Pregenerated sensors for LINC02180 (Homo sapiens)
Ensembl gene IDs: ENSG00000261749Ensembl transcript IDs: ENST00000566439.3, ENST00000656714.1, ENST00000658449.1, ENST00000659261.1, ENST00000659332.1, ENST00000660788.1, ENST00000664235.1, ENST00000668292.1, ENST00000670037.1, ENST00000670505.1, ENST00000670615.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTGAGAGAGCCGTCACGGTTGATGGGAACACTTTGTGGACAAACCTaGAGGCCTGCATTTCTTCTGACTGAGTATTCATCAGCTCTGATG | + |
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Preference number: 5 (lower is better) Translates to: LREPSRLMGTLCGQT*RPAFLLTEYSSALM Trigger: CATCAGAGCTGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGACGGCTCTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659261.1 ENST00000670037.1 ENST00000670615.1 |
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| CDS GCA 90 bp | GAGAGCCGTCTTACACGGTTGATGGGAACACTTTGTGGACAAACCTaGAGGCCTGCATTTCTTCTGACTGAGTATTCATCAGCTCTGATG | + |
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Preference number: 5 (lower is better) Translates to: ESRLTRLMGTLCGQT*RPAFLLTEYSSALM Trigger: CATCAGAGCTGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGTAAGACGGCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660788.1 |
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| CDS GCA 90 bp | CTGAACTCCTCCACACGGTTGATGGGAACACTTTGTGGACAAACCTaGAGGCCTGCATTTCTTCTGACTGAGTATTCATCAGCTCTGATG | + |
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Preference number: 5 (lower is better) Translates to: LNSSTRLMGTLCGQT*RPAFLLTEYSSALM Trigger: CATCAGAGCTGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGTGGAGGAGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670505.1 |
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| CDS TCA 90 bp | GGGAACACTTTGTGGACAAACCTGCAGGCCTGCATTTCTTCTGACTaGGTATTCATCAGCTCTGATGCCTCTGAGATGCTGCTTCAAATG | + |
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Preference number: 5 (lower is better) Translates to: GNTLWTNLQACISSD*VFISSDASEMLLQM Trigger: CATTTGAAGCAGCATCTCAGAGGCATCAGAGCTGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659261.1 |
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| CDS GCA 90 bp | GAGCGCATTTTCACACGGTTGATGGGAACACTTTGTGGACAAACCTaGAGGCCTGCATTTCTTCTGACTGAGTATTCATCAGCTCTGATG | + |
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Preference number: 5 (lower is better) Translates to: ERIFTRLMGTLCGQT*RPAFLLTEYSSALM Trigger: CATCAGAGCTGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGTGAAAATGCGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658449.1 ENST00000664235.1 ENST00000668292.1 |
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| CDS TCA 90 bp | TGTTTGATGTGGAAAAATAGCATCCCTAAGTGCCTGGATTCAAAATaGGACTCTGAGGGCATGGGAGTGCCTAGGACTTCGGCAAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: CLMWKNSIPKCLDSK*DSEGMGVPRTSAKS Trigger: TGACTTTGCCGAAGTCCTAGGCACTCCCATGCCCTCAGAGTCTCATTTTGAATCCAGGCACTTAGGGATGCTATTTTTCCACATCAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS TCA 90 bp | CATTTTACTAATATCCCAAGGTGGATTCATATAGACAGTAACATTTaGGAGAGCCGTCCTTGCTCGTTTATCTCCCCCTTGGCCTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: HFTNIPRWIHIDSNI*ESRPCSFISPLASN Trigger: GTTGGAGGCCAAGGGGGAGATAAACGAGCAAGGACGGCTCTCTCAAATGTTACTGTCTATATGAATCCACCTTGGGATATTAGTAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000656714.1 ENST00000658449.1 |
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| CDS TCA 90 bp | TCTTCACTACTGTCACCAGAATTCTTTGGCTGGGAGGAAGCTGTTTaGTGTGGAAAAATAGCATCCCTAAGTGCCTGGATTCAAAATGAG | + |
