Pregenerated sensors for LINC02185 (Homo sapiens)
Ensembl gene IDs: ENSG00000262097Ensembl transcript IDs: ENST00000575424.2, ENST00000576797.1, ENST00000654412.1, ENST00000662675.1, ENST00000668908.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CATCCAAAGTTCCCTCGTTGCCATCTGCTGACCAGCTGGACCCACTaGCCTCAGACCAGAACCTTCCCCAAGCTTGATCTGCAGCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: HPKFPRCHLLTSWTH*PQTRTFPKLDLQPA Trigger: GGCAGGCTGCAGATCAAGCTTGGGGAAGGTTCTGGTCTGAGGTCAGTGGGTCCAGCTGGTCAGCAGATGGCAACGAGGGAACTTTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS GCA 90 bp | AACTGGCTTCTGTCATCCCAGGGAAGAGACGGGCTTCAAGCAGGCTaGAAAACCAGGCCGGCGGGCTCCGACAACAACTCTCATCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: NWLLSSQGRDGLQAG*KTRPAGSDNNSHPK Trigger: CTTTGGATGAGAGTTGTTGTCGGAGCCCGCCGGCCTGGTTTTGCAGCCTGCTTGAAGCCCGTCTCTTCCCTGGGATGACAGAAGCCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS TCA 90 bp | GCTCCGACAACAACTCTCATCCAAAGTTCCCTCGTTGCCATCTGCTaGCCAGCTGGACCCACTGACCTCAGACCAGAACCTTCCCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: APTTTLIQSSLVAIC*PAGPTDLRPEPSPS Trigger: GCTTGGGGAAGGTTCTGGTCTGAGGTCAGTGGGTCCAGCTGGTCAGCAGATGGCAACGAGGGAACTTTGGATGAGAGTTGTTGTCGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS GCA 90 bp | CAAAGCAACGAAGACAAGCGCGGATGGCCCGAGGTGGGTCCAGTCTaGTCAAACCCAGATCTGAGAGTAGTGAACAATGATCGCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: QSNEDKRGWPEVGPV*SNPDLRVVNNDRPE Trigger: CTCTGGGCGATCATTGTTCACTACTCTCAGATCTGGGTTTGAGCAGACTGGACCCACCTCGGGCCATCCGCGCTTGTCTTCGTTGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS CCA 90 bp | TCTAGAACCCATCACCGTACCCAAAGCAACGAAGACAAGCGCGGATaGCCCGAGGTGGGTCCAGTCTGCTCAAACCCAGATCTGAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: SRTHHRTQSNEDKRG*PEVGPVCSNPDLRV Trigger: TACTCTCAGATCTGGGTTTGAGCAGACTGGACCCACCTCGGGCCATCCGCGCTTGTCTTCGTTGCTTTGGGTACGGTGATGGGTTCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS TCA 90 bp | GATACCGAGCTCCCAGGCAGGGATGAGGGGCACAGCATGGAGCAGTaGCTTCTGAGAGTGTTGTGTGTCTTCATGGATTGTGCAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: DTELPGRDEGHSMEQ*LLRVLCVFMDCAIS Trigger: AGAGATTGCACAATCCATGAAGACACACAACACTCTCAGAAGTCACTGCTCCATGCTGTGCCCCTCATCCCTGCCTGGGAGCTCGGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS TCA 90 bp | GAACTGTTTTTGAGTGGCTTACAGCTATGTCCTGAGCGCTCTGAGTaGAGGCAGAGGTGCTGGTTAGCAAGGTGGGAGGCAGAGATACCG | + |
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Preference number: 5 (lower is better) Translates to: ELFLSGLQLCPERSE*RQRCWLARWEAEIP Trigger: CGGTATCTCTGCCTCCCACCTTGCTAACCAGCACCTCTGCCTTCACTCAGAGCGCTCAGGACATAGCTGTAAGCCACTCAAAAACAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS TCA 90 bp | GGTGGGTCCAGTCTGCTCAAACCCAGATCTGAGAGTAGTGAACAATaGTCGCCCAGAGCAAAATCAGGTTTGGCCGCCAGAAGCAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: GGSSLLKPRSESSEQ*SPRAKSGLAARSKG Trigger: ACCTTTGCTTCTGGCGGCCAAACCTGATTTTGCTCTGGGCGATCATTGTTCACTACTCTCAGATCTGGGTTTGAGCAGACTGGACCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS CCA 