Pregenerated sensors for LINC02154 (Homo sapiens)
Ensembl gene IDs: ENSG00000235385Ensembl transcript IDs: ENST00000412485.1, ENST00000443965.1, ENST00000670053.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCTACCAGCACTTGGGCCACAGTTTGAGTACAGTTCCACATGGCTaGGGAGGCCTCACAATCACGGCAGAAGACAAAGGAAGACCAAAG | + |
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Preference number: 5 (lower is better) Translates to: CYQHLGHSLSTVPHG*GGLTITAEDKGRPK Trigger: CTTTGGTCTTCCTTTGTCTTCTGCCGTGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTACTCAAACTGTGGCCCAAGTGCTGGTAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412485.1 |
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| CDS CCA 90 bp | CTAATGCTACCAGCACTTGGGCCACAGTTTGAGTACAGTTCCACATaGCTGGGGAGGCCTCACAATCACGGCAGAAGACAAAGGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: LMLPALGPQFEYSST*LGRPHNHGRRQRKT Trigger: GGTCTTCCTTTGTCTTCTGCCGTGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTACTCAAACTGTGGCCCAAGTGCTGGTAGCATTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412485.1 |
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| CDS TCA 90 bp | CAGAGCAGGCTGAGCCGCTGTACAGAGTTGAGATTGTTGACCCACTaGTTGTGCCTGAAAGGCTTTTCAGCCACACAAAACCCTGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: QSRLSRCTELRLLTH*LCLKGFSATQNPGL Trigger: AAGCCCAGGGTTTTGTGTGGCTGAAAAGCCTTTCAGGCACAATCAGTGGGTCAACAATCTCAACTCTGTACAGCGGCTCAGCCTGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000412485.1 ENST00000443965.1 ENST00000670053.1 |
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| CDS CCA 90 bp | GACCCACTGATTGTGCCTGAAAGGCTTTTCAGCCACACAAAACCCTaGGCTTCCTCATTAGCATATCAGAGGTGGCGCAGTGGTGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: DPLIVPERLFSHTKP*ASSLAYQRWRSGGK Trigger: TTTCCCACCACTGCGCCACCTCTGATATGCTAATGAGGAAGCCCAGGGTTTTGTGTGGCTGAAAAGCCTTTCAGGCACAATCAGTGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000412485.1 ENST00000443965.1 ENST00000670053.1 |
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| CDS CCA 90 bp | TTCAGCCACACAAAACCCTGGGCTTCCTCATTAGCATATCAGAGGTaGCGCAGTGGTGGGAAATACTGCAGGCAACAAAGAATGTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: FSHTKPWASSLAYQR*RSGGKYCRQQRMWF Trigger: GAACCACATTCTTTGTTGCCTGCAGTATTTCCCACCACTGCGCCACCTCTGATATGCTAATGAGGAAGCCCAGGGTTTTGTGTGGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412485.1 ENST00000443965.1 ENST00000670053.1 |
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| CDS CCA 90 bp | ATCACGGCAGAAGACAAAGGAAGACCAAAGGGACTTCTTACATGGTaGCAGGCAAGAGAGGGAGCTTGTGCAGGGGAACTCCTCTTTATA | + |
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Preference number: 5 (lower is better) Translates to: ITAEDKGRPKGLLTW*QAREGACAGELLFI Trigger: TATAAAGAGGAGTTCCCCTGCACAAGCTCCCTCTCTTGCCTGCCACCATGTAAGAAGTCCCTTTGGTCTTCCTTTGTCTTCTGCCGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443965.1 |
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| CDS GCA 90 bp | GCTTCCTCATTAGCATATCAGAGGTGGCGCAGTGGTGGGAAATACTaGAGGCAACAAAGAATGTGGTTCAGTGGCATTGTCTCATTGGTG | + |
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Preference number: 5 (lower is better) Translates to: ASSLAYQRWRSGGKY*RQQRMWFSGIVSLV Trigger: CACCAATGAGACAATGCCACTGAACCACATTCTTTGTTGCCTGCAGTATTTCCCACCACTGCGCCACCTCTGATATGCTAATGAGGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412485.1 ENST00000443965.1 ENST00000670053.1 |
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| CDS CCA 90 bp | AAAACCCTGGGCTTCCTCATTAGCATATCAGAGGTGGCGCAGTGGTaGGAAATACTGCAGGCAACAAAGAATGTGGTTCAGTGGCATTGT | + |
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Preference number: 5 (lower is better) Translates to: KTLGFLISISEVAQW*EILQATKNVVQWHC Trigger: ACAATGCCACTGAACCACATTCTTTGTTGCCTGCAGTATTTCCCACCACTGCGCCACCTCTGATATGCTAATGAGGAAGCCCAGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412485.1 ENST00000443965.1 ENST00000670053.1 |
