Pregenerated sensors for LINC02177 (Homo sapiens)
Ensembl gene IDs: ENSG00000261617Ensembl transcript IDs: ENST00000564305.1, ENST00000658945.1, ENST00000659361.1, ENST00000664064.1, ENST00000667976.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCGTCTGCAGACCACACTTTGAGGTCTCTTCTGACACTTTGTGCTaGGATGACAGCTGCTCAGGGGCTGGAGCAGTCCTCACCACTCCC | + |
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Preference number: 5 (lower is better) Translates to: LVCRPHFEVSSDTLC*DDSCSGAGAVLTTP Trigger: GGGAGTGGTGAGGACTGCTCCAGCCCCTGAGCAGCTGTCATCCCAGCACAAAGTGTCAGAAGAGACCTCAAAGTGTGGTCTGCAGACGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS GCA 90 bp | TGCCTCGTCTGCAGACCACACTTTGAGGTCTCTTCTGACACTTTGTaGTGGGATGACAGCTGCTCAGGGGCTGGAGCAGTCCTCACCACT | + |
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Preference number: 5 (lower is better) Translates to: CLVCRPHFEVSSDTL*WDDSCSGAGAVLTT Trigger: AGTGGTGAGGACTGCTCCAGCCCCTGAGCAGCTGTCATCCCAGCACAAAGTGTCAGAAGAGACCTCAAAGTGTGGTCTGCAGACGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 90 bp | GAACTGACTCGTCCAGGGGCCTTGGGCTCGCTACCAAATTGGTCTTaGGGCCACTTAGTGTCTGGAGGATCGTCATGGGCATCCTACAAG | + |
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Preference number: 5 (lower is better) Translates to: ELTRPGALGSLPNWS*GHLVSGGSSWASYK Trigger: CTTGTAGGATGCCCATGACGATCCTCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCCCCTGGACGAGTCAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS CCA 90 bp | AGACTAGAACTGACTCGTCCAGGGGCCTTGGGCTCGCTACCAAATTaGTCTTGGGGCCACTTAGTGTCTGGAGGATCGTCATGGGCATCC | + |
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Preference number: 5 (lower is better) Translates to: RLELTRPGALGSLPN*SWGHLVSGGSSWAS Trigger: GGATGCCCATGACGATCCTCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCCCCTGGACGAGTCAGTTCTAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS CCA 90 bp | GGCCTTGGGCTCGCTACCAAATTGGTCTTGGGGCCACTTAGTGTCTaGAGGATCGTCATGGGCATCCTACAAGACAGCCTCATAGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: GLGLATKLVLGPLSV*RIVMGILQDSLIEA Trigger: GGCTTCTATGAGGCTGTCTTGTAGGATGCCCATGACGATCCTCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS TCA 90 bp | GACTTGCCTAAAGTCTCATGGCTAGAGAGGAGCAGTGCCAGGAACTaGGACCCAGTCTGTCAACCTTGGGCAGCCAACCATTACTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: DLPKVSWLERSSARN*DPVCQPWAANHYSS Trigger: GGACGAGTAATGGTTGGCTGCCCAAGGTTGACAGACTGGGTCTCAGTTCCTGGCACTGCTCCTCTCTAGCCATGAGACTTTAGGCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS TCA 90 bp | ATGAATCATGTGGTTGTTGGCGGGACCCAGGTCCCCAGTGACTGTTaGCCAAAGACCTCTCAGTTCCCCACATATGCCATGGGCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: MNHVVVGGTQVPSDC*PKTSQFPTYAMGLC Trigger: ACAGAGGCCCATGGCATATGTGGGGAACTGAGAGGTCTTTGGTCAACAGTCACTGGGGACCTGGGTCCCGCCAACAACCACATGATTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664064.1 |
