Pregenerated sensors for LINC02208 (Homo sapiens)
Ensembl gene IDs: ENSG00000250891Ensembl transcript IDs: ENST00000506769.1, ENST00000515704.1, ENST00000653787.1, ENST00000654806.1, ENST00000655008.1, ENST00000659234.1, ENST00000659881.1, ENST00000660173.1, ENST00000660915.1, ENST00000661194.1, ENST00000661749.1, ENST00000662796.1, ENST00000665746.1, ENST00000666092.1, ENST00000667817.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CATTCCTTTTGGTGTCCTGGCAAAACCACCAGCCTGCAGGTGCCTTaGCTGTGGCTCCTGGAATTCTGCCTGATCTCCATCTTTGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: HSFWCPGKTTSLQVP*LWLLEFCLISIFAS Trigger: GCTTGCAAAGATGGAGATCAGGCAGAATTCCAGGAGCCACAGTCAAGGCACCTGCAGGCTGGTGGTTTTGCCAGGACACCAAAAGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666092.1 |
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| CDS GCA 90 bp | GGCTTAGGACAAGCAGTGCCTTGGGCATGCAAATGCAGCAGAGCATaGTGTTTCCAGGCTAGGGCAGGATTGAGATGTACTCTTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: GLGQAVPWACKCSRA*CFQARAGLRCTLAP Trigger: TGGTGCAAGAGTACATCTCAATCCTGCCCTAGCCTGGAAACAGCATGCTCTGCTGCATTTGCATGCCCAAGGCACTGCTTGTCCTAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS GCA 90 bp | AGAGAGTTTCTAGGATGGGGCTTAGGACAAGCAGTGCCTTGGGCATaGAAATGCAGCAGAGCATGCTGTTTCCAGGCTAGGGCAGGATTG | + |
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Preference number: 5 (lower is better) Translates to: REFLGWGLGQAVPWA*KCSRACCFQARAGL Trigger: CAATCCTGCCCTAGCCTGGAAACAGCATGCTCTGCTGCATTTGCATGCCCAAGGCACTGCTTGTCCTAAGCCCCATCCTAGAAACTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS TCA 90 bp | CAAAGAGGCCAGTTTGCAGCTGCCCCAACACAAAAGACCTTGACCTaGAGCAGCCACTTAAGAGTGATGCTCATCTGGGTGTACTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: QRGQFAAAPTQKTLT*SSHLRVMLIWVYLP Trigger: GGGCAAGTACACCCAGATGAGCATCACTCTTAAGTGGCTGCTTCAGGTCAAGGTCTTTTGTGTTGGGGCAGCTGCAAACTGGCCTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS GCA 90 bp | TTTCTAGGATGGGGCTTAGGACAAGCAGTGCCTTGGGCATGCAAATaGAGCAGAGCATGCTGTTTCCAGGCTAGGGCAGGATTGAGATGT | + |
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Preference number: 5 (lower is better) Translates to: FLGWGLGQAVPWACK*SRACCFQARAGLRC Trigger: ACATCTCAATCCTGCCCTAGCCTGGAAACAGCATGCTCTGCTGCATTTGCATGCCCAAGGCACTGCTTGTCCTAAGCCCCATCCTAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS CCA 90 bp | AGCTATAGAGAGTTTCTAGGATGGGGCTTAGGACAAGCAGTGCCTTaGGCATGCAAATGCAGCAGAGCATGCTGTTTCCAGGCTAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SYREFLGWGLGQAVP*ACKCSRACCFQARA Trigger: TGCCCTAGCCTGGAAACAGCATGCTCTGCTGCATTTGCATGCCCAAGGCACTGCTTGTCCTAAGCCCCATCCTAGAAACTCTCTATAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS CCA 90 bp | AAAGGAAAAGTGATATTCACTGAAGAGCAACTCAAGGCATATGTGTaGACACAGGGAGAGGCAACCCCTCCCAATCGGGTGGGTGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: KGKVIFTEEQLKAYV*TQGEATPPNRVGVG Trigger: ACCCACACCCACCCGATTGGGAGGGGTTGCCTCTCCCTGTGTCCACACATATGCCTTGAGTTGCTCTTCAGTGAATATCACTTTTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661194.1 ENST00000667817.1 |
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| CDS TCA 90 bp | TGTGATGATCCTGGTAGATCTAAAAGTCCAAGGACTGCACAAGCATaGATCGGATGGCCAGTCTTCCTGGGCAGCTACCATAGCCATAGT | + |
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Preference number: 5 (lower is better) Translates to: CDDPGRSKSPRTAQA*IGWPVFLGSYHSHS Trigger: ACTATGGCTATGGTAGCTGCCCAGGAAGACTGGCCATCCGATTCATGCTTGTGCAGTCCTTGGACTTTTAGATCTACCAGGATCATCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667817.1 |
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| CDS CCA 90 bp | CAAGAGCGCTGTCAGAGAGTTTTGTTTTCCAGAGCTCTTCCCACCTaGACCTTCTGTCCTTGTTGGAACAGATTCTCTAACTCTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: QERCQRVLFSRALPT*TFCPCWNRFSNSPW Trigger: CCATGGAGAGTTAGAGAATCTGTTCCAACAAGGACAGAAGGTCCAGGTGGGAAGAGCTCTGGAAAACAAAACTCTCTGACAGCGCTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000506769.1 ENST00000659234.1 ENST00000659881.1 |
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| CDS CCA 90 bp | TTGGAGAGGACACCGTGGCTCAGCTCTTCTCCATTCCATGATGTCTaGGGCTTGTACAAGGAGACTCAAACAGCTGTAGCTAGAATAACA | + |
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Preference number: 5 (lower is better) Translates to: LERTPWLSSSPFHDV*GLYKETQTAVARIT Trigger: TGTTATTCTAGCTACAGCTGTTTGAGTCTCCTTGTACAAGCCCCAGACATCATGGAATGGAGAAGAGCTGAGCCACGGTGTCCTCTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000515704.1 ENST00000655008.1 ENST00000661194.1 ENST00000667817.1 |
