RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02174 (Homo sapiens)

Ensembl gene IDs: ENSG00000249297

Ensembl transcript IDs: ENST00000508977.1, ENST00000651666.1

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GTACCTTCAGAGCAATCAACACAGCAGAAGGTAAGTACGGTGTCATaGTGTACGAAGGCATTTGCCAGCATTGCTGGTGACCACGAGCCA +
Preference number: 5 (lower is better)
Translates to: VPSEQSTQQKVSTVS*CTKAFASIAGDHEP
Trigger: TGGCTCGTGGTCACCAGCAATGCTGGCAAATGCCTTCGTACAGCATGACACCGTACTTACCTTCTGCTGTGTTGATTGCTCTGAAGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS GCA 90 bp AGGACTCAGCATAGAGTTAAGAGTCTGGAACTTGGAGGAGAGCCATaGTGGCAGCTTGATTTTGGACTTCCAGGCTTGAGAATTGTGAAA +
Preference number: 5 (lower is better)
Translates to: RTQHRVKSLELGGEP*WQLDFGLPGLRIVK
Trigger: TTTCACAATTCTCAAGCCTGGAAGTCCAAAATCAAGCTGCCAGCATGGCTCTCCTCCAAGTTCCAGACTCTTAACTCTATGCTGAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS CCA 90 bp ACTCAGCATAGAGTTAAGAGTCTGGAACTTGGAGGAGAGCCATGCTaGCAGCTTGATTTTGGACTTCCAGGCTTGAGAATTGTGAAAAAT +
Preference number: 5 (lower is better)
Translates to: TQHRVKSLELGGEPC*QLDFGLPGLRIVKN
Trigger: ATTTTTCACAATTCTCAAGCCTGGAAGTCCAAAATCAAGCTGCCAGCATGGCTCTCCTCCAAGTTCCAGACTCTTAACTCTATGCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS TCA 72 bp GTCATGCTGTACGAAGGCATTTGCCAGCATTGCTGGTaGCCACGAGCCATGACCATTGCATGCTGTTCAGGC +
Preference number: 6 (lower is better)
Translates to: VMLYEGICQHCW*PRAMTIACCSG
Trigger: GCCTGAACAGCATGCAATGGTCATGGCTCGTGGTCACCAGCAATGCTGGCAAATGCCTTCGTACAGCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS CCA 72 bp GCATTCAACAAGCCAGATGGTCTTGACCCAAAGCTATaGGATGGGACCTTCCCCAGTGGACCTGAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: AFNKPDGLDPKL*DGTFPSGPERQ
Trigger: CTGCCTTTCAGGTCCACTGGGGAAGGTCCCATCCCATAGCTTTGGGTCAAGACCATCTGGCTTGTTGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS CAA 90 bp CATGTCAGGATTCTGGGATCTCTCCCCCGAAGCTATGGAGCCCTTTaGACTCTGGAGTCCTGTAATCCCAGCTACTTGAGAGCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: HVRILGSLPRSYGAL*TLESCNPSYLRARG
Trigger: ACCTCTGGCTCTCAAGTAGCTGGGATTACAGGACTCCAGAGTCAAAAGGGCTCCATAGCTTCGGGGGAGAGATCCCAGAATCCTGACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS TCA 72 bp CCCAAAGCTATGGGATGGGACCTTCCCCAGTGGACCTaGAAGGCAGAGCCTCAAACCAAAAAGTGTTACTCA +
Preference number: 6 (lower is better)
Translates to: PKAMGWDLPQWT*KAEPQTKKCYS
Trigger: TGAGTAACACTTTTTGGTTTGAGGCTCTGCCTTTCAGGTCCACTGGGGAAGGTCCCATCCCATAGCTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS CAA 72 bp ATTCTGGGATCTCTCCCCCGAAGCTATGGAGCCCTTTaGACTCTGGAGTCCTGTAATCCCAGCTACTTGAGA +
Preference number: 6 (lower is better)
Translates to: ILGSLPRSYGAL*TLESCNPSYLR
Trigger: TCTCAAGTAGCTGGGATTACAGGACTCCAGAGTCAAAAGGGCTCCATAGCTTCGGGGGAGAGATCCCAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS GCA 72 bp GAGCAATCAACACAGCAGAAGGTAAGTACGGTGTCATaGTGTACGAAGGCATTTGCCAGCATTGCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: EQSTQQKVSTVS*CTKAFASIAGD
Trigger: GTCACCAGCAATGCTGGCAAATGCCTTCGTACAGCATGACACCGTACTTACCTTCTGCTGTGTTGATTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS CAA 72 bp TTGCCAGGACTCAGCATAGAGTTAAGAGTCTGGAACTaGGAGGAGAGCCATGCTGGCAGCTTGATTTTGGAC +
Preference number: 6 (lower is better)
Translates to: LPGLSIELRVWN*EESHAGSLILD