90 bp | GATCTGAGAGTAGTGAACAATGATCGCCCAGAGCAAAATCAGGTTTaGCCGCCAGAAGCAAAGGTGACTTCAGCAGCCACCCACTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: DLRVVNNDRPEQNQV*PPEAKVTSAATHSP Trigger: AGGAGAGTGGGTGGCTGCTGAAGTCACCTTTGCTTCTGGCGGCCAAACCTGATTTTGCTCTGGGCGATCATTGTTCACTACTCTCAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS CCA 90 bp | AAGGAGAGTGGGAGTTCCAAAGAAGAATCCCTTCACTCTGCTTGGTaGGGAGAAGGTAGAACAGCAAATCTTCCTGAAGGAGGGTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: KESGSSKEESLHSAW*GEGRTANLPEGGCV Trigger: AACACACCCTCCTTCAGGAAGATTTGCTGTTCTACCTTCTCCCCACCAAGCAGAGTGAAGGGATTCTTCTTTGGAACTCCCACTCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000575424.2 ENST00000662675.1 |
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| CDS CCA 90 bp | GTGGTTTGCAATGTCGACTTTCACTCTAAGGCAATCAGGTCCAGATaGCAAAGGGAAACCCTCTTGTCACCAGCTCTTGGGCATTTAAAA | + |
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Preference number: 5 (lower is better) Translates to: VVCNVDFHSKAIRSR*QRETLLSPALGHLK Trigger: TTTTAAATGCCCAAGAGCTGGTGACAAGAGGGTTTCCCTTTGCCATCTGGACCTGATTGCCTTAGAGTGAAAGTCGACATTGCAAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS GCA 90 bp | CATGGAGCAGTGACTTCTGAGAGTGTTGTGTGTCTTCATGGATTGTaGAATCTCTATCCGGAAATTGATCAATTGCAATCAAAAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: HGAVTSESVVCLHGL*NLYPEIDQLQSKAV Trigger: CACTGCTTTTGATTGCAATTGATCAATTTCCGGATAGAGATTGCACAATCCATGAAGACACACAACACTCTCAGAAGTCACTGCTCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS GCA 90 bp | CCTTTCCAATCTGGATACCTCTTCTTTTCTCTTGCCTACTTGTTCTaGCTAGAATTTTCCAGAACAATGTTGAATAGCAGTGGCAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: PFQSGYLFFSLAYLF*LEFSRTMLNSSGSS Trigger: ACTACTGCCACTGCTATTCAACATTGTTCTGGAAAATTCTAGGCAGAACAAGTAGGCAAGAGAAAAGAAGAGGTATCCAGATTGGAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000575424.2 ENST00000654412.1 |
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| CDS GCA 90 bp | AGGGAAGTTGCTGAGTCATATGGTAACTCTAAGTTTTTGAGAAACTaGCAAACAGTTTTTCAAAGCTCTGTGCTACTTTACATTCCCACC | + |
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Preference number: 5 (lower is better) Translates to: REVAESYGNSKFLRN*QTVFQSSVLLYIPT Trigger: GGTGGGAATGTAAAGTAGCACAGAGCTTTGAAAAACTGTTTGGCAGTTTCTCAAAAACTTAGAGTTACCATATGACTCAGCAACTTCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS CCA 90 bp | AATTCGTACACCGTACAAGTCACCAATTTAAAATGTACAAGTCAATaGCTTTCAGTAAATTCAGAGTTGTACTGCCATCACTACAATCAA | + |
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Preference number: 5 (lower is better) Translates to: NSYTVQVTNLKCTSQ*LSVNSELYCHHYNQ Trigger: TTGATTGTAGTGATGGCAGTACAACTCTGAATTTACTGAAAGCCATTGACTTGTACATTTTAAATTGGTGACTTGTACGGTGTACGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS TCA 72 bp | GACCCACTGACCTCAGACCAGAACCTTCCCCAAGCTTaGTCTGCAGCCTGCCACCTGGGGAACCCACTTCGC | + |
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Preference number: 6 (lower is better) Translates to: DPLTSDQNLPQA*SAACHLGNPLR Trigger: GCGAAGTGGGTTCCCCAGGTGGCAGGCTGCAGATCAAGCTTGGGGAAGGTTCTGGTCTGAGGTCAGTGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS GCA 72 bp | CTGTCATCCCAGGGAAGAGACGGGCTTCAAGCAGGCTaGAAAACCAGGCCGGCGGGCTCCGACAACAACTCT | + |