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| CDS GCA 90 bp | TGGAAAGGTGGCTGGCGTGGTCTTGCATACTTCCAAAATCTGCAATaGAACTCGATCGCCAGGTCCCGAGCCCTTAATGAGCCAGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: WKGGWRGLAYFQNLQ*NSIARSRALNEPAL Trigger: AAGGGCTGGCTCATTAAGGGCTCGGGACCTGGCGATCGAGTTGCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS GCA 90 bp | CCTTCTTTGCATGGTCTCTCCCTGGAAAGGTGGCTGGCGTGGTCTTaGATACTTCCAAAATCTGCAATGCAACTCGATCGCCAGGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: PSLHGLSLERWLAWS*ILPKSAMQLDRQVP Trigger: CGGGACCTGGCGATCGAGTTGCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 90 bp | CACCTGCCTTCTTTGCATGGTCTCTCCCTGGAAAGGTGGCTGGCGTaGTCTTGCATACTTCCAAAATCTGCAATGCAACTCGATCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: HLPSLHGLSLERWLA*SCILPKSAMQLDRQ Trigger: CTGGCGATCGAGTTGCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGAAGGCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 90 bp | ACTCCCAGCCCTTGGATCACCTGCCTTCTTTGCATGGTCTCTCCCTaGAAAGGTGGCTGGCGTGGTCTTGCATACTTCCAAAATCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: TPSPWITCLLCMVSP*KGGWRGLAYFQNLQ Trigger: TTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGAAGGCAGGTGATCCAAGGGCTGGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS GCA 90 bp | GCCCTTAATGAGCCAGCCCTTGATGTGAGTGTCAATCCTGCCATTTaGCTTGGTTTGACCCTCACTCCCCAATCAGGGAATGTTCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: ALNEPALDVSVNPAI*LGLTLTPQSGNVQG Trigger: TCCCTGAACATTCCCTGATTGGGGAGTGAGGGTCAAACCAAGGCAAATGGCAGGATTGACACTCACATCAAGGGCTGGCTCATTAAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 90 bp | CCCTTGGATCACCTGCCTTCTTTGCATGGTCTCTCCCTGGAAAGGTaGCTGGCGTGGTCTTGCATACTTCCAAAATCTGCAATGCAACTC | + |
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Preference number: 5 (lower is better) Translates to: PLDHLPSLHGLSLER*LAWSCILPKSAMQL Trigger: GAGTTGCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGAAGGCAGGTGATCCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 90 bp | ATGTCAGAGAACACAGTGTCTGAGCCTTCCTGCACCAGCCTCTCCTaGGGACTGTTTTGGTCCACGCTGTTTGCTCATGGATTAGATCAG | + |
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Preference number: 5 (lower is better) Translates to: MSENTVSEPSCTSLS*GLFWSTLFAHGLDQ Trigger: CTGATCTAATCCATGAGCAAACAGCGTGGACCAAAACAGTCCCCAGGAGAGGCTGGTGCAGGAAGGCTCAGACACTGTGTTCTCTGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667976.1 |
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| CDS CCA 90 bp | GGGCATCCTACAAGACAGCCTCATAGAAGCCAGTTCTGCATGGCTTaGGAGTCCTCAGGAAAGTTACAATCATGGTGGAAGGCACCTCTT | + |
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Preference number: 5 (lower is better) Translates to: GHPTRQPHRSQFCMA*ESSGKLQSWWKAPL Trigger: AAGAGGTGCCTTCCACCATGATTGTAACTTTCCTGAGGACTCCCAAGCCATGCAGAACTGGCTTCTATGAGGCTGTCTTGTAGGATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CCA 90 bp | GTCATGGGCATCCTACAAGACAGCCTCATAGAAGCCAGTTCTGCATaGCTTGGGAGTCCTCAGGAAAGTTACAATCATGGTGGAAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: VMGILQDSLIEASSA*LGSPQESYNHGGRH Trigger: GTGCCTTCCACCATGATTGTAACTTTCCTGAGGACTCCCAAGCCATGCAGAACTGGCTTCTATGAGGCTGTCTTGTAGGATGCCCATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CCA 90 bp | TGGATCACCTGCCTTCTTTGCATGGTCTCTCCCTGGAAAGGTGGCTaGCGTGGTCTTGCATACTTCCAAAATCTGCAATGCAACTCGATC | + |