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Preference number: 5 (lower is better) Translates to: SSLLSPEFFGWEEAV*CGKIASLSAWIQNE Trigger: CTCATTTTGAATCCAGGCACTTAGGGATGCTATTTTTCCACATCAAACAGCTTCCTCCCAGCCAAAGAATTCTGGTGACAGTAGTGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS TCA 90 bp | GGGAACACTTTGTGGACAAACCTGCAGGCCTGCATTTCTTCTGACTaGGTATTCATCAGCTCTGATGTTCATAAGGTTTTTGTGAAGATT | + |
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Preference number: 5 (lower is better) Translates to: GNTLWTNLQACISSD*VFISSDVHKVFVKI Trigger: AATCTTCACAAAAACCTTATGAACATCAGAGCTGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000658449.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670037.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS TCA 90 bp | CATTTTACTAATATCCCAAGGTGGATTCATATAGACAGTAACATTTaGGAGAGCCGTCGGTTGATGGGAACACTTTGTGGACAAACCTGC | + |
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Preference number: 5 (lower is better) Translates to: HFTNIPRWIHIDSNI*ESRRLMGTLCGQTC Trigger: GCAGGTTTGTCCACAAAGTGTTCCCATCAACCGACGGCTCTCTCAAATGTTACTGTCTATATGAATCCACCTTGGGATATTAGTAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659332.1 |
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| CDS CCA 90 bp | ACAGGAAGACAGCAGAGACTTCTCCAGTTAACATTCTTTTATGACTaGTACACCATTCACTTCACTGTACCCAATTTACAGGTCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: TGRQQRLLQLTFFYD*YTIHFTVPNLQVSW Trigger: CCAAGAGACCTGTAAATTGGGTACAGTGAAGTGAATGGTGTACCAGTCATAAAAGAATGTTAACTGGAGAAGTCTCTGCTGTCTTCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670037.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS TCA 90 bp | AGTTACAGGAAGACAGCAGAGACTTCTCCAGTTAACATTCTTTTATaGCTGGTACACCATTCACTTCACTGTACCCAATTTACAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: SYRKTAETSPVNILL*LVHHSLHCTQFTGL Trigger: GAGACCTGTAAATTGGGTACAGTGAAGTGAATGGTGTACCAGTCATAAAAGAATGTTAACTGGAGAAGTCTCTGCTGTCTTCCTGTAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670037.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS TCA 90 bp | CATTTTACTAATATCCCAAGGTGGATTCATATAGACAGTAACATTTaGGAGAGCCGTCTTACACGGTTGATGGGAACACTTTGTGGACAA | + |
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Preference number: 5 (lower is better) Translates to: HFTNIPRWIHIDSNI*ESRLTRLMGTLCGQ Trigger: TTGTCCACAAAGTGTTCCCATCAACCGTGTAAGACGGCTCTCTCAAATGTTACTGTCTATATGAATCCACCTTGGGATATTAGTAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660788.1 |
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| CDS CCA 90 bp | TACACCATTCACTTCACTGTACCCAATTTACAGGTCTCTTGGATGTaGCTAAACTATCTCTTCCTTCCCACCTGTTCTAGACAAAAATTT | + |
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Preference number: 5 (lower is better) Translates to: YTIHFTVPNLQVSWM*LNYLFLPTCSRQKF Trigger: AAATTTTTGTCTAGAACAGGTGGGAAGGAAGAGATAGTTTAGCCACATCCAAGAGACCTGTAAATTGGGTACAGTGAAGTGAATGGTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670037.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS TCA 90 bp | CATTTTACTAATATCCCAAGGTGGATTCATATAGACAGTAACATTTaGGAGAGCCGTCCTGAAATATTCATATCCTCATTTTATGGATGG | + |
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Preference number: 5 (lower is better) Translates to: HFTNIPRWIHIDSNI*ESRPEIFISSFYGW Trigger: CCATCCATAAAATGAGGATATGAATATTTCAGGACGGCTCTCTCAAATGTTACTGTCTATATGAATCCACCTTGGGATATTAGTAAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664235.1 ENST00000668292.1 |
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| CDS CCA 72 bp | ACCACCGATGTCCTATTCAGAGCTGGGCATTGTCCCTaGGTCTCAAGGTCCCCAGTCTGGCCTTTTACCCAC | + |
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Preference number: 6 (lower is better) Translates to: TTDVLFRAGHCP*VSRSPVWPFTH Trigger: GTGGGTAAAAGGCCAGACTGGGGACCTTGAGACCCAGGGACAATGCCCAGCTCTGAATAGGACATCGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664235.1 ENST00000668292.1 |
