Pregenerated sensors for LINC02204 (Homo sapiens)
Ensembl gene IDs: ENSG00000280639Ensembl transcript IDs: ENST00000630447.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTAGAGTTGTTCGTTTCTCCCGGTGGGCTCGCGGTCTCCCGGGCTTaGGGAGTGAAGCTGCAGACCTTCCCAGTGAGTGTTACAACTCAC | + |
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Preference number: 5 (lower is better) Translates to: LELFVSPGGLAVSRA*GVKLQTFPVSVTTH Trigger: GTGAGTTGTAACACTCACTGGGAAGGTCTGCAGCTTCACTCCTCAAGCCCGGGAGACCGCGAGCCCACCGGGAGAAACGAACAACTCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 90 bp | TGTAGTAGGGGGCTGTCCCATCTCTGTGCTGTGTATGTCAGGGCTTaGGGAGAAAGGCCCTACGAAGCACGTCCATCCTACCTGCCTATA | + |
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Preference number: 5 (lower is better) Translates to: CSRGLSHLCAVYVRA*GERPYEARPSYLPI Trigger: TATAGGCAGGTAGGATGGACGTGCTTCGTAGGGCCTTTCTCCGCAAGCCCTGACATACACAGCACAGAGATGGGACAGCCCCCTACTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | CTGACGTTCAGACGTATTCGGGGTTTCTTCCTTCTGGTGGGCTCGTaGTCTCGCTGGCTCAGGAGTAAAGCTGCAGACCTTCGCAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: LTFRRIRGFFLLVGS*SRWLRSKAADLRSE Trigger: TTCACTGCGAAGGTCTGCAGCTTTACTCCTGAGCCAGCGAGACCACGAGCCCACCAGAAGGAAGAAACCCCGAATACGTCTGAACGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 90 bp | ATAGCATGGGTCAAACATGGCATAGACATATCCCAGCTGCCCTCTTaGCCAGGCGCTGACCAGTCTCAACAAGCCCGTCAGAATGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: IAWVKHGIDISQLPS*PGADQSQQARQNEV Trigger: GACCTCATTCTGACGGGCTTGTTGAGACTGGTCAGCGCCTGGGCAAGAGGGCAGCTGGGATATGTCTATGCCATGTTTGACCCATGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 90 bp | CACTTACCAATAAGGAAACAGTCACCGGTAAGGCCTCAGTGTCAGTaGCTGCAGGAGGCACATGTCAACCTGAAATCGGGAAAGGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: HLPIRKQSPVRPQCQ*LQEAHVNLKSGKGQ Trigger: CTGGCCCTTTCCCGATTTCAGGTTGACATGTGCCTCCTGCAGGCACTGACACTGAGGCCTTACCGGTGACTGTTTCCTTATTGGTAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 90 bp | CAGTACAGGAGGCAAAAGCAGCCACGATCTGGGAAGAAGGTAGAGTaGGAGGGAGCTGTGAAAGCTGTCTGGGCAATGCCAAGGACATTA | + |
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Preference number: 5 (lower is better) Translates to: QYRRQKQPRSGKKVE*EGAVKAVWAMPRTL Trigger: TAATGTCCTTGGCATTGCCCAGACAGCTTTCACAGCTCCCTCTCACTCTACCTTCTTCCCAGATCGTGGCTGCTTTTGCCTCCTGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 90 bp | GGTGCCACTTCCATCCCTGTAGACCTTGAGCGTAAACAACCTTCTTaGCAGAAATGCAAGTGGATTCCGGCATGGTGGAGGATTGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: GATSIPVDLERKQPS*QKCKWIPAWWRIES Trigger: ACTCTCAATCCTCCACCATGCCGGAATCCACTTGCATTTCTGGCAAGAAGGTTGTTTACGCTCAAGGTCTACAGGGATGGAAGTGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | GGCCTCCTAAAGTACTGGGATTATAGGTATTGTGTCCCGAATTGGTaGGTTCTTGGTCTCACTGACTTCAAGACTGAAGCCGCGGACCCT | + |
