Pregenerated sensors for LINC02196 (Homo sapiens)
Ensembl gene IDs: ENSG00000250974Ensembl transcript IDs: ENST00000512838.2, ENST00000648809.1, ENST00000651243.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAAGAAGGGCTGTGGGAGCATGAGGAAGGAGGGTCTCTGCCTCAGTaGGCAGGCATGGGGGAGGCACCCAGAGGAGCTGCAGCCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: EEGLWEHEEGGSLPQ*AGMGEAPRGAAAWL Trigger: AAGCCAGGCTGCAGCTCCTCTGGGTGCCTCCCCCATGCCTGCCCACTGAGGCAGAGACCCTCCTTCCTCATGCTCCCACAGCCCTTCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CCA 90 bp | GCCCCTGTGCCCACGTCCCAGCTCCCCGAGGATAACAGCAGGCCATaGCCAAGGCAGCATCATCTCCAGGCAGCCACAAGAGCTCTAACA | + |
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Preference number: 5 (lower is better) Translates to: APVPTSQLPEDNSRP*PRQHHLQAATRALT Trigger: TGTTAGAGCTCTTGTGGCTGCCTGGAGATGATGCTGCCTTGGCCATGGCCTGCTGTTATCCTCGGGGAGCTGGGACGTGGGCACAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS CCA 90 bp | TCAGCAAGAGGATTTCAGGAGCCAGGTCTCAGAGAAGAAGGGCTGTaGGAGCATGAGGAAGGAGGGTCTCTGCCTCAGTGGGCAGGCATG | + |
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Preference number: 5 (lower is better) Translates to: SARGFQEPGLREEGL*EHEEGGSLPQWAGM Trigger: CATGCCTGCCCACTGAGGCAGAGACCCTCCTTCCTCATGCTCCCACAGCCCTTCTTCTCTGAGACCTGGCTCCTGAAATCCTCTTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CCA 90 bp | CATCTCTACGTGTCACAGCTGAGTCCTCACAGTGAGCAAAACGGCTaGAACGTAGAGAGGGAGGGGCTGCCTTTGCTCACTTGGCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: HLYVSQLSPHSEQNG*NVEREGLPLLTWPK Trigger: TTTGGGCCAAGTGAGCAAAGGCAGCCCCTCCCTCTCTACGTTCCAGCCGTTTTGCTCACTGTGAGGACTCAGCTGTGACACGTAGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512838.2 |
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| CDS GCA 90 bp | CAGGGTATTCACTTCAGTCAAAATGCACCATGTAGAGTCGGGGAGTaGATGCCACAGAGCCTGCCTCTAAGCCTCCACTCCGGGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: QGIHFSQNAPCRVGE*MPQSLPLSLHSGKK Trigger: CTTCTTCCCGGAGTGGAGGCTTAGAGGCAGGCTCTGTGGCATGCACTCCCCGACTCTACATGGTGCATTTTGACTGAAGTGAATACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS GCA 90 bp | CAAAGGCTGTCTTTCTGTTCATGCATCTGTCCACAGCTCACCGAGTaGTCCTTGTGTGTCAGAGGTTTTGGCAGGTGCTGGGGCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: QRLSFCSCICPQLTE*SLCVRGFGRCWGSM Trigger: CATGGAGCCCCAGCACCTGCCAAAACCTCTGACACACAAGGAGCACTCGGTGAGCTGTGGACAGATGCATGAACAGAAAGACAGCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CCA 90 bp | GTCCTCATGCATCACTGTCCCAGCCACAGTCATTGCCCACATGACTaGTCAAGGGGAACTTTGCTGTACTTGCATCCTAGGAGCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: VLMHHCPSHSHCPHD*SRGTLLYLHPRSTH Trigger: GTGGGTGCTCCTAGGATGCAAGTACAGCAAAGTTCCCCTTGACCAGTCATGTGGGCAATGACTGTGGCTGGGACAGTGATGCATGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CCA 90 bp | CTCAGAAGAGAAGACAGAAGCCTGGGGAAGTGCACTTCAGCTGCTTaGAGGACAAGGCACATTCATCCTTCGCTTGTCCTCAACTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LRREDRSLGKCTSAA*RTRHIHPSLVLNLC Trigger: GCACAAGTTGAGGACAAGCGAAGGATGAATGTGCCTTGTCCTCCAAGCAGCTGAAGTGCACTTCCCCAGGCTTCTGTCTTCTCTTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS TCA 90 bp | ACACCTGTAATCCCCAGACTTTGGGAAGCCGAGGCGGGCAGATCATaGGGTCAAGAAATCAAGACCATCCTGGCCAATATGGTAAAACCC | + |