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| CDS CAA 72 bp | CTGAAATACCACCGATGTCCTATTCAGAGCTGGGCATaGTCCCTGGGTCTCAAGGTCCCCAGTCTGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LKYHRCPIQSWA*SLGLKVPSLAF Trigger: AAAGGCCAGACTGGGGACCTTGAGACCCAGGGACAATGCCCAGCTCTGAATAGGACATCGGTGGTATTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664235.1 ENST00000668292.1 |
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| CDS CAA 72 bp | CGCCGAGCGCATTTTCACACGGTTGATGGGAACACTTaGTGGACAAACCTGCAGGCCTGCATTTCTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: RRAHFHTVDGNT*WTNLQACISSD Trigger: GTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGTGAAAATGCGCTCGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658449.1 ENST00000664235.1 ENST00000668292.1 |
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| CDS CAA 72 bp | CCTCTGTGTGTCTCAAGTTCCAGCTCTCTAAGGTCATaGGCGACTCCAGTTGCCTCATCCTCCCCCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: PLCVSSSSSLRS*ATPVASSSPKE Trigger: TTCTTTGGGGGAGGATGAGGCAACTGGAGTCGCCAATGACCTTAGAGAGCTGGAACTTGAGACACACAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659261.1 |
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| CDS CAA 72 bp | ACATTTGAGAGAGCCGTCACGGTTGATGGGAACACTTaGTGGACAAACCTGCAGGCCTGCATTTCTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: TFERAVTVDGNT*WTNLQACISSD Trigger: GTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGACGGCTCTCTCAAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659261.1 ENST00000670037.1 ENST00000670615.1 |
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| CDS CAA 72 bp | TTGAGAGAGCCGTCTTACACGGTTGATGGGAACACTTaGTGGACAAACCTGCAGGCCTGCATTTCTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LREPSYTVDGNT*WTNLQACISSD Trigger: GTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGTAAGACGGCTCTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660788.1 |
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| CDS CAA 72 bp | ATAGCTGAACTCCTCCACACGGTTGATGGGAACACTTaGTGGACAAACCTGCAGGCCTGCATTTCTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: IAELLHTVDGNT*WTNLQACISSD Trigger: GTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGTGGAGGAGTTCAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670505.1 |
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| CDS TCA 72 bp | GAGTGCCTAGGACTTCGGCAAAGTCAAGGTAATAGCTaGACTCCTCCACCTGGGAGACAGAATATCAGCATT | + |
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Preference number: 6 (lower is better) Translates to: ECLGLRQSQGNS*TPPPGRQNISI Trigger: AATGCTGATATTCTGTCTCCCAGGTGGAGGAGTTCAGCTATTACCTTGACTTTGCCGAAGTCCTAGGCACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670615.1 |
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| CDS TCA 72 bp | TGGAAAAATAGCATCCCTAAGTGCCTGGATTCAAAATaGGACTCTGAGGGCATGGGAGTGCCTAGGACTTCG | + |
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Preference number: 6 (lower is better) Translates to: WKNSIPKCLDSK*DSEGMGVPRTS Trigger: CGAAGTCCTAGGCACTCCCATGCCCTCAGAGTCTCATTTTGAATCCAGGCACTTAGGGATGCTATTTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS GCA 72 bp | CCGTCACGGTTGATGGGAACACTTTGTGGACAAACCTaGAGGCCTGCATTTCTTCTGACTGAGTATTCATCA | + |
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Preference number: 6 (lower is better) Translates to: PSRLMGTLCGQT*RPAFLLTEYSS Trigger: TGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659261.1 ENST00000670037.1 ENST00000670615.1 |
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| CDS GCA 72 bp | AGCCGTCGGTTGATGGGAACACTTTGTGGACAAACCTaGAGGCCTGCATTTCTTCTGACTGAGTATTCATCA | + |