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Preference number: 5 (lower is better) Translates to: GLLKYWDYRYCVPNW*VLGLTDFKTEAADP Trigger: AGGGTCCGCGGCTTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACAATACCTATAATCCCAGTACTTTAGGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | CCTGGCCTCCTAAAGTACTGGGATTATAGGTATTGTGTCCCGAATTaGTGGGTTCTTGGTCTCACTGACTTCAAGACTGAAGCCGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: PGLLKYWDYRYCVPN*WVLGLTDFKTEAAD Trigger: GTCCGCGGCTTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACAATACCTATAATCCCAGTACTTTAGGAGGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | CGTAAACAACCTTCTTGCCAGAAATGCAAGTGGATTCCGGCATGGTaGAGGATTGAGAGTCAGGAGATTGGACTCCAGTCAGCTCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RKQPSCQKCKWIPAW*RIESQEIGLQSAQP Trigger: TGGCTGAGCTGACTGGAGTCCAATCTCCTGACTCTCAATCCTCCACCATGCCGGAATCCACTTGCATTTCTGGCAAGAAGGTTGTTTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | GAGCGTAAACAACCTTCTTGCCAGAAATGCAAGTGGATTCCGGCATaGTGGAGGATTGAGAGTCAGGAGATTGGACTCCAGTCAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: ERKQPSCQKCKWIPA*WRIESQEIGLQSAQ Trigger: CTGAGCTGACTGGAGTCCAATCTCCTGACTCTCAATCCTCCACCATGCCGGAATCCACTTGCATTTCTGGCAAGAAGGTTGTTTACGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | CTGCTCGAAGAGTTGGAGAAACAACTCATGGATCAACCCTTTTTATaGCTGGCCGCCGATGGCAAGAGGAAAATACTAGTGCCTGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LLEELEKQLMDQPFL*LAADGKRKILVPGL Trigger: GAGCCCAGGCACTAGTATTTTCCTCTTGCCATCGGCGGCCAGCCATAAAAAGGGTTGATCCATGAGTTGTTTCTCCAACTCTTCGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 90 bp | TCACAAAAGCAGTGTGGACCCAGGGTGAGCAGTAACAAGATTTATTaGAAAGAGCGAAAGAACAAACCTCCCACACTGCGGCAGTGGACC | + |
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Preference number: 5 (lower is better) Translates to: SQKQCGPRVSSNKIY*KERKNKPPTLRQWT Trigger: GGTCCACTGCCGCAGTGTGGGAGGTTTGTTCTTTCGCTCTTTGCAATAAATCTTGTTACTGCTCACCCTGGGTCCACACTGCTTTTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | CCTGTAGACCTTGAGCGTAAACAACCTTCTTGCCAGAAATGCAAGTaGATTCCGGCATGGTGGAGGATTGAGAGTCAGGAGATTGGACTC | + |
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Preference number: 5 (lower is better) Translates to: PVDLERKQPSCQKCK*IPAWWRIESQEIGL Trigger: GAGTCCAATCTCCTGACTCTCAATCCTCCACCATGCCGGAATCCACTTGCATTTCTGGCAAGAAGGTTGTTTACGCTCAAGGTCTACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | CAGTGCCATGAACTGAGCTGCTCGAAGAGTTGGAGAAACAACTCATaGATCAACCCTTTTTATGGCTGGCCGCCGATGGCAAGAGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: QCHELSCSKSWRNNS*INPFYGWPPMARGK Trigger: TTTTCCTCTTGCCATCGGCGGCCAGCCATAAAAAGGGTTGATCCATGAGTTGTTTCTCCAACTCTTCGAGCAGCTCAGTTCATGGCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | GGCCTCCTAAGATGCAAACAGAGCTTGAGAAAAATGAATCTGTCTTaGCTGTGCAGAATGGATCAAAGGTGGAGAAGCCAGAGGCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: GLLRCKQSLRKMNLS*LCRMDQRWRSQRQG Trigger: TCCCTGCCTCTGGCTTCTCCACCTTTGATCCATTCTGCACAGCCAAGACAGATTCATTTTTCTCAAGCTCTGTTTGCATCTTAGGAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 90 bp | CTAAGATGCAAACAGAGCTTGAGAAAAATGAATCTGTCTTGGCTGTaGAGAATGGATCAAAGGTGGAGAAGCCAGAGGCAGGGAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LRCKQSLRKMNLSWL*RMDQRWRSQRQGAL