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Preference number: 5 (lower is better) Translates to: TPVIPRLWEAEAGRS*GQEIKTILANMVKP Trigger: GGGTTTTACCATATTGGCCAGGATGGTCTTGATTTCTTGACCTCATGATCTGCCCGCCTCGGCTTCCCAAAGTCTGGGGATTACAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512838.2 |
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| CDS TCA 90 bp | CATGGGGAAACACAGCCCCTGGCCATGAGGAGTTATTCACTCAATTaGGGTCACAGACAACTCAGCAAGAGGATTTCAGGAGCCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: HGETQPLAMRSYSLN*GHRQLSKRISGARS Trigger: AGACCTGGCTCCTGAAATCCTCTTGCTGAGTTGTCTGTGACCTCAATTGAGTGAATAACTCCTCATGGCCAGGGGCTGTGTTTCCCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS GCA 90 bp | GTGACTCAGAAGAGAAGACAGAAGCCTGGGGAAGTGCACTTCAGCTaGTTGGAGGACAAGGCACATTCATCCTTCGCTTGTCCTCAACTT | + |
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Preference number: 5 (lower is better) Translates to: VTQKRRQKPGEVHFS*LEDKAHSSFACPQL Trigger: AAGTTGAGGACAAGCGAAGGATGAATGTGCCTTGTCCTCCAAGCAGCTGAAGTGCACTTCCCCAGGCTTCTGTCTTCTCTTCTGAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS GCA 90 bp | GTCCCAGCCACAGTCATTGCCCACATGACTGGTCAAGGGGAACTTTaGTGTACTTGCATCCTAGGAGCACCCACTTTCAGCTTATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VPATVIAHMTGQGEL*CTCILGAPTFSLFL Trigger: GAGAAATAAGCTGAAAGTGGGTGCTCCTAGGATGCAAGTACAGCAAAGTTCCCCTTGACCAGTCATGTGGGCAATGACTGTGGCTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS TCA 90 bp | TGTGTTCACAGAAGCAAAGCACCTTCTGGGTTGTTTTTGTTCTCATaGCCTCTGAACCCCTTTCAGTCCTCATGCATCACTGTCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: CVHRSKAPSGLFLFS*PLNPFQSSCITVPA Trigger: GGCTGGGACAGTGATGCATGAGGACTGAAAGGGGTTCAGAGGTCATGAGAACAAAAACAACCCAGAAGGTGCTTTGCTTCTGTGAACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS TCA 90 bp | TGGATAGATTCATCACCAGATAGTCCTGATTTGAACTCTCGGTTCTaGAGAAGTCAGGGATCCCTGTTGTATAACTGCCCCAGAGATGGT | + |
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Preference number: 5 (lower is better) Translates to: WIDSSPDSPDLNSRF*RSQGSLLYNCPRDG Trigger: ACCATCTCTGGGGCAGTTATACAACAGGGATCCCTGACTTCTTCAGAACCGAGAGTTCAAATCAGGACTATCTGGTGATGAATCTATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000512838.2 ENST00000648809.1 ENST00000651243.2 |
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| CDS CCA 90 bp | ATGGTGAACTGTTACGGGAACTCTTCACATCATAAGTGTCTTCATTaGAGCCAACCCGTCTTCCTCCTTTCCCTTGGGAAATTATTGCTG | + |
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Preference number: 5 (lower is better) Translates to: MVNCYGNSSHHKCLH*SQPVFLLSLGKLLL Trigger: CAGCAATAATTTCCCAAGGGAAAGGAGGAAGACGGGTTGGCTCCAATGAAGACACTTATGATGTGAAGAGTTCCCGTAACAGTTCACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512838.2 ENST00000648809.1 ENST00000651243.2 |
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| CDS TCA 90 bp | CCACTCCTCCATACAATCATCATAACGAGGAACGGGCAAAATCATTaGATTCAAAGGCTGTCTTTCTGTTCATGCATCTGTCCACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: PLLHTIIITRNGQNH*IQRLSFCSCICPQL Trigger: GAGCTGTGGACAGATGCATGAACAGAAAGACAGCCTTTGAATTCAATGATTTTGCCCGTTCCTCGTTATGATGATTGTATGGAGGAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CCA 90 bp | ATCAATTTGCAGCAGCTTGGTGAGTACATTGAAGAGAAGTTAAGGTaGATGGGGTATGGTCATTTAGAAAACTACTTAACCAGTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: INLQQLGEYIEEKLR*MGYGHLENYLTSLR Trigger: CCTCAAACTGGTTAAGTAGTTTTCTAAATGACCATACCCCATCCACCTTAACTTCTCTTCAATGTACTCACCAAGCTGCTGCAAATTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS TCA 90 bp | GATATAGGGTCTAAAATTTCTTGGGACCAGGAGACCTCATTCTCATaGTTGTTTCTCCTTAACTATATTGAAAACGTCCTGGACATCATC | + |