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| CDS TCA 90 bp | TCCTTCTTAGACAGGGTAACTGTTGTAAGCTACGCAGGCCAGTACTaGAGGGTCAGCATCAAATCACACTTGCTGTTAGTCCCACTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SFLDRVTVVSYAGQY*RVSIKSHLLLVPLQ Trigger: TTGGAGTGGGACTAACAGCAAGTGTGATTTGATGCTGACCCTTCAGTACTGGCCTGCGTAGCTTACAACAGTTACCCTGTCTAAGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506769.1 |
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| CDS GCA 90 bp | GATCCCATACCCCTGACTGAATCTCTAGGTAAGCAATATGTCCTATaGCTTGATTCCTCTAGACTAGAAGCCCTGTCCTCTTCTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: DPIPLTESLGKQYVL*LDSSRLEALSSSCQ Trigger: CTGGCAAGAAGAGGACAGGGCTTCTAGTCTAGAGGAATCAAGGCATAGGACATATTGCTTACCTAGAGATTCAGTCAGGGGTATGGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506769.1 |
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| CDS CCA 90 bp | ACCTGGACCTTCTGTCCTTGTTGGAACAGATTCTCTAACTCTCCATaGGATAAGGCAGGTCCTTATTCCAACCAGTCACAGCTGATTGCA | + |
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Preference number: 5 (lower is better) Translates to: TWTFCPCWNRFSNSP*DKAGPYSNQSQLIA Trigger: TGCAATCAGCTGTGACTGGTTGGAATAAGGACCTGCCTTATCCCATGGAGAGTTAGAGAATCTGTTCCAACAAGGACAGAAGGTCCAGGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506769.1 ENST00000659234.1 ENST00000659881.1 |
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| CDS CCA 90 bp | TTTCAAGACAACTTCTTCATACACATATCTGGTAGCCTCTCCAGGTaGCCTGGACATCCTAAGTGCATGGTGGCCTCAGATAGTTGGACT | + |
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Preference number: 5 (lower is better) Translates to: FQDNFFIHISGSLSR*PGHPKCMVASDSWT Trigger: AGTCCAACTATCTGAGGCCACCATGCACTTAGGATGTCCAGGCCACCTGGAGAGGCTACCAGATATGTGTATGAAGAAGTTGTCTTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000515704.1 ENST00000655008.1 ENST00000661194.1 ENST00000667817.1 |
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| CDS TCA 90 bp | AAGAAGATAACTGGTAGATCTAAAAGTCCAAGGACTGCACAAGCATaGATCGGATGGCCAGTCTTCCTGGGCAGCTACCATAGCCATAGT | + |
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Preference number: 5 (lower is better) Translates to: KKITGRSKSPRTAQA*IGWPVFLGSYHSHS Trigger: ACTATGGCTATGGTAGCTGCCCAGGAAGACTGGCCATCCGATTCATGCTTGTGCAGTCCTTGGACTTTTAGATCTACCAGTTATCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515704.1 |
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| CDS TCA 90 bp | ATCCCCCATTACACAGCTTTACAGAGATTGAACATCACTAGAGGTTaGAAGCTCCTTGGACTTAGAGGGTCTTGGGATAGCCAAAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: IPHYTALQRLNITRG*KLLGLRGSWDSQRG Trigger: GCCTCTTTGGCTATCCCAAGACCCTCTAAGTCCAAGGAGCTTTCAACCTCTAGTGATGTTCAATCTCTGTAAAGCTGTGTAATGGGGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS TCA 90 bp | CTAAGTGCATGGTGGCCTCAGATAGTTGGACTTTGTACACAGGACTaGGAACTCCAAAATGTGATGATCCTGCAACCAGGACTCTCACTT | + |
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Preference number: 5 (lower is better) Translates to: LSAWWPQIVGLCTQD*ELQNVMILQPGLSL Trigger: AAGTGAGAGTCCTGGTTGCAGGATCATCACATTTTGGAGTTCTCAGTCCTGTGTACAAAGTCCAACTATCTGAGGCCACCATGCACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655008.1 ENST00000661194.1 |
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| CDS GCA 90 bp | CACATTGAGAAGCACAGTCTGGATAAGGAGCTAGGATACTGGGCGTaGTCTGATGGACATTCTTTATTGGCAAGGACACAGAATGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: HIEKHSLDKELGYWA*SDGHSLLARTQNGN Trigger: ATTCCCATTCTGTGTCCTTGCCAATAAAGAATGTCCATCAGAGCACGCCCAGTATCCTAGCTCCTTATCCAGACTGTGCTTCTCAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000506769.1 ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 ENST00000659881.1 ENST00000660173.1 ENST00000661749.1 ENST00000662796.1 ENST00000665746.1 |
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| CDS GCA 90 bp | CTTACTGAGAAGCACAGTCTGGATAAGGAGCTAGGATACTGGGCGTaGTCTGATGGACATTCTTTATTGGCAAGGACACAGAATGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LTEKHSLDKELGYWA*SDGHSLLARTQNGN Trigger: ATTCCCATTCTGTGTCCTTGCCAATAAAGAATGTCCATCAGAGCACGCCCAGTATCCTAGCTCCTTATCCAGACTGTGCTTCTCAGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660915.1 |
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| CDS CCA 90 bp | CCTTGTCACATTGAGAAGCACAGTCTGGATAAGGAGCTAGGATACTaGGCGTGCTCTGATGGACATTCTTTATTGGCAAGGACACAGAAT | + |
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Preference number: 5 (lower is better) Translates to: PCHIEKHSLDKELGY*ACSDGHSLLARTQN Trigger: ATTCTGTGTCCTTGCCAATAAAGAATGTCCATCAGAGCACGCCCAGTATCCTAGCTCCTTATCCAGACTGTGCTTCTCAATGTGACAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000506769.1 ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 ENST00000659881.1 ENST00000660173.1 ENST00000661749.1 ENST00000662796.1 ENST00000665746.1 |