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Preference number: 6 (lower is better) Translates to: LSSQGRDGLQAG*KTRPAGSDNNS Trigger: AGAGTTGTTGTCGGAGCCCGCCGGCCTGGTTTTGCAGCCTGCTTGAAGCCCGTCTCTTCCCTGGGATGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS CAA 72 bp | GGACCCACTGACCTCAGACCAGAACCTTCCCCAAGCTaGATCTGCAGCCTGCCACCTGGGGAACCCACTTCG | + |
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Preference number: 6 (lower is better) Translates to: GPTDLRPEPSPS*ICSLPPGEPTS Trigger: CGAAGTGGGTTCCCCAGGTGGCAGGCTGCAGATCAAGCTTGGGGAAGGTTCTGGTCTGAGGTCAGTGGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS CAA 90 bp | CAGGCCGGCGGGCTCCGACAACAACTCTCATCCAAAGTTCCCTCGTaGCCATCTGCTGACCAGCTGGACCCACTGACCTCAGACCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: QAGGLRQQLSSKVPS*PSADQLDPLTSDQN Trigger: GTTCTGGTCTGAGGTCAGTGGGTCCAGCTGGTCAGCAGATGGCAACGAGGGAACTTTGGATGAGAGTTGTTGTCGGAGCCCGCCGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS TCA 72 bp | GCAGCCACCCACTCTCCTCAGCCTCGTGTCCCACGGTaGACACTGATGAACTGGCTTCTGTCATCCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: AATHSPQPRVPR*TLMNWLLSSQG Trigger: TCCCTGGGATGACAGAAGCCAGTTCATCAGTGTTCACCGTGGGACACGAGGCTGAGGAGAGTGGGTGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS CCA 72 bp | CATCACCGTACCCAAAGCAACGAAGACAAGCGCGGATaGCCCGAGGTGGGTCCAGTCTGCTCAAACCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HHRTQSNEDKRG*PEVGPVCSNPD Trigger: ATCTGGGTTTGAGCAGACTGGACCCACCTCGGGCCATCCGCGCTTGTCTTCGTTGCTTTGGGTACGGTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS GCA 72 bp | TACATCTTCTTTATCTCTCTCAAGCTACCTAGCATTTaGCCCTGCCACGACTCCCCCTTCCACCCCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: YIFFISLKLPSI*PCHDSPFHPCP Trigger: GGGGCAGGGGTGGAAGGGGGAGTCGTGGCAGGGGCAAATGCTAGGTAGCTTGAGAGAGATAAAGAAGATGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662675.1 |
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| CDS TCA 72 bp | CTCCCAGGCAGGGATGAGGGGCACAGCATGGAGCAGTaGCTTCTGAGAGTGTTGTGTGTCTTCATGGATTGT | + |
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Preference number: 6 (lower is better) Translates to: LPGRDEGHSMEQ*LLRVLCVFMDC Trigger: ACAATCCATGAAGACACACAACACTCTCAGAAGTCACTGCTCCATGCTGTGCCCCTCATCCCTGCCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS TCA 72 bp | ACAACTCTCATCCAAAGTTCCCTCGTTGCCATCTGCTaGCCAGCTGGACCCACTGACCTCAGACCAGAACCT | + |
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Preference number: 6 (lower is better) Translates to: TTLIQSSLVAIC*PAGPTDLRPEP Trigger: AGGTTCTGGTCTGAGGTCAGTGGGTCCAGCTGGTCAGCAGATGGCAACGAGGGAACTTTGGATGAGAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS GCA 72 bp | GAAGACAAGCGCGGATGGCCCGAGGTGGGTCCAGTCTaGTCAAACCCAGATCTGAGAGTAGTGAACAATGAT | + |