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Preference number: 5 (lower is better) Translates to: DIGSKISWDQETSFS*LFLLNYIENVLDII Trigger: GATGATGTCCAGGACGTTTTCAATATAGTTAAGGAGAAACAATCATGAGAATGAGGTCTCCTGGTCCCAAGAAATTTTAGACCCTATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS TCA 90 bp | AATGAGCAGAGTGACTCCCTTGAAAGGGATAAATGTATTATAGGATaGATGATGATAGTGATACTCGTCCAACTAAAGCTGAACTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: NEQSDSLERDKCIIG*MMIVILVQLKLNCA Trigger: AGCACAGTTCAGCTTTAGTTGGACGAGTATCACTATCATCATTCATCCTATAATACATTTATCCCTTTCAAGGGAGTCACTCTGCTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS GCA 90 bp | AAACATTCTTCCTCTTCAGGCATAGATATTGATAGAGACCAGTTGTaGAGTCAAACACAATCACATGATATTCTGTTTTCTAGTGACCTG | + |
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Preference number: 5 (lower is better) Translates to: KHSSSSGIDIDRDQL*SQTQSHDILFSSDL Trigger: CAGGTCACTAGAAAACAGAATATCATGTGATTGTGTTTGACTGCACAACTGGTCTCTATCAATATCTATGCCTGAAGAGGAAGAATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000512838.2 ENST00000648809.1 ENST00000651243.2 |
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| CDS TCA 90 bp | TCCTTCGCTTGTCCTCAACTTGTGCTAATGAACTGTTATCAGTATTaGCCTTACGTATTGAGTTTTCCATCTTCTGTTTTTATTAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: SFACPQLVLMNCYQY*PYVLSFPSSVFIKH Trigger: GTGCTTAATAAAAACAGAAGATGGAAAACTCAATACGTAAGGTCAATACTGATAACAGTTCATTAGCACAAGTTGAGGACAAGCGAAGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS CCA 72 bp | GTGTCACAGCTGAGTCCTCACAGTGAGCAAAACGGCTaGAACGTAGAGAGGGAGGGGCTGCCTTTGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: VSQLSPHSEQNG*NVEREGLPLLT Trigger: AGTGAGCAAAGGCAGCCCCTCCCTCTCTACGTTCCAGCCGTTTTGCTCACTGTGAGGACTCAGCTGTGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512838.2 |
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| CDS CAA 72 bp | TTTCTTCTGCCCTCAGCAAGTGCTGCACATTGTCCCTaGGAGCTAGTGCTGAGGGGGAAATGCATGCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FLLPSASAAHCP*ELVLRGKCMPL Trigger: CAGGGGCATGCATTTCCCCCTCAGCACTAGCTCCAAGGGACAATGTGCAGCACTTGCTGAGGGCAGAAGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS CCA 72 bp | GAAGACAGAAGCCTGGGGAAGTGCACTTCAGCTGCTTaGAGGACAAGGCACATTCATCCTTCGCTTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: EDRSLGKCTSAA*RTRHIHPSLVL Trigger: GAGGACAAGCGAAGGATGAATGTGCCTTGTCCTCCAAGCAGCTGAAGTGCACTTCCCCAGGCTTCTGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS TCA 72 bp | ATCCCCAGACTTTGGGAAGCCGAGGCGGGCAGATCATaGGGTCAAGAAATCAAGACCATCCTGGCCAATATG | + |
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Preference number: 6 (lower is better) Translates to: IPRLWEAEAGRS*GQEIKTILANM Trigger: CATATTGGCCAGGATGGTCTTGATTTCTTGACCTCATGATCTGCCCGCCTCGGCTTCCCAAAGTCTGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512838.2 |