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Preference number: 6 (lower is better) Translates to: SRRLMGTLCGQT*RPAFLLTEYSS Trigger: TGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGACGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659332.1 |
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| CDS CCA 72 bp | CTAAGTGCCTGGATTCAAAATGAGACTCTGAGGGCATaGGAGTGCCTAGGACTTCGGCAAAGTCAAGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LSAWIQNETLRA*ECLGLRQSQGN Trigger: ATTACCTTGACTTTGCCGAAGTCCTAGGCACTCCCATGCCCTCAGAGTCTCATTTTGAATCCAGGCACTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS GCA 72 bp | TCCACACGGTTGATGGGAACACTTTGTGGACAAACCTaGAGGCCTGCATTTCTTCTGACTGAGTATTCATCA | + |
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Preference number: 6 (lower is better) Translates to: STRLMGTLCGQT*RPAFLLTEYSS Trigger: TGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670505.1 |
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| CDS TCA 72 bp | CTGTCACCAGAATTCTTTGGCTGGGAGGAAGCTGTTTaGTGTGGAAAAATAGCATCCCTAAGTGCCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: LSPEFFGWEEAV*CGKIASLSAWI Trigger: AATCCAGGCACTTAGGGATGCTATTTTTCCACATCAAACAGCTTCCTCCCAGCCAAAGAATTCTGGTGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS GCA 72 bp | TTCACACGGTTGATGGGAACACTTTGTGGACAAACCTaGAGGCCTGCATTTCTTCTGACTGAGTATTCATCA | + |
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Preference number: 6 (lower is better) Translates to: FTRLMGTLCGQT*RPAFLLTEYSS Trigger: TGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658449.1 ENST00000664235.1 ENST00000668292.1 |
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| CDS GCA 72 bp | CTTACACGGTTGATGGGAACACTTTGTGGACAAACCTaGAGGCCTGCATTTCTTCTGACTGAGTATTCATCA | + |
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Preference number: 6 (lower is better) Translates to: LTRLMGTLCGQT*RPAFLLTEYSS Trigger: TGATGAATACTCAGTCAGAAGAAATGCAGGCCTGCAGGTTTGTCCACAAAGTGTTCCCATCAACCGTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660788.1 |
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| CDS CAA 72 bp | ACTGTCACCAGAATTCTTTGGCTGGGAGGAAGCTGTTaGATGTGGAAAAATAGCATCCCTAAGTGCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: TVTRILWLGGSC*MWKNSIPKCLD Trigger: ATCCAGGCACTTAGGGATGCTATTTTTCCACATCAAACAGCTTCCTCCCAGCCAAAGAATTCTGGTGACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS CAA 72 bp | CACCATTCACTTCACTGTACCCAATTTACAGGTCTCTaGGATGTGGCTAAACTATCTCTTCCTTCCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: HHSLHCTQFTGL*DVAKLSLPSHL Trigger: CAGGTGGGAAGGAAGAGATAGTTTAGCCACATCCAAGAGACCTGTAAATTGGGTACAGTGAAGTGAATGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670037.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS TCA 72 bp | AATATCCCAAGGTGGATTCATATAGACAGTAACATTTaGGAGAGCCGTCCTTGCTCGTTTATCTCCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: NIPRWIHIDSNI*ESRPCSFISPL Trigger: CAAGGGGGAGATAAACGAGCAAGGACGGCTCTCTCAAATGTTACTGTCTATATGAATCCACCTTGGGATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656714.1 ENST00000658449.1 |
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| CDS CAA 72 bp | TATGATTTCCTGAAACCTTGCTCGTTTATCTCCCCCTaGGCCTCCAACATCAGAGTACTTGTAGAGCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: YDFLKPCSFISP*ASNIRVLVEPY Trigger: ATAAGGCTCTACAAGTACTCTGATGTTGGAGGCCAAGGGGGAGATAAACGAGCAAGGTTTCAGGAAATCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664235.1 |
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| CDS TCA 72 bp | AATATCCCAAGGTGGATTCATATAGACAGTAACATTTaGGAGAGCCGTCGGTTGATGGGAACACTTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: NIPRWIHIDSNI*ESRRLMGTLCG Trigger: TCCACAAAGTGTTCCCATCAACCGACGGCTCTCTCAAATGTTACTGTCTATATGAATCCACCTTGGGATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659332.1 |