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Preference number: 5 (lower is better) Translates to: WITCLLCMVSPWKGG*RGLAYFQNLQCNSI Trigger: GATCGAGTTGCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGAAGGCAGGTGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS TCA 90 bp | AACCATGAAATTAAAATCCCAGGTAGCACTGGCACCAAAAGAAGGTaGCACGTACAGAAGACTTGGGTCCAACCCTGGTCCTGGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: NHEIKIPGSTGTKRR*HVQKTWVQPWSWRQ Trigger: CTGCCTCCAGGACCAGGGTTGGACCCAAGTCTTCTGTACGTGTCACCTTCTTTTGGTGCCAGTGCTACCTGGGATTTTAATTTCATGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CCA 90 bp | GATAGACACAGCCCTAGGCTAGTCAGTGAGGATATGAGAGCTTTTTaGAGCACTAGCAGCATCAGATTGGAGTGTGATGAGAAGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: DRHSPRLVSEDMRAF*STSSIRLECDEKLL Trigger: CAGCAGCTTCTCATCACACTCCAATCTGATGCTGCTAGTGCTCCAAAAAGCTCTCATATCCTCACTGACTAGCCTAGGGCTGTGTCTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS GCA 90 bp | TGCATGCATGTGCATGTGCAATGTGTGTCTGCATGTTCAAGTCTGTaGATGTGTGTGTGCTGTCTCCATCTTCTCTTCTCCTCCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: CMHVHVQCVSACSSL*MCVCCLHLLFSSTF Trigger: GAAAGTGGAGGAGAAGAGAAGATGGAGACAGCACACACACATGCACAGACTTGAACATGCAGACACACATTGCACATGCACATGCATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564305.1 ENST00000659361.1 |
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| CDS GCA 90 bp | CCTCTCGCTTCAATTTGTAAAGGTCGAATGCACAATCCAGGTCTCTaGAAATCTTCCAACCTCAAGTCCAGCCCTCCACTGTCTTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: PLASICKGRMHNPGL*KSSNLKSSPPLSFN Trigger: GTTGAAAGACAGTGGAGGGCTGGACTTGAGGTTGGAAGATTTGCAGAGACCTGGATTGTGCATTCGACCTTTACAAATTGAAGCGAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CCA 90 bp | TATCCTACTGACCTTGCACCAGAGACATTTTACCCTACCCTGCATTaGTTTAGCCATCACTATGCCAGCAGACTGTGTGTGTACATGTGT | + |
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Preference number: 5 (lower is better) Translates to: YPTDLAPETFYPTLH*FSHHYASRLCVYMC Trigger: ACACATGTACACACACAGTCTGCTGGCATAGTGATGGCTAAACCAATGCAGGGTAGGGTAAAATGTCTCTGGTGCAAGGTCAGTAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS GCA 90 bp | GATTTTATCCTACTGACCTTGCACCAGAGACATTTTACCCTACCCTaGATTGGTTTAGCCATCACTATGCCAGCAGACTGTGTGTGTACA | + |
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Preference number: 5 (lower is better) Translates to: DFILLTLHQRHFTLP*IGLAITMPADCVCT Trigger: TGTACACACACAGTCTGCTGGCATAGTGATGGCTAAACCAATGCAGGGTAGGGTAAAATGTCTCTGGTGCAAGGTCAGTAGGATAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS TCA 90 bp | GGAGACACTGATACCCCACAGAGGAGTGTTGTTAAGCATTCCATTTaGTCCTGCAGATTTTATCCTACTGACCTTGCACCAGAGACATTT | + |
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Preference number: 5 (lower is better) Translates to: GDTDTPQRSVVKHSI*SCRFYPTDLAPETF Trigger: AAATGTCTCTGGTGCAAGGTCAGTAGGATAAAATCTGCAGGATCAAATGGAATGCTTAACAACACTCCTCTGTGGGGTATCAGTGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CCA 90 bp | CAGCAAACCTATAAACTGAATGCTTTCATTCTCCTTTTTATAGAGTaGAATCCTGATGTTCAGAGATGCAAAGCCTCTCGCTTCAATTTG | + |
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Preference number: 5 (lower is better) Translates to: QQTYKLNAFILLFIE*NPDVQRCKASRFNL Trigger: CAAATTGAAGCGAGAGGCTTTGCATCTCTGAACATCAGGATTCCACTCTATAAAAAGGAGAATGAAAGCATTCAGTTTATAGGTTTGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CAA 72 bp | CCTCACCACTCCCAGCCCTTGGATCACCTGCCTTCTTaGCATGGTCTCTCCCTGGAAAGGTGGCTGGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: PHHSQPLDHLPS*HGLSLERWLAW Trigger: CCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGAAGGCAGGTGATCCAAGGGCTGGGAGTGGTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS GCA 72 bp | CTCACCACTCCCAGCCCTTGGATCACCTGCCTTCTTTaGATGGTCTCTCCCTGGAAAGGTGGCTGGCGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LTTPSPWITCLL*MVSPWKGGWRG Trigger: ACCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGAAGGCAGGTGATCCAAGGGCTGGGAGTGGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS GCA 72 bp | GAGGTCTCTTCTGACACTTTGTGCTGGGATGACAGCTaGTCAGGGGCTGGAGCAGTCCTCACCACTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: EVSSDTLCWDDS*SGAGAVLTTPS Trigger: GCTGGGAGTGGTGAGGACTGCTCCAGCCCCTGAGCAGCTGTCATCCCAGCACAAAGTGTCAGAAGAGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 72 bp | CGTCCAGGGGCCTTGGGCTCGCTACCAAATTGGTCTTaGGGCCACTTAGTGTCTGGAGGATCGTCATGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RPGALGSLPNWS*GHLVSGGSSWA Trigger: TGCCCATGACGATCCTCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCCCCTGGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS CAA 72 bp | TCGTCCAGGGGCCTTGGGCTCGCTACCAAATTGGTCTaGGGGCCACTTAGTGTCTGGAGGATCGTCATGGGC | + |
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Preference number: 6 (lower is better) Translates to: SSRGLGLATKLV*GPLSVWRIVMG Trigger: GCCCATGACGATCCTCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCCCCTGGACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS CAA 90 bp | TGCTGCCTCGTCTGCAGACCACACTTTGAGGTCTCTTCTGACACTTaGTGCTGGGATGACAGCTGCTCAGGGGCTGGAGCAGTCCTCACC | + |
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Preference number: 6 (lower is better) Translates to: CCLVCRPHFEVSSDT*CWDDSCSGAGAVLT Trigger: GGTGAGGACTGCTCCAGCCCCTGAGCAGCTGTCATCCCAGCACAAAGTGTCAGAAGAGACCTCAAAGTGTGGTCTGCAGACGAGGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 72 bp | CTGACTCGTCCAGGGGCCTTGGGCTCGCTACCAAATTaGTCTTGGGGCCACTTAGTGTCTGGAGGATCGTCA | + |
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Preference number: 6 (lower is better) Translates to: LTRPGALGSLPN*SWGHLVSGGSS Trigger: TGACGATCCTCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCCCCTGGACGAGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS CAA 72 bp | ACTGACTCGTCCAGGGGCCTTGGGCTCGCTACCAAATaGGTCTTGGGGCCACTTAGTGTCTGGAGGATCGTC | + |
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Preference number: 6 (lower is better) Translates to: TDSSRGLGLATK*VLGPLSVWRIV Trigger: GACGATCCTCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCCCCTGGACGAGTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS CAA 90 bp | CAGACTAGAACTGACTCGTCCAGGGGCCTTGGGCTCGCTACCAAATaGGTCTTGGGGCCACTTAGTGTCTGGAGGATCGTCATGGGCATC | + |
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Preference number: 6 (lower is better) Translates to: QTRTDSSRGLGLATK*VLGPLSVWRIVMGI Trigger: GATGCCCATGACGATCCTCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCCCCTGGACGAGTCAGTTCTAGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS CAA 90 bp | CAGTCAGCTCCTGTCTCCAGACTAGAACTGACTCGTCCAGGGGCCTaGGGCTCGCTACCAAATTGGTCTTGGGGCCACTTAGTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QSAPVSRLELTRPGA*GSLPNWSWGHLVSG Trigger: TCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCCCCTGGACGAGTCAGTTCTAGTCTGGAGACAGGAGCTGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS CAA 72 bp | CACTGGCACCAAAAGAAGGTGACACGTACAGAAGACTaGGGTCCAACCCTGGTCCTGGAGGCAGGTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: HWHQKKVTRTED*GPTLVLEAGPA Trigger: AGCTGGACCTGCCTCCAGGACCAGGGTTGGACCCAAGTCTTCTGTACGTGTCACCTTCTTTTGGTGCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CAA 72 bp | CCTGTCTCCAGACTAGAACTGACTCGTCCAGGGGCCTaGGGCTCGCTACCAAATTGGTCTTGGGGCCACTTA | + |