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Preference number: 6 (lower is better) Translates to: EDKRGWPEVGPV*SNPDLRVVNND Trigger: ATCATTGTTCACTACTCTCAGATCTGGGTTTGAGCAGACTGGACCCACCTCGGGCCATCCGCGCTTGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS CCA 72 bp | GTAGTGAACAATGATCGCCCAGAGCAAAATCAGGTTTaGCCGCCAGAAGCAAAGGTGACTTCAGCAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: VVNNDRPEQNQV*PPEAKVTSAAT Trigger: GGTGGCTGCTGAAGTCACCTTTGCTTCTGGCGGCCAAACCTGATTTTGCTCTGGGCGATCATTGTTCACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS CAA 90 bp | GGATGCTCTAAGGCAATCAGGTCCAGATGGCAAAGGGAAACCCTCTaGTCACCAGCTCTTGGGCATTTAAAAACAGCATGGCAGGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: GCSKAIRSRWQRETL*SPALGHLKTAWQVA Trigger: CGCAACCTGCCATGCTGTTTTTAAATGCCCAAGAGCTGGTGACAAGAGGGTTTCCCTTTGCCATCTGGACCTGATTGCCTTAGAGCATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000575424.2 ENST00000662675.1 |
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| CDS CAA 90 bp | CAAGCCTCTAAGGCAATCAGGTCCAGATGGCAAAGGGAAACCCTCTaGTCACCAGCTCTTGGGCATTTAAAAACAGCATGGCAGGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: QASKAIRSRWQRETL*SPALGHLKTAWQVA Trigger: CGCAACCTGCCATGCTGTTTTTAAATGCCCAAGAGCTGGTGACAAGAGGGTTTCCCTTTGCCATCTGGACCTGATTGCCTTAGAGGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS GCA 72 bp | CTTTTCTCTCCGGGTCTCCTCCACACTTGGAGCTTATaGATCCAGAGACTAGGCTGGCTGGTTCATCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: LFSPGLLHTWSL*IQRLGWLVHLL Trigger: CAAAAGATGAACCAGCCAGCCTAGTCTCTGGATGCATAAGCTCCAAGTGTGGAGGAGACCCGGAGAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000575424.2 ENST00000576797.1 ENST00000654412.1 ENST00000662675.1 ENST00000668908.1 |
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| CDS TCA 72 bp | AGTCTGCTCAAACCCAGATCTGAGAGTAGTGAACAATaGTCGCCCAGAGCAAAATCAGGTTTGGCCGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SLLKPRSESSEQ*SPRAKSGLAAR Trigger: TCTGGCGGCCAAACCTGATTTTGCTCTGGGCGATCATTGTTCACTACTCTCAGATCTGGGTTTGAGCAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS CAA 90 bp | TTTACCTCTAAGGCAATCAGGTCCAGATGGCAAAGGGAAACCCTCTaGTCACCAGCTCTTGGGCATTTAAAAACAGCATGGCAGGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: FTSKAIRSRWQRETL*SPALGHLKTAWQVA Trigger: CGCAACCTGCCATGCTGTTTTTAAATGCCCAAGAGCTGGTGACAAGAGGGTTTCCCTTTGCCATCTGGACCTGATTGCCTTAGAGGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS CAA 90 bp | TTTCACTCTAAGGCAATCAGGTCCAGATGGCAAAGGGAAACCCTCTaGTCACCAGCTCTTGGGCATTTAAAAACAGCATGGCAGGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: FHSKAIRSRWQRETL*SPALGHLKTAWQVA Trigger: CGCAACCTGCCATGCTGTTTTTAAATGCCCAAGAGCTGGTGACAAGAGGGTTTCCCTTTGCCATCTGGACCTGATTGCCTTAGAGTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS GCA 72 bp | TGCGTTGAATGCTGGAGGGGTACATTTCATGTAAGTTaGCTGCATCATCGACAATTCTCTCACGTACTGGTG | + |
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Preference number: 6 (lower is better) Translates to: CVECWRGTFHVS*LHHRQFSHVLV Trigger: CACCAGTACGTGAGAGAATTGTCGATGATGCAGGCAACTTACATGAAATGTACCCCTCCAGCATTCAACGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS GCA 72 bp | ATAGGAGCTGGAAATCTGGGCTCTTTTTCAGGCCTCTaGCATGAGGCACTGTATCCTTGTTCCAACTCAATT | + |
