Pregenerated sensors for LINC02193 (Homo sapiens)
Ensembl gene IDs: ENSG00000260923Ensembl transcript IDs: ENST00000568418.1, ENST00000568947.2, ENST00000569162.2, ENST00000656587.1, ENST00000658135.1, ENST00000663101.1, ENST00000663757.1, ENST00000665776.1, ENST00000668039.1, ENST00000668099.1, ENST00000669853.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATGTGCACAGAGGCTGTAGAATGTGCACTGGGGCTTGGTCTCTCTTaGTGCCCTGGAGACCAGCTGCCCCACGAAGGAAACAGAGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: MCTEAVECALGLGLS*CPGDQLPHEGNRAN Trigger: GTTGGCTCTGTTTCCTTCGTGGGGCAGCTGGTCTCCAGGGCAGCAAGAGAGACCAAGCCCCAGTGCACATTCTACAGCCTCTGTGCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568947.2 |
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| CDS GCA 90 bp | CAATGGGATATTAACAAGTCTGATGTGCACAGAGGCTGTAGAATGTaGACTGGGGCTTGGTCTCTCTTGCTGCCCTGGAGACCAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: QWDINKSDVHRGCRM*TGAWSLLLPWRPAA Trigger: GGCAGCTGGTCTCCAGGGCAGCAAGAGAGACCAAGCCCCAGTGCACATTCTACAGCCTCTGTGCACATCAGACTTGTTAATATCCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568947.2 |
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| CDS TCA 90 bp | GAGATAGCCTCCATCTTTCCACTCCTTAATCTGGGCTTGGCCATGTaGCTTACACTGGCCAATGGGATATTAACAAGTCTGATGTGCACA | + |
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Preference number: 5 (lower is better) Translates to: EIASIFPLLNLGLAM*LTLANGILTSLMCT Trigger: TGTGCACATCAGACTTGTTAATATCCCATTGGCCAGTGTAAGTCACATGGCCAAGCCCAGATTAAGGAGTGGAAAGATGGAGGCTATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568947.2 |
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| CDS CAA 90 bp | GATGTGCACAGAGGCTGTAGAATGTGCACTGGGGCTTGGTCTCTCTaGCTGCCCTGGAGACCAGCTGCCCCACGAAGGAAACAGAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: DVHRGCRMCTGAWSL*LPWRPAAPRRKQSQ Trigger: TTGGCTCTGTTTCCTTCGTGGGGCAGCTGGTCTCCAGGGCAGCAAGAGAGACCAAGCCCCAGTGCACATTCTACAGCCTCTGTGCACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568947.2 |
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| CDS GCA 72 bp | GCTGTAGAATGTGCACTGGGGCTTGGTCTCTCTTGCTaGCCTGGAGACCAGCTGCCCCACGAAGGAAACAGA | + |
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Preference number: 6 (lower is better) Translates to: AVECALGLGLSC*PGDQLPHEGNR Trigger: TCTGTTTCCTTCGTGGGGCAGCTGGTCTCCAGGGCAGCAAGAGAGACCAAGCCCCAGTGCACATTCTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568947.2 |
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| CDS CCA 72 bp | AGAATGTGCACTGGGGCTTGGTCTCTCTTGCTGCCCTaGAGACCAGCTGCCCCACGAAGGAAACAGAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: RMCTGAWSLLLP*RPAAPRRKQSQ Trigger: TTGGCTCTGTTTCCTTCGTGGGGCAGCTGGTCTCCAGGGCAGCAAGAGAGACCAAGCCCCAGTGCACATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568947.2 |
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| CDS CAA 72 bp | AGAGGCTGTAGAATGTGCACTGGGGCTTGGTCTCTCTaGCTGCCCTGGAGACCAGCTGCCCCACGAAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: RGCRMCTGAWSL*LPWRPAAPRRK Trigger: TTTCCTTCGTGGGGCAGCTGGTCTCCAGGGCAGCAAGAGAGACCAAGCCCCAGTGCACATTCTACAGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568947.2 |
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| CDS GCA 72 bp | ATTAACAAGTCTGATGTGCACAGAGGCTGTAGAATGTaGACTGGGGCTTGGTCTCTCTTGCTGCCCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: INKSDVHRGCRM*TGAWSLLLPWR Trigger: TCTCCAGGGCAGCAAGAGAGACCAAGCCCCAGTGCACATTCTACAGCCTCTGTGCACATCAGACTTGTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568947.2 |
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| CDS CCA 72 bp | AGCACAGCTTGGGAGGCCTCAGGAAATCTACAATCATaGCGGAAGACAAAGAGGAAGCAAGCCAGCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: STAWEASGNLQS*RKTKRKQASFF Trigger: GAAGAAGCTGGCTTGCTTCCTCTTTGTCTTCCGCCATGATTGTAGATTTCCTGAGGCCTCCCAAGCTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000568947.2 ENST00000569162.2 ENST00000656587.1 ENST00000658135.1 ENST00000663101.1 ENST00000663757.1 ENST00000665776.1 ENST00000668039.1 ENST00000668099.1 ENST00000669853.1 |
