Pregenerated sensors for LINC02175 (Homo sapiens)
Ensembl gene IDs: ENSG00000262155Ensembl transcript IDs: ENST00000571219.1, ENST00000653156.1, ENST00000654253.1, ENST00000654349.1, ENST00000655561.1, ENST00000657497.1, ENST00000657680.1, ENST00000657697.1, ENST00000658101.1, ENST00000658831.1, ENST00000660807.1, ENST00000665669.1, ENST00000666471.1, ENST00000667339.1, ENST00000668238.1, ENST00000670692.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTAGCAGTGAGAGTTGAAAACCGCTCGGCGCGCGGCAAGAGAGGATaGAGCCCGAGTCTGACCTGGGAAGGGAGCTGCTCCCCGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LAVRVENRSARGKRG*SPSLTWEGSCSPGS Trigger: ACTGCCCGGGGAGCAGCTCCCTTCCCAGGTCAGACTCGGGCTTCATCCTCTCTTGCCGCGCGCCGAGCGGTTTTCAACTCTCACTGCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000571219.1 ENST00000653156.1 ENST00000654253.1 ENST00000654349.1 ENST00000655561.1 ENST00000657680.1 ENST00000657697.1 ENST00000658101.1 ENST00000658831.1 ENST00000665669.1 ENST00000666471.1 ENST00000667339.1 ENST00000668238.1 ENST00000670692.1 |
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| CDS GCA 90 bp | AGCCCAGCTGAGCTTGGAGGCCATGAAATGCTGGCAGCCCCACACTaGAAGACTGCAGGGTCTTTCTGGGCCACGCCCCGAATCCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SPAELGGHEMLAAPH*KTAGSFWATPRIPG Trigger: ACCTGGGATTCGGGGCGTGGCCCAGAAAGACCCTGCAGTCTTGCAGTGTGGGGCTGCCAGCATTTCATGGCCTCCAAGCTCAGCTGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS CCA 90 bp | CCCTTGGTGGAGGAAGGAACTCCGATGAGACTCAACAGGGCTTGCTaGGGCCGGAGGGTGAGGGCGAATGGCAAACAGCATGGGGAACTT | + |
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Preference number: 5 (lower is better) Translates to: PLVEEGTPMRLNRAC*GRRVRANGKQHGEL Trigger: AAGTTCCCCATGCTGTTTGCCATTCGCCCTCACCCTCCGGCCCCAGCAAGCCCTGTTGAGTCTCATCGGAGTTCCTTCCTCCACCAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS TCA 90 bp | AGTTCTCAACGCTGGGAAGTCCAAGGTCAAGGGGCCCACATCTGGTaGGGGCCTTCTTGCTGCATCATCCCATGGTGGAAGGTGGACGGG | + |
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Preference number: 5 (lower is better) Translates to: SSQRWEVQGQGAHIW*GPSCCIIPWWKVDG Trigger: CCCGTCCACCTTCCACCATGGGATGATGCAGCAAGAAGGCCCTCACCAGATGTGGGCCCCTTGACCTTGGACTTCCCAGCGTTGAGAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668238.1 |
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| CDS GCA 90 bp | TATCCCTTGGTGGAGGAAGGAACTCCGATGAGACTCAACAGGGCTTaGTGGGGCCGGAGGGTGAGGGCGAATGGCAAACAGCATGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: YPLVEEGTPMRLNRA*WGRRVRANGKQHGE Trigger: TTCCCCATGCTGTTTGCCATTCGCCCTCACCCTCCGGCCCCAGCAAGCCCTGTTGAGTCTCATCGGAGTTCCTTCCTCCACCAAGGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS TCA 90 bp | GGTCCTGCTATCCTGGGTGGTTGGAGGAATTCTAGCAGTGAGAGTTaGAAACCGCTCGGCGCGCGGCAAGAGAGGATGAAGCCCGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: GPAILGGWRNSSSES*KPLGARQERMKPES Trigger: AGACTCGGGCTTCATCCTCTCTTGCCGCGCGCCGAGCGGTTTTCAACTCTCACTGCTAGAATTCCTCCAACCACCCAGGATAGCAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000571219.1 ENST00000653156.1 ENST00000654253.1 ENST00000654349.1 ENST00000655561.1 ENST00000657680.1 ENST00000657697.1 ENST00000658101.1 ENST00000658831.1 ENST00000665669.1 ENST00000666471.1 ENST00000667339.1 ENST00000668238.1 ENST00000670692.1 |