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| CDS CCA 90 bp | CCCCAGACACTTGTGCTCTACTCTGCCCTGGATTCTGAAGAATGTTaGTGTGAGCATAGAAACTGCTGCAATGACAATATCACCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: PQTLVLYSALDSEEC*CEHRNCCNDNITMK Trigger: TTTCATGGTGATATTGTCATTGCAGCAGTTTCTATGCTCACACCAACATTCTTCAGAATCCAGGGCAGAGTAGAGCACAAGTGTCTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660173.1 |
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| CDS CCA 90 bp | TGTGTACTTACTGAGAAGCACAGTCTGGATAAGGAGCTAGGATACTaGGCGTGCTCTGATGGACATTCTTTATTGGCAAGGACACAGAAT | + |
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Preference number: 5 (lower is better) Translates to: CVLTEKHSLDKELGY*ACSDGHSLLARTQN Trigger: ATTCTGTGTCCTTGCCAATAAAGAATGTCCATCAGAGCACGCCCAGTATCCTAGCTCCTTATCCAGACTGTGCTTCTCAGTAAGTACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660915.1 |
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| CDS TCA 90 bp | TTGAAAAGCAGTAGTAAAGGAGTCCCTGGAGTATTTCTGAGCTCTTaGAACAAGCTTCATGGCAACAGCTTGATTCTGCTTCGTGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: LKSSSKGVPGVFLSS*NKLHGNSLILLRAS Trigger: CGAAGCACGAAGCAGAATCAAGCTGTTGCCATGAAGCTTGTTTCAAGAGCTCAGAAATACTCCAGGGACTCCTTTACTACTGCTTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000506769.1 ENST00000653787.1 ENST00000654806.1 ENST00000660173.1 ENST00000660915.1 ENST00000661749.1 ENST00000662796.1 ENST00000665746.1 |
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| CDS TCA 90 bp | CTAAGTGCATGGTGGCCTCAGATAGTTGGACTTTGTACACAGGACTaGGAACTCCAAAATGTGATGATCCATCATATTGAGACCATCTGC | + |
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Preference number: 5 (lower is better) Translates to: LSAWWPQIVGLCTQD*ELQNVMIHHIETIC Trigger: GCAGATGGTCTCAATATGATGGATCATCACATTTTGGAGTTCTCAGTCCTGTGTACAAAGTCCAACTATCTGAGGCCACCATGCACTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515704.1 |
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| CDS TCA 90 bp | CTAAGTGCATGGTGGCCTCAGATAGTTGGACTTTGTACACAGGACTaGGAACTCCAAAATGTGATGATCCTGGTAGATCTAAAAGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LSAWWPQIVGLCTQD*ELQNVMILVDLKVQ Trigger: TTGGACTTTTAGATCTACCAGGATCATCACATTTTGGAGTTCTCAGTCCTGTGTACAAAGTCCAACTATCTGAGGCCACCATGCACTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667817.1 |
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| CDS GCA 90 bp | ATGGCTTGCTTCCTTTTCCTATCAGTGCACAGAAATAATCTTGCTTaGTGGGGTCATGTTGTTGTAGCACACCTTAGTCATAGGAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: MACFLFLSVHRNNLA*WGHVVVAHLSHRKV Trigger: AACCTTCCTATGACTAAGGTGTGCTACAACAACATGACCCCAGCAAGCAAGATTATTTCTGTGCACTGATAGGAAAAGGAAGCAAGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653787.1 |
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| CDS GCA 90 bp | TCAACATCAATCTTGCTTTTCCAGCTTCAACAGGCACTCATGGCTTaGTTCCTTTTCCTATCAGTGCACAGAAATAATCTTGCTTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: STSILLFQLQQALMA*FLFLSVHRNNLACW Trigger: CCAGCAAGCAAGATTATTTCTGTGCACTGATAGGAAAAGGAAGCAAGCCATGAGTGCCTGTTGAAGCTGGAAAAGCAAGATTGATGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS CCA 90 bp | GCTTGCTTCCTTTTCCTATCAGTGCACAGAAATAATCTTGCTTGCTaGGGTCATGTTGTTGTAGCACACCTTAGTCATAGGAAGGTTATC | + |
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Preference number: 5 (lower is better) Translates to: ACFLFLSVHRNNLAC*GHVVVAHLSHRKVI Trigger: GATAACCTTCCTATGACTAAGGTGTGCTACAACAACATGACCCCAGCAAGCAAGATTATTTCTGTGCACTGATAGGAAAAGGAAGCAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653787.1 |
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| CDS CCA 90 bp | TTTACAGAAGGCGTACACATTCCTATTTATAGCTGGCTTAGGCTGTaGTCAAAAGTGATGTGCCTATTCTCACATTCACTGCTACAGCAG | + |
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Preference number: 5 (lower is better) Translates to: FTEGVHIPIYSWLRL*SKVMCLFSHSLLQQ Trigger: CTGCTGTAGCAGTGAATGTGAGAATAGGCACATCACTTTTGACCACAGCCTAAGCCAGCTATAAATAGGAATGTGTACGCCTTCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660173.1 |
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| CDS CCA 90 bp | ATATACTCAGGTTGCATAAGAACTAAGTTTGATGATCATTTCTACTaGATTTTACTTGGGGCCATGCCTGAGGCTTGGGCTCTACACAGG | + |
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Preference number: 5 (lower is better) Translates to: IYSGCIRTKFDDHFY*ILLGAMPEAWALHR Trigger: CCTGTGTAGAGCCCAAGCCTCAGGCATGGCCCCAAGTAAAATCCAGTAGAAATGATCATCAAACTTAGTTCTTATGCAACCTGAGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666092.1 |