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| CDS CCA 90 bp | TTACTACAAACCGGTGCCACTGGGTCATTTTTAGATTCAGACCATTaGTTAGTGGCTTCTCCCCACAGTGAACCGGACAGTCATGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LLQTGATGSFLDSDH*LVASPHSEPDSHVP Trigger: TGGCACATGACTGTCCGGTTCACTGTGGGGAGAAGCCACTAACCAATGGTCTGAATCTAAAAATGACCCAGTGGCACCGGTTTGTAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000412485.1 ENST00000670053.1 |
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| CDS CCA 90 bp | GGGAGATTTACATCAAGAACCAGCACTATGGAGTCAGAATTTGCATaGAGTTCTATCTTCAAAGTTTTACTACAAACCGGTGCCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: GRFTSRTSTMESEFA*SSIFKVLLQTGATG Trigger: CCCAGTGGCACCGGTTTGTAGTAAAACTTTGAAGATAGAACTCCATGCAAATTCTGACTCCATAGTGCTGGTTCTTGATGTAAATCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412485.1 ENST00000670053.1 |
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| CDS GCA 90 bp | CATTGGGAGATTTACATCAAGAACCAGCACTATGGAGTCAGAATTTaGATGGAGTTCTATCTTCAAAGTTTTACTACAAACCGGTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: HWEIYIKNQHYGVRI*MEFYLQSFTTNRCH Trigger: GTGGCACCGGTTTGTAGTAAAACTTTGAAGATAGAACTCCATGCAAATTCTGACTCCATAGTGCTGGTTCTTGATGTAAATCTCCCAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412485.1 ENST00000670053.1 |
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| CDS GCA 90 bp | AGAATTTGCATGGAGTTCTATCTTCAAAGTTTTACTACAAACCGGTaGCACTGGGTCATTTTTAGATTCAGACCATTGGTTAGTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RICMEFYLQSFTTNR*HWVIFRFRPLVSGF Trigger: GAAGCCACTAACCAATGGTCTGAATCTAAAAATGACCCAGTGGCACCGGTTTGTAGTAAAACTTTGAAGATAGAACTCCATGCAAATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000412485.1 ENST00000670053.1 |
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| CDS CCA 90 bp | GAGCTGAAACGAAGACACAGTTTCAGCTTTAACTTGAACCATGCCTaGAAGGGATTTGTCATTTTTCTCAGACTTGAAAGTCTTATTTGG | + |
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Preference number: 5 (lower is better) Translates to: ELKRRHSFSFNLNHA*KGFVIFLRLESLIW Trigger: CCAAATAAGACTTTCAAGTCTGAGAAAAATGACAAATCCCTTCCAGGCATGGTTCAAGTTAAAGCTGAAACTGTGTCTTCGTTTCAGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000412485.1 ENST00000443965.1 ENST00000670053.1 |
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| CDS CCA 72 bp | CACTTGGGCCACAGTTTGAGTACAGTTCCACATGGCTaGGGAGGCCTCACAATCACGGCAGAAGACAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: HLGHSLSTVPHG*GGLTITAEDKG Trigger: TCCTTTGTCTTCTGCCGTGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTACTCAAACTGTGGCCCAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412485.1 |
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| CDS TCA 72 bp | GTTGATGCTAATGCTACCAGCACTTGGGCCACAGTTTaGGTACAGTTCCACATGGCTGGGGAGGCCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: VDANATSTWATV*VQFHMAGEASQ Trigger: TTGTGAGGCCTCCCCAGCCATGTGGAACTGTACTCAAACTGTGGCCCAAGTGCTGGTAGCATTAGCATCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412485.1 |
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| CDS CCA 72 bp | GAAGACAAAGGAAGACCAAAGGGACTTCTTACATGGTaGCAGGCAAGAGAGGGAGCTTGTGCAGGGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: EDKGRPKGLLTW*QAREGACAGEL Trigger: GAGTTCCCCTGCACAAGCTCCCTCTCTTGCCTGCCACCATGTAAGAAGTCCCTTTGGTCTTCCTTTGTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443965.1 |
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| CDS CCA 72 bp | ACCGGTGCCACTGGGTCATTTTTAGATTCAGACCATTaGTTAGTGGCTTCTCCCCACAGTGAACCGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: TGATGSFLDSDH*LVASPHSEPDS Trigger: ACTGTCCGGTTCACTGTGGGGAGAAGCCACTAACCAATGGTCTGAATCTAAAAATGACCCAGTGGCACCGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000412485.1 ENST00000670053.1 |
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| CDS CCA 72 bp | ACAAAACCCTGGGCTTCCTCATTAGCATATCAGAGGTaGCGCAGTGGTGGGAAATACTGCAGGCAACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: TKPWASSLAYQR*RSGGKYCRQQR Trigger: TCTTTGTTGCCTGCAGTATTTCCCACCACTGCGCCACCTCTGATATGCTAATGAGGAAGCCCAGGGTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412485.1 ENST00000443965.1 ENST00000670053.1 |