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| CDS GCA 90 bp | TTCTTGAACCACAGTGGTGAATGTCTTTCTGGACAAGAGTGCCAGTaGCCACCGCCATCACAGGACACAGCCCCATCCGCACTCCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: FLNHSGECLSGQECQ*PPPSQDTAPSALPG Trigger: TCCCGGGAGTGCGGATGGGGCTGTGTCCTGTGATGGCGGTGGGCACTGGCACTCTTGTCCAGAAAGACATTCACCACTGTGGTTCAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS GCA 90 bp | AGGTGCTTCTTGAACCACAGTGGTGAATGTCTTTCTGGACAAGAGTaGCAGTGCCCACCGCCATCACAGGACACAGCCCCATCCGCACTC | + |
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Preference number: 5 (lower is better) Translates to: RCFLNHSGECLSGQE*QCPPPSQDTAPSAL Trigger: GAGTGCGGATGGGGCTGTGTCCTGTGATGGCGGTGGGCACTGGCACTCTTGTCCAGAAAGACATTCACCACTGTGGTTCAAGAAGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS CCA 90 bp | GACGCTCCGGGTCATGGGTGGCCATGTATCTCGGTCCTGCTATCCTaGGTGGTTGGAGGAATTCTAGCAGTGAGAGTTGAAAACCGCTCG | + |
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Preference number: 5 (lower is better) Translates to: DAPGHGWPCISVLLS*VVGGILAVRVENRS Trigger: CGAGCGGTTTTCAACTCTCACTGCTAGAATTCCTCCAACCACCCAGGATAGCAGGACCGAGATACATGGCCACCCATGACCCGGAGCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000571219.1 ENST00000653156.1 ENST00000654253.1 ENST00000654349.1 ENST00000655561.1 ENST00000657497.1 ENST00000657680.1 ENST00000657697.1 ENST00000658101.1 ENST00000658831.1 ENST00000665669.1 ENST00000666471.1 ENST00000667339.1 ENST00000668238.1 ENST00000670692.1 |
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| CDS CCA 90 bp | CATGAAATGCTGGCAGCCCCACACTGCAAGACTGCAGGGTCTTTCTaGGCCACGCCCCGAATCCCAGGTATGGAAGTGAAGGACCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: HEMLAAPHCKTAGSF*ATPRIPGMEVKDPK Trigger: TTTTGGGTCCTTCACTTCCATACCTGGGATTCGGGGCGTGGCCCAGAAAGACCCTGCAGTCTTGCAGTGTGGGGCTGCCAGCATTTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS CCA 90 bp | GGGCCGGAGGGTGAGGGCGAATGGCAAACAGCATGGGGAACTTTTTaGATGATGGAAACGTTCAGTGTCCTCCTCAGGGTACTGCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: GPEGEGEWQTAWGTF*MMETFSVLLRVLLR Trigger: CCTAAGCAGTACCCTGAGGAGGACACTGAACGTTTCCATCATCCAAAAAGTTCCCCATGCTGTTTGCCATTCGCCCTCACCCTCCGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS CCA 90 bp | ACATCTGGTGAGGGCCTTCTTGCTGCATCATCCCATGGTGGAAGGTaGACGGGCAAGAGGGCATGCTTGCCTCTTCCCTTGCTCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TSGEGLLAASSHGGR*TGKRACLPLPLLFS Trigger: AGAAAAGAGCAAGGGAAGAGGCAAGCATGCCCTCTTGCCCGTCCACCTTCCACCATGGGATGATGCAGCAAGAAGGCCCTCACCAGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668238.1 |