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Preference number: 6 (lower is better) Translates to: IGAGNLGSFSGL*HEALYPCSNSI Trigger: AATTGAGTTGGAACAAGGATACAGTGCCTCATGGCAGAGGCCTGAAAAAGAGCCCAGATTTCCAGCTCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS CAA 90 bp | ACTTGGAGCTTATGCATCCAGAGACTAGGCTGGCTGGTTCATCTTTaGCCTTCACAATCCTTCATGTTTAATTGCGTCTACTTCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TWSLCIQRLGWLVHL*PSQSFMFNCVYFCL Trigger: GAGGCAGAAGTAGACGCAATTAAACATGAAGGATTGTGAAGGCAAAAGATGAACCAGCCAGCCTAGTCTCTGGATGCATAAGCTCCAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000575424.2 ENST00000654412.1 ENST00000662675.1 ENST00000668908.1 |
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| CDS GCA 72 bp | CAACAACGTGAGTTTTATCCACGTGTCACTGTGGTTTaGAATGTCGACTTTCACTCTAAGGCAATCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QQREFYPRVTVV*NVDFHSKAIRS Trigger: GGACCTGATTGCCTTAGAGTGAAAGTCGACATTGCAAACCACAGTGACACGTGGATAAAACTCACGTTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS CAA 90 bp | CACCTCTCACTCCTCTGGGAATTGCTAGGATTTAGGAGGCCAGTATaGAACTTGAGATTTCAAGAACTGTTTTTGAGTGGCTTACAGCTA | + |
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Preference number: 6 (lower is better) Translates to: HLSLLWELLGFRRPV*NLRFQELFLSGLQL Trigger: TAGCTGTAAGCCACTCAAAAACAGTTCTTGAAATCTCAAGTTCAATACTGGCCTCCTAAATCCTAGCAATTCCCAGAGGAGTGAGAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS TCA 72 bp | GTTGCCTGCATCATCGACAATTCTCTCACGTACTGGTaGGTCTGCCACTCTAAATGTGTAAATACCGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: VACIIDNSLTYW*VCHSKCVNTVY Trigger: ATAAACGGTATTTACACATTTAGAGTGGCAGACTCACCAGTACGTGAGAGAATTGTCGATGATGCAGGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668908.1 |
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| CDS GCA 72 bp | CAACAACGTGAGTTTTATCCACGTGTCACTGTGGTTTaGAATGTCGACTTTCACAGAGGGCTTTTAGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: QQREFYPRVTVV*NVDFHRGLLAK Trigger: TTTTGCTAAAAGCCCTCTGTGAAAGTCGACATTGCAAACCACAGTGACACGTGGATAAAACTCACGTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575424.2 |
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| CDS CAA 90 bp | CAGCATGGAGCAGTGACTTCTGAGAGTGTTGTGTGTCTTCATGGATaGTGCAATCTCTATCCGGAAATTGATCAATTGCAATCAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: QHGAVTSESVVCLHG*CNLYPEIDQLQSKA Trigger: TGCTTTTGATTGCAATTGATCAATTTCCGGATAGAGATTGCACAATCCATGAAGACACACAACACTCTCAGAAGTCACTGCTCCATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS CAA 90 bp | TCACTCCTCTGGGAATTGCTAGGATTTAGGAGGCCAGTATTGAACTaGAGATTTCAAGAACTGTTTTTGAGTGGCTTACAGCTATGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLLWELLGFRRPVLN*RFQELFLSGLQLCP Trigger: AGGACATAGCTGTAAGCCACTCAAAAACAGTTCTTGAAATCTCAAGTTCAATACTGGCCTCCTAAATCCTAGCAATTCCCAGAGGAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS CAA 90 bp | CACCCTAGTGGGTGTGAAGTGGTATCTCATCATCTCATCATGGTTTaGATTTGCTTTTCCCTGATGGCAAATGATGTTGAGCATCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: HPSGCEVVSHHLIMV*ICFSLMANDVEHLF Trigger: GAAAAGATGCTCAACATCATTTGCCATCAGGGAAAAGCAAATCAAAACCATGATGAGATGATGAGATACCACTTCACACCCACTAGGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS GCA 72 bp | GTGACTTCTGAGAGTGTTGTGTGTCTTCATGGATTGTaGAATCTCTATCCGGAAATTGATCAATTGCAATCA | + |