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| CDS GCA 72 bp | TCTTTCTGTTCATGCATCTGTCCACAGCTCACCGAGTaGTCCTTGTGTGTCAGAGGTTTTGGCAGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SFCSCICPQLTE*SLCVRGFGRCW Trigger: CCAGCACCTGCCAAAACCTCTGACACACAAGGAGCACTCGGTGAGCTGTGGACAGATGCATGAACAGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CAA 90 bp | CCATGGGGAAACACAGCCCCTGGCCATGAGGAGTTATTCACTCAATaGAGGTCACAGACAACTCAGCAAGAGGATTTCAGGAGCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PWGNTAPGHEELFTQ*RSQTTQQEDFRSQV Trigger: GACCTGGCTCCTGAAATCCTCTTGCTGAGTTGTCTGTGACCTCAATTGAGTGAATAACTCCTCATGGCCAGGGGCTGTGTTTCCCCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CAA 90 bp | ACTCAGAAGAGAAGACAGAAGCCTGGGGAAGTGCACTTCAGCTGCTaGGAGGACAAGGCACATTCATCCTTCGCTTGTCCTCAACTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TQKRRQKPGEVHFSC*EDKAHSSFACPQLV Trigger: CACAAGTTGAGGACAAGCGAAGGATGAATGTGCCTTGTCCTCCAAGCAGCTGAAGTGCACTTCCCCAGGCTTCTGTCTTCTCTTCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS CAA 90 bp | GTCAACCTCAAGAAGACTGGGTTTTCTTTCCTAGTGCTGCTCCTTTaGCAGCTCCAGACCTGTGCGTCCTTGGATGGTCAGTTACGATGG | + |
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Preference number: 6 (lower is better) Translates to: VNLKKTGFSFLVLLL*QLQTCASLDGQLRW Trigger: CCATCGTAACTGACCATCCAAGGACGCACAGGTCTGGAGCTGCAAAAGGAGCAGCACTAGGAAAGAAAACCCAGTCTTCTTGAGGTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS GCA 72 bp | AAGAGAAGACAGAAGCCTGGGGAAGTGCACTTCAGCTaGTTGGAGGACAAGGCACATTCATCCTTCGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: KRRQKPGEVHFS*LEDKAHSSFAC Trigger: ACAAGCGAAGGATGAATGTGCCTTGTCCTCCAAGCAGCTGAAGTGCACTTCCCCAGGCTTCTGTCTTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS GCA 72 bp | ACAGTCATTGCCCACATGACTGGTCAAGGGGAACTTTaGTGTACTTGCATCCTAGGAGCACCCACTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: TVIAHMTGQGEL*CTCILGAPTFS Trigger: GCTGAAAGTGGGTGCTCCTAGGATGCAAGTACAGCAAAGTTCCCCTTGACCAGTCATGTGGGCAATGACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CCA 72 bp | TGCTGCTCCTTTTGCAGCTCCAGACCTGTGCGTCCTTaGATGGTCAGTTACGATGGAGTAGACATTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: CCSFCSSRPVRP*MVSYDGVDIRR Trigger: CCTTCTAATGTCTACTCCATCGTAACTGACCATCCAAGGACGCACAGGTCTGGAGCTGCAAAAGGAGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CAA 72 bp | CTGGAACGTAGAGAGGGAGGGGCTGCCTTTGCTCACTaGGCCCAAATTCAAAGCCATCCATCTACTGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: LERREGGAAFAH*AQIQSHPSTVL Trigger: TAAGACAGTAGATGGATGGCTTTGAATTTGGGCCAAGTGAGCAAAGGCAGCCCCTCCCTCTCTACGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512838.2 |
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| CDS CAA 72 bp | CACAGTCATTGCCCACATGACTGGTCAAGGGGAACTTaGCTGTACTTGCATCCTAGGAGCACCCACTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HSHCPHDWSRGT*LYLHPRSTHFQ Trigger: CTGAAAGTGGGTGCTCCTAGGATGCAAGTACAGCAAAGTTCCCCTTGACCAGTCATGTGGGCAATGACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CAA 72 bp | AAGAAGACTGGGTTTTCTTTCCTAGTGCTGCTCCTTTaGCAGCTCCAGACCTGTGCGTCCTTGGATGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: KKTGFSFLVLLL*QLQTCASLDGQ Trigger: CTGACCATCCAAGGACGCACAGGTCTGGAGCTGCAAAAGGAGCAGCACTAGGAAAGAAAACCCAGTCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CAA 90 bp | GCAAAACGGCTGGAACGTAGAGAGGGAGGGGCTGCCTTTGCTCACTaGGCCCAAATTCAAAGCCATCCATCTACTGTCTTAATGGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: AKRLERREGGAAFAH*AQIQSHPSTVLMVV Trigger: TACTACCATTAAGACAGTAGATGGATGGCTTTGAATTTGGGCCAAGTGAGCAAAGGCAGCCCCTCCCTCTCTACGTTCCAGCCGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512838.2 |