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| CDS TCA 90 bp | CTGCAGGGTCTTTCTGGGCCACGCCCCGAATCCCAGGTATGGAAGTaGAGGACCCAAAAAGAGGAACGAATCAGGCTGTTATTCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LQGLSGPRPESQVWK*RTQKEERIRLLFCR Trigger: TCTGCAGAATAACAGCCTGATTCGTTCCTCTTTTTGGGTCCTTCACTTCCATACCTGGGATTCGGGGCGTGGCCCAGAAAGACCCTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS TCA 90 bp | CGGAGGGTGAGGGCGAATGGCAAACAGCATGGGGAACTTTTTGGATaGTGGAAACGTTCAGTGTCCTCCTCAGGGTACTGCTTAGGCACA | + |
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Preference number: 5 (lower is better) Translates to: RRVRANGKQHGELFG*WKRSVSSSGYCLGT Trigger: TGTGCCTAAGCAGTACCCTGAGGAGGACACTGAACGTTTCCATCATCCAAAAAGTTCCCCATGCTGTTTGCCATTCGCCCTCACCCTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS TCA 90 bp | TTTTTAAAATGGTCTCACAGATTTCCTGGTCATCGGTATTTCATCTaGAAAGTCTCTTTCTGTGATATCTGCTCATTAGAGCGGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: FLKWSHRFPGHRYFI*KVSFCDICSLERSS Trigger: AGAACTCCGCTCTAATGAGCAGATATCACAGAAAGAGACTTTTCAGATGAAATACCGATGACCAGGAAATCTGTGAGACCATTTTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS TCA 90 bp | CAGATTTCCTGGTCATCGGTATTTCATCTGAAAAGTCTCTTTCTGTaGTATCTGCTCATTAGAGCGGAGTTCTTAAAATTATTAGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: QISWSSVFHLKSLFL*YLLIRAEFLKLLES Trigger: ACTCTCTAATAATTTTAAGAACTCCGCTCTAATGAGCAGATATCACAGAAAGAGACTTTTCAGATGAAATACCGATGACCAGGAAATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS CCA 72 bp | CAGGGCTGGCGGGGAGGCGGCCTCGGTCAGCCCAGTTaGTCTCGGGCCGCTGGGCCTCAGCCCCCAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: QGWRGGGLGQPS*SRAAGPQPPSL Trigger: CAGGCTTGGGGGCTGAGGCCCAGCGGCCCGAGACCAACTGGGCTGACCGAGGCCGCCTCCCCGCCAGCCCTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000571219.1 ENST00000653156.1 ENST00000654253.1 ENST00000654349.1 ENST00000655561.1 ENST00000657680.1 ENST00000657697.1 ENST00000658101.1 ENST00000658831.1 |
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| CDS TCA 72 bp | AGAGTTGAAAACCGCTCGGCGCGCGGCAAGAGAGGATaGAGCCCGAGTCTGACCTGGGAAGGGAGCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RVENRSARGKRG*SPSLTWEGSCS Trigger: GGAGCAGCTCCCTTCCCAGGTCAGACTCGGGCTTCATCCTCTCTTGCCGCGCGCCGAGCGGTTTTCAACTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000571219.1 ENST00000653156.1 ENST00000654253.1 ENST00000654349.1 ENST00000655561.1 ENST00000657680.1 ENST00000657697.1 ENST00000658101.1 ENST00000658831.1 ENST00000665669.1 ENST00000666471.1 ENST00000667339.1 ENST00000668238.1 ENST00000670692.1 |
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| CDS GCA 72 bp | GAGCTTGGAGGCCATGAAATGCTGGCAGCCCCACACTaGAAGACTGCAGGGTCTTTCTGGGCCACGCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: ELGGHEMLAAPH*KTAGSFWATPR Trigger: TCGGGGCGTGGCCCAGAAAGACCCTGCAGTCTTGCAGTGTGGGGCTGCCAGCATTTCATGGCCTCCAAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS GCA 72 bp | GTGGAGGAAGGAACTCCGATGAGACTCAACAGGGCTTaGTGGGGCCGGAGGGTGAGGGCGAATGGCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: VEEGTPMRLNRA*WGRRVRANGKQ Trigger: CTGTTTGCCATTCGCCCTCACCCTCCGGCCCCAGCAAGCCCTGTTGAGTCTCATCGGAGTTCCTTCCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS