Pregenerated sensors for LINC02189 (Homo sapiens)
Ensembl gene IDs: ENSG00000260026Ensembl transcript IDs: ENST00000563331.1, ENST00000652314.1, ENST00000653342.1, ENST00000659949.1, ENST00000660139.1, ENST00000661967.1, ENST00000667097.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTAGGGCACTGGCTGGGTGCCAATCCCGAGTTGAGTGTTGTCCGATaGAGACACCCTTGGCTGATGACCTCAGACTTGCCTCGGAACCCT | + |
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Preference number: 5 (lower is better) Translates to: VGHWLGANPELSVVR*RHPWLMTSDLPRNP Trigger: AGGGTTCCGAGGCAAGTCTGAGGTCATCAGCCAAGGGTGTCTGCATCGGACAACACTCAACTCGGGATTGGCACCCAGCCAGTGCCCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667097.1 |
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| CDS CCA 90 bp | GGTCATCCCTGTCCCTACAGTGGCATCTTGTATAGTGTAGGGCACTaGCTGGGTGCCAATCCCGAGTTGAGTGTTGTCCGATGCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: GHPCPYSGILYSVGH*LGANPELSVVRCRH Trigger: GTGTCTGCATCGGACAACACTCAACTCGGGATTGGCACCCAGCCAGTGCCCTACACTATACAAGATGCCACTGTAGGGACAGGGATGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000652314.1 ENST00000653342.1 ENST00000659949.1 ENST00000661967.1 ENST00000667097.1 |
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| CDS CCA 90 bp | AGGAAACACCAAGAAGCTAGAGAAATTCTCTTCAGAAGCCCCCTCTaGCCCACTGAGGGTCACCTTGCTAGAGGTCATCCCTGTCCCTAC | + |
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Preference number: 5 (lower is better) Translates to: RKHQEAREILFRSPL*PTEGHLARGHPCPY Trigger: GTAGGGACAGGGATGACCTCTAGCAAGGTGACCCTCAGTGGGCCAGAGGGGGCTTCTGAAGAGAATTTCTCTAGCTTCTTGGTGTTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000563331.1 ENST00000659949.1 ENST00000660139.1 ENST00000661967.1 ENST00000667097.1 |
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| CDS GCA 90 bp | ATCACATATATTGATCACGGGGCCTGTGGTGTTGATTTAGCCCGCTaGTTTGCAATAACATTCATAAGGTATTACTGGGAAAACATTAAA | + |
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Preference number: 5 (lower is better) Translates to: ITYIDHGACGVDLAR*FAITFIRYYWENIK Trigger: TTTAATGTTTTCCCAGTAATACCTTATGAATGTTATTGCAAAGCAGCGGGCTAAATCAACACCACAGGCCCCGTGATCAATATATGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563331.1 ENST00000659949.1 |
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| CDS GCA 72 bp | TGGCTGGGTGCCAATCCCGAGTTGAGTGTTGTCCGATaGAGACACCCTTGGCTGATGACCTCAGACTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: WLGANPELSVVR*RHPWLMTSDLP Trigger: AGGCAAGTCTGAGGTCATCAGCCAAGGGTGTCTGCATCGGACAACACTCAACTCGGGATTGGCACCCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652314.1 ENST00000659949.1 ENST00000667097.1 |
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| CDS GCA 72 bp | TCCTCTGAGAATCTAGCCCAGCAAATCCCAGTAGAGTaGAGACCCGGGCTTGCTAGAGGTCATCCCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSENLAQQIPVE*RPGLARGHPCP Trigger: GGGACAGGGATGACCTCTAGCAAGCCCGGGTCTGCACTCTACTGGGATTTGCTGGGCTAGATTCTCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653342.1 |
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| CDS CCA 72 bp | AATCCCGAGTTGAGTGTTGTCCGATGCAGACACCCTTaGCTGATGACCTCAGACTTGCCTCGGAACCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: NPELSVVRCRHP*LMTSDLPRNPG Trigger: GCCAGGGTTCCGAGGCAAGTCTGAGGTCATCAGCCAAGGGTGTCTGCATCGGACAACACTCAACTCGGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667097.1 |
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| CDS CAA 72 bp | CAATCCCGAGTTGAGTGTTGTCCGATGCAGACACCCTaGGCTGATGACCTCAGACTTGCCTCGGAACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QSRVECCPMQTP*ADDLRLASEPW Trigger: CCAGGGTTCCGAGGCAAGTCTGAGGTCATCAGCCAAGGGTGTCTGCATCGGACAACACTCAACTCGGGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667097.1 |
