Pregenerated sensors for LINC02179 (Homo sapiens)
Ensembl gene IDs: ENSG00000261623Ensembl transcript IDs: ENST00000561523.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGTGCTTGGGTGCACGCAGGCATGTCCTGTGTCTGTGCACACATGTaGAGGCCTGGGTGTTGGCCCCGGGGGTATAAGGTTGCCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: GAWVHAGMSCVCAHM*RPGCWPRGYKVARC Trigger: GCACCTGGCAACCTTATACCCCCGGGGCCAACACCCAGGCCTGCACATGTGTGCACAGACACAGGACATGCCTGCGTGCACCCAAGCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 90 bp | CTGGGGCCAGCGGGCTCCCAGGAGCCTGACTACAAGCTCAGTCCTTaGCTCGTGTCCTTCCCCCATCAGCTCAACCTAAGGCCCAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LGPAGSQEPDYKLSP*LVSFPHQLNLRPKF Trigger: GAACTTGGGCCTTAGGTTGAGCTGATGGGGGAAGGACACGAGGCAAGGACTGAGCTTGTAGTCAGGCTCCTGGGAGCCCGCTGGCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | CCAGCAACTCCCTCCTCGAGCAGCAGCCCGGTCCATCAGGCACCCTaGTGTCAGCAGGGTGCATCATCAGCTCCTGGAAGGTTAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: PATPSSSSSPVHQAP*CQQGASSAPGRLMP Trigger: TGGCATTAACCTTCCAGGAGCTGATGATGCACCCTGCTGACACCAGGGTGCCTGATGGACCGGGCTGCTGCTCGAGGAGGGAGTTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 90 bp | AGCAGAAGGTGCCCAAAAGCACCTGAGTATGCCTTTGGGGGCAGGTaGTTGGGTGCACGCAGGCATGTCCTGTGTCTGTGCACACATGTG | + |
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Preference number: 5 (lower is better) Translates to: SRRCPKAPEYAFGGR*LGARRHVLCLCTHV Trigger: CACATGTGTGCACAGACACAGGACATGCCTGCGTGCACCCAAGCACCTGCCCCCAAAGGCATACTCAGGTGCTTTTGGGCACCTTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | CTCTTAGGGAGCATGAAGGATGCAGATGGAGCTGGAGCTGTGACCTaGGGCCTGGATGTCCCCATCCTGCACATGAAGGCAGTACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LLGSMKDADGAGAVT*GLDVPILHMKAVLW Trigger: CCAGAGTACTGCCTTCATGTGCAGGATGGGGACATCCAGGCCCCAGGTCACAGCTCCAGCTCCATCTGCATCCTTCATGCTCCCTAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 90 bp | AGTCAGTCATACGCCTGCCCTAAACAGCCATGGGCCATGGGGATGTaGTGTGCTGACTGGCACAGTCATGTGTTCCTCCTGGTGCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SQSYACPKQPWAMGM*CADWHSHVFLLVQS Trigger: GGACTGCACCAGGAGGAACACATGACTGTGCCAGTCAGCACATCACATCCCCATGGCCCATGGCTGTTTAGGGCAGGCGTATGACTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 90 bp | GACGGGTGGTCCTATGTAGGGGGAGCTGGTTTCTTAATCCTAGGATaGCCCTTCTCCAAGGAGTTGTGTCAGAGGCTGACCCAAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: DGWSYVGGAGFLILG*PFSKELCQRLTQSW Trigger: CCAGCTTTGGGTCAGCCTCTGACACAACTCCTTGGAGAAGGGGCATCCTAGGATTAAGAAACCAGCTCCCCCTACATAGGACCACCCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 90 bp | AGGCAAAGTCACACAGCTAGGAAAGGATATGTAGGGACCCACGTCTaGCTGACCCCAAAGCCAGGAGTCAGGTCCAGACTCTCAAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RQSHTARKGYVGTHV*LTPKPGVRSRLSRE Trigger: CTCCCTTGAGAGTCTGGACCTGACTCCTGGCTTTGGGGTCAGGCAGACGTGGGTCCCTACATATCCTTTCCTAGCTGTGTGACTTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | TTGCTATTGGCACCCCAGACCCGGCGTCTTTGTTATGCTGACGGGTaGTCCTATGTAGGGGGAGCTGGTTTCTTAATCCTAGGATGCCCC | + |