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| CDS TCA 90 bp | AATGGAAGGGGATCATCAGAAAGGCCTTTATCCTCATCGTTCCACTaGATAGGCTTAGTCATAGGAAGGTTATCAGAAGCAAATAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: NGRGSSERPLSSSFH*IGLVIGRLSEANRV Trigger: AACCCTATTTGCTTCTGATAACCTTCCTATGACTAAGCCTATTCAGTGGAACGATGAGGATAAAGGCCTTTCTGATGATCCCCTTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506769.1 |
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| CDS CCA 90 bp | GTCATCCCTTTAAAAAGAACAACCAATTCACATAGAGTGACCATATaGCCTGGTTTATCTAGGACACTCACATTTGCTCCTGTTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: VIPLKRTTNSHRVTI*PGLSRTLTFAPVAP Trigger: TGGAGCAACAGGAGCAAATGTGAGTGTCCTAGATAAACCAGGCCATATGGTCACTCTATGTGAATTGGTTGTTCTTTTTAAAGGGATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506769.1 |
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| CDS CCA 90 bp | TGGGGCTTGTACAAGGAGACTCAAACAGCTGTAGCTAGAATAACATaGGCTGGAAGATCCACTTTCAAGACAACTTCTTCATACACATAT | + |
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Preference number: 5 (lower is better) Translates to: WGLYKETQTAVARIT*AGRSTFKTTSSYTY Trigger: ATATGTGTATGAAGAAGTTGTCTTGAAAGTGGATCTTCCAGCCCATGTTATTCTAGCTACAGCTGTTTGAGTCTCCTTGTACAAGCCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000515704.1 ENST00000655008.1 ENST00000661194.1 ENST00000667817.1 |
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| CDS CCA 90 bp | AAGCCTCAACATCAATCTTGCTTTTCCAGCTTCAACAGGCACTCATaGCTTGCTTCCTTTTCCTATCAGTGCACAGAAATAATCTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: KPQHQSCFSSFNRHS*LASFSYQCTEIILL Trigger: AAGCAAGATTATTTCTGTGCACTGATAGGAAAAGGAAGCAAGCCATGAGTGCCTGTTGAAGCTGGAAAAGCAAGATTGATGTTGAGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS CCA 90 bp | TTCCTTTCATCTTCCTACATTTGCTCCTGTTGCTCCAGGGACTTGTaGTCTCCTAATCTTAGACCATTAAATGGAAGCTGTATTAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: FLSSSYICSCCSRDL*SPNLRPLNGSCIKN Trigger: ATTCTTAATACAGCTTCCATTTAATGGTCTAAGATTAGGAGACCACAAGTCCCTGGAGCAACAGGAGCAAATGTAGGAAGATGAAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666092.1 |
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| CDS GCA 72 bp | CTAGGATGGGGCTTAGGACAAGCAGTGCCTTGGGCATaGAAATGCAGCAGAGCATGCTGTTTCCAGGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: LGWGLGQAVPWA*KCSRACCFQAR Trigger: CCTAGCCTGGAAACAGCATGCTCTGCTGCATTTGCATGCCCAAGGCACTGCTTGTCCTAAGCCCCATCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS TCA 72 bp | GGAGAGGACACCGTGGCTCAGCTCTTCTCCATTCCATaGTGTCTGGGGCTTGTACAAGGAGACTCAAACAGC | + |
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Preference number: 6 (lower is better) Translates to: GEDTVAQLFSIP*CLGLVQGDSNS Trigger: GCTGTTTGAGTCTCCTTGTACAAGCCCCAGACATCATGGAATGGAGAAGAGCTGAGCCACGGTGTCCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000515704.1 ENST00000655008.1 ENST00000661194.1 ENST00000667817.1 |
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| CDS GCA 72 bp | ATCATTCCTTTTGGTGTCCTGGCAAAACCACCAGCCTaGAGGTGCCTTGACTGTGGCTCCTGGAATTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: IIPFGVLAKPPA*RCLDCGSWNSA Trigger: GGCAGAATTCCAGGAGCCACAGTCAAGGCACCTGCAGGCTGGTGGTTTTGCCAGGACACCAAAAGGAATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666092.1 |
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| CDS CCA 72 bp | GTAGCCTCTCCAGGTGGCCTGGACATCCTAAGTGCATaGTGGCCTCAGATAGTTGGACTTTGTACACAGGAC | + |
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Preference number: 6 (lower is better) Translates to: VASPGGLDILSA*WPQIVGLCTQD Trigger: GTCCTGTGTACAAAGTCCAACTATCTGAGGCCACCATGCACTTAGGATGTCCAGGCCACCTGGAGAGGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000515704.1 ENST00000655008.1 ENST00000661194.1 ENST00000667817.1 |
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| CDS CCA 72 bp | CACAGGGAGAGGCAACCCCTCCCAATCGGGTGGGTGTaGGTGATAGGTCATGTGTGTATAACCTCAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: HRERQPLPIGWV*VIGHVCITSDL Trigger: AAGATCTGAGGTTATACACACATGACCTATCACCCACACCCACCCGATTGGGAGGGGTTGCCTCTCCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661194.1 ENST00000667817.1 |
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| CDS GCA 72 bp | CAAGCAGTGCCTTGGGCATGCAAATGCAGCAGAGCATaGTGTTTCCAGGCTAGGGCAGGATTGAGATGTACT | + |
