Pregenerated sensors for LINC02162 (Homo sapiens)

Ensembl gene IDs: ENSG00000249830

Ensembl transcript IDs: ENST00000512521.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GACAGCTTCCTCTGGCTTGGGGACTCTACTCCTTTAGATGAGAGCTaGGTAGAACATCATCCAAGTCAACTTCTCAGAGCTTGGTGTTGG	+
Preference number: 5 (lower is better) Translates to: DSFLWLGDSTPLDES*VEHHPSQLLRAWCW Trigger: CCAACACCAAGCTCTGAGAAGTTGACTTGGATGATGTTCTACCCAGCTCTCATCTAAAGGAGTAGAGTCCCCAAGCCAGAGGAAGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512521.1
CDS CCA 90 bp	GATGAGAGCTGGGTAGAACATCATCCAAGTCAACTTCTCAGAGCTTaGTGTTGGTTGCGGACCTTCATTCTTTCTTTCCTTGTGACAGCC	+
Preference number: 5 (lower is better) Translates to: DESWVEHHPSQLLRA*CWLRTFILSFLVTA Trigger: GGCTGTCACAAGGAAAGAAAGAATGAAGGTCCGCAACCAACACCAAGCTCTGAGAAGTTGACTTGGATGATGTTCTACCCAGCTCTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512521.1
CDS TCA 72 bp	CAGCTTCCTCTGGCTTGGGGACTCTACTCCTTTAGATaGGAGCTGGGTAGAACATCATCCAAGTCAACTTCT	+
Preference number: 6 (lower is better) Translates to: QLPLAWGLYSFR*ELGRTSSKSTS Trigger: AGAAGTTGACTTGGATGATGTTCTACCCAGCTCTCATCTAAAGGAGTAGAGTCCCCAAGCCAGAGGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512521.1
CDS CCA 72 bp	CTCTGGCTTGGGGACTCTACTCCTTTAGATGAGAGCTaGGTAGAACATCATCCAAGTCAACTTCTCAGAGCT	+
Preference number: 6 (lower is better) Translates to: LWLGDSTPLDES*VEHHPSQLLRA Trigger: AGCTCTGAGAAGTTGACTTGGATGATGTTCTACCCAGCTCTCATCTAAAGGAGTAGAGTCCCCAAGCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512521.1
CDS CCA 72 bp	TGGGTAGAACATCATCCAAGTCAACTTCTCAGAGCTTaGTGTTGGTTGCGGACCTTCATTCTTTCTTTCCTT	+
Preference number: 6 (lower is better) Translates to: WVEHHPSQLLRA*CWLRTFILSFL Trigger: AAGGAAAGAAAGAATGAAGGTCCGCAACCAACACCAAGCTCTGAGAAGTTGACTTGGATGATGTTCTACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512521.1
CDS CCA 72 bp	CTCTGTCAAGCTTCTGTAACTGGCATCATTAACCTTTaGGACCTCATAGAATCTTCACAGCTGAGAAGCTCT	+
Preference number: 6 (lower is better) Translates to: LCQASVTGIINL*DLIESSQLRSS Trigger: AGAGCTTCTCAGCTGTGAAGATTCTATGAGGTCCCAAAGGTTAATGATGCCAGTTACAGAAGCTTGACAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512521.1

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