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Preference number: 6 (lower is better) Translates to: PVSRLELTRPGA*GSLPNWSWGHL Trigger: TAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCCCCTGGACGAGTCAGTTCTAGTCTGGAGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS CAA 90 bp | AGAACTGACTCGTCCAGGGGCCTTGGGCTCGCTACCAAATTGGTCTaGGGGCCACTTAGTGTCTGGAGGATCGTCATGGGCATCCTACAA | + |
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Preference number: 6 (lower is better) Translates to: RTDSSRGLGLATKLV*GPLSVWRIVMGILQ Trigger: TTGTAGGATGCCCATGACGATCCTCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAGCCCAAGGCCCCTGGACGAGTCAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS GCA 72 bp | TGCAGACCACACTTTGAGGTCTCTTCTGACACTTTGTaGTGGGATGACAGCTGCTCAGGGGCTGGAGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: CRPHFEVSSDTL*WDDSCSGAGAV Trigger: GACTGCTCCAGCCCCTGAGCAGCTGTCATCCCAGCACAAAGTGTCAGAAGAGACCTCAAAGTGTGGTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 72 bp | AACACAGTGTCTGAGCCTTCCTGCACCAGCCTCTCCTaGGGACTGTTTTGGTCCACGCTGTTTGCTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: NTVSEPSCTSLS*GLFWSTLFAHG Trigger: TCCATGAGCAAACAGCGTGGACCAAAACAGTCCCCAGGAGAGGCTGGTGCAGGAAGGCTCAGACACTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 72 bp | GTTGACCAAAGACCTCTCAGTTCCCCACATATGCCATaGGCCTCTGTAATTCCACACTTGGAGAGGCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: VDQRPLSSPHMP*ASVIPHLERRG Trigger: CCCCCGCCTCTCCAAGTGTGGAATTACAGAGGCCCATGGCATATGTGGGGAACTGAGAGGTCTTTGGTCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664064.1 |
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| CDS CCA 72 bp | GAGCCTTCCTGCACCAGCCTCTCCTGGGGACTGTTTTaGTCCACGCTGTTTGCTCATGGATTAGATCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: EPSCTSLSWGLF*STLFAHGLDQH Trigger: GTGCTGATCTAATCCATGAGCAAACAGCGTGGACCAAAACAGTCCCCAGGAGAGGCTGGTGCAGGAAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667976.1 |
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| CDS CAA 90 bp | GCCTTCTTTGCATGGTCTCTCCCTGGAAAGGTGGCTGGCGTGGTCTaGCATACTTCCAAAATCTGCAATGCAACTCGATCGCCAGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: AFFAWSLPGKVAGVV*HTSKICNATRSPGP Trigger: GGGACCTGGCGATCGAGTTGCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS TCA 72 bp | AAAGTCTCATGGCTAGAGAGGAGCAGTGCCAGGAACTaGGACCCAGTCTGTCAACCTTGGGCAGCCAACCAT | + |
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Preference number: 6 (lower is better) Translates to: KVSWLERSSARN*DPVCQPWAANH Trigger: ATGGTTGGCTGCCCAAGGTTGACAGACTGGGTCTCAGTTCCTGGCACTGCTCCTCTCTAGCCATGAGACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS GCA 72 bp | GGCTGGCGTGGTCTTGCATACTTCCAAAATCTGCAATaGAACTCGATCGCCAGGTCCCGAGCCCTTAATGAG | + |
