Pregenerated sensors for LINC02173 (Homo sapiens)

Ensembl gene IDs: ENSG00000249613

Ensembl transcript IDs: ENST00000504132.1, ENST00000654498.1, ENST00000667859.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	ATTCTGAGCCATTCTCTCCAGCAGTTAAATATGTTTGAAGAATTGTaGCTCTCTCATGACACGACAGCCCAGCCTCCTTTTCTGACCAAA	+
Preference number: 5 (lower is better) Translates to: ILSHSLQQLNMFEEL*LSHDTTAQPPFLTK Trigger: TTTGGTCAGAAAAGGAGGCTGGGCTGTCGTGTCATGAGAGAGCCACAATTCTTCAAACATATTTAACTGCTGGAGAGAATGGCTCAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667859.1
CDS GCA 72 bp	GTCAACTCTTCCTTCAGTTCTGGGACTGTTGATCCCTaGCTGTGTATTACCATCCATCACCCCTGTTCTTCA	+
Preference number: 6 (lower is better) Translates to: VNSSFSSGTVDP*LCITIHHPCSS Trigger: TGAAGAACAGGGGTGATGGATGGTAATACACAGGCAGGGATCAACAGTCCCAGAACTGAAGGAAGAGTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000504132.1 ENST00000654498.1 ENST00000667859.1
CDS TCA 72 bp	TACATTTGTCAACTCTTCCTTCAGTTCTGGGACTGTTaGTCCCTGCCTGTGTATTACCATCCATCACCCCTG	+
Preference number: 6 (lower is better) Translates to: YICQLFLQFWDC*SLPVYYHPSPL Trigger: CAGGGGTGATGGATGGTAATACACAGGCAGGGATCAACAGTCCCAGAACTGAAGGAAGAGTTGACAAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000504132.1 ENST00000654498.1 ENST00000667859.1
CDS CCA 72 bp	AAGGGCCAAGAAGAGATGTGTGCTGAAGCTGATACCTaGGATTCTGAGCCATTCTCTCCAGCAGTTAAATAT	+
Preference number: 6 (lower is better) Translates to: KGQEEMCAEADT*DSEPFSPAVKY Trigger: ATATTTAACTGCTGGAGAGAATGGCTCAGAATCCCAGGTATCAGCTTCAGCACACATCTCTTCTTGGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667859.1
CDS CCA 72 bp	CATTCTCTCCAGCAGTTAAATATGTTTGAAGAATTGTaGCTCTCTCATGACACGACAGCCCAGCCTCCTTTT	+
Preference number: 6 (lower is better) Translates to: HSLQQLNMFEEL*LSHDTTAQPPF Trigger: AAAAGGAGGCTGGGCTGTCGTGTCATGAGAGAGCCACAATTCTTCAAACATATTTAACTGCTGGAGAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667859.1
CDS CCA 72 bp	TTTCTTATATTTTATCTGTGTGCTGAAGCTGATACCTaGGATTCTGAGCCATTCTCTCCAGCAGTTAAATAT	+
Preference number: 6 (lower is better) Translates to: FLIFYLCAEADT*DSEPFSPAVKY Trigger: ATATTTAACTGCTGGAGAGAATGGCTCAGAATCCCAGGTATCAGCTTCAGCACACAGATAAAATATAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504132.1 ENST00000654498.1

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