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Preference number: 5 (lower is better) Translates to: LLLAPQTRRLCYADG*SYVGGAGFLILGCP Trigger: GGGGCATCCTAGGATTAAGAAACCAGCTCCCCCTACATAGGACCACCCGTCAGCATAACAAAGACGCCGGGTCTGGGGTGCCAATAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 90 bp | GGCTGGCCTGGCATTCACAGCCAGGCCATGGTGTTCTGTTGGACATaGACAGTTCTACAGCCCAGAAACATCAGACAAGACCGCTCGGTA | + |
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Preference number: 5 (lower is better) Translates to: GWPGIHSQAMVFCWT*TVLQPRNIRQDRSV Trigger: TACCGAGCGGTCTTGTCTGATGTTTCTGGGCTGTAGAACTGTTCATGTCCAACAGAACACCATGGCCTGGCTGTGAATGCCAGGCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | GTTATCCTCATAACAACTGAGAAAGGGGAAAGCCCTCTGACAGCCTaGGCTGGCCTGGCATTCACAGCCAGGCCATGGTGTTCTGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: VILITTEKGESPLTA*AGLAFTARPWCSVG Trigger: TCCAACAGAACACCATGGCCTGGCTGTGAATGCCAGGCCAGCCCAGGCTGTCAGAGGGCTTTCCCCTTTCTCAGTTGTTATGAGGATAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | ATTGGACAAGTCAGTCATACGCCTGCCCTAAACAGCCATGGGCCATaGGGATGTGATGTGCTGACTGGCACAGTCATGTGTTCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: IGQVSHTPALNSHGP*GCDVLTGTVMCSSW Trigger: CCAGGAGGAACACATGACTGTGCCAGTCAGCACATCACATCCCCATGGCCCATGGCTGTTTAGGGCAGGCGTATGACTGACTTGTCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | GCAAAAAGCCCTCTCTGTTTGCCCATAGTCCCCACACATCCCTCTTaGTCAACACCTTTGCCCATCCACATTTCCATCACCTGCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: AKSPLCLPIVPTHPS*STPLPIHISITCLA Trigger: GGCCAGGCAGGTGATGGAAATGTGGATGGGCAAAGGTGTTGACCAAGAGGGATGTGTGGGGACTATGGGCAAACAGAGAGGGCTTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 90 bp | TTGCCTATGGTTTGCCAAGTGTGGGCACGTTATCCTCATAACAACTaGGAAAGGGGAAAGCCCTCTGACAGCCTGGGCTGGCCTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: LPMVCQVWARYPHNN*ERGKPSDSLGWPGI Trigger: AATGCCAGGCCAGCCCAGGCTGTCAGAGGGCTTTCCCCTTTCTCAGTTGTTATGAGGATAACGTGCCCACACTTGGCAAACCATAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 90 bp | CATTCCATTGCTATTGGCACCCCAGACCCGGCGTCTTTGTTATGCTaGCGGGTGGTCCTATGTAGGGGGAGCTGGTTTCTTAATCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: HSIAIGTPDPASLLC*RVVLCRGSWFLNPR Trigger: CCTAGGATTAAGAAACCAGCTCCCCCTACATAGGACCACCCGTCAGCATAACAAAGACGCCGGGTCTGGGGTGCCAATAGCAATGGAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | TGCTGGAAGCATCCCTGTGCAACTTCAACCTTCTCTGAGCCTCTGTaGTGCGGGCAGCCTCTGCCACATAATGTATCAACCTCCAGATCA | + |
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Preference number: 5 (lower is better) Translates to: CWKHPCATSTFSEPL*CGQPLPHNVSTSRS Trigger: TGATCTGGAGGTTGATACATTATGTGGCAGAGGCTGCCCGCACCACAGAGGCTCAGAGAAGGTTGAAGTTGCACAGGGATGCTTCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | AGAGGAGCCTGGCATAGTGAGCAAATCTCTGAAATCAGCTACATGTaGCCTCACCACTTAACGGCGATGGGACCTTGGACCTGTGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RGAWHSEQISEISYM*PHHLTAMGPWTCEP Trigger: TGGCTCACAGGTCCAAGGTCCCATCGCCGTTAAGTGGTGAGGCCACATGTAGCTGATTTCAGAGATTTGCTCACTATGCCAGGCTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | AGATGCTGCTGTTTGTCCTTAGTGAAGCTCCCATTCCATTGCTATTaGCACCCCAGACCCGGCGTCTTTGTTATGCTGACGGGTGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: RCCCLSLVKLPFHCY*HPRPGVFVMLTGGP Trigger: AGGACCACCCGTCAGCATAACAAAGACGCCGGGTCTGGGGTGCCAATAGCAATGGAATGGGAGCTTCACTAAGGACAAACAGCAGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 90 bp | CTACATGTGGCCTCACCACTTAACGGCGATGGGACCTTGGACCTGTaGGCCAATTCTTTATCCATAAAATGGGGATGCTCCTTCCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: LHVASPLNGDGTLDL*ANSLSIKWGCSFLP Trigger: GGGGAGGAAGGAGCATCCCCATTTTATGGATAAAGAATTGGCTCACAGGTCCAAGGTCCCATCGCCGTTAAGTGGTGAGGCCACATGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | GACTACTGCCTCTTGGCAGAGAGGCACCATGACAACCCACCAAAGTaGGCTAATCAGGCCTCTGCTCTGATTTATTTGGAGTCATCCTTC | + |
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Preference number: 5 (lower is better) Translates to: DYCLLAERHHDNPPK*ANQASALIYLESSF Trigger: GAAGGATGACTCCAAATAAATCAGAGCAGAGGCCTGATTAGCCCACTTTGGTGGGTTGTCATGGTGCCTCTCTGCCAAGAGGCAGTAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 90 bp | GCGGGCAGCCTCTGCCACATAATGTATCAACCTCCAGATCATCACTaGTCCAGCATAGCTGAAATATTGCCTATGGTTTGCCAAGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: AGSLCHIMYQPPDHH*SSIAEILPMVCQVW Trigger: CCACACTTGGCAAACCATAGGCAATATTTCAGCTATGCTGGAGCAGTGATGATCTGGAGGTTGATACATTATGTGGCAGAGGCTGCCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 90 bp | CAAATGTGTACAGAGCACCTCATCTTTGTCAGACCCTGTTCCAGGTaGTGGGATGGATCAATGAACCAAGCAATCGAAAGCCCTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: QMCTEHLIFVRPCSR*WDGSMNQAIESPVF Trigger: GAAGACAGGGCTTTCGATTGCTTGGTTCATTGATCCATCCCAGCACCTGGAACAGGGTCTGACAAAGATGAGGTGCTCTGTACACATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 90 bp | GGCACCATGACAACCCACCAAAGTGGGCTAATCAGGCCTCTGCTCTaGTTTATTTGGAGTCATCCTTCCTCCTCTTGCAACTTCTATTCA | + |
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Preference number: 5 (lower is better) Translates to: GTMTTHQSGLIRPLL*FIWSHPSSSCNFYS Trigger: TGAATAGAAGTTGCAAGAGGAGGAAGGATGACTCCAAATAAATCAGAGCAGAGGCCTGATTAGCCCACTTTGGTGGGTTGTCATGGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 90 bp | CCCTCAGATGGCCTCTTGTTGGCTGTAGAAGTGGTGCTTAGTTTTTaGAGTTTGAAGGTCTTTAGGTGCAAAAAGCCCTCTCTGTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: PSDGLLLAVEVVLSF*SLKVFRCKKPSLFA Trigger: GGCAAACAGAGAGGGCTTTTTGCACCTAAAGACCTTCAAACTGCAAAAACTAAGCACCACTTCTACAGCCAACAAGAGGCCATCTGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 90 bp | GTTGTAGCTTTGCTCAGTTCCTCCTGCCGTCTAGAAGAGAATCATTaGCATACCCAATCACAGAATTACCCTTGCTTCCTGACAGCATCC | + |
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Preference number: 5 (lower is better) Translates to: VVALLSSSCRLEENH*HTQSQNYPCFLTAS Trigger: GGATGCTGTCAGGAAGCAAGGGTAATTCTGTGATTGGGTATGTCAATGATTCTCTTCTAGACGGCAGGAGGAACTGAGCAAAGCTACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 90 bp | CCACATAATGTATCAACCTCCAGATCATCACTGCTCCAGCATAGCTaGAATATTGCCTATGGTTTGCCAAGTGTGGGCACGTTATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: PHNVSTSRSSLLQHS*NIAYGLPSVGTLSS Trigger: TGAGGATAACGTGCCCACACTTGGCAAACCATAGGCAATATTTCAGCTATGCTGGAGCAGTGATGATCTGGAGGTTGATACATTATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 90 bp | CTGCCCAAATGTTCCCCTTCCTGGCTCAAATGTTTCTTAACTAATTaGAGTTGTAGCTTTGCTCAGTTCCTCCTGCCGTCTAGAAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: LPKCSPSWLKCFLTN*SCSFAQFLLPSRRE Trigger: TTCTCTTCTAGACGGCAGGAGGAACTGAGCAAAGCTACAACTGCAATTAGTTAAGAAACATTTGAGCCAGGAAGGGGAACATTTGGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 90 bp | GTGAACATCGTCCAAATGACAAAACTGCCCAAATGTTCCCCTTCCTaGCTCAAATGTTTCTTAACTAATTGCAGTTGTAGCTTTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: VNIVQMTKLPKCSPS*LKCFLTNCSCSFAQ Trigger: CTGAGCAAAGCTACAACTGCAATTAGTTAAGAAACATTTGAGCCAGGAAGGGGAACATTTGGGCAGTTTTGTCATTTGGACGATGTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | CCCTCCTCGAGCAGCAGCCCGGTCCATCAGGCACCCTaGTGTCAGCAGGGTGCATCATCAGCTCCTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PSSSSSPVHQAP*CQQGASSAPGR Trigger: CCTTCCAGGAGCTGATGATGCACCCTGCTGACACCAGGGTGCCTGATGGACCGGGCTGCTGCTCGAGGAGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 72 bp | GCGGGCTCCCAGGAGCCTGACTACAAGCTCAGTCCTTaGCTCGTGTCCTTCCCCCATCAGCTCAACCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: AGSQEPDYKLSP*LVSFPHQLNLR Trigger: CCTTAGGTTGAGCTGATGGGGGAAGGACACGAGGCAAGGACTGAGCTTGTAGTCAGGCTCCTGGGAGCCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 72 bp | TGCCCAAAAGCACCTGAGTATGCCTTTGGGGGCAGGTaGTTGGGTGCACGCAGGCATGTCCTGTGTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: CPKAPEYAFGGR*LGARRHVLCLC Trigger: GCACAGACACAGGACATGCCTGCGTGCACCCAAGCACCTGCCCCCAAAGGCATACTCAGGTGCTTTTGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 72 bp | AGAGCAGAAGGTGCCCAAAAGCACCTGAGTATGCCTTaGGGGGCAGGTGCTTGGGTGCACGCAGGCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: RAEGAQKHLSMP*GAGAWVHAGMS Trigger: GGACATGCCTGCGTGCACCCAAGCACCTGCCCCCAAAGGCATACTCAGGTGCTTTTGGGCACCTTCTGCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | GACAGGATTCAGGAACCATGCCTGGGAGGCCCTGAGTaGGATAGGCCTTCAGATGGACATGGCCCTCAGATG | + |
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Preference number: 6 (lower is better) Translates to: DRIQEPCLGGPE*DRPSDGHGPQM Trigger: CATCTGAGGGCCATGTCCATCTGAAGGCCTATCCCACTCAGGGCCTCCCAGGCATGGTTCCTGAATCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | CAAAAGCACCTGAGTATGCCTTTGGGGGCAGGTGCTTaGGTGCACGCAGGCATGTCCTGTGTCTGTGCACAC | + |
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Preference number: 6 (lower is better) Translates to: QKHLSMPLGAGA*VHAGMSCVCAH Trigger: GTGTGCACAGACACAGGACATGCCTGCGTGCACCCAAGCACCTGCCCCCAAAGGCATACTCAGGTGCTTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 72 bp | CCAAAAGCACCTGAGTATGCCTTTGGGGGCAGGTGCTaGGGTGCACGCAGGCATGTCCTGTGTCTGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: PKAPEYAFGGRC*GARRHVLCLCT Trigger: TGTGCACAGACACAGGACATGCCTGCGTGCACCCAAGCACCTGCCCCCAAAGGCATACTCAGGTGCTTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 72 bp | TACGCCTGCCCTAAACAGCCATGGGCCATGGGGATGTaGTGTGCTGACTGGCACAGTCATGTGTTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: YACPKQPWAMGM*CADWHSHVFLL Trigger: CAGGAGGAACACATGACTGTGCCAGTCAGCACATCACATCCCCATGGCCCATGGCTGTTTAGGGCAGGCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 72 bp | GCTATTGGCACCCCAGACCCGGCGTCTTTGTTATGCTaGCGGGTGGTCCTATGTAGGGGGAGCTGGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: AIGTPDPASLLC*RVVLCRGSWFL Trigger: AAGAAACCAGCTCCCCCTACATAGGACCACCCGTCAGCATAACAAAGACGCCGGGTCTGGGGTGCCAATAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 72 bp | CACACAGCTAGGAAAGGATATGTAGGGACCCACGTCTaGCTGACCCCAAAGCCAGGAGTCAGGTCCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: HTARKGYVGTHV*LTPKPGVRSRL Trigger: GAGTCTGGACCTGACTCCTGGCTTTGGGGTCAGGCAGACGTGGGTCCCTACATATCCTTTCCTAGCTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 90 bp | CAGCCTGGGCTGGCCTGGCATTCACAGCCAGGCCATGGTGTTCTGTaGGACATGAACAGTTCTACAGCCCAGAAACATCAGACAAGACCG | + |
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Preference number: 6 (lower is better) Translates to: QPGLAWHSQPGHGVL*DMNSSTAQKHQTRP Trigger: CGGTCTTGTCTGATGTTTCTGGGCTGTAGAACTGTTCATGTCCAACAGAACACCATGGCCTGGCTGTGAATGCCAGGCCAGCCCAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 72 bp | GATGAAGGCCTGGAGAGAGGAGGGGCAGATCTAGCATaGAGTGTGAGGGAGTATAGTCAGGGAGGACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: DEGLERGGADLA*SVREYSQGGLP Trigger: AGGAAGTCCTCCCTGACTATACTCCCTCACACTGCATGCTAGATCTGCCCCTCCTCTCTCCAGGCCTTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | GTCAGTCATACGCCTGCCCTAAACAGCCATGGGCCATaGGGATGTGATGTGCTGACTGGCACAGTCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: VSHTPALNSHGP*GCDVLTGTVMC Trigger: ACACATGACTGTGCCAGTCAGCACATCACATCCCCATGGCCCATGGCTGTTTAGGGCAGGCGTATGACTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | GCACCCCAGACCCGGCGTCTTTGTTATGCTGACGGGTaGTCCTATGTAGGGGGAGCTGGTTTCTTAATCCTA | + |
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Preference number: 6 (lower is better) Translates to: APQTRRLCYADG*SYVGGAGFLIL Trigger: TAGGATTAAGAAACCAGCTCCCCCTACATAGGACCACCCGTCAGCATAACAAAGACGCCGGGTCTGGGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 90 bp | CAGATGCTGCTGTTTGTCCTTAGTGAAGCTCCCATTCCATTGCTATaGGCACCCCAGACCCGGCGTCTTTGTTATGCTGACGGGTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QMLLFVLSEAPIPLL*APQTRRLCYADGWS Trigger: GGACCACCCGTCAGCATAACAAAGACGCCGGGTCTGGGGTGCCAATAGCAATGGAATGGGAGCTTCACTAAGGACAAACAGCAGCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | CATCCCTGTGCAACTTCAACCTTCTCTGAGCCTCTGTaGTGCGGGCAGCCTCTGCCACATAATGTATCAACC | + |
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Preference number: 6 (lower is better) Translates to: HPCATSTFSEPL*CGQPLPHNVST Trigger: GGTTGATACATTATGTGGCAGAGGCTGCCCGCACCACAGAGGCTCAGAGAAGGTTGAAGTTGCACAGGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 90 bp | TGCAAAAAGCCCTCTCTGTTTGCCCATAGTCCCCACACATCCCTCTaGGTCAACACCTTTGCCCATCCACATTTCCATCACCTGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CKKPSLFAHSPHTSL*VNTFAHPHFHHLPG Trigger: GCCAGGCAGGTGATGGAAATGTGGATGGGCAAAGGTGTTGACCAAGAGGGATGTGTGGGGACTATGGGCAAACAGAGAGGGCTTTTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 72 bp | TTGTCAGACCCTGTTCCAGGTGCTGGGATGGATCAATaGACCAAGCAATCGAAAGCCCTGTCTTCCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LSDPVPGAGMDQ*TKQSKALSSWH Trigger: GTGCCAGGAAGACAGGGCTTTCGATTGCTTGGTTCATTGATCCATCCCAGCACCTGGAACAGGGTCTGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | AGCCCTGTCTTCCTGGCACTTCCATTCATGTGGTCCTaGATAGTGAGAGGAAGTTACAAAGAGCATGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPVFLALPFMWS*IVRGSYKEHGA Trigger: GGCCCCATGCTCTTTGTAACTTCCTCTCACTATCCAGGACCACATGAATGGAAGTGCCAGGAAGACAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | CCTCTCTGTTTGCCCATAGTCCCCACACATCCCTCTTaGTCAACACCTTTGCCCATCCACATTTCCATCACC | + |