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Preference number: 6 (lower is better) Translates to: GWRGLAYFQNLQ*NSIARSRALNE Trigger: CTCATTAAGGGCTCGGGACCTGGCGATCGAGTTGCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 72 bp | CCTTGGATCACCTGCCTTCTTTGCATGGTCTCTCCCTaGAAAGGTGGCTGGCGTGGTCTTGCATACTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: PWITCLLCMVSP*KGGWRGLAYFQ Trigger: TTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGAAGGCAGGTGATCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 72 bp | CTCGCTACCAAATTGGTCTTGGGGCCACTTAGTGTCTaGAGGATCGTCATGGGCATCCTACAAGACAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LATKLVLGPLSV*RIVMGILQDSL Trigger: GAGGCTGTCTTGTAGGATGCCCATGACGATCCTCCAGACACTAAGTGGCCCCAAGACCAATTTGGTAGCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658945.1 |
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| CDS GCA 72 bp | GAGCCAGCCCTTGATGTGAGTGTCAATCCTGCCATTTaGCTTGGTTTGACCCTCACTCCCCAATCAGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: EPALDVSVNPAI*LGLTLTPQSGN Trigger: ATTCCCTGATTGGGGAGTGAGGGTCAAACCAAGGCAAATGGCAGGATTGACACTCACATCAAGGGCTGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS GCA 72 bp | CATGGTCTCTCCCTGGAAAGGTGGCTGGCGTGGTCTTaGATACTTCCAAAATCTGCAATGCAACTCGATCGC | + |
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Preference number: 6 (lower is better) Translates to: HGLSLERWLAWS*ILPKSAMQLDR Trigger: GCGATCGAGTTGCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CAA 72 bp | GCATGGTCTCTCCCTGGAAAGGTGGCTGGCGTGGTCTaGCATACTTCCAAAATCTGCAATGCAACTCGATCG | + |
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Preference number: 6 (lower is better) Translates to: AWSLPGKVAGVV*HTSKICNATRS Trigger: CGATCGAGTTGCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CAA 72 bp | GGTGATGCAGATGCTGCCTCGTCTGCAGACCACACTTaGAGGTCTCTTCTGACACTTTGTGCTGGGATGACA | + |
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Preference number: 6 (lower is better) Translates to: GDADAASSADHT*RSLLTLCAGMT Trigger: TGTCATCCCAGCACAAAGTGTCAGAAGAGACCTCAAAGTGTGGTCTGCAGACGAGGCAGCATCTGCATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 72 bp | TGCCTTCTTTGCATGGTCTCTCCCTGGAAAGGTGGCTaGCGTGGTCTTGCATACTTCCAAAATCTGCAATGC | + |
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Preference number: 6 (lower is better) Translates to: CLLCMVSPWKGG*RGLAYFQNLQC Trigger: GCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 72 bp | TCTTTGCATGGTCTCTCCCTGGAAAGGTGGCTGGCGTaGTCTTGCATACTTCCAAAATCTGCAATGCAACTC | + |
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Preference number: 6 (lower is better) Translates to: SLHGLSLERWLA*SCILPKSAMQL Trigger: GAGTTGCATTGCAGATTTTGGAAGTATGCAAGACCACGCCAGCCACCTTTCCAGGGAGAGACCATGCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 72 bp | GACCTTGCACCAGAGACATTTTACCCTACCCTGCATTaGTTTAGCCATCACTATGCCAGCAGACTGTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: DLAPETFYPTLH*FSHHYASRLCV Trigger: CACACACAGTCTGCTGGCATAGTGATGGCTAAACCAATGCAGGGTAGGGTAAAATGTCTCTGGTGCAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CAA 72 bp | CTTGATGTGAGTGTCAATCCTGCCATTTGCCTTGGTTaGACCCTCACTCCCCAATCAGGGAATGTTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LDVSVNPAICLG*TLTPQSGNVQG Trigger: TCCCTGAACATTCCCTGATTGGGGAGTGAGGGTCAAACCAAGGCAAATGGCAGGATTGACACTCACATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CAA 90 bp | GAGCCAGCCCTTGATGTGAGTGTCAATCCTGCCATTTGCCTTGGTTaGACCCTCACTCCCCAATCAGGGAATGTTCAGGGATTTACTAAT | + |