CCA 72 bp | TGCCTGTCCCTGGAAGTGGACGCTCCGGGTCATGGGTaGCCATGTATCTCGGTCCTGCTATCCTGGGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: CLSLEVDAPGHG*PCISVLLSWVV Trigger: AACCACCCAGGATAGCAGGACCGAGATACATGGCCACCCATGACCCGGAGCGTCCACTTCCAGGGACAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000571219.1 ENST00000653156.1 ENST00000654253.1 ENST00000654349.1 ENST00000655561.1 ENST00000657497.1 ENST00000657680.1 ENST00000657697.1 ENST00000658101.1 ENST00000658831.1 ENST00000665669.1 ENST00000666471.1 ENST00000667339.1 ENST00000668238.1 ENST00000670692.1 |
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| CDS CCA 72 bp | CTGGCAGCCCCACACTGCAAGACTGCAGGGTCTTTCTaGGCCACGCCCCGAATCCCAGGTATGGAAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LAAPHCKTAGSF*ATPRIPGMEVK Trigger: CTTCACTTCCATACCTGGGATTCGGGGCGTGGCCCAGAAAGACCCTGCAGTCTTGCAGTGTGGGGCTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS CAA 72 bp | GGTGGAGGAAGGAACTCCGATGAGACTCAACAGGGCTaGCTGGGGCCGGAGGGTGAGGGCGAATGGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: GGGRNSDETQQG*LGPEGEGEWQT Trigger: TGTTTGCCATTCGCCCTCACCCTCCGGCCCCAGCAAGCCCTGTTGAGTCTCATCGGAGTTCCTTCCTCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS CAA 90 bp | CTATCCCTTGGTGGAGGAAGGAACTCCGATGAGACTCAACAGGGCTaGCTGGGGCCGGAGGGTGAGGGCGAATGGCAAACAGCATGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LSLGGGRNSDETQQG*LGPEGEGEWQTAWG Trigger: TCCCCATGCTGTTTGCCATTCGCCCTCACCCTCCGGCCCCAGCAAGCCCTGTTGAGTCTCATCGGAGTTCCTTCCTCCACCAAGGGATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS TCA 72 bp | CGCTGGGAAGTCCAAGGTCAAGGGGCCCACATCTGGTaGGGGCCTTCTTGCTGCATCATCCCATGGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RWEVQGQGAHIW*GPSCCIIPWWK Trigger: CTTCCACCATGGGATGATGCAGCAAGAAGGCCCTCACCAGATGTGGGCCCCTTGACCTTGGACTTCCCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668238.1 |
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| CDS CCA 72 bp | GAGGAAGGAACTCCGATGAGACTCAACAGGGCTTGCTaGGGCCGGAGGGTGAGGGCGAATGGCAAACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: EEGTPMRLNRAC*GRRVRANGKQH Trigger: ATGCTGTTTGCCATTCGCCCTCACCCTCCGGCCCCAGCAAGCCCTGTTGAGTCTCATCGGAGTTCCTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS CCA 72 bp | GAGGGCCTTCTTGCTGCATCATCCCATGGTGGAAGGTaGACGGGCAAGAGGGCATGCTTGCCTCTTCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: EGLLAASSHGGR*TGKRACLPLPL Trigger: CAAGGGAAGAGGCAAGCATGCCCTCTTGCCCGTCCACCTTCCACCATGGGATGATGCAGCAAGAAGGCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668238.1 |
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| CDS GCA 72 bp | CACAGTGGTGAATGTCTTTCTGGACAAGAGTGCCAGTaGCCACCGCCATCACAGGACACAGCCCCATCCGCA | + |