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| CDS CAA 72 bp | GGGACTTCTTACATGGTGGCAGGCAAGAGAGGGAGCTaGTGCAGGGGAACTCCTCTTTATAAAACCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: GTSYMVAGKRGS*CRGTPLYKTIR Trigger: TCTGATGGTTTTATAAAGAGGAGTTCCCCTGCACAAGCTCCCTCTCTTGCCTGCCACCATGTAAGAAGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443965.1 |
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| CDS TCA 72 bp | CTGAGCCGCTGTACAGAGTTGAGATTGTTGACCCACTaGTTGTGCCTGAAAGGCTTTTCAGCCACACAAAAC | + |
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Preference number: 6 (lower is better) Translates to: LSRCTELRLLTH*LCLKGFSATQN Trigger: GTTTTGTGTGGCTGAAAAGCCTTTCAGGCACAATCAGTGGGTCAACAATCTCAACTCTGTACAGCGGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000412485.1 ENST00000443965.1 ENST00000670053.1 |
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| CDS CAA 72 bp | CCAGTTACTAATACCATCATAGAGACTGAGTCACTGTaGATGTCACCGCGCCTCTTTGCAGGATCAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: PVTNTIIETESL*MSPRLFAGSAI Trigger: GATGGCTGATCCTGCAAAGAGGCGCGGTGACATCAACAGTGACTCAGTCTCTATGATGGTATTAGTAACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412485.1 ENST00000443965.1 ENST00000670053.1 |
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| CDS CCA 72 bp | CAGGATCAGCCATCTTATTATTTTATAAGTTCCACATaGCTGGGGAGGCCTCACAATCACGGCAGAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: QDQPSYYFISST*LGRPHNHGRRQ Trigger: TTGTCTTCTGCCGTGATTGTGAGGCCTCCCCAGCCATGTGGAACTTATAAAATAATAAGATGGCTGATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000443965.1 ENST00000670053.1 |
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| CDS CAA 90 bp | AGTCAGCTGCCAGTTACTAATACCATCATAGAGACTGAGTCACTGTaGATGTCACCGCGCCTCTTTGCAGGATCAGCCATCTTATTATTT | + |
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Preference number: 6 (lower is better) Translates to: SQLPVTNTIIETESL*MSPRLFAGSAILLF Trigger: AAATAATAAGATGGCTGATCCTGCAAAGAGGCGCGGTGACATCAACAGTGACTCAGTCTCTATGATGGTATTAGTAACTGGCAGCTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412485.1 ENST00000443965.1 ENST00000670053.1 |
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| CDS CAA 90 bp | ACATTGGGAGATTTACATCAAGAACCAGCACTATGGAGTCAGAATTaGCATGGAGTTCTATCTTCAAAGTTTTACTACAAACCGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TLGDLHQEPALWSQN*HGVLSSKFYYKPVP Trigger: TGGCACCGGTTTGTAGTAAAACTTTGAAGATAGAACTCCATGCAAATTCTGACTCCATAGTGCTGGTTCTTGATGTAAATCTCCCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412485.1 ENST00000670053.1 |
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| CDS GCA 72 bp | ATGGAGTTCTATCTTCAAAGTTTTACTACAAACCGGTaGCACTGGGTCATTTTTAGATTCAGACCATTGGTT | + |
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Preference number: 6 (lower is better) Translates to: MEFYLQSFTTNR*HWVIFRFRPLV Trigger: AACCAATGGTCTGAATCTAAAAATGACCCAGTGGCACCGGTTTGTAGTAAAACTTTGAAGATAGAACTCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000412485.1 ENST00000670053.1 |
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| CDS GCA 72 bp | ATTTACATCAAGAACCAGCACTATGGAGTCAGAATTTaGATGGAGTTCTATCTTCAAAGTTTTACTACAAAC | + |
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Preference number: 6 (lower is better) Translates to: IYIKNQHYGVRI*MEFYLQSFTTN Trigger: GTTTGTAGTAAAACTTTGAAGATAGAACTCCATGCAAATTCTGACTCCATAGTGCTGGTTCTTGATGTAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412485.1 ENST00000670053.1 |
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| CDS CAA 72 bp | GATTTACATCAAGAACCAGCACTATGGAGTCAGAATTaGCATGGAGTTCTATCTTCAAAGTTTTACTACAAA | + |
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Preference number: 6 (lower is better) Translates to: DLHQEPALWSQN*HGVLSSKFYYK Trigger: TTTGTAGTAAAACTTTGAAGATAGAACTCCATGCAAATTCTGACTCCATAGTGCTGGTTCTTGATGTAAATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412485.1 ENST00000670053.1 |
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