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Preference number: 6 (lower is better) Translates to: EPALDVSVNPAICLG*TLTPQSGNVQGFTN Trigger: ATTAGTAAATCCCTGAACATTCCCTGATTGGGGAGTGAGGGTCAAACCAAGGCAAATGGCAGGATTGACACTCACATCAAGGGCTGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS GCA 72 bp | GTGCATGTGCAATGTGTGTCTGCATGTTCAAGTCTGTaGATGTGTGTGTGCTGTCTCCATCTTCTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VHVQCVSACSSL*MCVCCLHLLFS Trigger: GGAGAAGAGAAGATGGAGACAGCACACACACATGCACAGACTTGAACATGCAGACACACATTGCACATGCAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564305.1 ENST00000659361.1 |
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| CDS GCA 72 bp | CTACTGACCTTGCACCAGAGACATTTTACCCTACCCTaGATTGGTTTAGCCATCACTATGCCAGCAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: LLTLHQRHFTLP*IGLAITMPADC Trigger: ACAGTCTGCTGGCATAGTGATGGCTAAACCAATGCAGGGTAGGGTAAAATGTCTCTGGTGCAAGGTCAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CCA 72 bp | ACAAGACAGCCTCATAGAAGCCAGTTCTGCATGGCTTaGGAGTCCTCAGGAAAGTTACAATCATGGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TRQPHRSQFCMA*ESSGKLQSWWK Trigger: CTTCCACCATGATTGTAACTTTCCTGAGGACTCCCAAGCCATGCAGAACTGGCTTCTATGAGGCTGTCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CCA 72 bp | AGCCCTAGGCTAGTCAGTGAGGATATGAGAGCTTTTTaGAGCACTAGCAGCATCAGATTGGAGTGTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: SPRLVSEDMRAF*STSSIRLECDE Trigger: CTCATCACACTCCAATCTGATGCTGCTAGTGCTCCAAAAAGCTCTCATATCCTCACTGACTAGCCTAGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000564305.1 ENST00000658945.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CAA 90 bp | GACTTTCCCTGCCTATTGAAGTTGAGTTTGGACCTGTGGCTGGCTTaGGCCTATAGGATGTTAGGCTTTAAAAGTGTTCACGTGGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: DFPCLLKLSLDLWLA*AYRMLGFKSVHVVG Trigger: GCCAACCACGTGAACACTTTTAAAGCCTAACATCCTATAGGCCAAAGCCAGCCACAGGTCCAAACTCAACTTCAATAGGCAGGGAAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS GCA 72 bp | AGTCACTGCGCCTGGCCATATGGAGCACTTTCTATGTaGCATGCACTAAGTCTCAAGTATAAGGCAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: SHCAWPYGALSM*HALSLKYKAGK Trigger: TTTTCCTGCCTTATACTTGAGACTTAGTGCATGGCACATAGAAAGTGCTCCATATGGCCAGGCGCAGTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564305.1 ENST00000659361.1 |
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| CDS GCA 72 bp | TCAATTTGTAAAGGTCGAATGCACAATCCAGGTCTCTaGAAATCTTCCAACCTCAAGTCCAGCCCTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: SICKGRMHNPGL*KSSNLKSSPPL Trigger: CAGTGGAGGGCTGGACTTGAGGTTGGAAGATTTGCAGAGACCTGGATTGTGCATTCGACCTTTACAAATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CCA 72 bp | ATCCTACAAGACAGCCTCATAGAAGCCAGTTCTGCATaGCTTGGGAGTCCTCAGGAAAGTTACAATCATGGT | + |
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Preference number: 6 (lower is better) Translates to: ILQDSLIEASSA*LGSPQESYNHG Trigger: ACCATGATTGTAACTTTCCTGAGGACTCCCAAGCCATGCAGAACTGGCTTCTATGAGGCTGTCTTGTAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CAA 72 bp | TTCCACTTACAGGTCTTAGGAAAGCCAGGTGTCCCTTaGGGCCTTAGTTTTCTCATCTTAGTGTCTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: FHLQVLGKPGVP*GLSFLILVSGG Trigger: TCCTCCAGACACTAAGATGAGAAAACTAAGGCCCAAAGGGACACCTGGCTTTCCTAAGACCTGTAAGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000564305.1 ENST00000659361.1 ENST00000664064.1 ENST00000667976.1 |