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Preference number: 6 (lower is better) Translates to: HSGECLSGQECQ*PPPSQDTAPSA Trigger: TGCGGATGGGGCTGTGTCCTGTGATGGCGGTGGGCACTGGCACTCTTGTCCAGAAAGACATTCACCACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS TCA 72 bp | ATCCTGGGTGGTTGGAGGAATTCTAGCAGTGAGAGTTaGAAACCGCTCGGCGCGCGGCAAGAGAGGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: ILGGWRNSSSES*KPLGARQERMK Trigger: CTTCATCCTCTCTTGCCGCGCGCCGAGCGGTTTTCAACTCTCACTGCTAGAATTCCTCCAACCACCCAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000571219.1 ENST00000653156.1 ENST00000654253.1 ENST00000654349.1 ENST00000655561.1 ENST00000657680.1 ENST00000657697.1 ENST00000658101.1 ENST00000658831.1 ENST00000665669.1 ENST00000666471.1 ENST00000667339.1 ENST00000668238.1 ENST00000670692.1 |
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| CDS GCA 72 bp | TTGAACCACAGTGGTGAATGTCTTTCTGGACAAGAGTaGCAGTGCCCACCGCCATCACAGGACACAGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LNHSGECLSGQE*QCPPPSQDTAP Trigger: TGGGGCTGTGTCCTGTGATGGCGGTGGGCACTGGCACTCTTGTCCAGAAAGACATTCACCACTGTGGTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS CCA 72 bp | CAGGAAAATGGGACAGAAAATGAGCCAAGCGCTGGATaGCAGCGTTCATTCAGCCCAGCTGAGCTTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: QENGTENEPSAG*QRSFSPAELGG Trigger: GCCTCCAAGCTCAGCTGGGCTGAATGAACGCTGCCATCCAGCGCTTGGCTCATTTTCTGTCCCATTTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS CCA 72 bp | CTGGGGCCGGAGGGTGAGGGCGAATGGCAAACAGCATaGGGAACTTTTTGGATGATGGAAACGTTCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LGPEGEGEWQTA*GTFWMMETFSV Trigger: GACACTGAACGTTTCCATCATCCAAAAAGTTCCCCATGCTGTTTGCCATTCGCCCTCACCCTCCGGCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS CAA 90 bp | CACAGGACACAGCCCCATCCGCACTCCCGGGACAGCAACATCTCATaGTCCCAAACTCTGCCAATTTCATCAGTGAAAAGTGGAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HRTQPHPHSRDSNIS*SQTLPISSVKSGAW Trigger: CCAGGCTCCACTTTTCACTGATGAAATTGGCAGAGTTTGGGACAATGAGATGTTGCTGTCCCGGGAGTGCGGATGGGGCTGTGTCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS CAA 90 bp | GGAGTGTCAGTGTCTGCATGCAGCAATCAGGTGAGTTTCTATCCCTaGGTGGAGGAAGGAACTCCGATGAGACTCAACAGGGCTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GVSVSACSNQVSFYP*VEEGTPMRLNRACW Trigger: CCAGCAAGCCCTGTTGAGTCTCATCGGAGTTCCTTCCTCCACCAAGGGATAGAAACTCACCTGATTGCTGCATGCAGACACTGACACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS CCA 72 bp | GGTCATGGGTGGCCATGTATCTCGGTCCTGCTATCCTaGGTGGTTGGAGGAATTCTAGCAGTGAGAGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GHGWPCISVLLS*VVGGILAVRVE Trigger: TTCAACTCTCACTGCTAGAATTCCTCCAACCACCCAGGATAGCAGGACCGAGATACATGGCCACCCATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000571219.1 ENST00000653156.1 ENST00000654253.1 ENST00000654349.1 ENST00000655561.1 ENST00000657497.1 ENST00000657680.1 ENST00000657697.1 ENST00000658101.1 ENST00000658831.1 ENST00000665669.1 ENST00000666471.1 ENST00000667339.1 ENST00000668238.1 ENST00000670692.1 |