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Preference number: 6 (lower is better) Translates to: QAVPWACKCSRA*CFQARAGLRCT Trigger: AGTACATCTCAATCCTGCCCTAGCCTGGAAACAGCATGCTCTGCTGCATTTGCATGCCCAAGGCACTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS CCA 72 bp | GAGTTTCTAGGATGGGGCTTAGGACAAGCAGTGCCTTaGGCATGCAAATGCAGCAGAGCATGCTGTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: EFLGWGLGQAVP*ACKCSRACCFQ Trigger: CTGGAAACAGCATGCTCTGCTGCATTTGCATGCCCAAGGCACTGCTTGTCCTAAGCCCCATCCTAGAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS CCA 72 bp | GTGATATTCACTGAAGAGCAACTCAAGGCATATGTGTaGACACAGGGAGAGGCAACCCCTCCCAATCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VIFTEEQLKAYV*TQGEATPPNRV Trigger: CACCCGATTGGGAGGGGTTGCCTCTCCCTGTGTCCACACATATGCCTTGAGTTGCTCTTCAGTGAATATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661194.1 ENST00000667817.1 |
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| CDS CAA 90 bp | TCATTCCTTTTGGTGTCCTGGCAAAACCACCAGCCTGCAGGTGCCTaGACTGTGGCTCCTGGAATTCTGCCTGATCTCCATCTTTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SFLLVSWQNHQPAGA*TVAPGILPDLHLCK Trigger: CTTGCAAAGATGGAGATCAGGCAGAATTCCAGGAGCCACAGTCAAGGCACCTGCAGGCTGGTGGTTTTGCCAGGACACCAAAAGGAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666092.1 |
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| CDS TCA 72 bp | CCTGGTAGATCTAAAAGTCCAAGGACTGCACAAGCATaGATCGGATGGCCAGTCTTCCTGGGCAGCTACCAT | + |
|
Preference number: 6 (lower is better) Translates to: PGRSKSPRTAQA*IGWPVFLGSYH Trigger: ATGGTAGCTGCCCAGGAAGACTGGCCATCCGATTCATGCTTGTGCAGTCCTTGGACTTTTAGATCTACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667817.1 |
||
| CDS CCA 72 bp | ACACCGTGGCTCAGCTCTTCTCCATTCCATGATGTCTaGGGCTTGTACAAGGAGACTCAAACAGCTGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TPWLSSSPFHDV*GLYKETQTAVA Trigger: AGCTACAGCTGTTTGAGTCTCCTTGTACAAGCCCCAGACATCATGGAATGGAGAAGAGCTGAGCCACGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000515704.1 ENST00000655008.1 ENST00000661194.1 ENST00000667817.1 |
||
| CDS CAA 72 bp | AGAGTTTCTAGGATGGGGCTTAGGACAAGCAGTGCCTaGGGCATGCAAATGCAGCAGAGCATGCTGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RVSRMGLRTSSA*GMQMQQSMLFP Trigger: TGGAAACAGCATGCTCTGCTGCATTTGCATGCCCAAGGCACTGCTTGTCCTAAGCCCCATCCTAGAAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
||
| CDS CAA 72 bp | AGCAGCCACTTAAGAGTGATGCTCATCTGGGTGTACTaGCCCAATAGGCCTAGAGGCCATTCAGCTAGTACG | + |
|
Preference number: 6 (lower is better) Translates to: SSHLRVMLIWVY*PNRPRGHSAST Trigger: CGTACTAGCTGAATGGCCTCTAGGCCTATTGGGCAAGTACACCCAGATGAGCATCACTCTTAAGTGGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
||
| CDS TCA 72 bp | ACTGGTAGATCTAAAAGTCCAAGGACTGCACAAGCATaGATCGGATGGCCAGTCTTCCTGGGCAGCTACCAT | + |
|
Preference number: 6 (lower is better) Translates to: TGRSKSPRTAQA*IGWPVFLGSYH Trigger: ATGGTAGCTGCCCAGGAAGACTGGCCATCCGATTCATGCTTGTGCAGTCCTTGGACTTTTAGATCTACCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515704.1 |
||
| CDS GCA 72 bp | AAACAAGCTTCATGGCAACAGCTTGATTCTGCTTCGTaGTTCGGTGAAGGATGCTGCAACCAGGACTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: KQASWQQLDSAS*FGEGCCNQDSH Trigger: GTGAGAGTCCTGGTTGCAGCATCCTTCACCGAAGCACGAAGCAGAATCAAGCTGTTGCCATGAAGCTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000506769.1 ENST00000653787.1 ENST00000654806.1 ENST00000660173.1 ENST00000660915.1 ENST00000661749.1 ENST00000662796.1 ENST00000665746.1 |
||
| CDS CCA 72 bp | AACTTCTTCATACACATATCTGGTAGCCTCTCCAGGTaGCCTGGACATCCTAAGTGCATGGTGGCCTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: NFFIHISGSLSR*PGHPKCMVASD Trigger: ATCTGAGGCCACCATGCACTTAGGATGTCCAGGCCACCTGGAGAGGCTACCAGATATGTGTATGAAGAAGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000515704.1 ENST00000655008.1 ENST00000661194.1 ENST00000667817.1 |
||
| CDS TCA 72 bp | GACAGGGTAACTGTTGTAAGCTACGCAGGCCAGTACTaGAGGGTCAGCATCAAATCACACTTGCTGTTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: DRVTVVSYAGQY*RVSIKSHLLLV Trigger: GACTAACAGCAAGTGTGATTTGATGCTGACCCTTCAGTACTGGCCTGCGTAGCTTACAACAGTTACCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS GCA 72 bp | AAGCACAGTCTGGATAAGGAGCTAGGATACTGGGCGTaGTCTGATGGACATTCTTTATTGGCAAGGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: KHSLDKELGYWA*SDGHSLLARTQ Trigger: CTGTGTCCTTGCCAATAAAGAATGTCCATCAGAGCACGCCCAGTATCCTAGCTCCTTATCCAGACTGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000506769.1 ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 ENST00000659881.1 ENST00000660173.1 ENST00000660915.1 ENST00000661749.1 ENST00000662796.1 ENST00000665746.1 |
||
