Pregenerated sensors for LINC02183 (Homo sapiens)
Ensembl gene IDs: ENSG00000283304Ensembl transcript IDs: ENST00000637822.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATGAGATTCTCCCCATCGTGGGCAGAAGCCCGACGCCACGGTGTTTaGAATCATGCCTTCAGCCCTTTTCATGAGATCACACCGACGAGA | + |
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Preference number: 5 (lower is better) Translates to: MRFSPSWAEARRHGV*NHAFSPFHEITPTR Trigger: TCTCGTCGGTGTGATCTCATGAAAAGGGCTGAAGGCATGATTGCAAACACCGTGGCGTCGGGCTTCTGCCCACGATGGGGAGAATCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 90 bp | ATTCACGGCTGCCACTTCACACACAAAAGGTGGGAAAAGGTGCAGTaGGCCTTCCAGTCCTATTGGAGTGTAACACAGACCCACCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: IHGCHFTHKRWEKVQ*AFQSYWSVTQTHPE Trigger: CTCAGGGTGGGTCTGTGTTACACTCCAATAGGACTGGAAGGCTCACTGCACCTTTTCCCACCTTTTGTGTGTGAAGTGGCAGCCGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CCA 90 bp | CATTTTATCCACCTGAGATTTGATCTGATGAGATTCTCCCCATCGTaGGCAGAAGCCCGACGCCACGGTGTTTGCAATCATGCCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: HFIHLRFDLMRFSPS*AEARRHGVCNHAFS Trigger: GCTGAAGGCATGATTGCAAACACCGTGGCGTCGGGCTTCTGCCCACGATGGGGAGAATCTCATCAGATCAAATCTCAGGTGGATAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 90 bp | AGCCCGACGCCACGGTGTTTGCAATCATGCCTTCAGCCCTTTTCATaGGATCACACCGACGAGATGAGTGGTTCCACTTGTGATTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: SPTPRCLQSCLQPFS*DHTDEMSGSTCDFS Trigger: TGAAAAATCACAAGTGGAACCACTCATCTCGTCGGTGTGATCTCATGAAAAGGGCTGAAGGCATGATTGCAAACACCGTGGCGTCGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 90 bp | AGTCTGCTGAACACTGCTTATCTGAAGGGCATGTTTGCAGCACTCTaGGTTTGCAGTAGATTACAGCACCTTCCGGCCTCTAGCATTAGA | + |
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Preference number: 5 (lower is better) Translates to: SLLNTAYLKGMFAAL*VCSRLQHLPASSIR Trigger: TCTAATGCTAGAGGCCGGAAGGTGCTGTAATCTACTGCAAACTCAGAGTGCTGCAAACATGCCCTTCAGATAAGCAGTGTTCAGCAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 90 bp | AGCTTTGGTGACCATCTCTGCCATCTCAAGATTGCTGTGTTTTGCTaGACGGGGAGGGCCATCCAGGAATTCAATGTCAGATTGTCAATC | + |
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Preference number: 5 (lower is better) Translates to: SFGDHLCHLKIAVFC*TGRAIQEFNVRLSI Trigger: GATTGACAATCTGACATTGAATTCCTGGATGGCCCTCCCCGTTCAGCAAAACACAGCAATCTTGAGATGGCAGAGATGGTCACCAAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 90 bp | TTCCTGCGTGTGGCTGATTACGATGCTCTGCTCTTTGCTATCAGTTaGAAGTCAGCTTGTGCGATAACATTCTGCGTCCTAATGAAATTC | + |
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Preference number: 5 (lower is better) Translates to: FLRVADYDALLFAIS*KSACAITFCVLMKF Trigger: GAATTTCATTAGGACGCAGAATGTTATCGCACAAGCTGACTTTCAACTGATAGCAAAGAGCAGAGCATCGTAATCAGCCACACGCAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CCA 90 bp | AAGCATGGTGTAATTTACGGCAACATTTGTCCATTTTCCTGCGTGTaGCTGATTACGATGCTCTGCTCTTTGCTATCAGTTGAAAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: KHGVIYGNICPFSCV*LITMLCSLLSVESQ Trigger: CTGACTTTCAACTGATAGCAAAGAGCAGAGCATCGTAATCAGCCACACGCAGGAAAATGGACAAATGTTGCCGTAAATTACACCATGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS GCA 90 bp | CATTACAAGCATGGTGTAATTTACGGCAACATTTGTCCATTTTCCTaGGTGTGGCTGATTACGATGCTCTGCTCTTTGCTATCAGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: HYKHGVIYGNICPFS*VWLITMLCSLLSVE Trigger: TTCAACTGATAGCAAAGAGCAGAGCATCGTAATCAGCCACACGCAGGAAAATGGACAAATGTTGCCGTAAATTACACCATGCTTGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CCA 90 bp | AATTTCGAGGAGGTCAATCACTCTACAGTAACTGCATTACAAGCATaGTGTAATTTACGGCAACATTTGTCCATTTTCCTGCGTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: NFEEVNHSTVTALQA*CNLRQHLSIFLRVA Trigger: AGCCACACGCAGGAAAATGGACAAATGTTGCCGTAAATTACACCATGCTTGTAATGCAGTTACTGTAGAGTGATTGACCTCCTCGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 90 bp | ATAACATTCTGCGTCCTAATGAAATTCATTTGCAGTACAAAAATTTaGGTGAATCCAACAAGGGCTGTTACAGGCCTTAATGGCATTCTA | + |