Trigger: GTCCAAAATCAAGCTGCCAGCATGGCTCTCCTCCAAGTTCCAGACTCTTAACTCTATGCTGAGTCCTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS GCA 72 bp CATAGAGTTAAGAGTCTGGAACTTGGAGGAGAGCCATaGTGGCAGCTTGATTTTGGACTTCCAGGCTTGAGA +
Preference number: 6 (lower is better)
Translates to: HRVKSLELGGEP*WQLDFGLPGLR
Trigger: TCTCAAGCCTGGAAGTCCAAAATCAAGCTGCCAGCATGGCTCTCCTCCAAGTTCCAGACTCTTAACTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS TCA 72 bp GACGCCCTATTTGATGGCTATTTTCTCCTCTGTTCCTaGCTTGAGACTCCTTGGCAGGCATGCTTGAGATTT +
Preference number: 6 (lower is better)
Translates to: DALFDGYFLLCS*LETPWQACLRF
Trigger: AAATCTCAAGCATGCCTGCCAAGGAGTCTCAAGTCAGGAACAGAGGAGAAAATAGCCATCAAATAGGGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508977.1
CDS TCA 72 bp GAGTCTGGAACTTGGAGGAGAGCCATGCTGGCAGCTTaGTTTTGGACTTCCAGGCTTGAGAATTGTGAAAAA +
Preference number: 6 (lower is better)
Translates to: ESGTWRRAMLAA*FWTSRLENCEK
Trigger: TTTTTCACAATTCTCAAGCCTGGAAGTCCAAAATCAAGCTGCCAGCATGGCTCTCCTCCAAGTTCCAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS TCA 72 bp AGTTTGAAATCTAACTGCCATATTCTCTGGGCCCCATaGGAGAAGGGAGCACACTTTCTCAGTTTAGGATGG +
Preference number: 6 (lower is better)
Translates to: SLKSNCHILWAP*EKGAHFLSLGW
Trigger: CCATCCTAAACTGAGAAAGTGTGCTCCCTTCTCTCATGGGGCCCAGAGAATATGGCAGTTAGATTTCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS GCA 72 bp AATATCAACTTTTCAACCATTAAATGCCTTGCCCTTTaGTGGCATGTCAGGATTCTGGGATCTCTCCCCCGA +
Preference number: 6 (lower is better)
Translates to: NINFSTIKCLAL*WHVRILGSLPR
Trigger: TCGGGGGAGAGATCCCAGAATCCTGACATGCCAGCAAAGGGCAAGGCATTTAATGGTTGAAAAGTTGATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS CCA 72 bp GATCTGAAGTGTAGAAAGATGGAAATCACAAGACTATaGAGACTTGCAAACATTCACCAGCAGTACCTTCAG +
Preference number: 6 (lower is better)
Translates to: DLKCRKMEITRL*RLANIHQQYLQ
Trigger: CTGAAGGTACTGCTGGTGAATGTTTGCAAGTCTCCATAGTCTTGTGATTTCCATCTTTCTACACTTCAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS CAA 72 bp AGTGTAGAAAGATGGAAATCACAAGACTATGGAGACTaGCAAACATTCACCAGCAGTACCTTCAGAGCAATC +
Preference number: 6 (lower is better)
Translates to: SVERWKSQDYGD*QTFTSSTFRAI
Trigger: GATTGCTCTGAAGGTACTGCTGGTGAATGTTTGCAAGTCTCCATAGTCTTGTGATTTCCATCTTTCTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS CAA 72 bp GAAGGATATAACTTGTTTGGTTCCACAGGATCTCAGTaGGAGAGCAATTTTCCTCAGGTTGAAATGTATTTA +
Preference number: 6 (lower is better)
Translates to: EGYNLFGSTGSQ*ESNFPQVEMYL
Trigger: TAAATACATTTCAACCTGAGGAAAATTGCTCTCCAACTGAGATCCTGTGGAACCAAACAAGTTATATCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS CAA 90 bp TCTATCTTATTCCTAACCCATTATTGTATTTTGGAAGGATATAACTaGTTTGGTTCCACAGGATCTCAGTTGGAGAGCAATTTTCCTCAG +
Preference number: 6 (lower is better)
Translates to: SILFLTHYCILEGYN*FGSTGSQLESNFPQ
Trigger: CTGAGGAAAATTGCTCTCCAACTGAGATCCTGTGGAACCAAACAAGTTATATCCTTCCAAAATACAATAATGGGTTAGGAATAAGATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651666.1
CDS CAA 90 bp TGTATTTTGGAAGGATATAACTTGTTTGGTTCCACAGGATCTCAGTaGGAGAGCAATTTTCCTCAGGTTGAAATGTATTTAGTCTCAAAT +
Preference number: 6 (lower is better)
Translates to: CILEGYNLFGSTGSQ*ESNFPQVEMYLVSN
Trigger: ATTTGAGACTAAATACATTTCAACCTGAGGAAAATTGCTCTCCAACTGAGATCCTGTGGAACCAAACAAGTTATATCCTTCCAAAATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651666.1