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| CDS CAA 90 bp | GGCATCTTGTATAGTGTAGGGCACTGGCTGGGTGCCAATCCCGAGTaGAGTGTTGTCCGATGCAGACACCCTTGGCTGATGACCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GILYSVGHWLGANPE*SVVRCRHPWLMTSD Trigger: GTCTGAGGTCATCAGCCAAGGGTGTCTGCATCGGACAACACTCAACTCGGGATTGGCACCCAGCCAGTGCCCTACACTATACAAGATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652314.1 ENST00000659949.1 ENST00000667097.1 |
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| CDS CAA 72 bp | TATAGTGTAGGGCACTGGCTGGGTGCCAATCCCGAGTaGAGTGTTGTCCGATGCAGACACCCTTGGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: YSVGHWLGANPE*SVVRCRHPWLM Trigger: CATCAGCCAAGGGTGTCTGCATCGGACAACACTCAACTCGGGATTGGCACCCAGCCAGTGCCCTACACTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000652314.1 ENST00000659949.1 ENST00000661967.1 ENST00000667097.1 |
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| CDS CCA 72 bp | CAAGAAGCTAGAGAAATTCTCTTCAGAAGCCCCCTCTaGCCCACTGAGGGTCACCTTGCTAGAGGTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: QEAREILFRSPL*PTEGHLARGHP Trigger: GGGATGACCTCTAGCAAGGTGACCCTCAGTGGGCCAGAGGGGGCTTCTGAAGAGAATTTCTCTAGCTTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000563331.1 ENST00000659949.1 ENST00000660139.1 ENST00000661967.1 ENST00000667097.1 |
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| CDS CAA 72 bp | ATTGATCACGGGGCCTGTGGTGTTGATTTAGCCCGCTaGCTAGAGGTCATCCCTGTCCCTACAGTGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: IDHGACGVDLAR*LEVIPVPTVAS Trigger: AGATGCCACTGTAGGGACAGGGATGACCTCTAGCAAGCGGGCTAAATCAACACCACAGGCCCCGTGATCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652314.1 |
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| CDS CAA 90 bp | GAGAAATTCTCTTCAGAAGCCCCCTCTGGCCCACTGAGGGTCACCTaGCTAGAGGTCATCCCTGTCCCTACAGTGGCATCTTGTATAGTG | + |
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Preference number: 6 (lower is better) Translates to: EKFSSEAPSGPLRVT*LEVIPVPTVASCIV Trigger: CACTATACAAGATGCCACTGTAGGGACAGGGATGACCTCTAGCAAGGTGACCCTCAGTGGGCCAGAGGGGGCTTCTGAAGAGAATTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000563331.1 ENST00000659949.1 ENST00000660139.1 ENST00000661967.1 ENST00000667097.1 |
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| CDS TCA 72 bp | CGTGGAGCGAGGAACTCAATCAATGTTGAGCTCCTCTaGGAATCTAGCCCAGCAAATCCCAGTAGAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RGARNSINVELL*ESSPANPSRVQ Trigger: CTGCACTCTACTGGGATTTGCTGGGCTAGATTCTCAGAGGAGCTCAACATTGATTGAGTTCCTCGCTCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653342.1 ENST00000667097.1 |
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| CDS CAA 90 bp | ATCACATATATTGATCACGGGGCCTGTGGTGTTGATTTAGCCCGCTaGCTAGAGGTCATCCCTGTCCCTACAGTGGCATCTTGTATAGTG | + |
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Preference number: 6 (lower is better) Translates to: ITYIDHGACGVDLAR*LEVIPVPTVASCIV Trigger: CACTATACAAGATGCCACTGTAGGGACAGGGATGACCTCTAGCAAGCGGGCTAAATCAACACCACAGGCCCCGTGATCAATATATGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652314.1 |
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| CDS CCA 72 bp | ATGCGTCACCATTTCAGGTTGTCCGAATTGTCCTTGTaGTCAGATTCACGTCAAGACTTGGGGCAACAACAC | + |