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| CDS CCA 72 bp | GACTTTCCCTGCCTATTGAAGTTGAGTTTGGACCTGTaGCTGGCTTTGGCCTATAGGATGTTAGGCTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: DFPCLLKLSLDL*LALAYRMLGFK Trigger: TTTAAAGCCTAACATCCTATAGGCCAAAGCCAGCCACAGGTCCAAACTCAACTTCAATAGGCAGGGAAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS TCA 72 bp | GATACCCCACAGAGGAGTGTTGTTAAGCATTCCATTTaGTCCTGCAGATTTTATCCTACTGACCTTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: DTPQRSVVKHSI*SCRFYPTDLAP Trigger: TGGTGCAAGGTCAGTAGGATAAAATCTGCAGGATCAAATGGAATGCTTAACAACACTCCTCTGTGGGGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS GCA 72 bp | TGTATGGGCATATGTGTGTCTGTGTGTGCATACATTTaGACAAGTGTGTATACATGTGGCTGTGTGTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: CMGICVSVCAYI*TSVYTCGCVCA Trigger: TGCACACACACAGCCACATGTATACACACTTGTGCAAATGTATGCACACACAGACACACATATGCCCATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS GCA 72 bp | ATGCAAAGCCTCTCGCTTCAATTTGTAAAGGTCGAATaGACAATCCAGGTCTCTGCAAATCTTCCAACCTCA | + |
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Preference number: 6 (lower is better) Translates to: MQSLSLQFVKVE*TIQVSANLPTS Trigger: TGAGGTTGGAAGATTTGCAGAGACCTGGATTGTGCATTCGACCTTTACAAATTGAAGCGAGAGGCTTTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CAA 72 bp | ATGTATGGGCATATGTGTGTCTGTGTGTGCATACATTaGCACAAGTGTGTATACATGTGGCTGTGTGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: MYGHMCVCVCIH*HKCVYMWLCVC Trigger: GCACACACACAGCCACATGTATACACACTTGTGCAAATGTATGCACACACAGACACACATATGCCCATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CAA 72 bp | TGCCTATTGAAGTTGAGTTTGGACCTGTGGCTGGCTTaGGCCTATAGGATGTTAGGCTTTAAAAGTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: CLLKLSLDLWLA*AYRMLGFKSVH Trigger: GTGAACACTTTTAAAGCCTAACATCCTATAGGCCAAAGCCAGCCACAGGTCCAAACTCAACTTCAATAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CAA 72 bp | GCAGATTTCTTGGGGAAAAGGTTCCAGGCAGAGGGATaGTATATTTGCAGTTGTACAACCATAACCACATCG | + |
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Preference number: 6 (lower is better) Translates to: ADFLGKRFQAEG*YICSCTTITTS Trigger: CGATGTGGTTATGGTTGTACAACTGCAAATATACAATCCCTCTGCCTGGAACCTTTTCCCCAAGAAATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CAA 90 bp | TTGTTAAGCATTCCATTTGATCCTGCAGATTTTATCCTACTGACCTaGCACCAGAGACATTTTACCCTACCCTGCATTGGTTTAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: LLSIPFDPADFILLT*HQRHFTLPCIGLAI Trigger: GATGGCTAAACCAATGCAGGGTAGGGTAAAATGTCTCTGGTGCAAGGTCAGTAGGATAAAATCTGCAGGATCAAATGGAATGCTTAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564305.1 |
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| CDS CAA 90 bp | ACAGTATACAGAACAGTCAAAATTATCTCTCATTCAGCTGTAACTTaGTATCCACCAACCAGCCTCTCCCTATCTTCTCTTCCTCTACTC | + |
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Preference number: 6 (lower is better) Translates to: TVYRTVKIISHSAVT*YPPTSLSLSSLPLL Trigger: GAGTAGAGGAAGAGAAGATAGGGAGAGGCTGGTTGGTGGATACAAAGTTACAGCTGAATGAGAGATAATTTTGACTGTTCTGTATACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564305.1 ENST00000659361.1 |
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