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| CDS CCA 72 bp | ACCAGAATTCTTTGGCTGGGAGGAAGCTGTTTGATGTaGAAAAATAGCATCCCTAAGTGCCTGGATTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: TRILWLGGSCLM*KNSIPKCLDSK Trigger: TTTTGAATCCAGGCACTTAGGGATGCTATTTTTCCACATCAAACAGCTTCCTCCCAGCCAAAGAATTCTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670505.1 ENST00000670615.1 |
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| CDS TCA 72 bp | AATATCCCAAGGTGGATTCATATAGACAGTAACATTTaGGAGAGCCGTCTTACACGGTTGATGGGAACACTT | + |
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Preference number: 6 (lower is better) Translates to: NIPRWIHIDSNI*ESRLTRLMGTL Trigger: AAGTGTTCCCATCAACCGTGTAAGACGGCTCTCTCAAATGTTACTGTCTATATGAATCCACCTTGGGATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660788.1 |
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| CDS CAA 72 bp | TTTACCCACCAAGAGATATGCAAAAGAATTTTCGTTTaGACCTTCAGCCTGGTTGATAACAGCTGTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: FTHQEICKRIFV*TFSLVDNSCLP Trigger: GGGAAGACAGCTGTTATCAACCAGGCTGAAGGTCAAAACGAAAATTCTTTTGCATATCTCTTGGTGGGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664235.1 ENST00000668292.1 |
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| CDS CAA 90 bp | TTCTTCCAGGATTTATCCCCTACAGGTAAAAGCTTATTGATTCCATaGGTGATCCTAGAATTCACACATTCCCTCTGTGTGTCTCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: FFQDLSPTGKSLLIP*VILEFTHSLCVSQV Trigger: AACTTGAGACACACAGAGGGAATGTGTGAATTCTAGGATCACCAATGGAATCAATAAGCTTTTACCTGTAGGGGATAAATCCTGGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659261.1 |
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| CDS CAA 90 bp | ACTCTAGAATTCTTCCAGGATTTATCCCCTACAGGTAAAAGCTTATaGATTCCATTGGTGATCCTAGAATTCACACATTCCCTCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TLEFFQDLSPTGKSL*IPLVILEFTHSLCV Trigger: CACACAGAGGGAATGTGTGAATTCTAGGATCACCAATGGAATCAATAAGCTTTTACCTGTAGGGGATAAATCCTGGAAGAATTCTAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659261.1 |
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| CDS CAA 90 bp | TCCTTTGGTTGTCTTTACTTCATTCTTCTCCTCTTTGCTTTTGCTTaGTCATTCTGGGAGACAGAATATCAGCATTTCAGGCGCTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: SFGCLYFILLLFAFA*SFWETEYQHFRRFL Trigger: TAGAAAGCGCCTGAAATGCTGATATTCTGTCTCCCAGAATGACAAAGCAAAAGCAAAGAGGAGAAGAATGAAGTAAAGACAACCAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670037.1 |
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| CDS CAA 90 bp | TCTTTTCCTTTGGTTGTCTTTACTTCATTCTTCTCCTCTTTGCTTTaGCTTTGTCATTCTGGGAGACAGAATATCAGCATTTCAGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: SFPLVVFTSFFSSLL*LCHSGRQNISISGA Trigger: AGCGCCTGAAATGCTGATATTCTGTCTCCCAGAATGACAAAGCAAAAGCAAAGAGGAGAAGAATGAAGTAAAGACAACCAAAGGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670037.1 |
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| CDS CCA 72 bp | CAGCAGAGACTTCTCCAGTTAACATTCTTTTATGACTaGTACACCATTCACTTCACTGTACCCAATTTACAG | + |
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Preference number: 6 (lower is better) Translates to: QQRLLQLTFFYD*YTIHFTVPNLQ Trigger: CTGTAAATTGGGTACAGTGAAGTGAATGGTGTACCAGTCATAAAAGAATGTTAACTGGAGAAGTCTCTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000566439.3 ENST00000656714.1 ENST00000658449.1 ENST00000659261.1 ENST00000659332.1 ENST00000660788.1 ENST00000664235.1 ENST00000668292.1 ENST00000670037.1 ENST00000670505.1 ENST00000670615.1 |
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