Trigger: CAGAGCTCCCTGCCTCTGGCTTCTCCACCTTTGATCCATTCTGCACAGCCAAGACAGATTCATTTTTCTCAAGCTCTGTTTGCATCTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | GGAGAAACAACTCATGGATCAACCCTTTTTATGGCTGGCCGCCGATaGCAAGAGGAAAATACTAGTGCCTGGGCTCCTTGTTATAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: GETTHGSTLFMAGRR*QEENTSAWAPCYKV Trigger: CACTTTATAACAAGGAGCCCAGGCACTAGTATTTTCCTCTTGCCATCGGCGGCCAGCCATAAAAAGGGTTGATCCATGAGTTGTTTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 90 bp | AACAATGTTGAGCGGGTTAGTCTAAACTATAGCAGTGCCATGAACTaGGCTGCTCGAAGAGTTGGAGAAACAACTCATGGATCAACCCTT | + |
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Preference number: 5 (lower is better) Translates to: NNVERVSLNYSSAMN*AARRVGETTHGSTL Trigger: AAGGGTTGATCCATGAGTTGTTTCTCCAACTCTTCGAGCAGCTCAGTTCATGGCACTGCTATAGTTTAGACTAACCCGCTCAACATTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | CTTTTTATGGCTGGCCGCCGATGGCAAGAGGAAAATACTAGTGCCTaGGCTCCTTGTTATAAAGTGTGGAAGAATTCTTTCCAGAATTCT | + |
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Preference number: 5 (lower is better) Translates to: LFMAGRRWQEENTSA*APCYKVWKNSFQNS Trigger: AGAATTCTGGAAAGAATTCTTCCACACTTTATAACAAGGAGCCCAGGCACTAGTATTTTCCTCTTGCCATCGGCGGCCAGCCATAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 90 bp | GAGAGTTACAAAGATGTGTATGTGTGTGCTTGTGTGCGTGTAACGTaGTCTTTTTCCTCAGAGAGTTTCCACCTAGGAAAGCAACACACT | + |
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Preference number: 5 (lower is better) Translates to: ESYKDVYVCACVRVT*SFSSESFHLGKQHT Trigger: AGTGTGTTGCTTTCCTAGGTGGAAACTCTCTGAGGAAAAAGATCACGTTACACGCACACAAGCACACACATACACATCTTTGTAACTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 90 bp | GTTGTCAAAGAGTTGAACGAAAGTGCTGGACAACACTGGCTGGTATaGAAATATCTAGCATCCAAGTTATCTTTGCTAGATCCAATGGGG | + |
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Preference number: 5 (lower is better) Translates to: VVKELNESAGQHWLV*KYLASKLSLLDPMG Trigger: CCCCATTGGATCTAGCAAAGATAACTTGGATGCTAGATATTTGCATACCAGCCAGTGTTGTCCAGCACTTTCGTTCAACTCTTTGACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | GGGAAAAGGGATTTTTCAGATGTGATTAAGTTAAGGCTTCTGAGATaGGGAGATTACCCTGGATTATCCAGATGGGCTCCTAATGTAATT | + |
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Preference number: 5 (lower is better) Translates to: GKRDFSDVIKLRLLR*GDYPGLSRWAPNVI Trigger: AATTACATTAGGAGCCCATCTGGATAATCCAGGGTAATCTCCCCATCTCAGAAGCCTTAACTTAATCACATCTGAAAAATCCCTTTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 90 bp | GTGACGATAGTTGTCAAAGAGTTGAACGAAAGTGCTGGACAACACTaGCTGGTATGCAAATATCTAGCATCCAAGTTATCTTTGCTAGAT | + |
