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Pregenerated sensors for LINC02206 (Homo sapiens)

Ensembl gene IDs: ENSG00000259289

Ensembl transcript IDs: ENST00000558436.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TGGAGGCATTTCCCGAGATCTACTATGCACAAGATGCCAGGGTGGTaGGGAGGAGCATCTGGCAGGGGCTCTTGGCAGCCACTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: WRHFPRSTMHKMPGW*GGASGRGSWQPLEF
Trigger: GAACTCCAGTGGCTGCCAAGAGCCCCTGCCAGATGCTCCTCCCCACCACCCTGGCATCTTGTGCATAGTAGATCTCGGGAAATGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS TCA 90 bp CAGCATGGGCAACCTGGCGAAATCCCACCTCTAGGAAACTCCAGGTaGCTCACAGCCAGCACTCTGGGCAACAAACAGGAGATTGGCCTT +
Preference number: 5 (lower is better)
Translates to: QHGQPGEIPPLGNSR*LTASTLGNKQEIGL
Trigger: AAGGCCAATCTCCTGTTTGTTGCCCAGAGTGCTGGCTGTGAGTCACCTGGAGTTTCCTAGAGGTGGGATTTCGCCAGGTTGCCCATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS GCA 90 bp AGATCTGGCTCTTCACCCAGAACAGTTTCTCCTGGCTGTGCTCCATaGTGTCCTCTGGCCACACCTCTTTACCAGGCCGCTATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: RSGSSPRTVSPGCAP*CPLATPLYQAAISH
Trigger: ATGGGAAATAGCGGCCTGGTAAAGAGGTGTGGCCAGAGGACAGCATGGAGCACAGCCAGGAGAAACTGTTCTGGGTGAAGAGCCAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS CCA 90 bp CTCCAGGTGACTCACAGCCAGCACTCTGGGCAACAAACAGGAGATTaGCCTTCCTTTCCAATAGCAGTCATGATGGAGGCATTTCCCGAG +
Preference number: 5 (lower is better)
Translates to: LQVTHSQHSGQQTGD*PSFPIAVMMEAFPE
Trigger: CTCGGGAAATGCCTCCATCATGACTGCTATTGGAAAGGAAGGCCAATCTCCTGTTTGTTGCCCAGAGTGCTGGCTGTGAGTCACCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS CCA 90 bp TGTCCTCTGGCCACACCTCTTTACCAGGCCGCTATTTCCCATTTTTaGTTCCCTTTTCCTCAGCAAGGTCTCTCTAGCTTCAGCCATTGG +
Preference number: 5 (lower is better)
Translates to: CPLATPLYQAAISHF*FPFPQQGLSSFSHW
Trigger: CCAATGGCTGAAGCTAGAGAGACCTTGCTGAGGAAAAGGGAACCAAAAATGGGAAATAGCGGCCTGGTAAAGAGGTGTGGCCAGAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS CCA 72 bp TTCCCGAGATCTACTATGCACAAGATGCCAGGGTGGTaGGGAGGAGCATCTGGCAGGGGCTCTTGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: FPRSTMHKMPGW*GGASGRGSWQP
Trigger: TGGCTGCCAAGAGCCCCTGCCAGATGCTCCTCCCCACCACCCTGGCATCTTGTGCATAGTAGATCTCGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS TCA 72 bp CAACCTGGCGAAATCCCACCTCTAGGAAACTCCAGGTaGCTCACAGCCAGCACTCTGGGCAACAAACAGGAG +
Preference number: 6 (lower is better)
Translates to: QPGEIPPLGNSR*LTASTLGNKQE
Trigger: CTCCTGTTTGTTGCCCAGAGTGCTGGCTGTGAGTCACCTGGAGTTTCCTAGAGGTGGGATTTCGCCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS CAA 90 bp GAAGCAGGAGCTGCTGCAGGGGCTGAGAAAGCAGGAAGGAGCTCTTaGCTGCATTCCAGAGCAGATCTGGCTCTTCACCCAGAACAGTTT +
Preference number: 6 (lower is better)
Translates to: EAGAAAGAEKAGRSS*LHSRADLALHPEQF
Trigger: AAACTGTTCTGGGTGAAGAGCCAGATCTGCTCTGGAATGCAGCAAAGAGCTCCTTCCTGCTTTCTCAGCCCCTGCAGCAGCTCCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS GCA 72 bp ATCTGGCTCTTCACCCAGAACAGTTTCTCCTGGCTGTaGTCCATGCTGTCCTCTGGCCACACCTCTTTACCA +
Preference number: 6 (lower is better)
Translates to: IWLFTQNSFSWL*SMLSSGHTSLP
Trigger: TGGTAAAGAGGTGTGGCCAGAGGACAGCATGGAGCACAGCCAGGAGAAACTGTTCTGGGTGAAGAGCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS CCA 72 bp ACTCACAGCCAGCACTCTGGGCAACAAACAGGAGATTaGCCTTCCTTTCCAATAGCAGTCATGATGGAGGCA +
Preference number: 6 (lower is better)
Translates to: THSQHSGQQTGD*PSFPIAVMMEA
Trigger: TGCCTCCATCATGACTGCTATTGGAAAGGAAGGCCAATCTCCTGTTTGTTGCCCAGAGTGCTGGCTGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS CCA 72 bp GCCACACCTCTTTACCAGGCCGCTATTTCCCATTTTTaGTTCCCTTTTCCTCAGCAAGGTCTCTCTAGCTTC +
Preference number: 6 (lower is better)
Translates to: ATPLYQAAISHF*FPFPQQGLSSF
Trigger: GAAGCTAGAGAGACCTTGCTGAGGAAAAGGGAACCAAAAATGGGAAATAGCGGCCTGGTAAAGAGGTGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558436.2
CDS CAA 72 bp AATCTTCCCAAGGCTTCTAGTGCCCAGCAGACTGGTTaGCAAACCAGTCTTCTAAAGCAATCTTCTTTCTAT +
Preference number: 6 (lower is better)
Translates to: NLPKASSAQQTG*QTSLLKQSSFY
Trigger: ATAGAAAGAAGATTGCTTTAGAAGACTGGTTTGCAAACCAGTCTGCTGGGCACTAGAAGCCTTGGGAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558436.2