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Preference number: 6 (lower is better) Translates to: PLCLPIVPTHPS*STPLPIHISIT Trigger: GGTGATGGAAATGTGGATGGGCAAAGGTGTTGACCAAGAGGGATGTGTGGGGACTATGGGCAAACAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 72 bp | CTGGCCTGGCATTCACAGCCAGGCCATGGTGTTCTGTaGGACATGAACAGTTCTACAGCCCAGAAACATCAG | + |
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Preference number: 6 (lower is better) Translates to: LAWHSQPGHGVL*DMNSSTAQKHQ Trigger: CTGATGTTTCTGGGCTGTAGAACTGTTCATGTCCAACAGAACACCATGGCCTGGCTGTGAATGCCAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 72 bp | CCCTCTCTGTTTGCCCATAGTCCCCACACATCCCTCTaGGTCAACACCTTTGCCCATCCACATTTCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: PSLFAHSPHTSL*VNTFAHPHFHH Trigger: GTGATGGAAATGTGGATGGGCAAAGGTGTTGACCAAGAGGGATGTGTGGGGACTATGGGCAAACAGAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 90 bp | GTAAAGCAGATGCTGCTGTTTGTCCTTAGTGAAGCTCCCATTCCATaGCTATTGGCACCCCAGACCCGGCGTCTTTGTTATGCTGACGGG | + |
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Preference number: 6 (lower is better) Translates to: VKQMLLFVLSEAPIP*LLAPQTRRLCYADG Trigger: CCCGTCAGCATAACAAAGACGCCGGGTCTGGGGTGCCAATAGCAATGGAATGGGAGCTTCACTAAGGACAAACAGCAGCATCTGCTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 72 bp | GCCTCACCACTTAACGGCGATGGGACCTTGGACCTGTaGGCCAATTCTTTATCCATAAAATGGGGATGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASPLNGDGTLDL*ANSLSIKWGCS Trigger: GGAGCATCCCCATTTTATGGATAAAGAATTGGCTCACAGGTCCAAGGTCCCATCGCCGTTAAGTGGTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | TGGCATAGTGAGCAAATCTCTGAAATCAGCTACATGTaGCCTCACCACTTAACGGCGATGGGACCTTGGACC | + |
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Preference number: 6 (lower is better) Translates to: WHSEQISEISYM*PHHLTAMGPWT Trigger: GGTCCAAGGTCCCATCGCCGTTAAGTGGTGAGGCCACATGTAGCTGATTTCAGAGATTTGCTCACTATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | TGTTTGTCCTTAGTGAAGCTCCCATTCCATTGCTATTaGCACCCCAGACCCGGCGTCTTTGTTATGCTGACG | + |
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Preference number: 6 (lower is better) Translates to: CLSLVKLPFHCY*HPRPGVFVMLT Trigger: CGTCAGCATAACAAAGACGCCGGGTCTGGGGTGCCAATAGCAATGGAATGGGAGCTTCACTAAGGACAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | GAGCACCTCATCTTTGTCAGACCCTGTTCCAGGTGCTaGGATGGATCAATGAACCAAGCAATCGAAAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: EHLIFVRPCSRC*DGSMNQAIESP Trigger: AGGGCTTTCGATTGCTTGGTTCATTGATCCATCCCAGCACCTGGAACAGGGTCTGACAAAGATGAGGTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 72 bp | CTGTTTGTCCTTAGTGAAGCTCCCATTCCATTGCTATaGGCACCCCAGACCCGGCGTCTTTGTTATGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LFVLSEAPIPLL*APQTRRLCYAD Trigger: GTCAGCATAACAAAGACGCCGGGTCTGGGGTGCCAATAGCAATGGAATGGGAGCTTCACTAAGGACAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 72 bp | GGCATTCACAGCCAGGCCATGGTGTTCTGTTGGACATaGACAGTTCTACAGCCCAGAAACATCAGACAAGAC | + |