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Preference number: 5 (lower is better) Translates to: VTIVVKELNESAGQH*LVCKYLASKLSLLD Trigger: ATCTAGCAAAGATAACTTGGATGCTAGATATTTGCATACCAGCCAGTGTTGTCCAGCACTTTCGTTCAACTCTTTGACAACTATCGTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CAA 72 bp | GTTCGTTTCTCCCGGTGGGCTCGCGGTCTCCCGGGCTaGAGGAGTGAAGCTGCAGACCTTCCCAGTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: VRFSRWARGLPG*RSEAADLPSEC Trigger: ACACTCACTGGGAAGGTCTGCAGCTTCACTCCTCAAGCCCGGGAGACCGCGAGCCCACCGGGAGAAACGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CAA 72 bp | GGGGCTGTCCCATCTCTGTGCTGTGTATGTCAGGGCTaGCGGAGAAAGGCCCTACGAAGCACGTCCATCCTA | + |
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Preference number: 6 (lower is better) Translates to: GAVPSLCCVCQG*RRKALRSTSIL Trigger: TAGGATGGACGTGCTTCGTAGGGCCTTTCTCCGCAAGCCCTGACATACACAGCACAGAGATGGGACAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CAA 90 bp | TCTAGAGTTGTTCGTTTCTCCCGGTGGGCTCGCGGTCTCCCGGGCTaGAGGAGTGAAGCTGCAGACCTTCCCAGTGAGTGTTACAACTCA | + |
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Preference number: 6 (lower is better) Translates to: SRVVRFSRWARGLPG*RSEAADLPSECYNS Trigger: TGAGTTGTAACACTCACTGGGAAGGTCTGCAGCTTCACTCCTCAAGCCCGGGAGACCGCGAGCCCACCGGGAGAAACGAACAACTCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 72 bp | TGTTGTTCAGGCTCCTCTCCAACCCCTGAGCTCAGATaGTCCGCCTGCCCTGGCCTCCTAAAGTACTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: CCSGSSPTPELR*SACPGLLKYWD Trigger: ATCCCAGTACTTTAGGAGGCCAGGGCAGGCGGATCATCTGAGCTCAGGGGTTGGAGAGGAGCCTGAACAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 72 bp | GGTTTCGGTATGTTGTTCAGGCTCCTCTCCAACCCCTaGGCTCAGATGATCCGCCTGCCCTGGCCTCCTAAA | + |
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Preference number: 6 (lower is better) Translates to: GFGMLFRLLSNP*AQMIRLPWPPK Trigger: TTTAGGAGGCCAGGGCAGGCGGATCATCTGAGCTCAGGGGTTGGAGAGGAGCCTGAACAACATACCGAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | AGACGTATTCGGGGTTTCTTCCTTCTGGTGGGCTCGTaGTCTCGCTGGCTCAGGAGTAAAGCTGCAGACCTT | + |
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Preference number: 6 (lower is better) Translates to: RRIRGFFLLVGS*SRWLRSKAADL Trigger: AAGGTCTGCAGCTTTACTCCTGAGCCAGCGAGACCACGAGCCCACCAGAAGGAAGAAACCCCGAATACGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 72 bp | TTAGGGCATCGTTCTGTTCCCCAGGTTGGAGTGTCCTaGCGCAATCCCTGTTTACTGCAGCCTCAACCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LGHRSVPQVGVS*RNPCLLQPQPP Trigger: TGGAGGTTGAGGCTGCAGTAAACAGGGATTGCGTCAGGACACTCCAACCTGGGGAACAGAACGATGCCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 72 bp | CCAGAAATGCAAGTGGATTCCGGCATGGTGGAGGATTaGGAGTCAGGAGATTGGACTCCAGTCAGCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PEMQVDSGMVED*ESGDWTPVSSA Trigger: GGCTGAGCTGACTGGAGTCCAATCTCCTGACTCTCAATCCTCCACCATGCCGGAATCCACTTGCATTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 72 bp | CTCAGTGTCAGTGCCTGCAGGAGGCACATGTCAACCTaGAATCGGGAAAGGGCCAGGCTTTTAAGAAGACAG | + |