| CDS CCA 72 bp | ACTGAGAAGCACAGTCTGGATAAGGAGCTAGGATACTaGGCGTGCTCTGATGGACATTCTTTATTGGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TEKHSLDKELGY*ACSDGHSLLAR Trigger: CCTTGCCAATAAAGAATGTCCATCAGAGCACGCCCAGTATCCTAGCTCCTTATCCAGACTGTGCTTCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660915.1 |
||
| CDS CAA 90 bp | CCCAGTTCCTGGGGACTCAGTTTTTCTACCATAAATCAGACCTCCTaGCAGCTCTTCAAATGCTTCCTCCCAGACACCTCATTGTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSSWGLSFSTINQTS*QLFKCFLPDTSLFA Trigger: AGCAAACAATGAGGTGTCTGGGAGGAAGCATTTGAAGAGCTGCAAGGAGGTCTGATTTATGGTAGAAAAACTGAGTCCCCAGGAACTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS TCA 72 bp | TGGTGGCCTCAGATAGTTGGACTTTGTACACAGGACTaGGAACTCCAAAATGTGATGATCCTGCAACCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WWPQIVGLCTQD*ELQNVMILQPG Trigger: TCCTGGTTGCAGGATCATCACATTTTGGAGTTCTCAGTCCTGTGTACAAAGTCCAACTATCTGAGGCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655008.1 ENST00000661194.1 |
||
| CDS GCA 72 bp | CCCCTGACTGAATCTCTAGGTAAGCAATATGTCCTATaGCTTGATTCCTCTAGACTAGAAGCCCTGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLTESLGKQYVL*LDSSRLEALSS Trigger: AGAGGACAGGGCTTCTAGTCTAGAGGAATCAAGGCATAGGACATATTGCTTACCTAGAGATTCAGTCAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS GCA 72 bp | CCTTGCACTCCTTCAATCAAGCCTCAACATCAATCTTaGTTTTCCAGCTTCAACAGGCACTCATGGCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PCTPSIKPQHQS*FSSFNRHSWLA Trigger: AGCAAGCCATGAGTGCCTGTTGAAGCTGGAAAAGCAAGATTGATGTTGAGGCTTGATTGAAGGAGTGCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
||
| CDS CCA 72 bp | GCCTGCCCTACCTATGGCTGTGAACTCTGCCTTTCCTaGCCACTTCACTACATACAGCTCATTTTGTATATA | + |
|
Preference number: 6 (lower is better) Translates to: ACPTYGCELCLS*PLHYIQLILYI Trigger: TATATACAAAATGAGCTGTATGTAGTGAAGTGGCCAGGAAAGGCAGAGTTCACAGCCATAGGTAGGGCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS CCA 72 bp | ATTGAGAAGCACAGTCTGGATAAGGAGCTAGGATACTaGGCGTGCTCTGATGGACATTCTTTATTGGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: IEKHSLDKELGY*ACSDGHSLLAR Trigger: CCTTGCCAATAAAGAATGTCCATCAGAGCACGCCCAGTATCCTAGCTCCTTATCCAGACTGTGCTTCTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000506769.1 ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 ENST00000659881.1 ENST00000660173.1 ENST00000661749.1 ENST00000662796.1 ENST00000665746.1 |
||
| CDS CCA 72 bp | ATAAACAGGCAAGGGAAGAAAGACGTTTTCTGCTCCTaGATCCTGAGGGTACACATCAGGGATTCAGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: INRQGKKDVFCS*ILRVHIRDSES Trigger: TGACTCTGAATCCCTGATGTGTACCCTCAGGATCCAGGAGCAGAAAACGTCTTTCTTCCCTTGCCTGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662796.1 |
||
| CDS CAA 72 bp | GAACTAAGTTTGATGATCATTTCTACTGGATTTTACTaGGGGCCATGCCTGAGGCTTGGGCTCTACACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ELSLMIISTGFY*GPCLRLGLYTG Trigger: GCCTGTGTAGAGCCCAAGCCTCAGGCATGGCCCCAAGTAAAATCCAGTAGAAATGATCATCAAACTTAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666092.1 |
||
| CDS CAA 90 bp | CCTCCTTGCAGCTCTTCAAATGCTTCCTCCCAGACACCTCATTGTTaGCTCCACCTCTCTGTCAGTATAATCTTCTTACCTCTTTTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PPCSSSNASSQTPHC*LHLSVSIIFLPLLD Trigger: GTCTAAAAGAGGTAAGAAGATTATACTGACAGAGAGGTGGAGCAAACAATGAGGTGTCTGGGAGGAAGCATTTGAAGAGCTGCAAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS CAA 90 bp | CAGACCTCCTTGCAGCTCTTCAAATGCTTCCTCCCAGACACCTCATaGTTTGCTCCACCTCTCTGTCAGTATAATCTTCTTACCTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: QTSLQLFKCFLPDTS*FAPPLCQYNLLTSF Trigger: AAAAGAGGTAAGAAGATTATACTGACAGAGAGGTGGAGCAAACAATGAGGTGTCTGGGAGGAAGCATTTGAAGAGCTGCAAGGAGGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS CAA 90 bp | GATAAGGAGCTAGGATACTGGGCGTGCTCTGATGGACATTCTTTATaGGCAAGGACACAGAATGGGAATTTTCAGTTTTGTGGTCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: DKELGYWACSDGHSL*ARTQNGNFQFCGHS Trigger: GCTGTGACCACAAAACTGAAAATTCCCATTCTGTGTCCTTGCCAATAAAGAATGTCCATCAGAGCACGCCCAGTATCCTAGCTCCTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000506769.1 ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 ENST00000659881.1 ENST00000660173.1 ENST00000660915.1 ENST00000661749.1 ENST00000662796.1 ENST00000665746.1 |
||
| CDS GCA 72 bp | AACAGGCACTCATGGCTTGCTTCCTTTTCCTATCAGTaGACAGAAATAATCTTGCTTGCTGGGGTCATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: NRHSWLASFSYQ*TEIILLAGVML Trigger: CAACATGACCCCAGCAAGCAAGATTATTTCTGTGCACTGATAGGAAAAGGAAGCAAGCCATGAGTGCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
||