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| CDS CAA 90 bp | TGTCCCAGCCACAGTCATTGCCCACATGACTGGTCAAGGGGAACTTaGCTGTACTTGCATCCTAGGAGCACCCACTTTCAGCTTATTTCT | + |
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Preference number: 6 (lower is better) Translates to: CPSHSHCPHDWSRGT*LYLHPRSTHFQLIS Trigger: AGAAATAAGCTGAAAGTGGGTGCTCCTAGGATGCAAGTACAGCAAAGTTCCCCTTGACCAGTCATGTGGGCAATGACTGTGGCTGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS GCA 72 bp | GCATCAGTCCCCAGGAGCTGCATTTTAGGGAGCCTCTaGACATTCACCACTGAGGGAAACCTTTCATTTATC | + |
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Preference number: 6 (lower is better) Translates to: ASVPRSCILGSL*TFTTEGNLSFI Trigger: GATAAATGAAAGGTTTCCCTCAGTGGTGAATGTGCAGAGGCTCCCTAAAATGCAGCTCCTGGGGACTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS CCA 72 bp | TGTAAGGGAACACCAGTATGTGCACAAGGAAATCTCTaGCCCCAGGCAAACACTCAGCTGGCAGTCCAATTT | + |
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Preference number: 6 (lower is better) Translates to: CKGTPVCAQGNL*PQANTQLAVQF Trigger: AAATTGGACTGCCAGCTGAGTGTTTGCCTGGGGCCAGAGATTTCCTTGTGCACATACTGGTGTTCCCTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS TCA 72 bp | ACACAGCCCCTGGCCATGAGGAGTTATTCACTCAATTaGGGTCACAGACAACTCAGCAAGAGGATTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: TQPLAMRSYSLN*GHRQLSKRISG Trigger: TCCTGAAATCCTCTTGCTGAGTTGTCTGTGACCTCAATTGAGTGAATAACTCCTCATGGCCAGGGGCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS TCA 72 bp | ATTAGAAGGCAGCTGGCCAGCTGTCATCTTTCACAATaGGACAGTATAGTGTCCCCACACTGGAACACCTAC | + |
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Preference number: 6 (lower is better) Translates to: IRRQLASCHLSQ*DSIVSPHWNTY Trigger: GTAGGTGTTCCAGTGTGGGGACACTATACTGTCTCATTGTGAAAGATGACAGCTGGCCAGCTGCCTTCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS GCA 72 bp | CTAACAAAGAGCCTTACTATCATTTCCACAGCTGTGTaGATCAGTCCCCAGGAGCTGCATTTTAGGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LTKSLTIISTAV*ISPQELHFREP Trigger: AGGCTCCCTAAAATGCAGCTCCTGGGGACTGATGCACACAGCTGTGGAAATGATAGTAAGGCTCTTTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS CAA 72 bp | AACACAGCCCCTGGCCATGAGGAGTTATTCACTCAATaGAGGTCACAGACAACTCAGCAAGAGGATTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: NTAPGHEELFTQ*RSQTTQQEDFR Trigger: CCTGAAATCCTCTTGCTGAGTTGTCTGTGACCTCAATTGAGTGAATAACTCCTCATGGCCAGGGGCTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS TCA 72 bp | TCATCACCAGATAGTCCTGATTTGAACTCTCGGTTCTaGAGAAGTCAGGGATCCCTGTTGTATAACTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SSPDSPDLNSRF*RSQGSLLYNCP Trigger: GGGGCAGTTATACAACAGGGATCCCTGACTTCTTCAGAACCGAGAGTTCAAATCAGGACTATCTGGTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512838.2 ENST00000648809.1 ENST00000651243.2 |