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Preference number: 5 (lower is better) Translates to: ITFCVLMKFICSTKI*VNPTRAVTGLNGIL Trigger: TAGAATGCCATTAAGGCCTGTAACAGCCCTTGTTGGATTCACTCAAATTTTTGTACTGCAAATGAATTTCATTAGGACGCAGAATGTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS GCA 72 bp | TCCCCATCGTGGGCAGAAGCCCGACGCCACGGTGTTTaGAATCATGCCTTCAGCCCTTTTCATGAGATCACA | + |
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Preference number: 6 (lower is better) Translates to: SPSWAEARRHGV*NHAFSPFHEIT Trigger: TGTGATCTCATGAAAAGGGCTGAAGGCATGATTGCAAACACCGTGGCGTCGGGCTTCTGCCCACGATGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CAA 72 bp | TGGCCAGCTTTGGTGACCATCTCTGCCATCTCAAGATaGCTGTGTTTTGCTGAACGGGGAGGGCCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: WPALVTISAISR*LCFAERGGPSR Trigger: CCTGGATGGCCCTCCCCGTTCAGCAAAACACAGCAATCTTGAGATGGCAGAGATGGTCACCAAAGCTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CCA 72 bp | CACCTGAGATTTGATCTGATGAGATTCTCCCCATCGTaGGCAGAAGCCCGACGCCACGGTGTTTGCAATCAT | + |
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Preference number: 6 (lower is better) Translates to: HLRFDLMRFSPS*AEARRHGVCNH Trigger: ATGATTGCAAACACCGTGGCGTCGGGCTTCTGCCCACGATGGGGAGAATCTCATCAGATCAAATCTCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CAA 72 bp | GGAGTAGCGTGGAGTTGCTGGATTACGGCAAACAGGTaGAGTCGCAGTGCCAAGTCTGCTGAACACTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: GVAWSCWITANR*SRSAKSAEHCL Trigger: TAAGCAGTGTTCAGCAGACTTGGCACTGCGACTCAACCTGTTTGCCGTAATCCAGCAACTCCACGCTACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 72 bp | GACCATCTCTGCCATCTCAAGATTGCTGTGTTTTGCTaGACGGGGAGGGCCATCCAGGAATTCAATGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DHLCHLKIAVFC*TGRAIQEFNVR Trigger: TCTGACATTGAATTCCTGGATGGCCCTCCCCGTTCAGCAAAACACAGCAATCTTGAGATGGCAGAGATGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS GCA 72 bp | AACAGGTTGAGTCGCAGTGCCAAGTCTGCTGAACACTaGTTATCTGAAGGGCATGTTTGCAGCACTCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: NRLSRSAKSAEH*LSEGHVCSTLS Trigger: ACTCAGAGTGCTGCAAACATGCCCTTCAGATAAGCAGTGTTCAGCAGACTTGGCACTGCGACTCAACCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 72 bp | AACACTGCTTATCTGAAGGGCATGTTTGCAGCACTCTaGGTTTGCAGTAGATTACAGCACCTTCCGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: NTAYLKGMFAAL*VCSRLQHLPAS Trigger: AGAGGCCGGAAGGTGCTGTAATCTACTGCAAACTCAGAGTGCTGCAAACATGCCCTTCAGATAAGCAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS GCA 72 bp | TGTCCATTTTCCTGCGTGTGGCTGATTACGATGCTCTaGTCTTTGCTATCAGTTGAAAGTCAGCTTGTGCGA | + |
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Preference number: 6 (lower is better) Translates to: CPFSCVWLITML*SLLSVESQLVR Trigger: TCGCACAAGCTGACTTTCAACTGATAGCAAAGAGCAGAGCATCGTAATCAGCCACACGCAGGAAAATGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 72 bp | GTGGCTGATTACGATGCTCTGCTCTTTGCTATCAGTTaGAAGTCAGCTTGTGCGATAACATTCTGCGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: VADYDALLFAIS*KSACAITFCVL Trigger: TAGGACGCAGAATGTTATCGCACAAGCTGACTTTCAACTGATAGCAAAGAGCAGAGCATCGTAATCAGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 