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Preference number: 6 (lower is better) Translates to: VTSESVVCLHGL*NLYPEIDQLQS Trigger: TGATTGCAATTGATCAATTTCCGGATAGAGATTGCACAATCCATGAAGACACACAACACTCTCAGAAGTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS CAA 72 bp | CTACTCCGTTGTCCTACCACCATATTTAAAACAGAATaGTGTTGGCTGCCTCGTAGAAAATCAATTGATCAG | + |
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Preference number: 6 (lower is better) Translates to: LLRCPTTIFKTE*CWLPRRKSIDQ Trigger: CTGATCAATTGATTTTCTACGAGGCAGCCAACACAATTCTGTTTTAAATATGGTGGTAGGACAACGGAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000575424.2 ENST00000654412.1 |
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| CDS CAA 90 bp | ATACCTACGAGGGAAGTTGCTGAGTCATATGGTAACTCTAAGTTTTaGAGAAACTGCCAAACAGTTTTTCAAAGCTCTGTGCTACTTTAC | + |
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Preference number: 6 (lower is better) Translates to: IPTREVAESYGNSKF*RNCQTVFQSSVLLY Trigger: GTAAAGTAGCACAGAGCTTTGAAAAACTGTTTGGCAGTTTCTCAAAAACTTAGAGTTACCATATGACTCAGCAACTTCCCTCGTAGGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS TCA 72 bp | GTGTCTTCATGGATTGTGCAATCTCTATCCGGAAATTaGTCAATTGCAATCAAAAGCAGTGGCACCAATTTA | + |
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Preference number: 6 (lower is better) Translates to: VSSWIVQSLSGN*SIAIKSSGTNL Trigger: TAAATTGGTGCCACTGCTTTTGATTGCAATTGATCAATTTCCGGATAGAGATTGCACAATCCATGAAGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS GCA 72 bp | GAAGTGGTATCTCATCATCTCATCATGGTTTTGATTTaGTTTTCCCTGATGGCAAATGATGTTGAGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: EVVSHHLIMVLI*FSLMANDVEHL Trigger: AAGATGCTCAACATCATTTGCCATCAGGGAAAAGCAAATCAAAACCATGATGAGATGATGAGATACCACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS CAA 72 bp | TGTGTCTTCATGGATTGTGCAATCTCTATCCGGAAATaGATCAATTGCAATCAAAAGCAGTGGCACCAATTT | + |
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Preference number: 6 (lower is better) Translates to: CVFMDCAISIRK*INCNQKQWHQF Trigger: AAATTGGTGCCACTGCTTTTGATTGCAATTGATCAATTTCCGGATAGAGATTGCACAATCCATGAAGACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS CAA 72 bp | AGGGAAGTTGCTGAGTCATATGGTAACTCTAAGTTTTaGAGAAACTGCCAAACAGTTTTTCAAAGCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: REVAESYGNSKF*RNCQTVFQSSV Trigger: CACAGAGCTTTGAAAAACTGTTTGGCAGTTTCTCAAAAACTTAGAGTTACCATATGACTCAGCAACTTCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS CCA 72 bp | CGTTGTCCTACCACCATATTTAAAACAGAATTGTGTTaGCTGCCTCGTAGAAAATCAATTGATCAGAAATGT | + |
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Preference number: 6 (lower is better) Translates to: RCPTTIFKTELC*LPRRKSIDQKC Trigger: ACATTTCTGATCAATTGATTTTCTACGAGGCAGCCAACACAATTCTGTTTTAAATATGGTGGTAGGACAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000575424.2 ENST00000654412.1 |