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Preference number: 6 (lower is better) Translates to: GIHSQAMVFCWT*TVLQPRNIRQD Trigger: GTCTTGTCTGATGTTTCTGGGCTGTAGAACTGTTCATGTCCAACAGAACACCATGGCCTGGCTGTGAATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | CCTCATCTTTGTCAGACCCTGTTCCAGGTGCTGGGATaGATCAATGAACCAAGCAATCGAAAGCCCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: PHLCQTLFQVLG*INEPSNRKPCL Trigger: AAGACAGGGCTTTCGATTGCTTGGTTCATTGATCCATCCCAGCACCTGGAACAGGGTCTGACAAAGATGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 72 bp | ATGCTGCTGTTTGTCCTTAGTGAAGCTCCCATTCCATaGCTATTGGCACCCCAGACCCGGCGTCTTTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: MLLFVLSEAPIP*LLAPQTRRLCY Trigger: ATAACAAAGACGCCGGGTCTGGGGTGCCAATAGCAATGGAATGGGAGCTTCACTAAGGACAAACAGCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 72 bp | GTATCAACCTCCAGATCATCACTGCTCCAGCATAGCTaGAATATTGCCTATGGTTTGCCAAGTGTGGGCACG | + |
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Preference number: 6 (lower is better) Translates to: VSTSRSSLLQHS*NIAYGLPSVGT Trigger: CGTGCCCACACTTGGCAAACCATAGGCAATATTTCAGCTATGCTGGAGCAGTGATGATCTGGAGGTTGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 72 bp | ACAACCCACCAAAGTGGGCTAATCAGGCCTCTGCTCTaGTTTATTTGGAGTCATCCTTCCTCCTCTTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: TTHQSGLIRPLL*FIWSHPSSSCN Trigger: GTTGCAAGAGGAGGAAGGATGACTCCAAATAAATCAGAGCAGAGGCCTGATTAGCCCACTTTGGTGGGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 72 bp | CCTCCAGATCATCACTGCTCCAGCATAGCTGAAATATaGCCTATGGTTTGCCAAGTGTGGGCACGTTATCCT | + |
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Preference number: 6 (lower is better) Translates to: PPDHHCSSIAEI*PMVCQVWARYP Trigger: AGGATAACGTGCCCACACTTGGCAAACCATAGGCAATATTTCAGCTATGCTGGAGCAGTGATGATCTGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | CCAAAGCCAGGAGTCAGGTCCAGACTCTCAAGGGAGTaGTTTCCTATTATTCAAGAGACTTCACCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PKPGVRSRLSRE*FPIIQETSPSF Trigger: GAAAGAAGGTGAAGTCTCTTGAATAATAGGAAACCACTCCCTTGAGAGTCTGGACCTGACTCCTGGCTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | ATCGAAAGCCCTGTCTTCCTGGCACTTCCATTCATGTaGTCCTGGATAGTGAGAGGAAGTTACAAAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: IESPVFLALPFM*SWIVRGSYKEH Trigger: ATGCTCTTTGTAACTTCCTCTCACTATCCAGGACCACATGAATGGAAGTGCCAGGAAGACAGGGCTTTCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 90 bp | CCGTCTAGAAGAGAATCATTGACATACCCAATCACAGAATTACCCTaGCTTCCTGACAGCATCCAGCCTAGAGAAACAGCCTGCAAAATC | + |
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Preference number: 6 (lower is better) Translates to: PSRRESLTYPITELP*LPDSIQPRETACKI Trigger: GATTTTGCAGGCTGTTTCTCTAGGCTGGATGCTGTCAGGAAGCAAGGGTAATTCTGTGATTGGGTATGTCAATGATTCTCTTCTAGACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 90 bp | GATGGCCTCTTGTTGGCTGTAGAAGTGGTGCTTAGTTTTTGCAGTTaGAAGGTCTTTAGGTGCAAAAAGCCCTCTCTGTTTGCCCATAGT | + |