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| CDS TCA 72 bp | AGGGCGAATGGCAAACAGCATGGGGAACTTTTTGGATaGTGGAAACGTTCAGTGTCCTCCTCAGGGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: RANGKQHGELFG*WKRSVSSSGYC Trigger: GCAGTACCCTGAGGAGGACACTGAACGTTTCCATCATCCAAAAAGTTCCCCATGCTGTTTGCCATTCGCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS CCA 72 bp | GGTCATCCGAGGAGAGAGGGTGTGTCTGGGGTAGGGTaGAGTAGCTTTCAGAAAAGTGTAAGTCTGGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: GHPRREGVSGVG*SSFQKSVSLAK Trigger: TTTTGCCAGACTTACACTTTTCTGAAAGCTACTCCACCCTACCCCAGACACACCCTCTCTCCTCGGATGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS CCA 72 bp | GGTGAGGGCGAATGGCAAACAGCATGGGGAACTTTTTaGATGATGGAAACGTTCAGTGTCCTCCTCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: GEGEWQTAWGTF*MMETFSVLLRV Trigger: TACCCTGAGGAGGACACTGAACGTTTCCATCATCCAAAAAGTTCCCCATGCTGTTTGCCATTCGCCCTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS CAA 72 bp | GTGTCTGCATGCAGCAATCAGGTGAGTTTCTATCCCTaGGTGGAGGAAGGAACTCCGATGAGACTCAACAGG | + |
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Preference number: 6 (lower is better) Translates to: VSACSNQVSFYP*VEEGTPMRLNR Trigger: CCTGTTGAGTCTCATCGGAGTTCCTTCCTCCACCAAGGGATAGAAACTCACCTGATTGCTGCATGCAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657497.1 ENST00000657697.1 ENST00000660807.1 |
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| CDS CAA 72 bp | GAGGCTAGTGATCTAAACTCAGACCCACATCTGAGCTaGGTCCAGCCTCAAGGCTTAATCCAGCACTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: EASDLNSDPHLS*VQPQGLIQHSY Trigger: GTAAGAGTGCTGGATTAAGCCTTGAGGCTGGACCAAGCTCAGATGTGGGTCTGAGTTTAGATCACTAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658831.1 ENST00000670692.1 |
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| CDS GCA 72 bp | GACTGGCGTCAGTGTTCAAGATTTAGCAGGAATCTGTaGCTTTTTCAGACTCAGGAGTCAAAGCCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: DWRQCSRFSRNL*LFQTQESKPSS Trigger: GGAAGAGGGCTTTGACTCCTGAGTCTGAAAAAGGCACAGATTCCTGCTAAATCTTGAACACTGACGCCAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654349.1 |
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| CDS GCA 72 bp | CCTGCCATCTGGTACCCACAAAAGACACCGGTCAGATaGATATGTCACATTTCAAAGGCTGCTCTTCCTAGA | + |
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Preference number: 6 (lower is better) Translates to: PAIWYPQKTPVR*ICHISKAALPR Trigger: TCTAGGAAGAGCAGCCTTTGAAATGTGACATATGCATCTGACCGGTGTCTTTTGTGGGTACCAGATGGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660807.1 |
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| CDS CAA 72 bp | GGCTTCAGTAGTTACTTCGTTTTGCCCTTCCCTACCTaGACTACCTTCTTGGAAACCACAGGTCTAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GFSSYFVLPFPT*TTFLETTGLRG Trigger: GCCTCTTAGACCTGTGGTTTCCAAGAAGGTAGTCAAGGTAGGGAAGGGCAAAACGAAGTAACTACTGAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658831.1 ENST00000670692.1 |
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| CDS GCA 72 bp | GACTGGCGTCAGTGTTCAAGATTTAGCAGGAATCTGTaGCTTTTTCAGACTCAGGAGTCAAAGCCCTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: DWRQCSRFSRNL*LFQTQESKPCN Trigger: GTTACAGGGCTTTGACTCCTGAGTCTGAAAAAGGCACAGATTCCTGCTAAATCTTGAACACTGACGCCAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000653156.1 ENST00000655561.1 ENST00000657680.1 ENST00000665669.1 ENST00000666471.1 |