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| CDS CCA 72 bp | CAGCACATAGGAGTTCTGCATTGGTTTGGTCTGCATTaGTTTGGTAGTTCAGCACAGCTTGGGAGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QHIGVLHWFGLH*FGSSAQLGRPQ Trigger: CTGAGGCCTCCCAAGCTGTGCTGAACTACCAAACCAATGCAGACCAAACCAATGCAGAACTCCTATGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000568947.2 ENST00000656587.1 ENST00000663101.1 ENST00000663757.1 ENST00000665776.1 ENST00000668099.1 ENST00000669853.1 |
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| CDS CAA 72 bp | GGTTTGGTCTGCATTGGTTTGGTAGTTCAGCACAGCTaGGGAGGCCTCAGGAAATCTACAATCATGGCGGAA | + |
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Preference number: 6 (lower is better) Translates to: GLVCIGLVVQHS*GGLRKSTIMAE Trigger: TTCCGCCATGATTGTAGATTTCCTGAGGCCTCCCAAGCTGTGCTGAACTACCAAACCAATGCAGACCAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000568947.2 ENST00000656587.1 ENST00000663101.1 ENST00000663757.1 ENST00000665776.1 ENST00000668099.1 ENST00000669853.1 |
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| CDS CAA 90 bp | CAATTCCCAGTGCTGAAGAAAAGGCCAAACTCTTGGTTGTGTTCTTaGATTAGTGCCTGTGACGCAGCTTCAGGAGGTCCTGAGAACGTG | + |
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Preference number: 6 (lower is better) Translates to: QFPVLKKRPNSWLCS*ISACDAASGGPENV Trigger: CACGTTCTCAGGACCTCCTGAAGCTGCGTCACAGGCACTAATCAAAGAACACAACCAAGAGTTTGGCCTTTTCTTCAGCACTGGGAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000568418.1 ENST00000568947.2 ENST00000569162.2 ENST00000656587.1 ENST00000658135.1 ENST00000663101.1 ENST00000663757.1 ENST00000665776.1 ENST00000668039.1 ENST00000668099.1 ENST00000669853.1 |
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| CDS GCA 72 bp | CTTACACTGGCCAATGGGATATTAACAAGTCTGATGTaGACAGAGGCTGTAGAATGTGCACTGGGGCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LTLANGILTSLM*TEAVECALGLG Trigger: ACCAAGCCCCAGTGCACATTCTACAGCCTCTGTGCACATCAGACTTGTTAATATCCCATTGGCCAGTGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568947.2 |
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| CDS CAA 72 bp | GTGCTGAAGAAAAGGCCAAACTCTTGGTTGTGTTCTTaGATTAGTGCCTGTGACGCAGCTTCAGGAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VLKKRPNSWLCS*ISACDAASGGP Trigger: AGGACCTCCTGAAGCTGCGTCACAGGCACTAATCAAAGAACACAACCAAGAGTTTGGCCTTTTCTTCAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000568418.1 ENST00000568947.2 ENST00000569162.2 ENST00000656587.1 ENST00000658135.1 ENST00000663101.1 ENST00000663757.1 ENST00000665776.1 ENST00000668039.1 ENST00000668099.1 ENST00000669853.1 |
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| CDS CAA 90 bp | TTCTGCATTGGTTTGGTCTGCATTGGTTTGGTAGTTCAGCACAGCTaGGGAGGCCTCAGGAAATCTACAATCATGGCGGAAGACAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FCIGLVCIGLVVQHS*GGLRKSTIMAEDKE Trigger: CTCTTTGTCTTCCGCCATGATTGTAGATTTCCTGAGGCCTCCCAAGCTGTGCTGAACTACCAAACCAATGCAGACCAAACCAATGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000568947.2 ENST00000656587.1 ENST00000663101.1 ENST00000663757.1 ENST00000665776.1 ENST00000668099.1 ENST00000669853.1 |
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| CDS CCA 72 bp | TGCTGTCTTGTCCAAATTGTTAAGTTCAGCACAGCTTaGGAGGCCTCAGGAAATCTACAATCATGGCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: CCLVQIVKFSTA*EASGNLQSWRK Trigger: CTTCCGCCATGATTGTAGATTTCCTGAGGCCTCCCAAGCTGTGCTGAACTTAACAATTTGGACAAGACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658135.1 ENST00000668039.1 |
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| CDS CAA 72 bp | CAATTCCCAGTGCTGAAGAAAAGGCCAAACTCTTGGTaGTGTTCTTTGATTAGTGCCTGTGACGCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QFPVLKKRPNSW*CSLISACDAAS Trigger: TGAAGCTGCGTCACAGGCACTAATCAAAGAACACAACCAAGAGTTTGGCCTTTTCTTCAGCACTGGGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000568418.1 ENST00000568947.2 ENST00000569162.2 ENST00000656587.1 ENST00000658135.1 ENST00000663101.1 ENST00000663757.1 ENST00000665776.1 ENST00000668039.1 ENST00000668099.1 ENST00000669853.1 |
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| CDS CAA 72 bp | AATGTAAGACCACCATCAGCACATAGGAGTTCTGCATaGGTTTGGTCTGCATTGGTTTGGTCTTTTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: NVRPPSAHRSSA*VWSALVWSFPG Trigger: TCCAGGAAAAGACCAAACCAATGCAGACCAAACCAATGCAGAACTCCTATGTGCTGATGGTGGTCTTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000568418.1 ENST00000658135.1 ENST00000668039.1 |
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