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Preference number: 6 (lower is better) Translates to: LSVSACRRHMST*NRERARLLRRQ Trigger: CTGTCTTCTTAAAAGCCTGGCCCTTTCCCGATTTCAGGTTGACATGTGCCTCCTGCAGGCACTGACACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 72 bp | TCCATCCCTGTAGACCTTGAGCGTAAACAACCTTCTTaGCAGAAATGCAAGTGGATTCCGGCATGGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SIPVDLERKQPS*QKCKWIPAWWR Trigger: CCTCCACCATGCCGGAATCCACTTGCATTTCTGGCAAGAAGGTTGTTTACGCTCAAGGTCTACAGGGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | CCTTCTTGCCAGAAATGCAAGTGGATTCCGGCATGGTaGAGGATTGAGAGTCAGGAGATTGGACTCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSCQKCKWIPAW*RIESQEIGLQS Trigger: TGACTGGAGTCCAATCTCCTGACTCTCAATCCTCCACCATGCCGGAATCCACTTGCATTTCTGGCAAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | CAACCTTCTTGCCAGAAATGCAAGTGGATTCCGGCATaGTGGAGGATTGAGAGTCAGGAGATTGGACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QPSCQKCKWIPA*WRIESQEIGLQ Trigger: CTGGAGTCCAATCTCCTGACTCTCAATCCTCCACCATGCCGGAATCCACTTGCATTTCTGGCAAGAAGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | ACTCATGGATCAACCCTTTTTATGGCTGGCCGCCGATaGCAAGAGGAAAATACTAGTGCCTGGGCTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: THGSTLFMAGRR*QEENTSAWAPC Trigger: ACAAGGAGCCCAGGCACTAGTATTTTCCTCTTGCCATCGGCGGCCAGCCATAAAAAGGGTTGATCCATGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | GAACTGAGCTGCTCGAAGAGTTGGAGAAACAACTCATaGATCAACCCTTTTTATGGCTGGCCGCCGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: ELSCSKSWRNNS*INPFYGWPPMA Trigger: TGCCATCGGCGGCCAGCCATAAAAAGGGTTGATCCATGAGTTGTTTCTCCAACTCTTCGAGCAGCTCAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CAA 72 bp | GGGATTATAGGTATTGTGTCCCGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGACTGAAGCCGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: GIIGIVSRIGGF*VSLTSRLKPRT Trigger: GGTCCGCGGCTTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACAATACCTATAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 72 bp | CAGTGTGGACCCAGGGTGAGCAGTAACAAGATTTATTaGAAAGAGCGAAAGAACAAACCTCCCACACTGCGG | + |
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Preference number: 6 (lower is better) Translates to: QCGPRVSSNKIY*KERKNKPPTLR Trigger: CCGCAGTGTGGGAGGTTTGTTCTTTCGCTCTTTGCAATAAATCTTGTTACTGCTCACCCTGGGTCCACACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | CTTGAGCGTAAACAACCTTCTTGCCAGAAATGCAAGTaGATTCCGGCATGGTGGAGGATTGAGAGTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LERKQPSCQKCK*IPAWWRIESQE Trigger: CTCCTGACTCTCAATCCTCCACCATGCCGGAATCCACTTGCATTTCTGGCAAGAAGGTTGTTTACGCTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CAA 90 bp | AGGCCTCCTAAGATGCAAACAGAGCTTGAGAAAAATGAATCTGTCTaGGCTGTGCAGAATGGATCAAAGGTGGAGAAGCCAGAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RPPKMQTELEKNESV*AVQNGSKVEKPEAG Trigger: CCCTGCCTCTGGCTTCTCCACCTTTGATCCATTCTGCACAGCCAAGACAGATTCATTTTTCTCAAGCTCTGTTTGCATCTTAGGAGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 72 bp | GTAGACCTTGAGCGTAAACAACCTTCTTGCCAGAAATaGAAGTGGATTCCGGCATGGTGGAGGATTGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: VDLERKQPSCQK*KWIPAWWRIES Trigger: ACTCTCAATCCTCCACCATGCCGGAATCCACTTGCATTTCTGGCAAGAAGGTTGTTTACGCTCAAGGTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | GCTGGCCGCCGATGGCAAGAGGAAAATACTAGTGCCTaGGCTCCTTGTTATAAAGTGTGGAAGAATTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: AGRRWQEENTSA*APCYKVWKNSF Trigger: GAAAGAATTCTTCCACACTTTATAACAAGGAGCCCAGGCACTAGTATTTTCCTCTTGCCATCGGCGGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 72 bp | GAGCGGGTTAGTCTAAACTATAGCAGTGCCATGAACTaGGCTGCTCGAAGAGTTGGAGAAACAACTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: ERVSLNYSSAMN*AARRVGETTHG Trigger: TCCATGAGTTGTTTCTCCAACTCTTCGAGCAGCTCAGTTCATGGCACTGCTATAGTTTAGACTAACCCGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | GAGTTGGAGAAACAACTCATGGATCAACCCTTTTTATaGCTGGCCGCCGATGGCAAGAGGAAAATACTAGTG | + |
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Preference number: 6 (lower is better) Translates to: ELEKQLMDQPFL*LAADGKRKILV Trigger: CACTAGTATTTTCCTCTTGCCATCGGCGGCCAGCCATAAAAAGGGTTGATCCATGAGTTGTTTCTCCAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 72 bp | GAGCTCAGGAAAGGGATAGTTCACCCTGCAGGAGACTaGATCCGAAAAGGCTCATTAGTCATTATGATTCCT | + |
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Preference number: 6 (lower is better) Translates to: ELRKGIVHPAGD*IRKGSLVIMIP Trigger: AGGAATCATAATGACTAATGAGCCTTTTCGGATTCAGTCTCCTGCAGGGTGAACTATCCCTTTCCTGAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 72 bp | AATCGGGAAAGGGCCAGGCTTTTAAGAAGACAGGTGTaGAGCTACAAGTCACAGTGCCTTTCAAAACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: NRERARLLRRQV*SYKSQCLSKLF Trigger: GAAGAGTTTTGAAAGGCACTGTGACTTGTAGCTTCACACCTGTCTTCTTAAAAGCCTGGCCCTTTCCCGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | AAGTACTGGGATTATAGGTATTGTGTCCCGAATTGGTaGGTTCTTGGTCTCACTGACTTCAAGACTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: KYWDYRYCVPNW*VLGLTDFKTEA Trigger: GGCTTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACAATACCTATAATCCCAGTACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | AGATGCAAACAGAGCTTGAGAAAAATGAATCTGTCTTaGCTGTGCAGAATGGATCAAAGGTGGAGAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RCKQSLRKMNLS*LCRMDQRWRSQ Trigger: CTGGCTTCTCCACCTTTGATCCATTCTGCACAGCCAAGACAGATTCATTTTTCTCAAGCTCTGTTTGCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CAA 72 bp | AAGCAGTATAGGAATGTGACGATAGTTGTCAAAGAGTaGAACGAAAGTGCTGGACAACACTGGCTGGTATGC | + |
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Preference number: 6 (lower is better) Translates to: KQYRNVTIVVKE*NESAGQHWLVC Trigger: GCATACCAGCCAGTGTTGTCCAGCACTTTCGTTCAACTCTTTGACAACTATCGTCACATTCCTATACTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 72 bp | AGTGTTACAACTCACAAAAGCAGTGTGGACCCAGGGTaGGCAGTAACAAGATTTATTGCAAAGAGCGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SVTTHKSSVDPG*AVTRFIAKSER Trigger: TCTTTCGCTCTTTGCAATAAATCTTGTTACTGCTCACCCTGGGTCCACACTGCTTTTGTGAGTTGTAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS TCA 72 bp | AAAGATGTGTATGTGTGTGCTTGTGTGCGTGTAACGTaGTCTTTTTCCTCAGAGAGTTTCCACCTAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KDVYVCACVRVT*SFSSESFHLGK Trigger: CTTTCCTAGGTGGAAACTCTCTGAGGAAAAAGATCACGTTACACGCACACAAGCACACACATACACATCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 72 bp | GAATGTGACGATAGTTGTCAAAGAGTTGAACGAAAGTaGTGGACAACACTGGCTGGTATGCAAATATCTAGC | + |