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| CDS CAA 72 bp | CAGGAAAATTGTTATTCCGACACAGGGGCCAGACGCTaGCCTGGCCTCAGTGTGCCTTTGATATTAATGTTT | + |
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Preference number: 6 (lower is better) Translates to: QENCYSDTGARR*PGLSVPLILMF Trigger: AAACATTAATATCAAAGGCACACTGAGGCCAGGCAAGCGTCTGGCCCCTGTGTCGGAATAACAATTTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654349.1 ENST00000655561.1 ENST00000665669.1 |
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| CDS CAA 90 bp | GGTGGCTTTGAGGCTAGTGATCTAAACTCAGACCCACATCTGAGCTaGGTCCAGCCTCAAGGCTTAATCCAGCACTCTTACTTTAATTTT | + |
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Preference number: 6 (lower is better) Translates to: GGFEASDLNSDPHLS*VQPQGLIQHSYFNF Trigger: AAAATTAAAGTAAGAGTGCTGGATTAAGCCTTGAGGCTGGACCAAGCTCAGATGTGGGTCTGAGTTTAGATCACTAGCCTCAAAGCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658831.1 ENST00000670692.1 |
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| CDS CAA 90 bp | CACTTCCTTCACATCACACCATTTGGCTTCAGTAGTTACTTCGTTTaGCCCTTCCCTACCTTGACTACCTTCTTGGAAACCACAGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: HFLHITPFGFSSYFV*PFPTLTTFLETTGL Trigger: TAGACCTGTGGTTTCCAAGAAGGTAGTCAAGGTAGGGAAGGGCAAAACGAAGTAACTACTGAAGCCAAATGGTGTGATGTGAAGGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658831.1 ENST00000670692.1 |
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| CDS TCA 72 bp | AGTTTCACCATTTTAGCCAGGCTAATCTCAAATTCCTaGACTCAAATGATCTGCCTGCCTGGTCTCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SFTILARLISNS*TQMICLPGLSL Trigger: GAGGCTGAGACCAGGCAGGCAGATCATTTGAGTTCAGGAATTTGAGATTAGCCTGGCTAAAATGGTGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655561.1 |
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| CDS CCA 72 bp | AAATTGTTATTCCGACACAGGGGCCAGACGCTTGCCTaGCCTCAGTGTGCCTTTGATATTAATGTTTACAAA | + |
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Preference number: 6 (lower is better) Translates to: KLLFRHRGQTLA*PQCAFDINVYK Trigger: TTTGTAAACATTAATATCAAAGGCACACTGAGGCCAGGCAAGCGTCTGGCCCCTGTGTCGGAATAACAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654349.1 ENST00000655561.1 ENST00000665669.1 |
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| CDS TCA 72 bp | GGATTGAATACTTGTAATTACTGGCCCTGCGTCTCATaGAAGCATTTCATTTCGATTGTCACCTTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GLNTCNYWPCVS*KHFISIVTFSQ Trigger: CTGGGAGAAGGTGACAATCGAAATGAAATGCTTTCATGAGACGCAGGGCCAGTAATTACAAGTATTCAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000653156.1 ENST00000654349.1 ENST00000655561.1 ENST00000665669.1 |
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| CDS CAA 72 bp | TCTACAAAAGGGAACACTTCCTTCACATCACACCATTaGGCTTCAGTAGTTACTTCGTTTTGCCCTTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: STKGNTSFTSHH*ASVVTSFCPSL Trigger: TAGGGAAGGGCAAAACGAAGTAACTACTGAAGCCAAATGGTGTGATGTGAAGGAAGTGTTCCCTTTTGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658831.1 ENST00000670692.1 |
