Pregenerated sensors for LINC02178 (Homo sapiens)

Ensembl gene IDs: ENSG00000261092

Ensembl transcript IDs: ENST00000566876.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGAGTCCTGATCAATATGGAAGCTGACTTGGTTACCAAGGGTGCCTaGTGTTGTGTTGACATCACCCTCACTCATAGGGGCTCAGTCTCT	+
Preference number: 5 (lower is better) Translates to: RVLINMEADLVTKGA*CCVDITLTHRGSVS Trigger: AGAGACTGAGCCCCTATGAGTGAGGGTGATGTCAACACAACAGCAGGCACCCTTGGTAACCAAGTCAGCTTCCATATTGATCAGGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566876.1
CDS TCA 90 bp	AAGTGTAGCCATGCCTACAACTCTCGTGCTGTATGTGCTTCTGACTaGGTCAATTACCTTTGCTTTTATAAAGATCCGAGTTTGGTTTCT	+
Preference number: 5 (lower is better) Translates to: KCSHAYNSRAVCASD*VNYLCFYKDPSLVS Trigger: AGAAACCAAACTCGGATCTTTATAAAAGCAAAGGTAATTGACTCAGTCAGAAGCACATACAGCACGAGAGTTGTAGGCATGGCTACACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566876.1
CDS TCA 72 bp	CTTTATGTCAGGTTTGCCAGATGGCTTGGGTCTTTCTaGGGTCCTGTACCGAGGGGGCACAGAGAGAACTGG	+
Preference number: 6 (lower is better) Translates to: LYVRFARWLGSF*GPVPRGHRENW Trigger: CCAGTTCTCTCTGTGCCCCCTCGGTACAGGACCTCAGAAAGACCCAAGCCATCTGGCAAACCTGACATAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566876.1
CDS CCA 72 bp	CGCGGCCGAGGCTCTAATGAAAGCCAGATAAAGGGATaGCTTAAGTGTAGCCATGCCTACAACTCTCGTGCT	+
Preference number: 6 (lower is better) Translates to: RGRGSNESQIKG*LKCSHAYNSRA Trigger: AGCACGAGAGTTGTAGGCATGGCTACACTTAAGCCATCCCTTTATCTGGCTTTCATTAGAGCCTCGGCCGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566876.1
CDS CCA 72 bp	TTTATTTTGTCTTTATGTCAGGTTTGCCAGATGGCTTaGGTCTTTCTGAGGTCCTGTACCGAGGGGGCACAG	+
Preference number: 6 (lower is better) Translates to: FILSLCQVCQMA*VFLRSCTEGAQ Trigger: CTGTGCCCCCTCGGTACAGGACCTCAGAAAGACCCAAGCCATCTGGCAAACCTGACATAAAGACAAAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566876.1
CDS CAA 72 bp	CTTTATTTTGTCTTTATGTCAGGTTTGCCAGATGGCTaGGGTCTTTCTGAGGTCCTGTACCGAGGGGGCACA	+
Preference number: 6 (lower is better) Translates to: LYFVFMSGLPDG*GLSEVLYRGGT Trigger: TGTGCCCCCTCGGTACAGGACCTCAGAAAGACCCAAGCCATCTGGCAAACCTGACATAAAGACAAAATAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566876.1
CDS CAA 72 bp	GCAATCAAAAGAGTCCTGATCAATATGGAAGCTGACTaGGTTACCAAGGGTGCCTGCTGTTGTGTTGACATC	+
Preference number: 6 (lower is better) Translates to: AIKRVLINMEAD*VTKGACCCVDI Trigger: GATGTCAACACAACAGCAGGCACCCTTGGTAACCAAGTCAGCTTCCATATTGATCAGGACTCTTTTGATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566876.1
CDS TCA 72 bp	CATGCCTACAACTCTCGTGCTGTATGTGCTTCTGACTaGGTCAATTACCTTTGCTTTTATAAAGATCCGAGT	+
Preference number: 6 (lower is better) Translates to: HAYNSRAVCASD*VNYLCFYKDPS Trigger: ACTCGGATCTTTATAAAAGCAAAGGTAATTGACTCAGTCAGAAGCACATACAGCACGAGAGTTGTAGGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566876.1

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