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Preference number: 6 (lower is better) Translates to: ECDDSCQRVERK*WTTLAGMQISS Trigger: GCTAGATATTTGCATACCAGCCAGTGTTGTCCAGCACTTTCGTTCAACTCTTTGACAACTATCGTCACATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | CTAAAGTACTGGGATTATAGGTATTGTGTCCCGAATTaGTGGGTTCTTGGTCTCACTGACTTCAAGACTGAA | + |
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Preference number: 6 (lower is better) Translates to: LKYWDYRYCVPN*WVLGLTDFKTE Trigger: TTCAGTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCGGGACACAATACCTATAATCCCAGTACTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | GATTTTTCAGATGTGATTAAGTTAAGGCTTCTGAGATaGGGAGATTACCCTGGATTATCCAGATGGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: DFSDVIKLRLLR*GDYPGLSRWAP Trigger: AGGAGCCCATCTGGATAATCCAGGGTAATCTCCCCATCTCAGAAGCCTTAACTTAATCACATCTGAAAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | GCAACCAACCCTAGCACTTCCAAGAGTACAAACTTATaGAGTATAAACCAGTTGGCATCACTGGTTTATGGT | + |
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Preference number: 6 (lower is better) Translates to: ATNPSTSKSTNL*SINQLASLVYG Trigger: ACCATAAACCAGTGATGCCAACTGGTTTATACTCCATAAGTTTGTACTCTTGGAAGTGCTAGGGTTGGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | TGTGACGATAGTTGTCAAAGAGTTGAACGAAAGTGCTaGACAACACTGGCTGGTATGCAAATATCTAGCATC | + |
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Preference number: 6 (lower is better) Translates to: CDDSCQRVERKC*TTLAGMQISSI Trigger: GATGCTAGATATTTGCATACCAGCCAGTGTTGTCCAGCACTTTCGTTCAACTCTTTGACAACTATCGTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CAA 72 bp | AAGATGCAAACAGAGCTTGAGAAAAATGAATCTGTCTaGGCTGTGCAGAATGGATCAAAGGTGGAGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: KMQTELEKNESV*AVQNGSKVEKP Trigger: TGGCTTCTCCACCTTTGATCCATTCTGCACAGCCAAGACAGATTCATTTTTCTCAAGCTCTGTTTGCATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS GCA 72 bp | GAGTTGAACGAAAGTGCTGGACAACACTGGCTGGTATaGAAATATCTAGCATCCAAGTTATCTTTGCTAGAT | + |
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Preference number: 6 (lower is better) Translates to: ELNESAGQHWLV*KYLASKLSLLD Trigger: ATCTAGCAAAGATAACTTGGATGCTAGATATTTGCATACCAGCCAGTGTTGTCCAGCACTTTCGTTCAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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| CDS CCA 72 bp | GTTGTCAAAGAGTTGAACGAAAGTGCTGGACAACACTaGCTGGTATGCAAATATCTAGCATCCAAGTTATCT | + |
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Preference number: 6 (lower is better) Translates to: VVKELNESAGQH*LVCKYLASKLS Trigger: AGATAACTTGGATGCTAGATATTTGCATACCAGCCAGTGTTGTCCAGCACTTTCGTTCAACTCTTTGACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630447.1 |
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