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| CDS GCA 72 bp | CAGGAATTTGATCCATCTTTAAATTCCACTGGTTCTTaGAATGGCTTTCTGAAGTTCCTCACCTCTTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: QEFDPSLNSTGS*NGFLKFLTSSL Trigger: AAGGGAAGAGGTGAGGAACTTCAGAAAGCCATTGCAAGAACCAGTGGAATTTAAAGATGGATCAAATTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658831.1 |
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| CDS CAA 90 bp | CAGTTCAGTCCTCTATTAGCTCAGTCCATGCAATTAACTCTTGTTTaGCTTCATACTGGGTTAGCAATCTTTATGACCACATCAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: QFSPLLAQSMQLTLV*LHTGLAIFMTTSAF Trigger: AAAGGCTGATGTGGTCATAAAGATTGCTAACCCAGTATGAAGCAAAACAAGAGTTAATTGCATGGACTGAGCTAATAGAGGACTGAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653156.1 ENST00000657680.1 ENST00000666471.1 |
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| CDS TCA 72 bp | TGGTCTCACAGATTTCCTGGTCATCGGTATTTCATCTaGAAAGTCTCTTTCTGTGATATCTGCTCATTAGAG | + |
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Preference number: 6 (lower is better) Translates to: WSHRFPGHRYFI*KVSFCDICSLE Trigger: CTCTAATGAGCAGATATCACAGAAAGAGACTTTTCAGATGAAATACCGATGACCAGGAAATCTGTGAGACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571219.1 ENST00000654253.1 ENST00000658101.1 ENST00000667339.1 |
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| CDS TCA 72 bp | GTAATGCCGGGGAAGAAAACTTTATTATATTATGGTTaGCATCAGCCCAAGAGAACAGGAGATCAGTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: VMPGKKTLLYYG*HQPKRTGDQSQ Trigger: TTGAGACTGATCTCCTGTTCTCTTGGGCTGATGTCAACCATAATATAATAAAGTTTTCTTCCCCGGCATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660807.1 |
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| CDS CAA 72 bp | AGCCACTGTAGCCGGCCAGAAGTTGAAATCTTGATGTaGGGAAGTTCATCAGTCGAATATCAAAAGTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: SHCSRPEVEILM*GSSSVEYQKFK Trigger: TTTAAACTTTTGATATTCGACTGATGAACTTCCCAACATCAAGATTTCAACTTCTGGCCGGCTACAGTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655561.1 |
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| CDS CAA 72 bp | CCTCTATTAGCTCAGTCCATGCAATTAACTCTTGTTTaGCTTCATACTGGGTTAGCAATCTTTATGACCACA | + |
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Preference number: 6 (lower is better) Translates to: PLLAQSMQLTLV*LHTGLAIFMTT Trigger: TGTGGTCATAAAGATTGCTAACCCAGTATGAAGCAAAACAAGAGTTAATTGCATGGACTGAGCTAATAGAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653156.1 ENST00000657680.1 ENST00000666471.1 |
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| CDS CCA 72 bp | TCAGTCCATGCAATTAACTCTTGTTTTGCTTCATACTaGGTTAGCAATCTTTATGACCACATCAGCCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: SVHAINSCFASY*VSNLYDHISLL Trigger: TAAAAGGCTGATGTGGTCATAAAGATTGCTAACCCAGTATGAAGCAAAACAAGAGTTAATTGCATGGACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653156.1 ENST00000657680.1 ENST00000666471.1 |
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