACATTGGCGGTTCAATTAGGCACATATaGAGTAGTCACTCCAAAGCGGTTCACAGCAAATTT +
Preference number: 6 (lower is better)
Translates to: NQVYIGGSIRHI*SSHSKAVHSKF
Trigger: AAATTTGCTGTGAACCGCTTTGGAGTGACTACTTCATATGTGCCTAATTGAACCGCCAATGTAAACCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS TCA 72 bp GAGTTTACGAGCCCATTGTGCACCCAATACAATGAATaGAAAAAGGCCCACGCTAATTTCATAGTGATGTAT +
Preference number: 6 (lower is better)
Translates to: EFTSPLCTQYNE*KKAHANFIVMY
Trigger: ATACATCACTATGAAATTAGCGTGGGCCTTTTTTCATTCATTGTATTGGGTGCACAATGGGCTCGTAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591271.5
CDS CAA 72 bp GCTGATAAAGAAGGAAACAATCCAATCAGGTTTACATaGGCGGTTCAATTAGGCACATATGAAGTAGTCACT +
Preference number: 6 (lower is better)
Translates to: ADKEGNNPIRFT*AVQLGTYEVVT
Trigger: AGTGACTACTTCATATGTGCCTAATTGAACCGCCAATGTAAACCTGATTGGATTGTTTCCTTCTTTATCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589868.1
ENST00000591271.5
ENST00000633111.1
CDS GCA 72 bp AACAATTTGATGGTTCCTAGTAAATCTATACAGTTCTaGAACCATGACTACAGTCCAGTTGCAGAAACTTTG +
Preference number: 6 (lower is better)
Translates to: NNLMVPSKSIQF*NHDYSPVAETL
Trigger: CAAAGTTTCTGCAACTGGACTGTAGTCATGGTTGCAGAACTGTATAGATTTACTAGGAACCATCAAATTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578000.5
ENST00000580655.1
ENST00000633237.1
ENST00000634069.1