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Preference number: 6 (lower is better) Translates to: DGLLLAVEVVLSFCS*KVFRCKKPSLFAHS Trigger: ACTATGGGCAAACAGAGAGGGCTTTTTGCACCTAAAGACCTTCAAACTGCAAAAACTAAGCACCACTTCTACAGCCAACAAGAGGCCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 72 bp | TTGCTCAGTTCCTCCTGCCGTCTAGAAGAGAATCATTaGCATACCCAATCACAGAATTACCCTTGCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLSSSCRLEENH*HTQSQNYPCFL Trigger: CAGGAAGCAAGGGTAATTCTGTGATTGGGTATGTCAATGATTCTCTTCTAGACGGCAGGAGGAACTGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 72 bp | AGAGAATCATTGACATACCCAATCACAGAATTACCCTaGCTTCCTGACAGCATCCAGCCTAGAGAAACAGCC | + |
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Preference number: 6 (lower is better) Translates to: RESLTYPITELP*LPDSIQPRETA Trigger: GGCTGTTTCTCTAGGCTGGATGCTGTCAGGAAGCAAGGGTAATTCTGTGATTGGGTATGTCAATGATTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 90 bp | ATGTATCAACCTCCAGATCATCACTGCTCCAGCATAGCTGAAATATaGCCTATGGTTTGCCAAGTGTGGGCACGTTATCCTCATAACAAC | + |
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Preference number: 6 (lower is better) Translates to: MYQPPDHHCSSIAEI*PMVCQVWARYPHNN Trigger: GTTGTTATGAGGATAACGTGCCCACACTTGGCAAACCATAGGCAATATTTCAGCTATGCTGGAGCAGTGATGATCTGGAGGTTGATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 90 bp | GACAACCCACCAAAGTGGGCTAATCAGGCCTCTGCTCTGATTTATTaGGAGTCATCCTTCCTCCTCTTGCAACTTCTATTCATCCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: DNPPKWANQASALIY*ESSFLLLQLLFILK Trigger: TTTAAGGATGAATAGAAGTTGCAAGAGGAGGAAGGATGACTCCAAATAAATCAGAGCAGAGGCCTGATTAGCCCACTTTGGTGGGTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS TCA 72 bp | ACACTATTATTATCCCTATATCACACGTGGGGAAACTaGGGACAGAGAGGTTTGAGCTACCTGCTCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: TLLLSLYHTWGN*GQRGLSYLLKS Trigger: TGACTTGAGCAGGTAGCTCAAACCTCTCTGTCCTCAGTTTCCCCACGTGTGATATAGGGATAATAATAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS GCA 72 bp | CTCTGCCACATAATGTATCAACCTCCAGATCATCACTaGTCCAGCATAGCTGAAATATTGCCTATGGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LCHIMYQPPDHH*SSIAEILPMVC Trigger: GCAAACCATAGGCAATATTTCAGCTATGCTGGAGCAGTGATGATCTGGAGGTTGATACATTATGTGGCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CCA 72 bp | GTGGAGAGGGTGATTTGTTTTGAGATCTTATCTTATTaGACAAGTCAGTCATACGCCTGCCCTAAACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VERVICFEILSY*TSQSYACPKQP Trigger: TGGCTGTTTAGGGCAGGCGTATGACTGACTTGTCCAATAAGATAAGATCTCAAAACAAATCACCCTCTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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| CDS CAA 72 bp | TTTGCTCAGTTCCTCCTGCCGTCTAGAAGAGAATCATaGACATACCCAATCACAGAATTACCCTTGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FAQFLLPSRRES*TYPITELPLLP Trigger: AGGAAGCAAGGGTAATTCTGTGATTGGGTATGTCAATGATTCTCTTCTAGACGGCAGGAGGAACTGAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561523.1 |
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