Pregenerated sensors for LINC02161 (Homo sapiens)

Ensembl gene IDs: ENSG00000250437

Ensembl transcript IDs: ENST00000503691.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GCCAGGAAGTCTCAGAGGTTCACTCAGTCCCCTCGATGTAGTGCCTaGTTGTCACTGCTGGTTAACCAAGGGTCCAATAGCTCTTCAGTT	+
Preference number: 5 (lower is better) Translates to: ARKSQRFTQSPRCSA*LSLLVNQGSNSSSV Trigger: AACTGAAGAGCTATTGGACCCTTGGTTAACCAGCAGTGACAACCAGGCACTACATCGAGGGGACTGAGTGAACCTCTGAGACTTCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503691.1
CDS CCA 72 bp	CAAATGTCATCTGTGAGCTGGGGCCTTAGTTCGCAGTaGGCCCATTCATATCTGCTCTTGTCCTCTTCATGT	+
Preference number: 6 (lower is better) Translates to: QMSSVSWGLSSQ*AHSYLLLSSSC Trigger: ACATGAAGAGGACAAGAGCAGATATGAATGGGCCCACTGCGAACTAAGGCCCCAGCTCACAGATGACATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503691.1
CDS GCA 72 bp	CTTGTCCTCTTCATGTCCATTCTCTTGAAGAGCAGCTaGATTAATGTAGCTGTGGATTTTAGAATAAAATCC	+
Preference number: 6 (lower is better) Translates to: LVLFMSILLKSS*INVAVDFRIKS Trigger: GGATTTTATTCTAAAATCCACAGCTACATTAATGCAGCTGCTCTTCAAGAGAATGGACATGAAGAGGACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503691.1

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