72 bp | GCCTTCAGCCCTTTTCATGAGATCACACCGACGAGATaGGTGGTTCCACTTGTGATTTTTCAACTCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: AFSPFHEITPTR*VVPLVIFQLFD Trigger: ATCAAAGAGTTGAAAAATCACAAGTGGAACCACTCATCTCGTCGGTGTGATCTCATGAAAAGGGCTGAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS GCA 72 bp | CATGGTGTAATTTACGGCAACATTTGTCCATTTTCCTaGGTGTGGCTGATTACGATGCTCTGCTCTTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: HGVIYGNICPFS*VWLITMLCSLL Trigger: TAGCAAAGAGCAGAGCATCGTAATCAGCCACACGCAGGAAAATGGACAAATGTTGCCGTAAATTACACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS TCA 72 bp | TTTACGGCAACATTTGTCCATTTTCCTGCGTGTGGCTaGTTACGATGCTCTGCTCTTTGCTATCAGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: FTATFVHFPACG*LRCSALCYQLK Trigger: TTTCAACTGATAGCAAAGAGCAGAGCATCGTAATCAGCCACACGCAGGAAAATGGACAAATGTTGCCGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS GCA 72 bp | CAGATTGTCAATCAAAAGGCACTTGTAGGATGTCAGTaGACTTCCTGTCCTTCAGCTTCTTGCAAGGATTTT | + |
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Preference number: 6 (lower is better) Translates to: QIVNQKALVGCQ*TSCPSASCKDF Trigger: AAAATCCTTGCAAGAAGCTGAAGGACAGGAAGTGCACTGACATCCTACAAGTGCCTTTTGATTGACAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CAA 72 bp | ACTGCATTACAAGCATGGTGTAATTTACGGCAACATTaGTCCATTTTCCTGCGTGTGGCTGATTACGATGCT | + |
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Preference number: 6 (lower is better) Translates to: TALQAWCNLRQH*SIFLRVADYDA Trigger: AGCATCGTAATCAGCCACACGCAGGAAAATGGACAAATGTTGCCGTAAATTACACCATGCTTGTAATGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CAA 90 bp | TCTACAGTAACTGCATTACAAGCATGGTGTAATTTACGGCAACATTaGTCCATTTTCCTGCGTGTGGCTGATTACGATGCTCTGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: STVTALQAWCNLRQH*SIFLRVADYDALLF Trigger: AAAGAGCAGAGCATCGTAATCAGCCACACGCAGGAAAATGGACAAATGTTGCCGTAAATTACACCATGCTTGTAATGCAGTTACTGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CAA 72 bp | CGATGCTCTGCTCTTTGCTATCAGTTGAAAGTCAGCTaGTGCGATAACATTCTGCGTCCTAATGAAATTCAT | + |
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Preference number: 6 (lower is better) Translates to: RCSALCYQLKVS*CDNILRPNEIH Trigger: ATGAATTTCATTAGGACGCAGAATGTTATCGCACAAGCTGACTTTCAACTGATAGCAAAGAGCAGAGCATCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS GCA 72 bp | TGCTCTGCTCTTTGCTATCAGTTGAAAGTCAGCTTGTaGGATAACATTCTGCGTCCTAATGAAATTCATTTG | + |
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Preference number: 6 (lower is better) Translates to: CSALCYQLKVSL*DNILRPNEIHL Trigger: CAAATGAATTTCATTAGGACGCAGAATGTTATCGCACAAGCTGACTTTCAACTGATAGCAAAGAGCAGAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CCA 72 bp | GAGGTCAATCACTCTACAGTAACTGCATTACAAGCATaGTGTAATTTACGGCAACATTTGTCCATTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: EVNHSTVTALQA*CNLRQHLSIFL Trigger: CAGGAAAATGGACAAATGTTGCCGTAAATTACACCATGCTTGTAATGCAGTTACTGTAGAGTGATTGACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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| CDS CAA 90 bp | AAAGTCAGCTTGTGCGATAACATTCTGCGTCCTAATGAAATTCATTaGCAGTACAAAAATTTGAGTGAATCCAACAAGGGCTGTTACAGG | + |
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Preference number: 6 (lower is better) Translates to: KVSLCDNILRPNEIH*QYKNLSESNKGCYR Trigger: CCTGTAACAGCCCTTGTTGGATTCACTCAAATTTTTGTACTGCAAATGAATTTCATTAGGACGCAGAATGTTATCGCACAAGCTGACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637822.1 |
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