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Preference number: 6 (lower is better) Translates to: MRHHFRLSELSL*SDSRQDLGQQH Trigger: GTGTTGTTGCCCCAAGTCTTGACGTGAATCTGACCACAAGGACAATTCGGACAACCTGAAATGGTGACGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000563331.1 ENST00000652314.1 ENST00000653342.1 ENST00000659949.1 ENST00000660139.1 ENST00000661967.1 ENST00000667097.1 |
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| CDS GCA 72 bp | TCCTCTGAGAATCTAGCCCAGCAAATCCCAGTAGAGTaGAGACCCGGGCTTTGCAATAACATTCATAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: SSENLAQQIPVE*RPGLCNNIHKV Trigger: TACCTTATGAATGTTATTGCAAAGCCCGGGTCTGCACTCTACTGGGATTTGCTGGGCTAGATTCTCAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667097.1 |
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| CDS CAA 72 bp | TTTTGTAGAATGCGTCACCATTTCAGGTTGTCCGAATaGTCCTTGTGGTCAGATTCACGTCAAGACTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FCRMRHHFRLSE*SLWSDSRQDLG Trigger: CCCCAAGTCTTGACGTGAATCTGACCACAAGGACAATTCGGACAACCTGAAATGGTGACGCATTCTACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000563331.1 ENST00000652314.1 ENST00000653342.1 ENST00000659949.1 ENST00000660139.1 ENST00000661967.1 ENST00000667097.1 |
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| CDS CAA 72 bp | CAAAGATTTAACGTGGAGCGAGGAACTCAATCAATGTaGAGCTCCTCTGAGAATCTAGCCCAGCAAATCCCA | + |
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Preference number: 6 (lower is better) Translates to: QRFNVERGTQSM*SSSENLAQQIP Trigger: TGGGATTTGCTGGGCTAGATTCTCAGAGGAGCTCAACATTGATTGAGTTCCTCGCTCCACGTTAAATCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653342.1 ENST00000667097.1 |
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| CDS CAA 90 bp | TTCAGGTTGTCCGAATTGTCCTTGTGGTCAGATTCACGTCAAGACTaGGGGCAACAACACCAGGATGTAATGTCCTCATCACATATATTG | + |
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Preference number: 6 (lower is better) Translates to: FRLSELSLWSDSRQD*GQQHQDVMSSSHIL Trigger: CAATATATGTGATGAGGACATTACATCCTGGTGTTGTTGCCCCAAGTCTTGACGTGAATCTGACCACAAGGACAATTCGGACAACCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000563331.1 ENST00000652314.1 ENST00000653342.1 ENST00000659949.1 ENST00000660139.1 ENST00000661967.1 ENST00000667097.1 |
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| CDS GCA 72 bp | ATTGATCACGGGGCCTGTGGTGTTGATTTAGCCCGCTaGTTTGCAATAACATTCATAAGGTATTACTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: IDHGACGVDLAR*FAITFIRYYWE Trigger: TTCCCAGTAATACCTTATGAATGTTATTGCAAAGCAGCGGGCTAAATCAACACCACAGGCCCCGTGATCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563331.1 ENST00000659949.1 |
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| CDS CAA 90 bp | TTAATTTTCCAAAGATTTAACGTGGAGCGAGGAACTCAATCAATGTaGAGCTCCTCTGAGAATCTAGCCCAGCAAATCCCAGTAGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LIFQRFNVERGTQSM*SSSENLAQQIPVEC Trigger: GCACTCTACTGGGATTTGCTGGGCTAGATTCTCAGAGGAGCTCAACATTGATTGAGTTCCTCGCTCCACGTTAAATCTTTGGAAAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653342.1 ENST00000667097.1 |
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| CDS TCA 72 bp | ACCACAATGCAATTAACAAAACCAAGGATGTGGCATTaGCACAATTCTATTAGCTACAGACCTCATTCACGT | + |
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Preference number: 6 (lower is better) Translates to: TTMQLTKPRMWH*HNSISYRPHSR Trigger: ACGTGAATGAGGTCTGTAGCTAATAGAATTGTGTCAATGCCACATCCTTGGTTTTGTTAATTGCATTGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000652314.1 ENST00000653342.1 ENST00000659949.1 ENST00000660139.1 ENST00000661967.1 ENST00000667097.1 |
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