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| CDS GCA 72 bp | TTAAGCACCCATTGGAAAGTAATTGCTGCAGGCACCTaGCACAGAGGCAACTTATGTGATTCATACCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LSTHWKVIAAGT*HRGNLCDSYPV Trigger: CACTGGGTATGAATCACATAAGTTGCCTCTGTGGCAGGTGCCTGCAGCAATTACTTTCCAATGGGTGCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS CCA 72 bp | TGTTACGGGAACTCTTCACATCATAAGTGTCTTCATTaGAGCCAACCCGTCTTCCTCCTTTCCCTTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CYGNSSHHKCLH*SQPVFLLSLGK Trigger: TTTCCCAAGGGAAAGGAGGAAGACGGGTTGGCTCCAATGAAGACACTTATGATGTGAAGAGTTCCCGTAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512838.2 ENST00000648809.1 ENST00000651243.2 |
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| CDS CAA 72 bp | CAGCTGCTTGGAGGACAAGGCACATTCATCCTTCGCTaGTCCTCAACTTGTGCTAATGAACTGTTATCAGTA | + |
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Preference number: 6 (lower is better) Translates to: QLLGGQGTFILR*SSTCANELLSV Trigger: TACTGATAACAGTTCATTAGCACAAGTTGAGGACAAGCGAAGGATGAATGTGCCTTGTCCTCCAAGCAGCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS CAA 90 bp | AGTGCACTTCAGCTGCTTGGAGGACAAGGCACATTCATCCTTCGCTaGTCCTCAACTTGTGCTAATGAACTGTTATCAGTATTGACCTTA | + |
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Preference number: 6 (lower is better) Translates to: SALQLLGGQGTFILR*SSTCANELLSVLTL Trigger: TAAGGTCAATACTGATAACAGTTCATTAGCACAAGTTGAGGACAAGCGAAGGATGAATGTGCCTTGTCCTCCAAGCAGCTGAAGTGCACT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS CCA 72 bp | CAGCAGCTTGGTGAGTACATTGAAGAGAAGTTAAGGTaGATGGGGTATGGTCATTTAGAAAACTACTTAACC | + |
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Preference number: 6 (lower is better) Translates to: QQLGEYIEEKLR*MGYGHLENYLT Trigger: GGTTAAGTAGTTTTCTAAATGACCATACCCCATCCACCTTAACTTCTCTTCAATGTACTCACCAAGCTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS CCA 72 bp | TGGTCATTTAGAAAACTACTTAACCAGTTTGAGGGGTaGCTTCAAGGCTTCCATTTGGCATGCTATATTAAT | + |
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Preference number: 6 (lower is better) Translates to: WSFRKLLNQFEG*LQGFHLACYIN Trigger: ATTAATATAGCATGCCAAATGGAAGCCTTGAAGCCACCCCTCAAACTGGTTAAGTAGTTTTCTAAATGACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS TCA 72 bp | AGTGACTCCCTTGAAAGGGATAAATGTATTATAGGATaGATGATGATAGTGATACTCGTCCAACTAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SDSLERDKCIIG*MMIVILVQLKL Trigger: CAGCTTTAGTTGGACGAGTATCACTATCATCATTCATCCTATAATACATTTATCCCTTTCAAGGGAGTCACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651243.2 |
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| CDS TCA 72 bp | TGTCCTCAACTTGTGCTAATGAACTGTTATCAGTATTaGCCTTACGTATTGAGTTTTCCATCTTCTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: CPQLVLMNCYQY*PYVLSFPSSVF Trigger: AAAAACAGAAGATGGAAAACTCAATACGTAAGGTCAATACTGATAACAGTTCATTAGCACAAGTTGAGGACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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| CDS CAA 72 bp | TTGTCCTCAACTTGTGCTAATGAACTGTTATCAGTATaGACCTTACGTATTGAGTTTTCCATCTTCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LSSTCANELLSV*TLRIEFSIFCF Trigger: AAAACAGAAGATGGAAAACTCAATACGTAAGGTCAATACTGATAACAGTTCATTAGCACAAGTTGAGGACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648809.1 |
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