| CDS GCA 72 bp | TGTCGTTTCCTTTCATCTTCCTACATTTGCTCCTGTTaGTCCAGGGACTTGTGGTCTCCTAATCTTAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: CRFLSSSYICSC*SRDLWSPNLRP Trigger: TGGTCTAAGATTAGGAGACCACAAGTCCCTGGAGCAACAGGAGCAAATGTAGGAAGATGAAAGGAAACGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666092.1 |
||
| CDS CCA 72 bp | TGTCAGAGAGTTTTGTTTTCCAGAGCTCTTCCCACCTaGACCTTCTGTCCTTGTTGGAACAGATTCTCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: CQRVLFSRALPT*TFCPCWNRFSN Trigger: GTTAGAGAATCTGTTCCAACAAGGACAGAAGGTCCAGGTGGGAAGAGCTCTGGAAAACAAAACTCTCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000506769.1 ENST00000659234.1 ENST00000659881.1 |
||
| CDS CAA 72 bp | GCCTTTGCTTCAGAGGACATTATTCCTGTGTCAGACTaGCTTCCCGACATGCTGAAAGTCCCTTTGAATTCA | + |
|
Preference number: 6 (lower is better) Translates to: AFASEDIIPVSD*LPDMLKVPLNS Trigger: TGAATTCAAAGGGACTTTCAGCATGTCGGGAAGCAAGTCTGACACAGGAATAATGTCCTCTGAAGCAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS TCA 72 bp | TACACAGCTTTACAGAGATTGAACATCACTAGAGGTTaGAAGCTCCTTGGACTTAGAGGGTCTTGGGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: YTALQRLNITRG*KLLGLRGSWDS Trigger: GCTATCCCAAGACCCTCTAAGTCCAAGGAGCTTTCAACCTCTAGTGATGTTCAATCTCTGTAAAGCTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
||
| CDS TCA 72 bp | TGGTGGCCTCAGATAGTTGGACTTTGTACACAGGACTaGGAACTCCAAAATGTGATGATCCTGGTAGATCTA | + |
|
Preference number: 6 (lower is better) Translates to: WWPQIVGLCTQD*ELQNVMILVDL Trigger: TAGATCTACCAGGATCATCACATTTTGGAGTTCTCAGTCCTGTGTACAAAGTCCAACTATCTGAGGCCACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667817.1 |
||
| CDS CCA 72 bp | TCCTCCCCAGGAATCTCAACCAGAGAAGATATTAAATaGAAGGGGATCATCAGAAAGGCCTTTATCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSPGISTREDIK*KGIIRKAFILI Trigger: GATGAGGATAAAGGCCTTTCTGATGATCCCCTTCCATTTAATATCTTCTCTGGTTGAGATTCCTGGGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS CCA 72 bp | GGCGTACACATTCCTATTTATAGCTGGCTTAGGCTGTaGTCAAAAGTGATGTGCCTATTCTCACATTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: GVHIPIYSWLRL*SKVMCLFSHSL Trigger: CAGTGAATGTGAGAATAGGCACATCACTTTTGACCACAGCCTAAGCCAGCTATAAATAGGAATGTGTACGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660173.1 |
||
| CDS CCA 72 bp | GGTTGCATAAGAACTAAGTTTGATGATCATTTCTACTaGATTTTACTTGGGGCCATGCCTGAGGCTTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCIRTKFDDHFY*ILLGAMPEAWA Trigger: AGCCCAAGCCTCAGGCATGGCCCCAAGTAAAATCCAGTAGAAATGATCATCAAACTTAGTTCTTATGCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666092.1 |
||
| CDS CAA 72 bp | CTTCTTACCTCTTTTAGACAGCCCGATGCCTCTGACTaGCTAAGAAACCACTTGCATCCACTTACCAATTAC | + |
|
Preference number: 6 (lower is better) Translates to: LLTSFRQPDASD*LRNHLHPLTNY Trigger: GTAATTGGTAAGTGGATGCAAGTGGTTTCTTAGCAAGTCAGAGGCATCGGGCTGTCTAAAAGAGGTAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS CAA 72 bp | AGCTCTTCAAATGCTTCCTCCCAGACACCTCATTGTTaGCTCCACCTCTCTGTCAGTATAATCTTCTTACCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSNASSQTPHC*LHLSVSIIFLP Trigger: AGGTAAGAAGATTATACTGACAGAGAGGTGGAGCAAACAATGAGGTGTCTGGGAGGAAGCATTTGAAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS CAA 72 bp | TTGCAGCTCTTCAAATGCTTCCTCCCAGACACCTCATaGTTTGCTCCACCTCTCTGTCAGTATAATCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LQLFKCFLPDTS*FAPPLCQYNLL Trigger: AAGAAGATTATACTGACAGAGAGGTGGAGCAAACAATGAGGTGTCTGGGAGGAAGCATTTGAAGAGCTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS CAA 72 bp | TCATCTTCCTACATTTGCTCCTGTTGCTCCAGGGACTaGTGGTCTCCTAATCTTAGACCATTAAATGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSYICSCCSRD*WSPNLRPLNGS Trigger: GCTTCCATTTAATGGTCTAAGATTAGGAGACCACAAGTCCCTGGAGCAACAGGAGCAAATGTAGGAAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666092.1 |
||
| CDS TCA 72 bp | AGTAGTAAAGGAGTCCCTGGAGTATTTCTGAGCTCTTaGAACAAGCTTCATGGCAACAGCTTGATTCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSKGVPGVFLSS*NKLHGNSLILL Trigger: AAGCAGAATCAAGCTGTTGCCATGAAGCTTGTTTCAAGAGCTCAGAAATACTCCAGGGACTCCTTTACTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000506769.1 ENST00000653787.1 ENST00000654806.1 ENST00000660173.1 ENST00000660915.1 ENST00000661749.1 ENST00000662796.1 ENST00000665746.1 |
||
| CDS TCA 72 bp | GGATCATCAGAAAGGCCTTTATCCTCATCGTTCCACTaGATAGGCTTAGTCATAGGAAGGTTATCAGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSSERPLSSSFH*IGLVIGRLSEA Trigger: TGCTTCTGATAACCTTCCTATGACTAAGCCTATTCAGTGGAACGATGAGGATAAAGGCCTTTCTGATGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS TCA 72 bp | TGGTGGCCTCAGATAGTTGGACTTTGTACACAGGACTaGGAACTCCAAAATGTGATGATCCATCATATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WWPQIVGLCTQD*ELQNVMIHHIE Trigger: CTCAATATGATGGATCATCACATTTTGGAGTTCTCAGTCCTGTGTACAAAGTCCAACTATCTGAGGCCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515704.1 |