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| CDS CAA 72 bp | TTCCAATCTGGATACCTCTTCTTTTCTCTTGCCTACTaGTTCTGCCTAGAATTTTCCAGAACAATGTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: FQSGYLFFSLAY*FCLEFSRTMLN Trigger: ATTCAACATTGTTCTGGAAAATTCTAGGCAGAACAAGTAGGCAAGAGAAAAGAAGAGGTATCCAGATTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000575424.2 ENST00000654412.1 |
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| CDS CAA 90 bp | AGAGTGTTGTGTGTCTTCATGGATTGTGCAATCTCTATCCGGAAATaGATCAATTGCAATCAAAAGCAGTGGCACCAATTTATAATCTTT | + |
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Preference number: 6 (lower is better) Translates to: RVLCVFMDCAISIRK*INCNQKQWHQFIIF Trigger: AAAGATTATAAATTGGTGCCACTGCTTTTGATTGCAATTGATCAATTTCCGGATAGAGATTGCACAATCCATGAAGACACACAACACTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576797.1 |
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| CDS TCA 72 bp | TTGCTTATGCTTTGGGTATCATATCTTAGAATCCATTaGCTAATCCAAGGTCATGAAGATTTCCTCCTATGT | + |
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Preference number: 6 (lower is better) Translates to: LLMLWVSYLRIH*LIQGHEDFLLC Trigger: ACATAGGAGGAAATCTTCATGACCTTGGATTAGTCAATGGATTCTAAGATATGATACCCAAAGCATAAGCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS CCA 72 bp | AATTCCACAGATGGAATGCCATTTATAATGGAATCATaGACCTTTGAATCTGACTTCCTTCACTTAACATCA | + |
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Preference number: 6 (lower is better) Translates to: NSTDGMPFIMES*TFESDFLHLTS Trigger: TGATGTTAAGTGAAGGAAGTCAGATTCAAAGGTCCATGATTCCATTATAAATGGCATTCCATCTGTGGAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS CCA 72 bp | GAAAATCAATTGATCAGAAATGTGAAGGTTTATTTCTaGACTGTCAAGCCTAGTCAAGTGATCTATATGTCT | + |
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Preference number: 6 (lower is better) Translates to: ENQLIRNVKVYF*TVKPSQVIYMS Trigger: AGACATATAGATCACTTGACTAGGCTTGACAGTCCAGAAATAAACCTTCACATTTCTGATCAATTGATTTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000575424.2 ENST00000654412.1 |
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| CDS CAA 72 bp | CTTTTCAAGTGTTTATCGGCCATTTATTTATCTTCTTaGGAGAAACGTCTATTCAGATCCTTTGCCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LFKCLSAIYLSS*EKRLFRSFACF Trigger: AAAACAGGCAAAGGATCTGAATAGACGTTTCTCCAAAGAAGATAAATAAATGGCCGATAAACACTTGAAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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| CDS CAA 72 bp | AAATGTACAAGTCAATGGCTTTCAGTAAATTCAGAGTaGTACTGCCATCACTACAATCAATTTCAGAACACT | + |
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Preference number: 6 (lower is better) Translates to: KCTSQWLSVNSE*YCHHYNQFQNT Trigger: AGTGTTCTGAAATTGATTGTAGTGATGGCAGTACAACTCTGAATTTACTGAAAGCCATTGACTTGTACATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654412.1 |
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