||
| CDS CAA 72 bp | CTAGGATACTGGGCGTGCTCTGATGGACATTCTTTATaGGCAAGGACACAGAATGGGAATTTTCAGTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGYWACSDGHSL*ARTQNGNFQFC Trigger: ACAAAACTGAAAATTCCCATTCTGTGTCCTTGCCAATAAAGAATGTCCATCAGAGCACGCCCAGTATCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000506769.1 ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 ENST00000659881.1 ENST00000660173.1 ENST00000660915.1 ENST00000661749.1 ENST00000662796.1 ENST00000665746.1 |
||
| CDS CAA 90 bp | CGTTTCCTTTCATCTTCCTACATTTGCTCCTGTTGCTCCAGGGACTaGTGGTCTCCTAATCTTAGACCATTAAATGGAAGCTGTATTAAG | + |
|
Preference number: 6 (lower is better) Translates to: RFLSSSYICSCCSRD*WSPNLRPLNGSCIK Trigger: CTTAATACAGCTTCCATTTAATGGTCTAAGATTAGGAGACCACAAGTCCCTGGAGCAACAGGAGCAAATGTAGGAAGATGAAAGGAAACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666092.1 |
||
| CDS GCA 72 bp | TTCCTTTTCCTATCAGTGCACAGAAATAATCTTGCTTaGTGGGGTCATGTTGTTGTAGCACACCTTAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FLFLSVHRNNLA*WGHVVVAHLSH Trigger: ATGACTAAGGTGTGCTACAACAACATGACCCCAGCAAGCAAGATTATTTCTGTGCACTGATAGGAAAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653787.1 |
||
| CDS GCA 72 bp | ATCTTGCTTTTCCAGCTTCAACAGGCACTCATGGCTTaGTTCCTTTTCCTATCAGTGCACAGAAATAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILLFQLQQALMA*FLFLSVHRNNL Trigger: AAGATTATTTCTGTGCACTGATAGGAAAAGGAAGCAAGCCATGAGTGCCTGTTGAAGCTGGAAAAGCAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
||
| CDS CCA 72 bp | TACAAGGAGACTCAAACAGCTGTAGCTAGAATAACATaGGCTGGAAGATCCACTTTCAAGACAACTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: YKETQTAVARIT*AGRSTFKTTSS Trigger: TGAAGAAGTTGTCTTGAAAGTGGATCTTCCAGCCCATGTTATTCTAGCTACAGCTGTTTGAGTCTCCTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000515704.1 ENST00000655008.1 ENST00000661194.1 ENST00000667817.1 |
||
| CDS CAA 90 bp | ACTGAAAAAGCCTTTGCTTCAGAGGACATTATTCCTGTGTCAGACTaGCTTCCCGACATGCTGAAAGTCCCTTTGAATTCAAATGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TEKAFASEDIIPVSD*LPDMLKVPLNSNVL Trigger: TAAAACATTTGAATTCAAAGGGACTTTCAGCATGTCGGGAAGCAAGTCTGACACAGGAATAATGTCCTCTGAAGCAAAGGCTTTTTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS CAA 90 bp | CAGTATAATCTTCTTACCTCTTTTAGACAGCCCGATGCCTCTGACTaGCTAAGAAACCACTTGCATCCACTTACCAATTACAATATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: QYNLLTSFRQPDASD*LRNHLHPLTNYNML Trigger: TAGCATATTGTAATTGGTAAGTGGATGCAAGTGGTTTCTTAGCAAGTCAGAGGCATCGGGCTGTCTAAAAGAGGTAAGAAGATTATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506769.1 |
||
| CDS TCA 72 bp | TGCTGCAATGACAATATCACCATGAAAGGAGATTACTaGTTTGTAGCCAGGGTTGATCCACAATTAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CCNDNITMKGDY*FVARVDPQLAK Trigger: CTTTGCTAATTGTGGATCAACCCTGGCTACAAATCAGTAATCTCCTTTCATGGTGATATTGTCATTGCAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660173.1 |
||
| CDS GCA 72 bp | CTCCAAAATGTGATGATCCATCATATTGAGACCATCTaGATTAAAACCATCCACTCCAACTCTTTCCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LQNVMIHHIETI*IKTIHSNSFLM Trigger: CATGAGGAAAGAGTTGGAGTGGATGGTTTTAATGCAGATGGTCTCAATATGATGGATCATCACATTTTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515704.1 |
||
| CDS CCA 72 bp | ATTTTTACAGAAGGCGTACACATTCCTATTTATAGCTaGCTTAGGCTGTGGTCAAAAGTGATGTGCCTATTC | + |
|
Preference number: 6 (lower is better) Translates to: IFTEGVHIPIYS*LRLWSKVMCLF Trigger: GAATAGGCACATCACTTTTGACCACAGCCTAAGCCAGCTATAAATAGGAATGTGTACGCCTTCTGTAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660173.1 |
||
| CDS CAA 72 bp | AATAGGCCTAGAGGCCATTCAGCTAGTACGGATAGGTaGTTGATGTTTTTCTACCTTCTTAAGGGAAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: NRPRGHSASTDR*LMFFYLLKGNK Trigger: TTTATTTCCCTTAAGAAGGTAGAAAAACATCAACAACCTATCCGTACTAGCTGAATGGCCTCTAGGCCTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653787.1 ENST00000654806.1 ENST00000659234.1 |
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| CDS GCA 72 bp | AATGAGAAAATGGTCATCTCATTCTTAGCCCGAATGTaGAGTATTTCCAAATACCTGAAGCCAAGCATTATT | + |
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Preference number: 6 (lower is better) Translates to: NEKMVISFLARM*SISKYLKPSII Trigger: AATAATGCTTGGCTTCAGGTATTTGGAAATACTGCACATTCGGGCTAAGAATGAGATGACCATTTTCTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506769.1 ENST00000659234.1 |
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